- Comp-neuro - lists.cnsorg.org

Announcing "Bernstein SmartSteps - Featuring Early Career Scientists"

by Anja Dorrn

The Bernstein SmartSteps<https://www.bernstein-network.de/en/the-network/bernstein-smartsteps/aboutB…> series provides a unique platform for selected Early Career Scientists of the Bernstein Network Computational Neuroscience<https://www.bernstein-network.de/en> to present their research projects to the scientific community. Once a month, starting in April 2021, one PhD candidate and one Postdoc who are ready to take their next (smart) step for their scientific career will discuss their research in an online seminar. Join the Bernstein SmartSteps Series as an audience if you are interested in cutting-edge computational neuroscience and want to watch out for new talents in the field. The live talks will be held in Zoom. A recording will be published in a separate collection on the Bernstein Vimeo Channel. Please register here<https://bit.ly/3e43j5s>, if you would like to join for the live talks. A link to the event in Zoom will be sent shortly before via email. Spring Talks 2021<https://bit.ly/BeSmSt> Thursday, April 29, 4 pm CEST * Gily Ginosar (Ulanovsky lab) | Weizmann Institut, Rehovot, Israel Locally-ordered representation of 3D space in the entorhinal cortex * Friedrich Schuessler (Barak lab) | Technion, Haifa, Israel Recurrent network dynamics lead to interference in sequential learning Thursday, May 20, 4 pm CEST * Claire Meissner-Bernard (Friedrich lab) | Friedrich Miescher Institut, Basel, Schweiz Co-tuned, balanced excitation and inhibition in olfactory memory networks * Samuel Eckmann (Gjorgjieva lab) | Max Planck Institut für Hirnforschung, Frankfurt, Deutschland A theory for Hebbian learning in recurrent E-I networks Thursday, June 10, 4 pm CEST * Paul Pfeiffer (Schreiber lab) | Humboldt Universität zu Berlin, Deutschland Capacitance clamp - artificial capacitance in biological neurons via dynamic clamp * Willem Wybo (Morrison lab) | Forschungszentrum Jülich, Deutschland Data-driven reduction of dendritic morphologies with preserved dendro-somatic responses -- Dr. Anja Dorrn Scientific Coordinator Bernstein Network Computational Neuroscience | Bernstein Coordination Site (BCOS) Branch Office of the Forschungszentrum Jülich at the University of Freiburg Hansastr. 9A | 79104 Freiburg, Germany phone: (+49) 0761 203 9589 web: www.bernstein-network.de<http://www.bernstein-network.de> ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Juelich GmbH 52425 Juelich Sitz der Gesellschaft: Juelich Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Volker Rieke Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender), Karsten Beneke (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt, Prof. Dr. Frauke Melchior ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------

April 16, 2021

CALL FOR WORKSHOPS AND TUTORIALS - 30th Annual Computational Neuroscience Meeting (CNS*2021)

