- Comp-neuro - lists.cnsorg.org

Three PhD projects in modelling brain diseases and brain development at Newcastle University

by Marcus Kaiser

Dear all, we are currently advertising the following three 4-year PhD positions for our lab with application deadlines early next year. The funding covers living expenses and UK/EU fees over four years and, using overseas research studentships, potentially also the higher fees for non-EU applicants. Students are chosen in competition with students who choose projects in other fields, which means that we would particularly encourage strong applicants with very good academic marks and previous research experience to apply. Please follow the links below for more information. *Newcastle-DTA PhD studentships* (1) Building brains: Which developmental pathways lead to better performance in information processing? <http://www.ncl.ac.uk/sage/study/postgrad/dta/documents/2016-Kaiser-122.pdf> (School: Computing Science Ref: DTA122) Within this project, a student will help to develop detailed simulations of brain network development. In addition, the student will test the performance of the grown networks on visual tasks. Through this, we will investigate (a) how developmental mechanisms are linked to the resulting topology and (b) how the resulting network is linked to processing performance. As a result, we will get a better understanding how changes during development are linked to brain architecture and how they can lead to cognitive deficits. Supervisors: Prof. Marcus Kaiser, Dr Gavin Clowry, and Dr Roman Bauer (2) Predicting patient outcomes following traumatic brain injury <http://www.ncl.ac.uk/sage/study/postgrad/dta/documents/2016-Kaiser-123.pdf> (School: Computing Science Ref: DTA123) In this study we will investigate the impact of simulated brain lesions using human brain connectivity data and computer simulations. We shall aim to produce biomarkers for patient outcomes. These techniques may hive wider applications in stroke, multiple sclerosis and ageing. Supervisors: Prof. Marcus Kaiser and Dr Peter Taylor Please *apply by 22 January* at http://www.ncl.ac.uk/sage/study/postgrad/dta/ *Newcastle-Singapore PhD studentships* (3) Improving surgery in focal epilepsy using computational modelling <http://www.ncl.ac.uk/sage/study/postgrad/singapore/documents/Improvingsurge…>(School: Computing Science Ref: NSS12) In this project we shall attempt to predict which patients will be seizure free after surgery. For those patients predicted to be not seizure free we shall suggest alternative strategies for surgery. See also our recent article in PLOS CB: http://www.ploscompbiol.org/article/metrics/info%3Adoi%2F10.1371%2Fjournal.… Supervisors: Dr. Peter Taylor, Prof. Marcus Kaiser, and Asst. Prof. Justin Dauwels (NTU, Singapore). The student will be based at Newcastle but also visit Singapore Please *apply by 26 February* at http://www.ncl.ac.uk/sage/study/postgrad/singapore/ *Research Environment* There are currently 12 faculty members with a link to neuroinformatics and computational neuroscience. Using computational models for clinical applications is a strong interest of our group (see http://neuroinformatics.ncl.ac.uk/ for an overview). Students will be based in the School of Computing Science, which was ranked #9 for research and #1 for impact in the recent UK Research Excellence Framework evaluation, as part of the ICOS Group (http://ico2s.org/ ). They will also be affiliated with the Institute of Neuroscience which integrates more than 100 principal investigators across medicine, psychology, computer science, and engineering and which was ranked #9 overall and #5 for impact in the UK ( http://www.ncl.ac.uk/ion/) Newcastle University, with 20,000 students, lies in the city of Newcastle-upon-Tyne -- an area in the North-East of England with around one million inhabitants. The university is at the centre of Newcastle which itself is on the main train-line between London and Edinburgh, 20 minutes away from both the airport and the sand beach by public transport ( http://www.ncl.ac.uk/about/visit/city/ ). We also offer a one-year master programme in Computational Neuroscience and Neuroinformatics (http://www.ncl.ac.uk/computing/study/postgrad/taught/5199/ ) which is now accepting applications.

Dec. 16, 2015

DENDRITES 2016, June 18-21, Crete: CALL FOR ABSTRACTS

by Yiota Poirazi

Please distribute to potentially interested parties and email lists. Many thanks! Looking forward to welcoming you in Crete! On behalf of the organizing committee, Yiota Poirazi ------------------------------------------------------- EMBO Workshop on Dendritic Anatomy, Molecules and Function (DENDRITES 2016) Heraklion, Crete, Greece June 18-21, 2016 http://dendrites2016.gr/ <http://www.dendrites2016.gr/> * * * * * *CALL FOR ABSTRACTS* * * * * * Abstract submission for poster and oral presentation is open until *February 15, 2016* This EMBO Workshop brings together scientific leaders to present their research on dendrites, at the molecular, anatomical and biophysical level. Apart from scientific talks from top experts in the field, the meeting includes a full day dedicated to Career Issues in academia. This session features talks from the current President of FENS as well as young Neuroscientists from theFENS-Kavli Network of Excellence <http://www.fens.org/Outreach/FENS-Kavli-Network-of-Excellence/> that are dealing with such issues. _Invited speakers (scientific talks): _ Claudia Clopath Daniel Dombeck Casper Hoogenraad Arthur Konnerth Attila Losonczy Judit Makara Rishikesh Narayanan Elly Nedivi Jackie Schiller Erin Schuman Idan Segev Nelson Spruston Greg Stuart _Invited speakers (Career Issues in academia):_ Monica Di Luca, FENS President: "Publication issues: right time for a reality check" Camilla Belone, FENS-Kavli Scholar: "Retention of women in high levels of neuroscienceÂ - Perspectives" Emre Yaksi, FENS-Kavli Scholar: "Funding opportunities in Neuroscience: how to write a successful grant proposal" CALL FOR ABSTRACTS We are soliciting abstracts for oral and poster presentations. We welcome both experimental and theoretical contributions addressing novel findings, methods or databases related to dendrites that fall into one or more of the following domains: * morphological and functional characterizations, * dendritic integration and compartmentalization, * dendritic channel distribution and their functional implications, * molecular pathways and signaling networks, * RNA trafficking and local protein synthesis, * functional or structural plasticity and homeostasis, * the role of dendrites in complex processes, including learning/memory, neural computations etc. Please note that places are limited and subject to availability. Attendees are highly encouraged to submit abstracts for presentations, since presenters will be given priority for registration. Instructions for on-line submission can be found at http://www.dendrites2016.gr/call-for-papers *Important dates * * Abstract submission opens: December 15th, 2016 * Abstract submission closes: February 15th, 2016 * Notification of abstract acceptance: February 29th, 2016 * Notification of oral/poster presentation: early March 2016 _Organizing committee:_ Yiota Poirazi, IMBB-FORTH Michael Hausser, UCL * * Matthew Larkum, Humboldt University IMPORTANT NOTE: The Workshop takes place on the island of Crete and is followed by the AREADNE 2016 meeting <http://areadne.org/> (June 22-26th, 2016), focusing on Research in Encoding And Decoding of Neural Ensembles, on the neighboring island of Sandorini. DENDRITES 2016 participants are encouraged to consider attending both meetings. FOR FURTHER INFORMATION Please see the conference web site http://dendrites2016.gr/ <http://www.dendrites2016.gr/> or send an email to info(a)dendrites2016.gr <mailto:info@dendrites.gr> -- Panayiota Poirazi, Ph.D. Director of Research Computational Biology Laboratory Institute of Molecular Biology and Biotechnology (IMBB) Foundation of Research and Technology-Hellas (FORTH) Vassilika Vouton, P.O.Box 1385 GR 711 10 Heraklion, Crete, GREECE Tel: +30 2810 391139 <tel:+30%202810%20391139> Fax: +30 2810 391101 <tel:+30%202810%20391101> Εmail: poirazi(a)imbb.forth.gr <mailto:poirazi@imbb.forth.gr> http://www.dendrites.gr Chair http://www.fens.org/Outreach/FENS-Kavli-Network-of-Excellence/

