- Comp-neuro - lists.cnsorg.org

computational neuroscience postdoc position

by Neymotin, Samuel (NKI)

A postdoctoral scientist position is available at the Nathan Kline Institute (NKI) for Psychiatric Research (https://www.nki.rfmh.org<https://www.nki.rfmh.org/>) to work on computational neuroscience research funded by recently awarded grants. Our NIH-funded project investigates the brain's dynamic circuit motifs underlying internal vs. external-oriented processes in the auditory and interconnected areas, using circuit modeling of the thalamocortical system. In this project, the postdoc will build data-driven biophysical models constrained by data collected from electrophysiology labs at NKI (Noelle O’Connell, Charlie Schroeder) & The Feinstein Institutes for Medical Research (Stephan Bickel), and then use the models to predict optimal neuromodulation strategies testable in vivo. Applicants should have a strong background in: multiscale modeling using NEURON/NetPyNE, Python software development, neural/electrophysiology data analysis, machine learning, and writing/presenting research. To apply, email a CV and cover letter to Sam Neymotin (samuel.neymotin(a)nki.rfmh.org) NKI is an equal opportunity employer. The position requires presence at NKI(Orangeburg, New York), with part-time telecommuting possible. ________________________________ IMPORTANT NOTICE: This e-mail is meant only for the use of the intended recipient. It may contain confidential information which is legally privileged or otherwise protected by law. If you received this e-mail in error or from someone who was not authorized to send it to you, you are strictly prohibited from reviewing, using, disseminating, distributing or copying the e-mail. PLEASE NOTIFY US IMMEDIATELY OF THE ERROR BY RETURN E-MAIL AND DELETE THIS MESSAGE FROM YOUR SYSTEM. Thank you for your cooperation.

June 12, 2023

Computational neuroscience, AI and SI: deadlines June 26 and July 26 - National PhD in AI

by Matteo Ferrante

*Call:* Are you fascinated by the intriguing intersection of Computational Neuroscience and Artificial Intelligence? Do you find yourself captivated by groundbreaking concepts such as neurotech, neuromorphic computing, and many-person neuroscience, among others? Are you intrigued by the vast potential of artificial intelligence in the realm of biomedical data modeling? If yes, we invite you to consider applying for one of the three exciting PhD positions available at the University of Rome Tor Vergata. In our enriching research and training program, you can delve into a wide spectrum of innovative domains ranging from Neurotech to Biomedical imaging and simulation, novel drug delivery systems and neuromodulation technology, physiological systems modeling, the future of AI-based radiation oncology planning, and HCP, among others. The possibilities for exploration, growth, and discovery are limitless, with opportunities to engage in both computational and experimental work tailored to align with your unique profile and interests. *Activities:* We are looking for enthusiastic, result-oriented graduates or postgraduates who are eager to immerse themselves in these pioneering research fields. Join our interdisciplinary team (https://fismed.uniroma2.it/) to contribute to a dynamic environment that thrives on collaboration, teamwork, and intellectual curiosity. As part of our team, you will engage in a range of activities from grant-writing and drafting of scientific publications to occasionally teaching at the university level. Moreover, you'll get the opportunity to collaborate at national and international levels and tackle challenging research problems that span across the physical, mathematical, computational, basic and clinical sciences. We are proud recipients of funding from renowned organizations such as the European Commission (Horizon 2020 and Horizon Europe, EIC), the Italian National Ministry of Health, The Italian Association for Cancer research (AIRC), the US Department of Defense (DOD), and the National Institutes of Health (NIH), as well as private institutions and foundations. *Profile:* You hold a Master's degree in Computational Neuroscience, Artificial Intelligence, Applied Physics, Computer Science, Computer/Electrical Engineering, or a related discipline. You have a robust understanding of dynamical systems theory, computational neuroscience and/or AI. Desirable but not necessary: experience with neuroscience data, control systems, neural differential equations, and other related fields. You have a strong background in mathematics and Python programming skills, and are familiar with advanced machine learning libraries. You are passionate about research and exploration in the field. *Application:* To apply, send a brief motivation letter and a Curriculum Vitae to Prof. Nicola Toschi (toschi(a)med.uniroma2.it) and cc Dr. Andrea Duggento (andrea.duggento(a)uniroma2.eu) More information about our PhD programme at: https://www.phd-ai.it/en/359-2/ We look forward to your expression of interest and potential contribution to the exciting world of Computational Neuroscience and AI! -- Prof. Nicola Toschi https://scholar.google.com/citations?hl=en&user=kyI6AJ8AAAAJ&view_op=list_w… Professor of Medical Physics Medical Physics Section - Department of Biomedicine and Prevention University of Rome "Tor Vergata" Via Montpellier 1 - 00133 Rome (IT) toschi(a)med.uniroma2.it Research Staff, Associate Investigator A.A. Martinos Center for Biomedical Imaging - Harvard Medical School/MGH 149 13th street, 02129 Boston (MA), USA nicola(a)nmr.mgh.harvard.edu

June 12, 2023

International SiNAPSA Neuroscience Conference (SNC'23) - September 28th to 30th 2023

by Nina Omejc

** *Dear colleagues,* * We kindly invite you to participate at the 10th biennial international SiNAPSA Neuroscience Conference (SNC'23), which will take place from September 28th to 30thin the heart of Ljubljana, Slovenia. The conference will cover a wide range of topics in the field of neuroscience, medicine, psychology, and related disciplines. It will feature the latest research contributions that enhance our understanding of brain function and the treatment of neurological disorders. Do not miss the opportunity to engage in knowledge exchange, gain novel insights, and establish connections with esteemed colleagues and leading experts. SNC'23 is supported by the International Brain Research Organization (IBRO), the International Centre for Genetic Engineering and Biotechnology (ICGEB), and the neuroscience societies of neighbouring countries. Distinguished plenary speakers such as Prof. Martin Turner, Prof. Apkar Vania Apkarian, Prof. Jasna Križ, Prof. Daniele Perani and Prof. Aleksej Verkhratsky will enrich the conference program. Furthermore, several events, including the Ljubljana Clinical Neurophysiology Symposium 2023 and the Educational Workshop on Pain <http://www.sinapsa.org/SNC23/workshop/programme>will accompany the main programme <https://www.sinapsa.org/snc23/media/schedule/Schedule-SNC23.pdf>. Junior scientists also have the opportunity to apply for a travel grant <http://www.sinapsa.org/SNC23/call-for-travel-grants>. For further information regarding submissions of poster presentation abstracts, registration, and the programme, please visit our website at https://www.sinapsa.org/SNC23 <https://www.sinapsa.org/SNC23>or contact us at snc23(a)sinapsa.org <mailto:snc23@sinapsa.org>. Important dates: * Abstract submission deadline - June 17th * Deadline for travel grant application - June 17th * Early registration deadline - August 24th Kind regards, Nina Omejc, on behalf of the SNC’23 Programme and Organising Committees *