by Martin Zapotocky

**Organization for Computational Neurosciences 2885 Sanford Ave SW #15359 Grandville, MI 49418 USA** ** *Call for Workshops and Tutorials**at the 30th Annual Computational Neuroscience Meeting (CNS*2021 Online, **July 3-7)***** We are requesting proposals for workshops and tutorials from the international community of computational neuroscientists. Proposals from all levels of faculty as well as advanced postdoctoral fellows are welcome. Tutorials are to be held on the first day and workshops on the last two days of the CNS*2021 Meeting <https://www.cnsorg.org/cns-2021-online>. This is an excellent opportunity to reach the large online audience participating in this meeting (with over 1,000 attendees the previous year). Registration for tutorials and workshops is included in the main meeting registration. Please see the links below for detailed information. Questions regarding workshops and tutorials should be addressed to workshops(a)cnsorg.org <mailto:workshops@cnsorg.org> or tutorials(a)cnsorg.org <mailto:tutorials@cnsorg.org>. We are looking forward to your submissions. CALL FOR WORKSHOPS: https://www.cnsorg.org/cns-2021-call-for-workshops <https://www.cnsorg.org/cns-2021-call-for-workshops> Priority Deadline for proposals: *May 15* Jorge Mejias, Workshops Chair for CNS*2021 CALL FOR TUTORIALS: https://ocns.memberclicks.net/cns-2021-call-for-tutorials <https://www.cnsorg.org/cns-2021-call-for-tutorials> Deadline for proposals: *May 15* Anca Doloc-Mihu, Tutorials Chair for CNS*2021 -------------------------------------------------------------------------------------------- OCNS is the international member-based society for computational neuroscientists. Become a member to be eligible for awards and other benefits. Visit our website for more information: https://www.cnsorg.org <https://www.cnsorg.org> -------------------------------------------------------------------------------------------- ------------------------------------------------------------------------ Upozorneni: Neni-li v teto zprave vyslovne uvedeno jinak, ma tato E-mailova zprava nebo jeji prilohy pouze informativni charakter. Tato zprava ani jeji prilohy v zadnem ohledu ustavy AV CR, v.v.i. k nicemu nezavazuji. Text teto zpravy nebo jejich priloh neni navrhem na uzavreni smlouvy, ani prijetim pripadneho navrhu na uzavreni smlouvy, ani jinym pravnim jednanim smerujicim k uzavreni jakekoliv smlouvy a nezaklada predsmluvni odpovednost ustavu AV CR, v.v.i. Disclaimer: If not expressly stated otherwise, this e-mail message (including any attached files) is intended purely for informational purposes and does not represent a binding agreement on the part of Institutes of the Czech Academy of Sciences. The text of this message and its attachments cannot be considered as a proposal to conclude a contract, neither the acceptance of a proposal to conclude a contract, nor any other legal act leading to concluding any contract; nor does it create any pre-contractual liability on the part of Institutes of the Czech Academy of Sciences.

April 15, 2021

Postdoc position available in PET/MRI at MGH, Harvard Medical School

by Wey, Hsiao-Ying

Research Fellow in Simultaneous PET/MR Neuroimaging Athinoula A. Martinos Center for Biomedical Imaging Massachusetts General Hospital Harvard Medical School We are seeking two postdoctoral fellows to join our team to pursue research in simultaneous PET/MR imaging in neuroscience applications. Our research focuses on developing and applying novel PET/MRI methods to investigate the neurochemical underpinnings of psychiatric and neurological disorders. We have projects and training opportunities in the following area: (1) Quantify neuroreceptor dynamics and function with pharmacological challenges in animal models and human subjects, with applications in pain, addiction, and psychiatric disorders; (2) Assess the impacts of neurovascular coupling on PET radiotracer kinetics, with applications in neurodegenerative disorders; and (3) Develop and evaluate novel PET radiotracers for first-in-human study and clinical applications. Our research programs are highly translational spanning from animal models, first-in-human studies, to clinical applications. The appointment as a Massachusetts General Hospital, Harvard Medical School research fellow will be for 1 year with possibility for extension based on performance and the availability of funding. The positions are available immediately. The successful candidate will be a highly motivated researcher with a desire to begin an independent career related to or involving neuroimaging. The position requires a Ph.D. degree in Medical Physics, Biomedical Engineering, Computer Science, Neuroscience or a related field. However, we will consider candidates of any scientific background. This position requires experience in analysis of medical imaging data. Experience with MRI or PET is a plus. Extremely strong candidates with minimal imaging experience are still encouraged to apply. Strong written and oral English communication skills are required. [cid:clip_image001.png]Additional Skills/Abilities/Competencies The job requires a candidate who is mature, responsible and flexible with excellent organizational and people skills. S/He must be able to work with in a fast-paced environment and should be able to problem-solve/troubleshoot, juggle and prioritize multiple tasks and seek assistance when appropriate. Application Interested applicants should send a cover letter describing research interests and experience, an updated CV, and names and contact information of three references to: Hsiao-Ying (Monica) Wey, Ph.D. (E-mail: hsiaoying.wey(a)mgh.harvard.edu) Please contain “Research Fellow Application: Your Name” in the e-mail subject line. The Massachusetts General Hospital and Harvard Medical School are equal opportunity and affirmative action employers. Best, Hsiao-Ying (Monica) ------ Hsiao-Ying (Monica) Wey, Ph.D. Assistant Professor of Radiology, Harvard Medical School Director of Translational Imaging, Chemical Neuroscience Program<https://chemneuro.martinos.org/> A. A. Martinos Center for Biomedical Imaging <https://www.martinos.org/>Institute for Innovation in Imaging (i3)<https://i3.mgh.harvard.edu/> Massachusetts General Hospital 149 Thirteenth Street, Room 10.110 Charlestown, MA 02129 Phone: (617) 724-1384 Email: hsiaoying.wey(a)mgh.harvard.edu Website: weylab.martinos.org