Dec. 16, 2015

Postdoctoral fellowships in computational neuroscience at the University of Washington

by Adrienne Fairhall

We invite applications for the Washington Research Foundation Innovation Postdoctoral Fellowships in Neuroengineering at the University of Washington in Seattle. These fellowships are offered as part of the UW Institute for Neuroengineering, which aims to stimulate research excellence in the development of novel approaches to the understanding and manipulation of brain function. These highly selective fellowships fund research in computational and engineering approaches to neuroscience; joint mentoring between faculty in different disciplines (CS, engineering, mathematics, biology) is strongly encouraged. The fellowships provide two years of funding including a $65,000 annual salary and a $25,000 research stipend. Applications are due by January 15, 2016. Please see http://uwin.washington.edu/post-docs/ for more information.

Dec. 16, 2015

postdoc position with BRAIN project at Emory University

by Jaeger, Dieter

A postdoctoral position is available for working in an NIH funded Obama BRAIN initiative project on the role of the basal ganglia in motor decision making in behaving mice (https://projectreporter.nih.gov/project_info_description.cfm?icde=0&aid=901…) The project aims to elucidate how subcortical structures feed back onto and influence cortical processing. The position will involve multisite recording and optogenetics in behaving mice in the Jaeger lab at Emory University, which provides a strong training environment in computational and systems neuroscience in collaboration with the Georgia Institute of Technology. The successful candidate needs previous electrophysiological experience and strong data analysis skills using Matlab or Python. A PhD in Biomedical Engineering or Neuroscience is preferred. If interested & qualified, please contact djaeger(a)emory.edu. Dieter Jaeger, PhD Professor Department of Biology, Emory University 1510 Clifton Rd., Atlanta, GA 30322 404 727 8139, e-mail: djaeger(a)emory.edu<mailto:djaeger@emory.edu> http://www.biology.emory.edu/research/Jaeger ________________________________ This e-mail message (including any attachments) is for the sole use of the intended recipient(s) and may contain confidential and privileged information. If the reader of this message is not the intended recipient, you are hereby notified that any dissemination, distribution or copying of this message (including any attachments) is strictly prohibited. If you have received this message in error, please contact the sender by reply e-mail message and destroy all copies of the original message (including attachments).

Dec. 15, 2015

Postdoc in Computational Neuroscience/ Robotics

by Sen Cheng

A postdoctoral position in computational neuroscience/ robotics is available immediately in the research unit of Prof. Sen Cheng in the Institute for Neural Computing at the Ruhr University Bochum in Germany. For further information see www.rub.de/cns. The postdoc will study spatial navigation and learning in robots using biologically realistic algorithms. The focus will be on understanding the neural mechanisms underlying spatial navigation and learning in mammals, in particular, the role of the hippocampus in these processes. The salary will be on the standard German pay scale of TV-L E13. The full-time position is available immediately for two years with the possibility of extension. Limited teaching in computational neuroscience and/ or robotics is required. Candidates should have a doctoral degree in neuroscience, robotics, computer science, physics, or a related field. Competence in mathematical modeling, and excellent programming skills are mandatory. Familiarity with robotics and computational neuroscience would be a further asset. To apply please send a statement of your motivation and research interests, academic transcripts, and a complete CV to sen.cheng(a)rub.de in a single PDF file. Please, also request from at least two academic referees that they send letters of reference directly to the same email address. The Ruhr University Bochum is committed to equal opportunity. We strongly encourage applications from qualified women and persons with disabilities. --- Prof. Dr. Sen Cheng Ruhr-University Bochum Mercator Research Group "Structure of Memory" Universitaetsstr. 150 44801 Bochum Germany office: GA 04/48 | +49-234- 32 27136 | FAX: +49-234- 32 07136 sen.cheng(a)rub.de | http://www.rub.de/cns

Dec. 15, 2015

BRAIN Initiative post-doctoral position

by Joshua Gold

The Gold lab (http://www.med.upenn.edu/goldlab <http://www.med.upenn.edu/goldlab>) at the University of Pennsylvania is looking for an energetic and talented post-doc to participate in a funded BRAIN Initiative grant studying neural mechanisms of individual differences in learning and decision-making (http://www.nsf.gov/news/news_summ.jsp?cntn_id=135926 <http://www.nsf.gov/awardsearch/showAward?AWD_ID=1533623>). The work will combine psychophysics, single-unit electrophysiology, and computational modeling. A strong background in systems neuroscience is preferred. Anyone interested should contact Joshua Gold directly via e-mail (jigold(a)mail.med.upenn.edu <mailto:jigold@mail.med.upenn.edu>). Please include a CV and cover letter stating your research experience and reasons for applying to this position. Also please be prepared to provide contact information for up to three references upon request. Penn has a rich and interactive environment for both systems and computational neuroscience, with journal clubs, lab meetings, retreats, and other joint activities, many of which are organized by our new Computational Neuroscience Initiative (CNI: http://cni.upenn.edu <http://cni.upenn.edu/>). We also value diversity and seek talented individuals from diverse backgrounds (http://jobs.hr.upenn.edu <http://jobs.hr.upenn.edu/>).