June 9, 2023

[Meetings] Live Demo at IEEE Sensors 2023 conference

by Calogero Maria Oddo

Dear Colleagues, hereafter, please find a reminder about the possibility to submit Live Demo proposals at the IEEE Sensors 2023 conference. This is an opportunity to demonstrate novel sensing technologies resulting, as an example, from research projects. The IEEE Sensors 2023 conference will be held in Vienna from October 29 to November 1, 2023: https://2023.ieee-sensorsconference.org/ As always, it will be a major discussion forum for new ideas, technologies and applications concerning the topic of sensors. In addition to the presentation of oral and poster papers, an interactive session is available to present prototypes and demonstrators of new ideas: https://2023.ieee-sensorsconference.org/live-demos The operational deadlines are as follows: Paper/Demo proposal: June 18, 2023 Notification of acceptance: August 9, 2023 Final submission: August 30, 2023 Best regards, Calogero Oddo -- Calogero M. Oddo, PhD Associate Professor of Bioengineering https://www.santannapisa.it/en/calogero-maria-oddo https://scholar.google.com/citations?user=y1rffgkAAAAJ&hl=en Head of the Neuro-Robotic Touch Laboratory The BioRobotics Institute and Department of Excellence in Robotics & AI Interdisciplinary Research Center Health Science Sant'Anna School of Advanced Studies, Pisa, Italy https://www.santannapisa.it/en/education/phd-biorobotics http://www.santannapisa.it/en/neuro-robotic-touch-laboratory email: calogero.oddo(a)santannapisa.it<mailto:calogero.oddo@santannapisa.it> While it suits me to email now, I do not expect a reply outside of your own working hours.

June 9, 2023

PhD position (deadline June 19th): Learning and Control with Spiking Neural Networks at the Donders Centre for Cognition

by Keemink, S.W. (Sander)

Are you interested in how our brain is able to so precisely control the body, and adapt to new situations? Would you like to dive deep into current theories for how this works, and develop new ones? Are you either highly interested in modelling the brain, and/or in applying the resulting theories to practical problems? Then this is a PhD position you should apply for. To successfully control the body our brain needs to generate stable states (i.e. keep a hand somewhere), but also full dynamic behaviours (i.e. a full arm swing). The brain does this highly efficiently through networks of spiking neurons - the efficiency and success of which is yet to be reproduced in AI. Crucially, neural activity during dynamic tasks is often observed to lie on lower-dimensional manifolds. Why this is useful, and how networks generate and adapt such activity manifolds, is the subject of many theoretical models but still very much an open question. In this NWO-funded 4-year PhD project, using tools from both AI and neuroscience, you will develop neural networks which produce such low-dimensional manifolds and then use these to learn efficient and effective control. This project is expected to yield more capable AI systems and further our understanding of brain computations. Dependent on your background and interests, the project can either go deep into applying the resulting models to AI control problems, or reproduce and predict neuroscience experiments. You will be supervised by Dr. Sander Keemink and Prof. Marcel van Gerven, and advised by Dr. Nasir Ahmad. The project is hosted at the AI department of the Donders institute, where there are additional opportunities to collaborate with experts in neuroscience, robotics, AI, and other related disciplines. Profile: * You have obtained a Master's degree in Computational Neuroscience, Artificial Intelligence, Applied Physics, Computer Science, Computer/Electrical Engineering, or a related discipline. * You have a strong understanding of dynamical systems theory, and computational neuroscience and/or AI (knowledge of spiking neural networks is a big plus). * Desirable but not essential: experience with neuroscience data, control systems, and/or neural differential equations. * You have an excellent background in mathematics and Python programming skills, and you are familiar with advanced machine learning libraries. * You have a passion for research. Application: For more details, and application form, see here: https://www.ru.nl/en/working-at/job-opportunities/phd-candidate-learning-an… -- Sander Keemink Assistant professor (https://www.ru.nl/en/people/keemink-s) Department of Artificial Intelligence Donders Institute for Brain, Cognition and Behaviour Radboud University, Nijmegen, The Netherlands