April 15, 2021

Funding opportunities at NASA HRP solicitation Appendix E

by Reinoud Maex

From: mailman-bounces(a)neuroinformatics.be <mailman-bounces(a)neuroinformatics.be> on behalf of Zawaski, Janice A. (JSC-SD211) <janice.zawaski(a)nasa.gov> Sent: 14 April 2021 04:21 To: comp-neuro-owner(a)neuroinformatics.be Cc: Elgart, S Robin (JSC-SK4)[WYLE LABORATORIES, INC.] Subject: NASA HRP solicitation Appendix E Dear Computational Neuro Owner, My name is Janice Zawaski and I am the Space Radiation Deputy Element Scientist within the NASA Human Research Program (HRP). HRP funds research with the goal of buying down the risks associated with spaceflight such as the effects of space radiation on the CNS. Currently, the NASA Human Research Program has an active solicitation, Appendix E Topic 2, that is focused on utilizing computational brain models to characterize the effects of space radiation exposure. Due to the limited time, Step-1s (1 page LOI) due April 30th, would it be possible for an administrator to send the information below to the Computation Neuroscience Mailing list? I have also included information about our omnibus opportunity Appendix F that is released three times a year. The NASA Human Research Program has released two funding opportunities for research relevant to the Space Radiation Element. Appendix E Flagship Opportunity: https://tinyurl.com/HERO20-HHP<https://gcc02.safelinks.protection.outlook.com/?url=https%3A%2F%2Ftinyurl.c…> Space Radiation Topics: Topic 2. Computational Brain Modeling to Characterize the Effects of Space Radiation Exposure Specific Research Focus Area This topic seeks proposals that focus on identifying, based on historical data / prior research, biophysical parameters and structural features that are altered after radiation exposure and to substitute these into computational brain models in patterns reflecting radiation exposure. The model can then be used to interrogate how network activity is altered and its implications on information processing and network stability – i.e. a perturbation analysis. Network firing statistics, ability to maintain oscillations, etc. would represent some of the potential outcome measures. Due to high complexity of the research required, we encourage cross-discipline collaboration and multi-disciplinary teams, including but not limited to radiation biologists, radiation physicists, computational modelers, neuroscientists, etc. Research Platform Ground-based analogs, Computational. Proposers should discuss radiation parameters with the Space Radiation Element prior to proposal submission. Research proposing in vitro and/or in vivo irradiation experiments will be considered non-responsive. Required Deliverables Development of a computational 3D brain model of the hippocampus and/or prefrontal cortex able to characterize and quantify space radiation effects. Quantification, using the developed model, of space radiation exposure including:  Dose/Fluence Response Characterization  Effect of single ions and/or mixed fields (i.e. Proton and HZE) Desired Deliverable Identification of thresholds for failure modes. Validation of the in silico model based on the comparison to historical experimental behavioral results. Appendix F Omnibus Opportunity: https://tinyurl.com/HERO20-OMNIBUS3<https://gcc02.safelinks.protection.outlook.com/?url=https%3A%2F%2Ftinyurl.c…> Three different categories * Applied Investigations * New Investigator Opportunity (**NEW**) * Early Career Investigator Opportunity (**NEW**) The goal of the Omnibus is to expedite progress in various research areas in a short period of time, NASA is requesting proposals for short-term investigations or technology development projects that provide innovative approaches to any of the risks and associated knowledge gaps contained in the Human Research Program (HRP) Integrated Research Plan (IRP). We strongly encourage researchers from all career stages to participate as part of our ongoing efforts to broaden the expertise of our research community. Additionally, please distribute to any colleagues that might be interested in responding. Step-1 proposals are due April 30 thru the NASA NSPIRES system (NSPIRES - NASA Research Opportunities Online (nasaprs.com)<https://nspires.nasaprs.com/external/>) which requires registration. The Element is limited in the specific feedback we can provide regarding proposals but please do not hesitate to contact us with questions. Note that eligibility is limited to USA institutions. Thank you! The Space Radiation Element Team jsc-hrp-space-radiation-element(a)mail.nasa.gov Thank you, Janice Janice Zawaski, Ph.D. Deputy Element Scientist Space Radiation – Human Research Program JSC B21/2147 | Houston, TX 77058