Dec. 14, 2015

Telluride Neuromorphic Cognition Engineering Workshop 2016: Call for Topics

by Ralph Etienne-Cummings

Call for Topic Area Proposals 2016 Neuromorphic Cognition Engineering Workshop *Telluride, Colorado, June 26 –July 16, 2016* *DEADLINE: January 8th, 2016* We are now accepting proposals for Topic Areas in the 2016 Telluride Neuromorphic Cognition Engineering Workshop. We support topics and projects in neuromorphic cognition, particularly those that involve solving challenging ‘everyday’ tasks that incorporate domain-specific knowledge, exploration, prediction, and problem solving. In particular, we are interested in projects that hold promise for addressing Grand Challenge types of problems that do not have strong solutions of any form, neuromorphic or not. These Challenge problems should feature long-duration sensorimotor problems that involve autonomous cognitive decision making. Examples might include tasks such as learning a new language, navigating through an unknown environment to locate an object or reach a desired location, visual and auditory understanding of human actions, adaptively manipulating unknown or complex objects in the service of a task, playing a game requiring inference of hidden information or long-term planning and learning, etc. Proposals related to hardware technologies that aim to bring these capabilities to reality are also encouraged. Topic proposals that aim to solve a particular problem using the multidisciplinary experience of participants will be favored over topics that simply gather a large number of people working within a discipline, or using a single technology, or approach. Topic areas for this summer's Telluride Neuromorphic Cognition Engineering Workshop <http://ine-web.org/> will be chosen from proposals submitted to the organizers. *Topic areas can span a large field; we are looking for leadership in planning activities and inviting good people in a field.* Although past topic areas have tended to be very broad and discipline-oriented (e.g., cognition, audition, vision, robotics, neural interfacing, neuromorphic VLSI, etc.), application-oriented topic areas (e.g., sensor fusion, game-playing robot, object recognition, sound localization, human robot interaction, etc.) are especially desirable. *Topic area leaders will receive housing for themselves and their invitees, and limited travel funds.* Topic area leaders will help to define the field of neuromorphic cognition engineering through the projects they pursue and the people they invite. They shape their topic by inviting speakers and project leaders (the *invitees*) and by initiating topic area project discussions prior to the workshop. Teams of two organizers are required. One of the organizers should be an attendee of a previous Telluride Workshop (in any capacity) and has stayed at the Workshop for at least one week. *Pre-workshop topic area choices and study assignments.* Before the workshop begins, each topic area will be required to prepare and distribute study materials that constitute: 1) an introductory presentation (e.g., pptx, video, review paper) of the fundamental knowledge associated with the topic area that *everyone at the workshop* should be exposed to, and 2) a few critical papers that the participants in the topic area should read before the workshop. The topic area should 3) begin a serious group discussion of the projects (e.g., via Facebook, Skype, email, etc). *The maximum 2-page proposals should include:* 1. Title of topic area. 2. Names of the two topic leaders, their affiliations, and contact information (email addresses). 3. A paragraph explaining the focus and goals of the topic area. 4. A list of possible specific topic area projects. 5. A list of example invitees (up to six names and institutions). No commitments necessary. 6. Any other material that fits within the two-page limit that will help us make a smart choice. *Send your topic area proposal* in pdf or text format to organizers13(a)neuromorphs.net <organizers12(a)neuromorphs.net> with subject line containing "topic area proposal". *Proposals must be received by January 8, 2016*; proposals received after the deadline may still be considered if space is available. *We expect to accept 4-5 topic areas*, each with 5 invitees*.* If your proposal for the topic area is not accepted, we will work with you to see if there is a natural way to include your ideas (and you) into the accepted topic areas. We hope to have significant turn-over each year in the topic areas and leaders to ensure fresh new ideas and participants. See the Institute of Neuromorphic Engineering (www.ine-web.org) for background information on the workshop and neuromorphs.net <https://neuromorphs.net/ws2009/wiki/PastWorkshops> for past workshop wikis. We look forward to your topic proposals! *Deadline: January 8, 2016* *The Workshop Directors:* Cornelia Fermüller <http://www.cfar.umd.edu/~fer/> (University of Maryland), Ralph Etienne-Cummings <http://etienne.ece.jhu.edu/people/ralph/index.html> (Johns Hopkins Univ.) Shih-Chii Liu <https://www.ini.uzh.ch/~shih/> (University of Zurich and ETH Zurich), Timmer Horiuchi <https://www.isr.umd.edu/faculty/horiuchi> (University of Maryland), Katalin Gotthard <http://physiological-sciences.arizona.edu/katalin-gothard> (University of Arizona), Michael Pfeiffer <https://www.ini.uzh.ch/~pfeiffer/index.html> (University of Zurich and ETH Zurich), Francisco Barranco <fbarranco(a)ugr.es> (University of Granada) *Former 2007-2013 Workshop Director: * Tobi Delbruck <https://www.ini.uzh.ch/~tobi/> (University of Zurich and ETH Zurich) -- Ralph Etienne-Cummings, PhD, FIEEE Professor and Chairman Department of Electrical and Computer Engineering Computational Sensor Motor Systems Lab Laboratory for Computational Sensing and Robotics The Johns Hopkins University Baltimore, MD [image: cid:image001.png@01CFC064.B58B46A0]

Dec. 14, 2015

four postdoctoral positions available at the University of Göttingen

by Schloegl, Christian

The Georg-August-University Göttingen, the German Primate Center and the Bernstein Center for Computational Neuroscience are looking to fill four positions of Postdoctoral fellows The postdoctoral fellows will be associated with the Cognitive Ethology Laboratory (Julia Fischer, www.dpz.eu/de/abteilung/kognitive-ethologie<http://www.dpz.eu/de/abteilung/kognitive-ethologie>), the Cognitive Neuroscience Laboratory (Stefan Treue, www.dpz.eu/cnl<http://www.dpz.eu/cnl>), including the Sensorimotor Group (Alexander Gail, www.dpz.eu/smg<http://www.dpz.eu/smg>) and the Decision and Awareness Group (Igor Kagan, www.dpz.eu/dag<http://www.dpz.eu/dag>), at the University of Göttingen and the German Primate Center, or the Theoretical Neurophysics Group (Fred Wolf, https://www.uni-goettingen.de/en/58058.html) at the Bernstein Center for Computational Neuroscience. All positions are at pay grade 13 TV-L, full-time (currently 39, 80 hours per week) for an initial duration of 2 years and are available immediately. Your project We are recruiting postdoctoral fellows for an interdisciplinary research project studying social interactions and decision-making in human and non-human primates. For this purpose, a novel experimental platform is to be developed for behavioral (and with the later option of electrophysiological / stimulation) studies of sensorimotor decision-making in cooperative and competitive social interaction settings, across humans and different non-human primate species. We are searching for two postdoctoral fellows with an experimental or engineering background to develop this innovative experimental platform by integrating several technological (e.g., eye-tracking, hand motion tracking, real-time behavior-contingent visual stimuli, etc.) and methodological approaches (e.g., from neurosciences, behavioral biology and psychology) into a single experimental tool. Two postdoctoral fellows with a mathematical or theoretical background are expected to develop a mathematical framework and the computational tools for the analysis of large-scale multimodal data streams to be generated through the platform and from other sources. Your profile We are looking for highly motivated, enthusiastic and creative researchers with strong experimental and/or analytical skills. Good command of written and spoken English is a must, German is a plus. The ability to work in an interdisciplinary team and the capacity to supervise students and technical personnel is expected. Successful candidates for the development of the experimental platform should have a PhD in cognitive science, psychology, behavioral biology, neuroscience or related fields. Demonstrable experience with designing, conducting and analyzing behavioral experiments in humans and/or non-human primates is essential; programming skills and an understanding of hardware and software integration in real-time experimental systems is beneficial; a prior experience in studying social interactions is of additional value. Successful candidates for the development of computational tools should have a PhD in computational neuroscience, physics, mathematics, informatics, statistics, or related fields. Advanced knowledge of stochastic dynamics, systems and signal theory, as well as excellent computational skills are required. Extensive experience with the analysis of complex data streams is a plus. Ideal candidates will be driven by a genuine interest in theoretical approaches to complex biological systems. The project is embedded in the recently established Leibniz ScienceCampus "Primate Cognition" (www.primate-cognition.eu/en<http://www.primate-cognition.eu/en>) that encompasses a wide range of Göttingen researchers from multiple disciplines interested in understanding primate cognitive functions. Due to a highly collaborative and interdisciplinary nature of the project, and the recent upsurge of interest in the social aspects of decision-making and goal-directed actions both locally and in the international scientific community, it promises to be very visible. While the fellow positions are available for two years, the goals and the underlying framework of the project are a central part of the long-term commitment of the "Primate Cognition" scientific community and are expected to be continued. The University of Göttingen is an equal opportunities employer and places particular emphasis on fostering career opportunities for women. Qualified women are therefore strongly encouraged to apply as they are underrepresented in this field. Disabled persons with equivalent aptitude will be favored. The positions are generally suitable for part-time employment. Please send your application with the usual documents submitted as a single PDF file via email to the ScienceCampus coordinator, Dr. Christian Schloegl (cschloegl(a)dpz.eu<mailto:cschloegl@dpz.eu>), with the subject "Application social decision-making". Application deadline is January 31st, 2016. Three months after completion of the application process, submitted application material will be deleted. If you have any questions, please contact Dr. Christian Schloegl (cschloegl(a)dpz.eu<mailto:cschloegl@dpz.eu>; phone: +49-551-3851-480). _________________________________ Dr. Christian Schloegl Leibniz-WissenschaftsCampus Primatenkognition Deutsches Primatenzentrum GmbH Leibniz-Institut für Primatenforschung Kellnerweg 4, 37077 Göttingen Tel: +49 551 3851-480 Fax: +49 551 3851-489 E-Mail: cschloegl(a)dpz.eu<mailto:cschloegl@dpz.eu> http://www.primate-cognition.eu<http://www.primate-cognition.eu/> Vorsitzender des Aufsichtsrates: MDgt Rüdiger Eichel Geschäftsführer: Prof. Dr. Stefan Treue, Assessor jur. Michael Lankeit Sitz der Gesellschaft: Göttingen Handelsregister: Göttingen HRB 933