June 9, 2023

CFP COMPLEX NETWORKS 2023 Menton Riviera France November 28 - 30, 2023

by Hocine Cherifi

*12* *th **International Conference on Complex Networks & Their Applications* Menton Riviera <https://www.menton-riviera-merveilles.co.uk/>, France November 28 - 30, 2023 COMPLEX NETWORKS 2023 <https://complexnetworks.org/> Please submit your contribution until *September 02, 2023*. *SPEAKERS* · Michael Bronstein <https://www.cs.ox.ac.uk/people/michael.bronstein/> University of Oxford UK · Kathleen Carley <https://www.cylab.cmu.edu/directory/bios/carley-kathleen.html> Carnegie Mellon University USA · Manlio De Domenico <https://manliodedomenico.com/> University of Padua Italy · Danai Koutra <http://web.eecs.umich.edu/~dkoutra/> University of Michigan USA · Romualdo Pastor-Satorras <http://www.fen.upc.edu/~romu/> Univ. Politècnica de Catalunya Spain · Tao Zhou <https://scholar.google.com/citations?user=MXgWgmEAAAAJ&hl=en> USTC China *TUTORIALS* · Tiago de Paula Peixoto <https://skewed.de/tiago> CEU Vienna Austria · Maria Liakata <https://www.turing.ac.uk/people/researchers/maria-liakata> Queen Mary University of London UK *PUBLICATION* Full papers (not previously published up to 12 pages) and Extended Abstracts (about published or unpublished research up to 4 pages) are welcome. · *Papers *will be included in the conference *proceedings edited by Springer* · *Extended abstracts* will be published in the *Book of Abstracts (with ISBN)* Extended versions will be invited for publication in *special issues of international journals:* o Applied Network Science <https://appliednetsci.springeropen.com/> edited by Springer o Advances in Complex Systems <https://www.worldscientific.com/toc/acs/24/02> edited by World Scientific o Complex Systems <https://www.complex-systems.com/about/> o Entropy <https://www.mdpi.com/journal/entropy> edited by MDPI o PLOS <https://journals.plos.org/plosone/> one <https://journals.plos.org/plosone/> o Social Network Analysis and Mining <https://link.springer.com/journal/13278> edited by Springer *SUBMISSION* https://complexnetworks.org/submission/ *TOPICS* *Topics include, but are not limited to: * o Models of Complex Networks o Structural Network Properties and Analysis o Epidemics o Community Structure o Motifs o Network Mining o Network embedding o Machine learning with graphs o Dynamics and Evolution Patterns of Complex Networks o Link Prediction o Multilayer Networks o Controllability o Synchronization o Visual Representation o Large-scale Graph Analytics o Social Reputation, Influence, and Trust o Information Spreading in Social Media o Rumour and Viral Marketing in Social Networks o Recommendation Systems o Financial and Economic Networks o Mobility o Biological and Technological Networks o Mobile call Networks o Bioinformatics o Earth Sciences Applications o Resilience and Robustness of Complex Networks o Networks for Physical Infrastructures o Networks, Smart Cities and Smart Grids o Political networks o Supply chain networks o Complex networks and information systems o Complex networks and CPS/IoT o Graph signal processing o Cognitive Network Science o Network Medicine o Network Neuroscience o Quantifying success through network analysis o Temporal and spatial networks o Historical Networks o Graph-Based Natural Language Processing *GENERAL CHAIRS* Hocine Cherifi (University of Burgundy, France) Luis M. Rocha (Binghamton University, USA) Join us at COMPLEX NETWORKS 2023 <https://www.complexnetworks.org/> *-------------------------* Hocine CHERIFI University of Burgundy Franche-Comté Laboratoire* I*nterdisciplinaire *C*arnot de *B*ourgogne - ICB UMR 6303 CNRS Editor in Chief Applied Network Science <https://appliednetsci.springeropen.com/> Editorial Board member PLOS One <https://journals.plos.org/plosone/>, IEEE ACCESS <https://ieeeaccess.ieee.org/?http%3A%2F%2Fieeeaccess_ieee_org%2F>, Scientific Reports <https://www.nature.com/srep/>, Journal of Imaging <https://www.mdpi.com/journal/jimaging>, Quality and Quantity <https://www.springer.com/journal/11135/>, Computational Social Networks <https://computationalsocialnetworks.springeropen.com/>, Complex Systems <https://www.complex-systems.com/>

June 9, 2023

Open call for postdoctoral applications in areas of Artificial Intelligence, Machine Learning and Cognitive Robotics

by Ajaz Bhat

Apologies for any cross-posting! Dear all We at the Universiti Brunei Darussalam (UBD) are inviting open applications for postdoctoral positions in various areas including Artificial Intelligence, Machine Learning, Cognition and Cognitive Robotics. As a postdoctoral fellow, you may work on a research theme of your own or join one of my existing research projects. You will also be able to apply for joint grant proposals within UBD. If you are interested in areas of Artificial Intelligence, Machine Learning, Cognition and Cognitive Robotics, please email me your interests and CV at ajaz.bhat [AT] ubd.edu.bn. For more details on the postdoctoral scheme and benefits, please visit https://research.ubd.edu.bn/?page_id=3797 Ajaz A. Bhat, PhD Programme Leader for AI and Robotics, Applied AI and Data Science School of Digital Science (SDS), Universiti Brunei Darussalam (UBD) Web: https://expert.ubd.edu.bn/ajaz.bhat

June 9, 2023

Three studentships in biomimetic embodied AI

by Thomas Nowotny

Dear Comp-Neuro community, We are offering 3 PhD studentships in our unique be.AI doctoral training centre in biomimetic embodied AI (http://www.sussex.ac.uk/ccnr/be_ai) at the University of Sussex in Brighton. Apply online: https://www.sussex.ac.uk/study/phd/apply Full details at https://www.sussex.ac.uk/study/fees-funding/phd-funding/view/1403-Leverhulm…. Kind regards, Thomas -- Prof. Thomas Nowotny Head of AI Research Group CCNR, Sussex Neuroscience Phone: +44-1273-678593 Engineering and Informatics, Fax: +44-1273-877873 University of Sussex, Falmer, Brighton BN1 9QJ sussex.ac.uk/informatics/tnowotny<http://sussex.ac.uk/informatics/tnowotny> <../../owa/redir.aspx?C=9e11bb0e527242938402b42d9b5498ea&URL=http%3a%2f%2fsussex.ac.uk%2finformatics%2ftnowotny> I support the University of Sussex Community Pledge, as I continue to help those around me during the pandemic. Small acts of collaboration, kindness and integrity can make a big difference. www.sussex.ac.uk/community-pledge<http://www.sussex.ac.uk/community-pledge>

June 8, 2023

Late-breaking poster abstract submission for the 32nd Annual Computational Neuroscience Meeting ends on June 15

by Rubchinsky, Leonid L

Dear Colleagues, We would like to remind that the late-breaking poster abstracts submission at CNS*2023 ends on June 15. CNS*2023, 32nd Annual Computational Neuroscience Meeting, will be in Leipzig, Germany, on July 15-19, 2023. The information about the meeting and abstract submission can be found here: Registration: https://ocns.memberclicks.net/cns-2023-registration Abstract submission: https://www.cnsorg.org/cns-2023-abstract-submission CNS*2023 information: https://www.cnsorg.org/cns-2023 With kind regards, Leonid Rubchinsky OCNS Vice President *********************** Leonid Rubchinsky, PhD Professor Department of Mathematical Sciences, Indiana University Purdue University Indianapolis Stark Neurosciences Research Institute, Indiana University School of Medicine 402 N. Blackford St Indianapolis, IN 46202-3216 lrubchin(a)iupui.edu http://www.math.iupui.edu/~lrubchin ***********************