April 15, 2021

PhD position / Bordeaux / Machine learning / Neuroscience

by Nicolas P. Rougier (inria)

Dear colleagues, Inria (https://www.inria.fr/en) and the Institute of Neurodegenerative Diseases (https://www.imn-bordeaux.org/en/) is opening a PhD position in machine learning and neuroscience. Title: Bags O' Neurons Who: Nicolas P. Rougier (Inria) & Thomas Boraud (CNRS) When: 09/2021 to 09/2024 Where: Institute of Neurodegenerative Diseases, Bordeaux, France What: The objective of this PhD is to define the original blueprint of the decision-making network in vertebrate using the newt as a model. More information and application at: https://aap.u-bordeaux.fr/siaap/pub/appel/view/166 Nicolas Rougier https://github.com/rougier https://www.labri.fr/perso/nrougier

April 15, 2021

Open position in Juelich, Germany: Data Steward Neuroscience - Helmholtz Metadata Collaboration in the Hub Information

by Martina Reske

Research data are the foundation of scientific discovery. Establishing the provenance of data, enabling its reusability and ensuring long-term availability increases the value, transparency and visibility of research, and opens possibilities for interdisciplinary research, e.g., through approaches from artificial intelligence. The Helmholtz Metadata Collaboration is an association-wide platform that develops and establishes novel concepts, services and workflows to annotate complex and heterogeneous research data with metadata throughout the various phases of acquisition and processing in support of the FAIR principles HMC will be anchored as a “Metadata Hub” within the Helmholtz research domain Information in order to engage and actively involve the scientific community. The Hub is coordinated by the Institute for Advanced Simulation - Materials Data Science and Informatics (IAS-9) at Forschungszentrum Jülich. Within the Hub Information, the team for Data Science in Electro- and Optophysiology at the Institute of Neuroscience and Medicine (INM-10) headed by Dr. Michael Denker as part of the Statistical Neuroscience group of Prof. Sonja Grün (INM-6) will address the needs from the perspective of the neuroscience community in close coordination with its embedding in international initiatives (e.g., the “Human Brain Project”). The advertised position will link the activities of the INM-6 to the “Metadata Hub Information” when creating tools, establishing use cases, and working on standards for metadata and ontologies. We are looking to recruit a Data Steward Neuroscience - Helmholtz Metadata Collaboration in the Hub Information Your Job: * Support of the Helmholtz-wide establishment of the HMC Hub Information at Forschungszentrum Jülich and in the domain of neuroscience * Organization, integration and utilization of metadata schemas within the neuroscience domain and metadata expert communities within the HMC and the Hub Information * (Co-)Development of domain-specific vocabularies, ontologies and metadata schemas in collaboration with colleagues in the Hub Information and across the HMC, as well as with international neuroscience initiatives (e.g., EBRAINS) * Design and development of conceptual solutions and software to facilitate metadata creation workflows and stimulate metadata recording in neuroscience laboratories * Execution of collaborative projects for implementations in the context of FAIR data principles, supported by further HMC computer scientists * Co-development and operation of a domain-specific consulting format for anchoring metadata management in the research centers and dissemination of HMC developed tools * Representing the HMC and its technologies at scientific seminars, conferences, during educational courses, and to the public * Close cooperation with scientists from neuroscience (e.g., in the context of the Bernstein Network) and building interactions to scientific and engineering disciplines, especially in questions of metadata and in the design of projects