Dec. 14, 2015

Postdoctoral positions at the interface of algebraic topology and theoretical neuroscience at Penn State

by Vladimir Itskov

Dear colleagues, Applicants are invited for postdoctoral positions at the interface of theoretical neuroscience and algebraic topology or applied algebra. An ideal candidate is a mathematics Ph.D. with background in areas such as algebraic topology, geometry, commutative algebra, or combinatorics. Prior familiarity with neuroscience is not required, but interest in learning the relevant background is expected. The postdoctoral fellow will engage in the development of novel mathematical methods for understanding neural coding and neural networks. To apply, please submit your application via the mathjobs.org website in response to the job ad http://www.mathjobs.org/jobs/jobs/7575 See also http://sites.psu.edu/mathneurolab/ for more information. __________________________________ Vladimir Itskov Associate Professor of Mathematics The Pennsylvania State University email: vladimir.itskov(a)psu.edu http://www.personal.psu.edu/vui1 __________________________________

Dec. 12, 2015

faculty positions at Penn State

by Vladimir Itskov

---------- Forwarded message ---------- Date: Wed, 9 Dec 2015 14:57:49 -0500 From: "Adam Smith (CSE)" <asmith(a)cse.psu.edu> Subject: data science/ML and cognitive science faculty positions at Penn State -- talk to us at NIPS! Penn State will be hiring multiple faculty in "data science" and "brain science", broadly defined. There are open positions in the department of Computer Science & Engineering as well as Statistics, and positions have the potential to be joint with other departments at Penn State. The ad for the CSE department follows. I will be at NIPS on Thursday (11am poster session) and Friday (at the workshop on adaptive data analysis). Send me an email if you'd like to talk! Adam Smith -- Penn State Computer Science & Engineering http://www.cse.psu.edu/~asmith Links: https://psu.jobs/job/60027 http://eecs.psu.edu/departments/EECS-Departments-Employment-Opportunities.a… http://cra.org/job/pennsylvania-state-university-faculty-position-vacancies/ =========================== Applications are invited for several tenure-track faculty positions at all ranks. Outstanding candidates in all areas of Computer Science and Engineering will be considered. Areas of particular interest are: hardware systems, computer architecture/embedded systems, software systems, brain science, data science, and security with applications to networking, systems and data analytics. Faculty lines in the areas of architecture/embedded systems, data science, and networking will be hired jointly with the Department of Electrical Engineering in the School of Electrical Engineering and Computer Science. Hiring in the brain science (especially around the analyses of imaging data) and the security of large-scale cyberphysical systems (including smart grids and food-water-energy systems), will be jointly hired with the Institute for CyberScience. These positions are part of a university-wide initiative to appoint exceptional candidates who can advance algorithms, software and hardware systems with a demonstrated commitment to participating in interdisciplinary research (see www.ics.psu.edu/hire.html) The department has 30 tenure-track faculty in the major areas of computer science and engineering. Fourteen members of our faculty are NSF Career Award recipients. Three faculty members from the department have received the prestigious NSF PECASE Award. In recent years, faculty in the department were awarded several large-scale research grants, including the Collaborative Research Alliance for the Science of Security, a Collaborative Technology Alliance for Network Science and an NSF Expeditions in Computing award. Further, the faculty have received awards in computing and research infrastructure and instrumentation grants from NSF, and are part of DARPA/STARNET Center, an NSF ERC and NSF IGERT team. The faculty are highly successful in obtaining funding from NSF, DARPA, ARL, DOE, DTRA, AFOSR and AOR. There are state-of-the-art research labs for computer systems, computer vision and robotics, microsystems design and VLSI, networking and security, high performance computing, bioinformatics and virtual environments. The department offers a graduate program with 30 Masters students and 132 Ph.D. students, and undergraduate programs in computer science and computer engineering. The university is committed to growing the faculty ranks and promoting interdisciplinary research toward cyber-enabled discovery and design. Penn State is a major research university and is ranked 3rd in the nation in industry-sponsored research and 8th in the nation in research expenditures. U.S. News and World Report consistently ranks Penn State?s College of Engineering undergraduate and graduate programs among the top in nation. Penn State is ranked 5th world wide in Computer Science Citations according to Thomson-Reuters. The university is located in the beautiful college town of State College in the center of Pennsylvania. The State College area has 130,000 inhabitants and offers a wide variety of cultural and outdoor recreational activities. The university offers outstanding events from collegiate sporting events to fine arts productions. Many major population centers on the east coast (New York, Philadelphia, Pittsburgh, Washington D.C., Baltimore) are only a few hours drive away and convenient air services to several major hubs are operated by three major airlines out of State College. Applicants should hold a Ph.D. in computer science, computer engineering, or a closely related field and should be committed to excellence in both research and teaching. Support will be provided to the successful applicants for establishing their research programs. We strongly encourage dual career couples and candidates from underrepresented groups to apply. Applicants should submit a statement of professional interests, curriculum vitae, and the names and addresses of four references. Please submit these items in a single PDF file electronically at http://apptrkr.com/681413. Nominations and applications will be considered until the positions are filled. If you have questions regarding the application process, please email recruiting(a)cse.psu.edu. Penn State is an equal opportunity, affirmative action employer, and is committed to providing employment opportunities to all qualified applicants without regard to race, color, religion, age, sex, sexual orientation, gender identity, national origin, disability or protected veteran status.