June 8, 2023

Modellers Workshop for the Brain Dynamics Toolbox (Final Call)

by Stewart Heitmann

Final call for the Modeller’s Workshop for the Brain Dynamics Toolbox. This is an online course for researchers, students and instructors who wish to build custom dynamical models using the Brain Dynamics Toolbox. The course has a practical focus on programming bespoke models and visualising the dynamics. Topics include Ordinary Differential Equations, Partial Differential Equations, Delay Differential Equations, Stochastic Differential Equations, Auxiliary Plot Functions and command-line tools. Example code is provided in all cases. Study time is 8 hours. Course Website https://bdtoolbox.teachable.com/p/modellers-workshop Toolbox Website https://bdtoolbox.org Important Information The course is limited to 25 students. Enrolments close Sun 11th Jun 2023.

June 8, 2023

Professorship in AI at Bristol University

by Conor Houghton

The Faculty of Engineering in Bristol University is looking to appoint a professor in AI; this opening isn't specific to computational neuroscience but candidates from the AI / ML part of computational neuroscience or cognitive science would certainly be considered, the Neural Computation group in Bristol are involved in the search and will be part of any discussion about who to appoint. Neural Computation is an important part of the machine learning community in Bristol, we are involve in teaching AI and are recognized as contributing a lot to the research profile of the university in this area. We are very keen that strong candidates for our community consider applying! https://www.bristol.ac.uk/jobs/find/details/?jobId=313360&jobTitle=Professo… The deadline is 25 June. All the best Con ______________________________ Conor Houghton Computer Science, Bristol University. Merchant Vulturers Building, Woodland Road BS8 1UB, Bristol conorhoughton.github.io pronouns: he / him [cid:a899a289-67ea-4622-b7b1-ad158d51af85]

June 7, 2023

CFP COMPLEX NETWORKS 2023 Menton Riviera France November 28 - 30, 2023

by Hocine Cherifi

*12* *th **International Conference on Complex Networks & Their Applications* Menton Riviera <https://www.menton-riviera-merveilles.co.uk/>, France November 28 - 30, 2023 COMPLEX NETWORKS 2023 <https://complexnetworks.org/> You are cordially invited to submit your contribution until *September 02, 2023*. *SPEAKERS* · Michael Bronstein <https://www.cs.ox.ac.uk/people/michael.bronstein/> University of Oxford UK · Kathleen Carley <https://www.cylab.cmu.edu/directory/bios/carley-kathleen.html> Carnegie Mellon University USA · Manlio De Domenico <https://manliodedomenico.com/> University of Padua Italy · Danai Koutra <http://web.eecs.umich.edu/~dkoutra/> University of Michigan USA · Romualdo Pastor-Satorras <http://www.fen.upc.edu/~romu/> Univ. Politècnica de Catalunya Spain · Tao Zhou <https://scholar.google.com/citations?user=MXgWgmEAAAAJ&hl=en> USTC China *TUTORIALS* · Tiago de Paula Peixoto <https://skewed.de/tiago> CEU Vienna Austria · Maria Liakata <https://www.turing.ac.uk/people/researchers/maria-liakata> Queen Mary University of London UK *PUBLICATION* Full papers (not previously published up to 12 pages) and Extended Abstracts (about published or unpublished research up to 4 pages) are welcome. · *Papers *will be included in the conference *proceedings edited by Springer* · *Extended abstracts* will be published in the *Book of Abstracts (with ISBN)* Extended versions will be invited for publication in *special issues of international journals:* o Applied Network Science <https://appliednetsci.springeropen.com/> edited by Springer o Advances in Complex Systems <https://www.worldscientific.com/toc/acs/24/02> edited by World Scientific o Complex Systems <https://www.complex-systems.com/about/> o Entropy <https://www.mdpi.com/journal/entropy> edited by MDPI o PLOS <https://journals.plos.org/plosone/> one <https://journals.plos.org/plosone/> o Social Network Analysis and Mining <https://link.springer.com/journal/13278> edited by Springer *SUBMISSION* https://complexnetworks.org/submission/ *TOPICS* *Topics include, but are not limited to: * o Models of Complex Networks o Structural Network Properties and Analysis o Epidemics o Community Structure o Motifs o Network Mining o Network embedding o Machine learning with graphs o Dynamics and Evolution Patterns of Complex Networks o Link Prediction o Multilayer Networks o Controllability o Synchronization o Visual Representation o Large-scale Graph Analytics o Social Reputation, Influence, and Trust o Information Spreading in Social Media o Rumour and Viral Marketing in Social Networks o Recommendation Systems o Financial and Economic Networks o Mobility o Biological and Technological Networks o Mobile call Networks o Bioinformatics o Earth Sciences Applications o Resilience and Robustness of Complex Networks o Networks for Physical Infrastructures o Networks, Smart Cities and Smart Grids o Political networks o Supply chain networks o Complex networks and information systems o Complex networks and CPS/IoT o Graph signal processing o Cognitive Network Science o Network Medicine o Network Neuroscience o Quantifying success through network analysis o Temporal and spatial networks o Historical Networks o Graph-Based Natural Language Processing *GENERAL CHAIRS* Hocine Cherifi (University of Burgundy, France) Luis M. Rocha (Binghamton University, USA)