supported by HMC * Building competence networks with other data stewards and supporting computer scientists * Preparation of position papers, best practices and publications Your Profile: * Completed study (Master, Diploma) in natural sciences or engineering * PhD degree and neuroscience background is beneficial * Proven knowledge and programming experience in at least one high-level language as well as knowledge in script languages (preferably Python), experience in web-based services for managing software (version control, issue tracking, CI,…) * Practical experience with data / research data management and data analysis in neuroscience * Experience in applying and designing metadata standards is an advantage * High ability to work with an interdisciplinary, international team * Communication and teamwork skills as well as the ability to cooperate * Fluent in English, spoken and written * Ability to work independently, systematically and on one’s own responsibility * Good communication skills with developers and scientists * Enthusiasm for a highly topical subject with great scientific and social relevance * Willingness to travel Our Offer: We work on the very latest issues that impact our society and are offering you the chance to actively help in shaping the change! We support you in your work with: * A position in a creative, dynamic and international team that conducts research at the frontiers of science, where your work will have noticeable impact on shaping the digitization of science * World class science environment at the interface between neuroscience and digital technologies, enabling scientific progress on the most complex known systems * A large research campus in Jülich with green spaces, offering the best possible means for networking with colleagues and pursuing sports alongside work * An attractive workspace at the "Technologiezentrum Aachen" (TZA) close to Aachen downtown, for the cooperation with the HMC team there * Secure employment in a dynamic, international and interdisciplinary context * Comprehensive training courses and individual opportunities for personal and professional further development * Full-time position with the option of slightly reduced<https://www.hrecruiting.de/data/t5ChjatkIfdwmACO/Info_Vollzeitnah_en.pdf> working hours and 30 days of annual leave * Targeted services for international employees, e.g. through our International Advisory Service We offer you an exciting and varied role in an international and interdisciplinary working environment. The position is initially for a fixed term of 1 years, with possible long-term prospects. Salary and social benefits in conformity with the provisions of the Collective Agreement for the Civil Service (TVöD). Depending on the applicant`s qualifications and the precise nature of the tasks, salary grade EG 13 TVöD-Bund. Forschungszentrum Jülich promotes equal opportunities and diversity in its employment relations. We also welcome applications from disabled persons. We look forward to receiving your application until 02.05.2021 via our online recruiting system<https://www.hrecruiting.de/obf2/bewerbermanagement.php?kunden_nr=t5ChjatkIf…>. Reference number: 2021-136 -- Dr. Martina Reske Scientific Coordinator Institute of Neuroscience and Medicine (INM-6) Computational and Systems Neuroscience & Institute for Advanced Simulation (IAS-6) Theoretical Neuroscience Jülich Research Centre and JARA Jülich, Germany Work +49.2461.611916 Work Cell +49.151.26156918 Fax +49.2461.619460 www.csn.fz-juelich.de<http://www.csn.fz-juelich.de> ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Juelich GmbH 52425 Juelich Sitz der Gesellschaft: Juelich Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Volker Rieke Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender), Karsten Beneke (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt, Prof. Dr. Frauke Melchior ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------