Dec. 12, 2015

MICCAI 2016 - Call for Papers and Workshop/Tutorial/Challenge Proposals

by Devrim Unay

[Apologies for cross posting] We are writing to invite you to participate in *MICCAI 2016*, the 19th International Conference on Medical Image Computing and Computer Assisted Intervention, which will be held from *October 17th to 21st, 2016 in Istanbul, Turkey*. Call for papers can be found here: http://miccai2016.org/en/CALL-FOR-PAPERS.html. The paper submission deadline is *March 10, 2016*. Call for workshop/tutorial/challenge proposals can be found here: http://miccai2016.org/en/SATELLITE-EVENTS.html. The proposal submission deadline is *January 19, 2016*. For the latest information, please refer to our website: http://miccai2016.org. Also, please follow us on Facebook <https://www.facebook.com/groups/1050034681703084/> and Twitter <https://twitter.com/MICCAI2016>. We look forward to welcoming you to Istanbul in October 2016! On Behalf of the MICCAI 2016 Organizing Committee Sebastien Ourselin General Chair

Dec. 12, 2015

1st call for papers: PRNI 2016

by Jo Etzel

******* please accept our apologies for cross-posting ******* ------------------------------------------------------------------------------ FIRST CALL FOR PAPERS PRNI 2016 6th International Workshop on Pattern Recognition in Neuroimaging 22-24 June 2016 Fondazione Bruno Kessler (FBK), Trento, Italy www.prni.org - @PRNI2016 - www.facebook.com/PRNI2016/ ------------------------------------------------------------------------------ Paper submission deadline: 18 March 2016, 11:59 pm PST Acceptance notification: 22 April 2016 Camera-ready paper deadline: 7 May 2016 Oral and poster sessions: 22-24 June 2016 Pattern recognition techniques have become an important tool for neuroimaging data analysis. These techniques are helping to elucidate normal and abnormal brain function, cognition and perception, anatomical and functional brain architecture, biomarkers for diagnosis and personalized medicine, and as a scientific tool to decipher neural mechanisms underlying human cognition. The International Workshop on Pattern Recognition in Neuroimaging (PRNI) aims to: (1) foster dialogue between developers and users of cutting-edge analysis techniques in order to find matches between analysis techniques and neuroscientific questions; (2) showcase recent methodological advances in pattern recognition algorithms for neuroimaging analysis; and (3) identify challenging neuroscientific questions in need of new analysis approaches. PRNI welcomes submissions on topics including, but not limited to: * Learning from neuroimaging data - Algorithms for brain-state decoding or encoding - Optimization and regularization - Bayesian analysis of neuroimaging data - Causal inference and time delay techniques - Network and connectivity models (the connectome) - Dynamic and time-varying models - Dynamical systems and simulations - Empirical mode decomposition, multiscale decompositions - Combination of different data modalities - Efficient algorithms for large-scale data analysis * Interpretability of models and results - High-dimensional data visualization - Multivariate and multiple hypothesis testing - Summarization and presentation of inference results * Applications - Disease diagnosis and prognosis - Real-time decoding of brain states - Analysis of resting-state and task-based data - MEG, EEG, structural MRI, fMRI, diffusion MRI, ECoG, NIRS Authors should prepare full papers with a maximum length of 4 pages (two column IEEE style) for double-blind review. The manuscript submission deadline is 18 March 2016. Accepted manuscripts will be assigned either to an oral or poster sessions; all accepted manuscripts will be included in the workshop proceedings. -- Joset A. Etzel, Ph.D. Research Analyst Cognitive Control & Psychopathology Lab Washington University in St. Louis http://mvpa.blogspot.com/

Dec. 11, 2015

Postdoc in mathematical neuroscience at the University of Houston/UC, Boulder

by Kresimir Josic

We are looking for a postdoctoral associate with a background in applied mathematics and/or computational neuroscience. The successful applicant will work with Krešimir Josić at the University of Houston and Zack Kilpatrick at the University of Colorado at Boulder. The goal of the project is to use linear response theory and its extensions to predict how patterns of activity and structure of neuronal networks co-evolve. This is a collaborative project with Brent Doiron (Pitt) and Eric Shea-Brown (UW, Seattle). The deadline for applications is January 15, 2016. This position is expected to run September 1, 2016 through August 31, 2018. Interested applicants can apply online at at the University of Houston jobs website: https://jobs.uh.edu/postings/28856 <https://jobs.uh.edu/postings/28856> Please contact Krešimir Josić (josic(a)math.uh.edu <mailto:josic@math.uh.edu>) or Zack Kilpatrick (zpkilpat(a)math.uh.edu <mailto:zpkilpat@math.uh.edu>) if you have any questions. The University of Houston is an Equal Opportunity/Affirmative Action institution. Minorities, women, veterans and persons with disabilities are encouraged to apply. Additionally, the University prohibits discrimination in employment on the basis of sexual orientation, gender identity or gender expression. -- ** Krešimir Josić ** Department of Mathematics ** University of Houston ** http://math.uh.edu/~josic ** Tel: (713) 743-3485

Dec. 11, 2015

PhD at Edinburgh on data analysis

by Matthias Hennig

A funded PhD position is available at the University of Edinburgh to develop and implement efficient paralellised methods for analysis of large scale, high density multielectrode array recordings. The project will focus on analysis of primary raw data from a 4,096 channel array, and aims at improving spike detection and sorting, and statistical analysis of multi-neuron activity. Data will come from the labs of Evelyne Sernagor (Newcastle, retina) and Luca Berdondini (IIT Genova, cultured networks). Applicants should have a strong quantitative background and interest in interdisciplinary research. Background in neuroscience and/or parallel programming is desirable, but not essential. This position is available to UK/EU applicants, and eligible for funding by the EPSRC CDT in Pervasive Parallelism. Interested individuals should send a c.v., statement of interest and the names of three references to Matthias Hennig (h.hennig(a)ed.ac.uk) Apply by 1 February 2016. PPar http://pervasiveparallelism.inf.ed.ac.uk/ J.-O. Muthmann, H. Amin, E. Sernagor, A. Maccione, D. Panas, L. Berdondini, U.S. Bhalla, M.H. Hennig (2015). Spike detection for large neural populations using high density multielectrode arrays. Front Neuroinform, 9:28. http://journal.frontiersin.org/article/10.3389/fninf.2015.00028/abstract D. Panas, H. Amin, A. Maccione, O. Muthmann, M. van Rossum, L. Berdondini, M.H. Hennig (2015). Sloppiness in spontaneously active neuronal networks. J Neurosci, 35(22): 8480-8492. http://www.jneurosci.org/content/35/22/8480.full -- Matthias H Hennig http://homepages.inf.ed.ac.uk/mhennig/ -- Matthias H Hennig http://homepages.inf.ed.ac.uk/mhennig/ The University of Edinburgh is a charitable body, registered in Scotland, with registration number SC005336.

Dec. 10, 2015

PhD student position in Computational Vision - Video Analysis at KTH in Stockholm

by Tony Lindeberg

PhD student position in Computational Vision - Video Analysis at KTH in Stockholm Job description The position is in the area of Computational Vision — the science of understanding the computational mechanisms underlying visual perception and of equipping computers with visual perceptual abilities to make them see. The goal of this specific project is to develop new approaches for computing image features in terms of receptive fields for analyzing spatio-temporal image data (video or real-time image streams) in a theoretically well-founded manner for purposes in computer vision and computational modelling of biological vision. The main focus is specifically on developing computational vision methods for video analysis that are based on image operations in terms of time-causal and time-recursive spatio-temporal receptive fields, which only make use of information from the present moment and a compact buffer of what has occurred in the past, for which we have recently developed a novel theoretical scale-space framework at KTH. The main work to be done concerns: (i) extending this framework to different types of spatio-temporal feature detection tasks, (ii) integrating the framework into higher-order visual tasks and (iii) evaluating the performance on benchmark problems as a guide to further developments. There are possibilities of working theoretically (mathematically), algorithmically and experimentally in close collaboration with the supervisor. An overview of the research environment can be found at https://www.kth.se/profile/76171/page/computational-vision-at-csc-kth. Qualifications The candidate should have a strong computationally oriented background. The preference is for a candidate with a Master's degree in Engineering Physics or Computer Science with focus towards applied mathematics, computer science and numerical computations or a MSc/MEng education leading to similar skills. Good knowledge about computer vision and machine learning is a strong merit. The candidate should have good analytical abilities to work individually on problem solving and in good collaboration with the supervisor, specifically of working systematically and with good communication skills being able to present the results in writing and at scientific meetings. Good programming skills are necessary with the ability of working both with algorithm development in Matlab and if necessary complementing by more efficient implementations in C or C++. Applicants must be strongly motivated for doctoral studies, possess the ability to work independently and perform critical analysis and also possess good levels of cooperative and communicative abilities. Department information The position belongs to the Computational Brain Science group in the recently merged departments of Computational Biology and High Performance Computing and Visualization at the School of Computer Science and Communication. For more information visit https://www.kth.se/en/csc/forskning/cb. Additional information For further information and details about how to apply, please see https://www.kth.se/en/om/work-at-kth/lediga-jobb/what:job/jobID:82576/ The deadline for applications is on January 17, 2016. [cid:FD2B374F-C472-4895-ADA7-B3CD5419FD22@csc.kth.se] Tony Lindeberg Professor of Computer Science — Computational Vision KTH Royal Institute of Technology School of Computer Science and Communication Department of Computational Biology SE-100 44 Stockholm, Sweden Phone: +46 8 790 6205 http://www.csc.kth.se/~tony