June 7, 2023

Autumn School at Ulster University

by O'Donnell, Cian

The Intelligent Systems Research Centre (ISRC) from Ulster University, Derry~Londonderry campus is delighted to announce that the international Computational Neuroscience, Neurotechnology and Neuro-inspired AI (ISRC-CN3) Autumn School will be held again for the third time this year. The school will be organised in a hybrid mode, providing facilities for both in-person and online attendees. Supported by the IEEE Computational Intelligence Society, IEEE Brain and other sponsors, this year's Autumn School will run from the 25th October to 31st October, inclusively. The topics covered in the seven-day ISRC-CN3 Autumn School include: * mathematical foundations in neuroscience * computational modelling of neural-glial systems, neuromodulators and cognition * neural data science * neurotechnology * neuromorphic computing and self-repaired intelligent machines * spiking neural networks and applications * cognitive robotics * ethics in neurotechnology and AI * entrepreneurship in neurotechnology and AI This ISRC-CN3 Autumn School is unique not only in the range and types of topics covered but it will also be delivered in an integrated way, from pedagogical to advanced levels. The school is primarily targeted at PhD student level but we also welcome applications from MSc students, postdoctoral researchers, academic faculty, and industrial researchers. Registration is made highly affordable, and bursaries may be available. Academic researchers at the ISRC and invited external speakers will contribute to the delivery of this seven-day School, which will consist of lectures, labs and group projects. Attendees will have the opportunity to present their group work on the final day, and awards will be given to the top presenters. Partial travel bursary will be provided to selected attendees. For more information and application, please visit the website at: https://www.ulster.ac.uk/faculties/computing-engineering-and-the-built-envi… Application for the Autumn School is now opened for both in-person and online attendees. The deadline for in-person application is 20th July 2023 and online application is 15th September. For further information, queries, or sponsorship (and its benefits), please do not hesitate to contact Dr Saugat Bhattacharyya (s.bhattacharyya(a)ulster.ac.uk<mailto:s.bhattacharyya@ulster.ac.uk>). This email and any attachments are confidential and intended solely for the use of the addressee and may contain information which is covered by legal, professional or other privilege. If you have received this email in error please notify the system manager at postmaster(a)ulster.ac.uk and delete this email immediately. Any views or opinions expressed are solely those of the author and do not necessarily represent those of Ulster University. The University's computer systems may be monitored and communications carried out on them may be recorded to secure the effective operation of the system and for other lawful purposes. Ulster University does not guarantee that this email or any attachments are free from viruses or 100% secure. Unless expressly stated in the body of a separate attachment, the text of email is not intended to form a binding contract. Correspondence to and from the University may be subject to requests for disclosure by 3rd parties under relevant legislation. The Ulster University was founded by Royal Charter in 1984 and is registered with company number RC000726 and VAT registered number GB672390524.The primary contact address for Ulster University in Northern Ireland is Cromore Road, Coleraine, Co. Londonderry BT52 1SA

June 6, 2023

Invitation for Hands-on Tutorial on PyNN at CNS*2023

by CHITARANJAN MAHAPATRA

*Dear all,* *We are delighted to announce that a half-day tutorial titled "Hands-on Tutorial on PyNN: A Simulator-Independent Language for Building Neuronal Network Models" will be held at the 32nd Annual Computational Neuroscience Meeting (CNS*2023 conference) in Leipzig, Germany. We invite all registered participants to join the tutorial, which will take place on the first day of the meeting, 15 July 2023, just before the main event.* *Computational neuroscientists have developed a diversity of software platforms for simulating neural network models at different scales. However, each simulator has its own programming or configuration language, leading to considerable difficulty in porting models from one simulator to another. A common programming interface to multiple simulators would help to reduce or eliminate the problems of simulator diversity while retaining the benefits. PyNN is such an interface, making it possible to write a simulation script once, using the Python programming language, and run it without modification on any supported simulator (currently including NEURON, NEST, Brian, and the SpiNNaker and BrainScaleS neuromorphic hardware systems).* *Prerequisites:* *Basic familiarity with the Python programming language* *Useful links:* *Main website: https://ebrains.eu/service/pynn/ <https://ebrains.eu/service/pynn/>* *Documentation: http://neuralensemble.org/docs/PyNN/ <http://neuralensemble.org/docs/PyNN/>* *Download: https://pypi.org/project/PyNN/ <https://pypi.org/project/PyNN/>* *Organizers:* *Chitaranjan Mahapatra (Neuroinformatics Group, Paris-Saclay Institute of Neuroscience, CNRS, Paris-Saclay University, France)* *Shailesh Appukuttan (Neuroinformatics Group, Paris-Saclay Institute of Neuroscience, CNRS, Paris-Saclay University, France)* *Andrew Davison (Neuroinformatics Group, Paris-Saclay Institute of Neuroscience, CNRS, Paris-Saclay University, France)* *Speakers/Instructors:* *Chitaranjan Mahapatra, Speaker (Paris-Saclay Institute of Neuroscience, France)* *Nitin Anisetty, Instructor (Indian Institute of Technology Bombay, India)* *We also invite all tutorial participants to create a free EBRAINS account using an institutional email address. By doing so, you will gain complete access to EBRAINS tools and services.* *Best regards,* *Chitraranjan* ------------------------------------------------------------------------------------------------- Chitaranjan Mohapatra

June 4, 2023

NEST Conference 2023 - registration deadline: 5 June 2023

by Hans Ekkehard Plesser

Dear all, This year's NEST Conference will again take place as a virtual conference on Thursday/Friday 15/16 June 2023. You can still register until Monday next week, June 5. More information on the program and how to register can be found on the conference website: https://nest-simulator.org/conference We are looking forward to seeing you all in June! Hans Ekkehard Plesser and the conference organizing committee -- Prof. Dr. Hans Ekkehard Plesser Head, Department of Data Science Faculty of Science and Technology Norwegian University of Life Sciences PO Box 5003, 1432 Aas, Norway Phone +47 6723 1560 Email hans.ekkehard.plesser(a)nmbu.no<mailto:hans.ekkehard.plesser@nmbu.no> Home http://arken.nmbu.no/~plesser

June 2, 2023

Spanish Agency of Research (AEI): ATRAE: Seeking Leading Researchers 1 Million Euros/per position

by Serafim Rodrigues

Dear all, The Spanish Agency of Research (AEI) has recently announced a competitive call for the attraction of senior researchers to Spanish institutions. Up to 25 positions. 1M€ per position. Gross salary 80.000 – 90.000 per year, and permanent position after the grant period 3 for 4 years. https://twitter.com/AgEInves/status/1654139691644403723?s=20 https://www.aei.gob.es/convocatorias/buscador-convocatorias/ayudas-incentiv… Conditions: PhD before Jan 1st, 2016 and have been professionally associated with foreign research organisations for at least 5 years in the period between Jan 1st 2016 and the starting date for the submission of applications. The Basque Center for Applied Mathematics (BCAM, Basque Country) would like to take this opportunity to invite leading researchers (for example ERC level candidates) to apply to BCAM. Interested researchers please contact us. Sincerely Serafim -- Serafim Rodrigues Ikerbasque Research Professor Mathematical, Computational and Experimental Neuroscience (MCEN) Group Leader *BCAM - *Basque Center for Applied Mathematics Alameda de Mazarredo, 14 E-48009 Bilbao, Basque Country - Spain Tel. +34 946 567 842 srodrigues(a)bcamath.org | www.bcamath.org/srodrigues | www.ikerbasque.net/serafim-rodrigues Old Mathematicians never die They just "tend to infinity" -Anonymous *(**matematika mugaz bestalde)*