April 14, 2021

EBRAINS Scientific Liaison Officer position at Jülich Supercomputing Centre, Germany

by Abigail Morrison

Dear Colleagues, We have a position open for a Scientific Liaison Officer for EBRAINS at the Jülich Supercomputing Centre, Jülich Research Centre, Germany. We are looking for candidates with excellent communication skills, a strong scientific background and computing skills to both promote EBRAINS in the neuroscience community, and drive development activities within the Human Brain Project to ensure the requirements of the community are being met. For a full description and details of how to apply, please see the announcement on our website: https://www.fz-juelich.de/SharedDocs/Stellenangebote/_common/dna/2021-103-E… Closing date: 2 May 2021 All the best, Abigail Morrison -- Prof. Dr. Abigail Morrison IAS-6 / INM-6 / SimLab Neuroscience Jülich Research Center & Computer Science 3 - Software Engineering RWTH Aachen http://www.fz-juelich.de/inm/inm-6 http://www.fz-juelich.de/ias/jsc/slns http://www.se-rwth.de Office: +49 2461 61-9805 Fax # : +49 2461 61-9460 Pronouns: she/her ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Juelich GmbH 52425 Juelich Sitz der Gesellschaft: Juelich Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Volker Rieke Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender), Karsten Beneke (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt, Prof. Dr. Frauke Melchior ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------

April 14, 2021

30th Annual Computational Neuroscience Meeting (CNS*2021) - CALL FOR ABSTRACTS

by Martin Zapotocky

**Organization for Computational Neurosciences 2885 Sanford Ave SW #15359 Grandville, MI 49418 USA** ** *Call for Abstracts* *30th Annual Computational Neuroscience Meeting (CNS*2021) - ONLINE** **July 3-7, 2021 *The main meeting begins the evening of Saturday July 3rd and runs through Tuesday July 7. It will be preceded by a day of tutorials (Saturday July 3rd) and followed by workshops (Tuesday July 7 mixed with the main meeting and Wednesday July 8 workshops only). *Keynote Speakers:* *Wolf Singer - **Max Plank Institute for Brain Research **Danielle Bassett - **Dept. of Bioengineering, University of Pennsylvania **Sonia Gruen - **Statistical Neuroscience, Forschungszentrum Juelich **Bill Bialek - **Dept. of Physics, Princeton University* Registration and abstract submission are open. *Abstract submission deadline: May 15th, 2021.* *Accept/reject **notification by June 1**^st ** **Talk/Poster **notification by June 15**^th * Note that one of the authors must register as sponsoring author for the main meeting *before abstract submission*. In case the abstract is not accepted for presentation, the registration fee will be refunded. Submitted abstracts are used for creating the program and for publication. Please follow the formatting guidelines on the submission site. Registration: https://ocns.memberclicks.net/cns-2021-online-registration <https://ocns.memberclicks.net/cns-2021-online-registration>Registration fees: https://ocns.memberclicks.net/cns-2021-registration-fees <https://ocns.memberclicks.net/cns-2021-registration-fees> Abstract Submission for Main Meeting: https://cns.confmaster.net/ <https://cns.confmaster.net/> For up-to-date conference information, please visit: https://www.cnsorg.org/cns-2021-online <https://www.cnsorg.org/cns-2021-online> -------------------------------------------------------------------------------------------- OCNS is the international member-based society for computational neuroscientists. Become a member to be eligible for awards and other benefits. Visit our website for more information: https://www.cnsorg.org <https://www.cnsorg.org> -------------------------------------------------------------------------------------------- ------------------------------------------------------------------------ Upozorneni: Neni-li v teto zprave vyslovne uvedeno jinak, ma tato E-mailova zprava nebo jeji prilohy pouze informativni charakter. Tato zprava ani jeji prilohy v zadnem ohledu ustavy AV CR, v.v.i. k nicemu nezavazuji. Text teto zpravy nebo jejich priloh neni navrhem na uzavreni smlouvy, ani prijetim pripadneho navrhu na uzavreni smlouvy, ani jinym pravnim jednanim smerujicim k uzavreni jakekoliv smlouvy a nezaklada predsmluvni odpovednost ustavu AV CR, v.v.i. Disclaimer: If not expressly stated otherwise, this e-mail message (including any attached files) is intended purely for informational purposes and does not represent a binding agreement on the part of Institutes of the Czech Academy of Sciences. The text of this message and its attachments cannot be considered as a proposal to conclude a contract, neither the acceptance of a proposal to conclude a contract, nor any other legal act leading to concluding any contract; nor does it create any pre-contractual liability on the part of Institutes of the Czech Academy of Sciences.