Dec. 10, 2015

ACAN 2016 - Call for Applications

by Geoff Goodhill

Graduate students and postdoctoral fellows interested in using electrophysiological and optical techniques in their research are encouraged to apply for the Australian Course in Advanced Neuroscience (ACAN) 2016, which will be held from 10th to 30th of April 2016 at the Moreton Bay Research Station, North Stradbroke Island, Queensland, Australia. ACAN is an intensive three-week course that guides participants through the theory and practice of electrophysiological recording and optical imaging techniques using a unique balance of small group lectures and hands-on laboratory work. Lectures from leading faculty will outline in an informal atmosphere the theoretical basis of cellular and systems neuroscience, and the principles of electrophysiological and optical recording techniques. During the course each participant will become proficient in patch-clamp recording, both in vitro and in vivo, calcium imaging, optogenetics, and many other techniques through unbridled access to state-of-the-art equipment, guided by the faculty. The course is also a lot of fun, with many ACAN students developing close friendships and collaborations during and after the course. In 2016 ACAN faculty will include: Cliff Abraham Ehsan Arabzadeh George Augustine Brad Baker John Bekkers Yossi Buskila Vincent Daria Alan Finkel Andreas Frick Yukiko Goda Geoff Goodhill Brett Graham Maarten Kole Matthew Larkum Joe Lynch Peregrine Osborne Lucy Palmer Steve Petrou Chris Reid Mala Shah Stephen Williams Twelve students will be selected to attend ACAN 2016. The application deadline is Monday 11th Jan 2016. For full details about the course, including the program, please visit: http://acan.qbi.uq.edu.au <http://acan.qbi.uq.edu.au/> In order to apply for ACAN 2016, you must: be a currently-enrolled PhD student, a postdoctoral fellow, or junior faculty (preferably with no more than 5 years after completing your PhD). Preference will be given, but is not exclusive, to those who are full-time residents of Australia or NZ (but you do not need to be a citizen or permanent resident of those countries). In your application you should include: - a completed application form (obtained from http://acan.qbi.uq.edu.au <http://acan.qbi.uq.edu.au/>) - your CV. - a covering letter that clearly states how you will apply the skills taught at ACAN to your research. - a reference from your supervisor, including a confirmation that funds are available to allow you to attend the course. - The fee for ACAN 2016 is A$4500, which covers all meals, accommodation, laboratory supplies and teaching materials. Scholarships from the Neurological Foundation of New Zealand are available for NZ citizens/permanent residents. Please send applications to: Prof Stephen Williams Queensland Brain Institute Email: srw(a)uq.edu.au <mailto:srw@uq.edu.au> http://www.qbi.uq.edu.au/group-leader-williams <http://www.qbi.uq.edu.au/group-leader-williams>

Dec. 10, 2015

IWSP7/ME@MBC talks now online

by Levin Kuhlmann

A selection of the talks from "IWSP7: Epilepsy Mechanisms, Models, Prediction & Control" and the overlapping "Melbourne Epilepsy" (ME@MBC) meeting held at the University of Melbourne, Australia, during 3-7 August 2015 are now online on the IWSP7 YouTube Channel at the following link: https://www.youtube.com/channel/UCy_d33ZB6xL7Cx8-eN7Fwxg/playlists Re-live the action, or share it with your friends or colleagues. On behalf of the local organizing committee Levin Kuhlmann, PhD David B. Grayden, PhD Mark J. Cook, MD Anthony N. Burkitt, PhD Dean R. Freestone, PhD Tatiana Kameneva, PhD Alan Lai, PhD Elma O'Sullivan-Greene, PhD Andre Peterson, PhD Email: organizingcommittee(a)iwsp7.org<mailto:organizingcommittee@iwsp7.org>

Dec. 10, 2015

post-doc position at the center for sleep and consciousness in the integrated information theory (IIT) group (Prof. Giulio Tononi)

by Larissa Albantakis

*Post-doc position(s) at the Center for Sleep and Consciousness * Prof. Giulio Tononi, University of Wisconsin, Madison Several postdoctoral positions are available at the center for sleep and consciousness science in the laboratory of Prof. Giulio Tononi (University of Wisconsin, Madison, http://integratedinformationtheory.org/) to study information and causation within the framework of the integrated information theory. Immediate funding is available for a range of projects on foundational questions regarding information, causation, emergence, adaptation, evolution and complexity, especially in the context of neural networks. Candidates are expected to have strong training in an analytically rigorous discipline such as theoretical biology/neuroscience, physics, mathematics, computer science, or engineering. We explicitly encourage mathematicians to apply. Experience in information theory, complex systems, and an interest in the philosophy of causation are a plus. Programming experience is required (knowledge of MATLAB, Python, and/or C++ is of advantage). Appointments are renewable from year to year for up to 3 years, starting as soon as possible or until the positions are filled. Post-doc salaries correspond to the National Institutes of Health National Research Service Award (NRSA) stipend schedule for postdoc trainees, based on number of years of postdoctoral experience. Candidates should send a CV, brief statement of previous research and future research interests, and email addresses and phone numbers of three references to: Giulio Tononi, gtononi(a)wisc.edu. For more information contact Larissa Albantakis (albantakis(a)wisc.edu) or William Marshall (wmarshall3(a)wisc.edu) Albantakis L, Hintze A, Koch C, Adami C, Tononi G (2014) Evoluation of Integrated Causal Structures in Animats Exposed to Environments of Increasing Complexity. PLoS Comput Biol 10(12):e1003966 Oizumi M, Albantakis L, Tononi G (2014) From the Phenomenology to the Mechanisms of Consciousness: Integrated Information Theory 3.0. PLoS Comput Biol 10(5):e1003588 Hoel EP, Albantakis L, Tononi G (2013) Quantifying causal emergence shows that macro can beat micro. PNAS, 110(49), 19790–19795. Albantakis L, Tononi G (2015) The Intrinsic Cause-Effect Power of Discrete Dynamical Systems—From Elementary Cellular Automata to Adapting Animats. Entropy 17.8 (2015): 5472-5502. -- Larissa Albantakis, PhD Department of Psychiatry University of Wisconsin 6001 Research Park Blvd Madison, WI 53719