June 2, 2023

Final call for submissions: CogFeel Workshop at ALIFE 2023 (extended deadline: June 06)

by Jie Mei

*Apologies for cross-posting* We have decided to extend the submission deadline of the CogFeel Workshop from May 26 to June 06. Workshop information: Venue: ALIFE 2023, Sapporo, Japan Submission deadline: June 06 Notification of acceptance: June 13 Workshop date: July 25th, 2023 Title: Cognitive feelings: Towards multi-disciplinary approaches for realizing artificial systems with cognitive capacities Website: https://sites.google.com/view/cogfeel-alife-2023/ Workshop organizers: Jie Mei, International Research Center for Neurointelligence, The University of Tokyo Hiroki Kojima, National Center of Neurology and Psychiatry and The University of Tokyo Yuichi Yamashita, National Center of Neurology and Psychiatry Yukie Nagai, International Research Center for Neurointelligence, The University of Tokyo Summary: In recent years, an increasing number of cross-disciplinary approaches have been proposed to deepen our understanding of living systems and their interactive, evolutionary, and adaptive aspects. However, we have not fully achieved the emergence of intelligence and mind in artificial systems. To facilitate discussions on how cognitive capacities of artificial living systems could be improved and potentially propose a framework for exploring the origin, emergence and evolution of perception and emotions, we are organizing a workshop (CogFeel @ ALIFE 2023: https://sites.google.com/view/cogfeel-alife-2023) in conjunction with the 2023 Conference on Artificial Life (ALIFE 2023). We reinforce the role of cognitive feelings (i.e., feelings about one’s mental processes, encompassing senses of knowing, confidence, reality, and fluency, etc.) as an integrated component contributing to developmental individuality and diversity. We also recognize the difficulty in implementing (subjective) feelings in artificial systems which requires the differentiation whether these systems possess feelings or just behave as so. For a comprehensive perspective on how individual- and population-level diversity in cognitive and behavioral capacities emerges, in this workshop, we encourage discussions on methods and findings in disciplines including but not limited to: - Robotics, - Computational and behavioral neuroscience, - Psychology, - Virtual/augmented reality, and - Artificial intelligence, etc. We welcome submissions on topics within the fields of (neuro)robotics, computational and behavioral neuroscience, psychology, virtual/augmented reality, and artificial intelligence. We also encourage contributions from other relevant disciplines. Submissions should be in the form of extended abstracts (maximum 2 pages) or research articles (maximum 8 pages). We are planning to organize a special issue in partnership with a top academic journal where extended versions of selected contributions will be published. Please submit your contribution to cogfeelalife2023(a)gmail.com. We look forward to seeing you at the CogFeel Workshop!

June 2, 2023

PhD / PostDoc position (4 years, 100%) in "ML / DL in Neuroimaging for Psychiatric Research" at Charité - Universitätsmedizin, Berlin

by Kerstin Ritter

Dear all, we offer a PhD / PostDoc position (4 years, 100%) at Charité - Universitätsmedizin (Berlin, Germany) in “Machine / Deep Learning in Neuroimaging for Psychiatric Research” in the framework of the TRR 265 "Losing and regaining control over drug intake". Please see the job advertisement below and forward to potential candidates. ____________________________________________________ Job opening: PhD / PostDoc Position (100%, 4 years) “Machine / Deep Learning in Neuroimaging for Psychiatric Research” We are seeking a highly motivated and talented individual to join our research team as a PhD student / Postdoc who would apply machine learning to substance addiction research. The successful candidate will have the opportunity to develop innovative and explainable machine/deep learning algorithms that can identify patterns and predictors of alcohol addiction and cannabis use disorder using structural brain MRI, Ecological Momentary Assessments (EMA), and psychometric questionnaires. A key aspect of this research will be accounting for confounding variables, such as age or comorbidities, to ensure robust and reliable results. This project is part of the TRR265 research consortium (https://www.trr265.org/en) The position will be in the lab of Prof. Dr. rer. nat. Kerstin Ritter (https://psychiatrie-psychotherapie.charite.de/en/research/translation_and_n…) Salary grade: TV-L E13 (100%) Starting date: August 01, 2023, for ~ 4 years Soft application deadline: June 25th, 2023 The position would remain open until filled. Qualifications: - Master’s degree with excellent grades in Computer Science, Data Science, Statistics, Physics, Computational Neuroscience or a related field - Experience with data analysis, visualization, and developing machine learning algorithms - Strong programming skills in Python and PyTorch, and experience working with linux servers and GitHub - Some prior experience with publishing research papers and working independently on open research questions - Excellent written and oral communication skills Ideal additional qualifications: - Familiarity with developing explainable deep learning algorithms and benchmarking model performance - Prior experience with psychiatric research - Prior experience with neuroimaging - Familiarity with analyzing healthcare data such as ecological momentary assessments and psychometric questionnaires -Prior experience with publishing open-source research code To apply, please submit: CV with contact information of 2-3 references Short motivation letter (max 1 page) mentioning the skills you can bring to this project Master’s / PhD degree transcript (if available) Please send your application asap to Roshan Rane (roshan.rane(a)charite.de) and Kerstin Ritter (kerstin.ritter(a)charite.de) _____________________________________________ Looking forward to your applications! Thank you, best wishes, Kerstin (Ritter) _______________________________________________ Prof. Dr. rer. nat. Kerstin Ritter (née Hackmack) Juniorprofessor for Computational Neuroscience Department for Psychiatry and Psychotherapy Charité Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin, and Berlin Institute of Health, Berlin, Germany Charitéplatz 1, 10117 Berlin, Germany kerstin.ritter(a)charite.de