April 13, 2021

Call for participation in the Frontiers topic "Advances in brain functional and structural networks modeling via graph theory"

by farras abdelnour

We would like to announce a special issue of Frontiers in Neuroscience titled “Advances in brain func/onal and structural networks modeling via graph theory,” https://www.frontiersin.org/research-topics/20135/advances-in-brain-functio… The aims of this Research Topic are to advance the current understanding of the brain modeled as a mathematical network, develop new and advanced methods capturing the graph relationship between function and structure, propose new analysis methods of brain time series explicitly grounded on underlying structural network, and ultimately apply the resulting knowledge to brain disease and further foster the understanding of the brain’s underlying configuration and dynamics. We welcome submissions focusing on but not limited to the following topics: - Application of tools such as machine learning, deep learning and convolutional neural network to functional imaging data from fMRI to EEG to predict function from structure. - Study of graph properties of structural or functional networks in healthy and non-healthy brains. - Graph signal processing and harmonic analysis applied to brain networks. - Novel methods and modalities for constructing functional and structural networks. Farras Abdelnour Amy Kuceyeski Ashish Raj Yasser Iturria Medina Samuel Deslauriers-Gauthier -- Farras Abdelnour *Guest Associate Editor of the Frontiers Research Topic **"**Advances in brain functional and structural networks modeling via graph theory <https://www.frontiersin.org/research-topics/20135/advances-in-brain-functio…>* *”* farras.abdelnour(a)gmail.com http://sacklerinstitute.academia.edu/FarrasAbdelnour http://www.abdelnour.photos

April 13, 2021

Postdoc position in Litwin-Kumar group at Center for Theoretical Neuroscience, Columbia U.

by ashok litwin-kumar

A Postdoctoral Research Scientist position is available in the group of Dr. Ashok Litwin-Kumar at Columbia’s Center for Theoretical Neuroscience. The postdoc will develop tools for the analysis of synapse-level wiring diagrams (“connectomes”) and theoretical methods for understanding how network structure identified by such datasets constrains the dynamics of task-optimized neural networks. The development of such methods is important and timely given the increasing availability and scale of connectomic data. The postdoc will be integrated into the large, vibrant neuroscience community at Columbia University of which the Center for Theoretical Neuroscience forms a key component. They will also have the opportunity to participate in strong existing collaborations with groups at Columbia, Janelia, Cambridge, and elsewhere focused on the generation and analysis of connectome data. Applicants are expected to have a PhD in Physics, Mathematics, Computer Science, Statistics, Neuroscience, Biology, or a related discipline and, preferably, experience in theoretical neuroscience or the statistical analysis of neuroscience data. The Mortimer B. Zuckerman Mind Brain Behavior Institute at Columbia University brings together researchers from different scientific disciplines to transform our understanding of the mind and brain. In this highly interactive research environment, laboratories work together to gain critical insights into human health by exploring how the brain develops, performs, endures and recovers. The Zuckerman Institute is housed in the Jerome L. Greene Science Center, an architectural masterpiece on Columbia University’s Manhattanville campus. All appointments are initially for one year and are renewable for at least three years given satisfactory performance. The salary is competitive. Applicants should apply through Columbia’s job portal: https://pa334.peopleadmin.com/postings/7453 Applications should include the following: 1. CV, including a list of publications 2. Statement of research interests 3. Three letters of reference (reference writers should send their letters directly to yao2107(a)columbia.edu) Columbia University is an Affirmative Action/Equal Opportunity employer. Columbia values diversity among its students, staff, and faculty and strongly welcomes applications from women, persons with disabilities, protected veterans, and underrepresented minorities.

April 13, 2021