Dec. 9, 2015

Announcement: Groningen Spring School on Cognitive Modeling

by Jelmer Borst

Groningen Spring School on Cognitive Modeling – ACT-R, Nengo, PRIMs, & Accumulator Models – Date: April 4-8, 2016 Location: Groningen, the Netherlands Fee: € 200 (late fee €50 after January 31) Registration: www.ai.rug.nl/springschool <http://www.ai.rug.nl/springschool> The Groningen Spring School on Cognitive Modeling will cover four different modeling paradigms: ACT-R, Nengo, PRIMs, and Accumulator models. It thereby offers a unique opportunity to learn the relative strengths and weaknesses of these approaches. Each day will consist of four theory lectures, one on each paradigm. Each modeling paradigm also includes hands-on assignments. Although students are free to chose the number of lectures they attend, we recommend students to sign up for lectures on two of the modeling paradigms, and complete the tutorial units for one of the paradigms. At the end of each day there will be a plenary research talk, to show how these different approaches to modeling are applied. Admission is limited, so register soon! ACT-R Teachers: Jelmer Borst, Hedderik van Rijn, Niels Taatgen (University of Groningen) Website: http://act-r.psy.cmu.edu <http://act-r.psy.cmu.edu/>. ACT-R is a high-level cognitive theory and simulation system for developing cognitive models for tasks that vary from simple reaction time experiments to driving a car, learning algebra, and air traffic control. ACT-R can be used to develop process models of a task at a symbolic level. Participants will follow a compressed five-day version of the traditional summer school curriculum. We will also cover the connection between ACT-R and fMRI, and the timing extension to ACT-R. Nengo Teacher: Terry Stewart (University of Waterloo) Website: http://www.nengo.ca <http://www.nengo.ca/> Nengo is a toolkit for converting high-level cognitive theories into low-level spiking neuron implementations. In this way, aspects of model performance such as response accuracy and reaction times emerge as a consequence of neural parameters such as the neurotransmitter time constants. It has been used to model adaptive motor control, visual attention, serial list memory, reinforcement learning, Tower of Hanoi, and fluid intelligence. Participants will learn to construct these kinds of models, starting with generic tasks like representing values and positions, and ending with full production-like systems. There will also be special emphasis on extracting various forms of data out of a model, such that it can be compared to experimental data. PRIMs Teacher: Niels Taatgen (University of Groningen) Website: http://www.ai.rug.nl/~niels/actransfer.html <http://www.ai.rug.nl/~niels/actransfer.html> How do people handle and prioritize multiple tasks? How can we learn something in the context of one task, and partially benefit from it in another task? The goal of PRIMs is to cross the artificial boundary that most cognitive architectures have imposed on themselves by studying single tasks. It has mechanisms to model transfer of cognitive skills, and the competition between multiple goals. In the tutorial we will look at how PRIMs can model phenomena of cognitive transfer and cognitive training, and how multiple goals compete for priority in models of distraction. Accumulator Models Teacher: Marieke van Vugt (University of Groningen) Decisions can be described in terms of a process of evidence accumulation, modeled with a drift diffusion mechanism. The advantage of redescribing the behavioral data with an accumulator model is that those can be decomposed into more easily-interpretable cognitive mechanisms such as speed-accuracy trade-off or quality of attention. In this course, you will learn about the basic mechanisms of drift diffusion models and apply it to your own dataset (if you bring one). You will also see some applications of accumulator models in the context of neuroscience and individual differences.

Dec. 9, 2015

PhD studentship in visual decision making

by Ronald van den Berg

Applications are invited for a 4-year PhD student position on visual decision making at the department of Psychology at Uppsala University. The project investigates how humans make decisions under multiple simultaneous sources of uncertainty, by means of computational and psychophysical methods. Applicants should have a master’s degree in psychology or a related field. Experience with statistical models and computer programming is highly desirable but not necessary. More information about the position and the application procedure can be found at http://www.uu.se/en/about-uu/join-us/details/?positionId=82654. The deadline for application is 4 January 2016. Informal inquiries are welcome at ronald.vandenberg(a)psyk.uu.se.

Dec. 9, 2015

Postdoctoral position in Computational Neuroscience at the Italian Institute of Technology to study origin and function of slow cortical oscillations

by Stefano Panzeri

*Postdoctoral position in Computational Neuroscience at the Italian Institute of Technology to study origin and function of slow cortical oscillations* We are soliciting applications a new postdoctoral position in computational neuroscience in the newly established and highly interdisciplinary Neural Coding Laboratory at the IIT. This laboratory, jointly supervised by Stefano Panzeri and Tommaso Fellin, aims at combining experiments and mathematics to crack the neural code. The successful candidate will develop and use tools for the analysis of joint recordings of field potentials and single-neuron activity from genetically identified cell types in the cortex to understand the causal contribution of specific cellular subpopulations to the generation of slow oscillations. The project will also require the development of computational models that may explain the contribution of specific cell types to slow oscillations. The laboratory offers a range of strongly interdisciplinary and highly complementary expertise including computational neuroscience, electrophysiology and optogenetics. The successful candidate will have the opportunity to analyze experimental data and to suggest causal manipulations based on the predictions that arise from the theoretical work. The applicants should have a strong background in numerate sciences, be highly independent and have a strong propensity for interdisciplinary research. Experience in or understanding of experimental neuroscience is desirable, but not necessary. Candidates must hold a PhD in computational neuroscience, (bio)-physics, (bio)-engineering or a related discipline and be highly motivated and creative individuals who want to work in a dynamic, multi-disciplinary research environment and who are willing to interact with both experimental and theoretical neuroscientists. For reference to recent work of the PIs please see Zuo et al. Cur. Biol. 2015; Panzeri et al. Trends Cogn. Neurosci. 2015; Bovetti and Fellin, J. Neurosci. Methods 2015; Einevoll et al. Nat. Rev. Neurosci. 2013; Beltramo et al., Nat. Neurosci. 2013. Applications (full CV, two recommendation letters and statement of research interest) should be sent by email to Dr. Stefano Panzeri ( stefano.panzeri(a)iit.it <https://mail.iit.it/owa/redir.aspx?C=oajclq8rPE6FcMCJ-lI1Hsu55NFH69II9YBluB…>) and Dr. Tommaso Fellin (tommaso.fellin(a)iit.it <https://mail.iit.it/owa/redir.aspx?C=oajclq8rPE6FcMCJ-lI1Hsu55NFH69II9YBluB…> ).