June 1, 2023

Fw: New conference on subcortical sensory circuits, 2023, EMBL, Germany

by Maria Leite

[Apologies if you receive multiple copies of this Call for Participation] Dear colleagues, we invite you to participate in the Conference on Subcortical sensory circuits: visual, auditory, somatosensory, and beyond Date: November 28- December 1, 2023 Location: EMBL ATC, Heidelberg, Germany Conference website: https://www.embl.org/about/info/course-and-conference-office/events/ssc23-0… This conference will focus on different subcortical circuits involving various sensory modalities and revisit their increasingly complex and interconnected contributions to perception, behavior, and cognition. The meeting will take place at EMBL Headquarters in Heidelberg, Germany, and features many exciting speakers such as keynotes Karel Svoboda, Allen Institute, USA and Sabine Kastner, Princeton University, USA. Abstract Submission: Nearly half of the talks will be selected from the submitted abstracts. The submission can be made by visiting the conference website and the deadline is September 5. Registration: The registration for the conference is already open. Financial Support: Financial assistance in the form of fee waivers and travel grants is available.

May 30, 2023

Survey of user experiences in modeling

by Anton Arkhipov

Dear Colleagues, Our NIH BRAIN Initiative-sponsored project (1U24NS124001) is conducting an annual survey of the needs and experiences of users in neuroscience modeling. Would you be so kind to help us by filling out this brief survey? https://www.surveymonkey.com/r/2023NeuralModelingSoftware It will take only 5 minutes, and the results will help guide future development of software and documentation for the community. Whether you use our tools or not, an expert or novice in modeling, we’d love to hear from you! Thank you so much. If you have any questions, please feel free to reach out by email. Best regards, Anton. Anton Arkhipov Investigator E: antona(a)alleninstitute.org<mailto:antona@alleninstitute.org> [Text Description automatically generated] alleninstitute.org<https://alleninstitute.org> brain-map.org

May 30, 2023

Postdoc positions in ML/Neuro at Tübingen University

by Jakob Macke

Dear colleagues, We have several openings for Postdoctoral Researchers to work at the intersection of Machine Learning and Computational Neuroscience funded by the ERC Consolidator Grant “DeepCoMechTome: Using deep learning to understand computations in neural circuits with Connectome-constrained Mechanistic Models“. The goal of DeepCoMechTome is to develop simulation-based machine learning tools that will make it possible to build neural network models that are both biologically realistic and computationally powerful. Some relevant prior work can be found in https://www.biorxiv.org/content/10.1101/2023.03.11.532232v1. We are looking for candidates with a strong quantitative background and PhD in a relevant discipline, ideally in computational neuroscience, machine learning or numerical simulation, a genuine interest in collaborative work at the interface of machine learning and neuroscience, and strong programming skills (ideally Python and relevant deep learning frameworks). Our research group (https://www.mackelab.org <https://www.mackelab.org/>) develops methods in machine learning and artificial intelligence to accelerate scientific discovery, with a particular focus on neuroscience. We aim to provide an interdisciplinary, collaborative and supportive work environment which emphasizes diversity and inclusion. We are embedded in Tübingen’s internationally renowned research community in artificial intelligence and computational neuroscience, including the Cyber Valley Initiative, the Tübingen AI Center, the ELLIS initiative, the Excellence Cluster Machine Learning, the Bernstein Center for Computational Neuroscience, the Hertie Institute for AI in Brain Health and dedicated MSc Programs in Machine Learning and Computational Neuroscience. We are situated in the AI Research Building, in close proximity to the Max Planck Institutes for Intelligent Systems and Biological Cybernetics, and participate in the two International Max Planck Research Schools (IMPRS) `Intelligent Systems’ and`Mechanisms of Mental Function and Dysfunction’. The University of Tübingen is committed to equal opportunity, diversity and inclusion. In case of equal qualification and experience, physically challenged applicants are given preference. The University of Tübingen aims at increasing the share of women in science and highly encourages female scientists to apply. We also explicitly encourage scientists from outside Germany to apply. Please submit your application materials to mls-jobs(a)inf.uni-tuebingen.de <mailto:mls-jobs@inf.uni-tuebingen.de>, including a CV with publication list, a statement of research interests (max. two pages), contact details of two referees, and a link to a code repository (or work samples). Application deadline is June 20, 2023. Candidates are encouraged to send their application material early, as we will start reviewing applications before the deadline. Initial fixed-term contracts will be for 3 years at level E13 TV-L with possible extensions, starting date is flexible. Part-time positions are possible. Hiring is carried out by the Central Administration. For further details and instructions, see www.mackelab.org/jobs <http://www.mackelab.org/jobs>. Best, Jakob Macke Prof. Dr. Jakob Macke Machine Learning in Science; Cluster of Excellence "Machine Learning”, University of Tübingen Adjunct Senior Research Scientist, Department of Empirical Inference; Max Planck Institute for Intelligent Systems Tübingen Director, Bernstein Center for Computational Neuroscience www.mackelab.org <http://www.mackelab.org/>

May 26, 2023

Fully funded PhD Opportunity: Brain Dynamics and Motor Skill Learning in Surgery - deadline 8 June 2023

by aomurtag

An exciting PhD studentship position available in the Engineering department at Nottingham Trent University, United Kingdom, for highly competitive candidates with excellent qualifications. Application deadline: 8th of June 2023. Project title: Brain Dynamics and Motor Skill Learning in Surgery The project involves the use of EEG and fNIRS recordings from task performing human subjects and Matlab programming and signal analysis in order to discover patterns related to cognitive load and motor skill. For more information: NTU link: https://lnkd.in/gfbiYQRM Find-a-phd link: https://lnkd.in/gQgPrUiE Application instructions: https://lnkd.in/grUFevV5