Dec. 9, 2015

fully funded 4-year phd studentship - functional network analysis of EEG (application deadline next monday - 14th December!

by Allan, Dr Kevin

A fully-funded 4-year phd studentship (start date: October 2016) is available at the University of Aberdeen, Scotland, to work in the School of Psychology EEG Laboratory with Dr Kevin Allan and Professor Bjoern Schelter. Please note the tight deadline for applications: Monday, 14th December! The position is open to UK/EU nationals only. More details below (or see http://www.abdn.ac.uk/clsm/graduate/research/psychological-states-1135.php) If you are interested, and want to find out more, please get in touch with me (Kevin Allan, k.allan(a)abdn.ac.uk) Title: Investigating functional brain networks and psychological states in real-time We are looking for a highly numerate individual, ideally one experienced with EEGlab, matlab, mathematica or R, to help us implement a novel EEG network analysis tool, and then test it in a series of studies examining encoding and retrieval networks involved in episodic memory. The project is a cross-disciplinary collaboration between Dr Allan, a cognitive neuroscientist based in the Aberdeen School of Psychology, and Prof. Schelter, a physicist based in the Aberdeen Institute for Complex Systems and Mathematical Biology. The project also has the backing of an industrial partner, Tau-Rx, a University of Aberdeen spinout company working on pharmacological treatments for dementia, and the student will be offered a substantial placement with Tau-Rx during their PhD where the opportunity will be given to apply skills learned to estimate functional network structure in patients and healthy controls from clinical EEG data. A key element of the project is to optimise and implement a new, highly efficient network analysis tool to perform Granger causality analysis upon data as it is being collected, and to display the outputs of the model within a bespoke visualisation tool. This will require training in the matlab and mathematica software packages, EEG data collection hardware and software, as well as the mathematical basis of the analysis, all of which will be provided by Dr Allan, Prof. Schelter and their post-docs. The EEG Lab in the School of Psychology contains all the necessary EEG recording hardware, software and expertise to support the project. In years 2 - 4 the student will receive further scientific and business-related training during a placement with the industrial partner, Tau-Rx. During their placement the student will be given the opportunity to work with a team of researchers involved in the analysis of EEG data from clinical trials of drug therapies for Alzheimer's and fronto-temporal dementia. The University of Aberdeen is a charity registered in Scotland, No SC013683. Tha Oilthigh Obar Dheathain na charthannas clàraichte ann an Alba, Àir. SC013683.

Dec. 8, 2015

PhD position in computational neuroscience available for project "Learning to hear with plasticity across multiple timescales" at Imperial College London

by Dan Goodman

A PhD position is available as part of the Neurotechnology centre for doctoral training at Imperial College London, jointly supervised by Dan Goodman, Paul Chadderton, Claudia Clopath and in collaboration with Agnes Leger: - http://neural-reckoning.org/ - http://www.bg.ic.ac.uk/research/p.chadderton/ChaddertonLab/Home.html - http://www.bg.ic.ac.uk/research/c.clopath/ - http://www.psych-sci.manchester.ac.uk/staff/Agnes.Leger The title of the project is "Learning to hear with plasticity across multiple timescales", and it aims at understanding how the brain adapts and learns to cope with difficult listening situations (e.g. a crowded pub or restaurant), and applying this to developing new technology (e.g. for speech recognition). It will involve (1) developing mathematical and computational models of hearing and neural adaptation and plasticity, (2) experimental testing (including animal electrophysiology and human psychoacoustics), and (3) technology development for speech recognition, hearing aids and cochlear implants. The candidate should be willing to learn experimental techniques (animal electrophysiology and/or human psychophysics), but is not required to have any previous experience. The PhD programme is fully funded for four years, of which the first year is a taught MRes course. In addition to working within the centre, studying at Imperial College provides excellent opportunities for interacting with other theoretical and experimental researchers, both at Imperial (recently ranked 8th in the world in the QS world university rankings) and in the many neuroscience groups in London. Note that unfortunately funding for non-UK/EU residents is quite limited and there will therefore be stronger competition for these places. For more details on this project, the centre, and how to apply: http://www.imperial.ac.uk/neurotechnology/cdt/projects/hear_with_plasticity/ Dan Goodman

Dec. 8, 2015

IBM Journal of R&D, Special Issue on "Computational Neuroscience"

by James R Kozloski

Call for Papers IBM Journal of Research and Development Special Issue on "Computational Neuroscience" Overview Understanding the brain's dynamics is of central importance to neuroscience. Our ability to observe, model, and infer from neuroscientific data the principles and mechanisms of brain dynamics will determine our ability to understand the brain's unusual cognitive and behavioral capabilities. In the nearer term, analysis and prediction of changes to these dynamics, observed in vast new datasets and rendered in large scale simulations, are beginning to facilitate applications in important societal areas such as education, aging, assistive technology, and the treatment of disease. The explosion in new data about brain and neural tissue dynamics and development leads us to propose this special issue of the IBM Journal of Research and Development, which will emphasize new solutions, models, capabilities, and other technologies that advance the analysis of neuroscientific data and the application of predictive models to anticipate changes in brain function, cognition, and behavior. We solicit Abstracts (paper proposals) in the following areas: Potential Focus Areas for Papers Applications of machine learning algorithms to prediction in neuroscience Analysis of behavioral dynamics Analysis of brain and neural circuit image and time-series data Analysis of physiological data Models and computational simulations of brain and neural circuit dynamics Applications of models for better understanding of mental health, real-world behaviors, and perceptual and cognitive states The development of assistive technologies based on cognitive or brain-inspired models IBM Journal Manuscript Preparation Guidelines The Journal is peer reviewed -- all papers will be sent to several experts to be reviewed before a final publication decision is made. All papers must place the described research and results in perspective by carefully citing relevant related scientific work. Contact Cliff Pickover (cliffp(a)us.ibm.com ), or visit the journal web site, for the manuscript preparation template: http://www.research.ibm.com/journal/rdauth.html Contact Information Guest editors for the issue are James Kozloski and Guillermo Cecchi. Authors should indicate their interest in submitting a paper by sending a preliminary abstract to journal Editor-in-Chief Cliff Pickover ( cliffp(a)us.ibm.com) copying co-guest editor James Kozloski ( kozloski(a)us.ibm.com) -- by January 15, 2016. You must submit an abstract to be considered for this issue, and we will notify you when your abstract is accepted. Important Deadlines and Schedule - January 15, 2016: Preliminary Abstracts Due (tentative article title, author names/affiliations, 1 paragraph description) - May 15, 2016: Final Paper Draft Due (if your abstract is accepted) - March, 2017: Special Issue Published (every paper will be on-line by this date) ____________________________________________ James Kozloski Research Staff Member Master Inventor T.J. Watson Research Center 1101 Kitchawan Rd., 13-132E Yorktown Heights, NY 10598 Tel +1 914 945 3982 Mobile +1 203 231 6187 ibm.co/kozloski

Dec. 8, 2015

IBM Research, Postdoctoral Entry Research Position

by James R Kozloski

IBM Research is undertaking a project to characterize and implement models of the cortico-striato-thalamo-cortical system. This work will develop and implement models of systems in the normal and diseased brain, including portions of cerebral cortex, thalamus, basal ganglia, and dopaminergic nuclei, as point neuron network and then neural tissue simulations. The models will serve as a test bed for simulation studies in subsequent projects. Using these models, candidate system-level failure modes consistent with disease states will be identified and analyzed. Simulations will provide a tool for quantifying brain system homeostasis, evaluating risk, and developing potential strategies to mitigate the effects of disease. Categorization of simulated brain states and of key measurements from these states will be directed towards helping test several core hypotheses along with experimental collaborators. IBM is seeking a Post Doctoral Researcher with a degree in bioengineering, neuroscience, computer science, mathematics, physics or similar field. Candidates should have a proven neuroscience background, experience analyzing neural systems data, and the modeling and simulation of neural circuits, including neuroplasticity and conductance-based models. Preferred Candidates will have: Experience in computational neuroscience or data analytics Experience in neuroscience Basic knowledge in models of Neural Plasticity and Calcium Dynamics Experience in programming (C++, Matlab, Python) Please apply at the following IBM Careers - Job details link: https://krb-sjobs.brassring.com/tgwebhost/jobdetails.aspx?jobId=23341&Partn…

Dec. 7, 2015