May 25, 2023

Call for Abstracts for the Bernstein Conference 2023 in Berlin - Contributed talks and posters

by Bernstein Communication

Call for Abstracts for the Bernstein Conference 2023 in Berlin - Contributed talks and posters +++ The Bernstein Network Computational Neuroscience invites proposals for Contributed Talks of the Bernstein Conference 2023 in Berlin. +++ ____ Each year the Bernstein Network invites the international computational neuroscience community to the annual Bernstein Conference for intensive scientific exchange. It has established itself as one of the most renown conferences worldwide in this field, attracting students, postdocs and PIs from around the world to meet and discuss new scientific discoveries. www.bernstein-conference.de ____ IMPORTANT DATES * Bernstein Conference: September 26 - 29, 2023 * Deadline for submission of abstracts to be considered for Contributed Talks: June 21, 2023 * Deadline for poster abstract submission: July 19, 2023 ____ ABSTRACTS We invite the computational neuroscience community to submit their abstracts: Submitted abstracts can either be considered as contributed talks or posters. All accepted abstracts will be published online and will be citable via Digital Object Identifiers (DOI). Further information can be found here: https://bernstein-network.de/bernstein-conference/abstract-submission/<https://bit.ly/BC_submission> ____ INVITED SPEAKERS Keynote Marlene Cohen (University of Chicago, USA) Invited Talks Tiago Branco (Sainsburry Wellcome Center, UK) Stefano Fusi (Columbia University, USA) Ann Kennedy (Northwestern University, USA) Julija Krupic (University of Cambridge, UK) Wiktor Mlynarski (Institute of Science and Technology, Austria / LMU Munich, Germany) Adrien Peyrache (McGill University, Canada) Kanaka Rajan (Icahn School of Medicine at Mount Sinai, USA) Christopher Summerfield (University of Oxford and Deepmind, UK) Julia Veit (Albert-Ludwigs-Univesität Freiburg, Germany) ____ CONFERENCE COMMITTEE Robert Gütig (Conference Chair) Tatjana Tchumatchenko (Program Chair) Srdjan Ostojic (Program Vice Chair) Anna Levina (Workshop Chair) Maria Eckstein (Workshop Vice Chair) & Athena Akrami, Ann Hermundstad, Mehrdad Jazayeri, Christian Leibold, Ashok Litwin-Kumar, Ida Momennejad, Nicole Rust, Andrew Saxe, Daniela Vallentin, Friedemann Zenke. ____ For any further questions, please contact: bernstein.conference(a)fz-juelich.de -- Dr. Dorthe Kaufhold Scientific Management and Coordination Bernstein Network Computational Neuroscience | Bernstein Coordination Site Branch Office of the Forschungszentrum Jülich at the University of Freiburg Hansastr. 9a | 79104 Freiburg, Germany phone: +49 761 203-9589 mail: bernstein.communication(a)fz-juelich.de<mailto:bernstein.communication@fz-juelich.de> web: www.bernstein-network.de<http://www.bernstein-network.de> Twitter: BernsteinNeuro Mastodon: BernsteinNetwork(a)mastodon.world<mailto:BernsteinNetwork@mastodon.world> LinkedIn: Bernstein Network Computational Neuroscience, Germany ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Juelich GmbH 52425 Juelich Sitz der Gesellschaft: Juelich Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Stefan Müller Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender), Karsten Beneke (stellv. Vorsitzender), Dr. Ir. Pieter Jansens, Prof. Dr. Astrid Lambrecht, Prof. Dr. Frauke Melchior ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------

May 25, 2023

PhD position - Model-predictive control of brain plasticity for optimal non-invasive brain stimulation

by Caroline Lea-Carnall

We are looking for a PhD student to come and work with us at the University of Manchester. Please get in touch via the link below if you are interested! About the Project Neuroplasticity is the mechanism that underpins the brain’s ability to learn or recover from traumatic events, but also its deterioration underlies several Neurodegenerative diseases and mental illnesses. It is an umbrella term that encompasses multiple processes occurring at different spatial and temporal scales (1, 2). The most commonly discussed type of plasticity is long-term potentiation (LTP) which is defined as an increase in efficacy between synapses of two neurons. Experiments designed to measure LTP are often done in cell slices or cultures using patch-clamp techniques. However, we often want to promote (and measure) plasticity in humans in-vivo but it is not clear how changes in synaptic efficacy manifest in macroscopic non-invasive imaging measurements such as magnetic resonance imaging (MRI), magnetic resonance spectroscopy (MRS), or electroencephalography (EEG) that are available for use in humans. This project aims to link our detailed cellular-level knowledge of plasticity processes with systems-level observations in humans and is focused on answering the following 2 questions: 1. How can we modulate plasticity non-invasively in the brain? 2. How can we measure plasticity in vivo? To answer these questions you will combine mathematical/computational modelling of biophysically realistic large-scale neural networks that exhibit plasticity with cutting-edge neuroimaging techniques to test the model predictions. The model will be adapted so that its output can be compared to the three major imaging techniques described above and you will determine how changes in connectivity between and within brain regions in the model predict changes in our imaging metrics. There will be a particular focus on developing an EEG marker of plasticity as this currently does not exist. Finally, you will test the model predictions in an imaging study combining brain stimulation, EEG, MRI and MRS in a proof-of-concept experiment in humans. This will provide us with a deeper understanding of how to modulate and measure plasticity that can be deployed in the future for medical applications of brain stimulation such as in Parkinson’s disease, depression and pain control. Link to project: https://www.findaphd.com/phds/project/epsrc-dtp-model-predictive-control-of…

May 25, 2023

PhD and postdoc positions to investigate the biophysical basis of neural computation with machine learning

by pedro goncalves

Dear all, Our lab was recently founded at the Neuro-Electronics Flanders (NERF), Belgium. We are currently exploring a range of exciting topics at the intersection between computational neuroscience and probabilistic machine learning. In this context, we are looking for a PhD and a postdoc interested in using computational tools to investigate how the complex biophysics of single neurons gives rise to the dynamics of neural populations. These projects will make use of our previously developed machine learning methods, and depending on the selected candidates' interests, can involve further method development. More details about the positions and the lab can be found at http://jobs.vib.be/j/57438 http://jobs.vib.be/j/57439 Best wishes, Pedro Gonçalves --------------- Pedro Gonçalves Principal Investigator at NERF, a joint research initiative by imec, VIB, and KU Leuven https://goncalveslab.sites.vib.be/en

May 24, 2023