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DENDRITES 2022 call for abstracts

by Yiota Poirazi

DENDRITES 2022 EMBO Workshop on Dendritic Anatomy, Molecules and Function Heraklion, Crete, Greece 23-26 May 2022 http://meetings.embo.org/event/20-dendrites Dear Colleagues, We are pleased to announce the solicitation of abstracts for short oral or poster presentations at the EMBO Workshop on DENDRITES 2022, which will take place in Heraklion, Crete on 23-26 May 2022. This is the 4th of a very successful series of meetings on the island of Crete that is dedicated to dendrites. The meeting will bring together scientific leaders from around the globe to present their theoretical and experimental work on dendrites. The meeting program is designed to facilitate discussions of new ideas and discoveries, in a relaxed atmosphere that emphasizes interaction. Please register (no payment required) and submit your abstract online at: http://meetings.embo.org/event/20-dendrites Submissions of abstracts are due by *February 1st, **2022* Notifications will be provided by February 28th, 2022 Registration payment due by April 15th, 2022 Potential attendees are strongly encouraged to submit an abstract as presenters will have registration priority. For more information about the conference, please refer to our web site or send email to info(a)mitos.com.gr We look forward to seeing you in person at DENDRITES 2022! The organizers, Yiota Poirazi, Kristen Harris, Matthew Larkum, Michael Häusser -- Panayiota Poirazi, Ph.D. Research Director Institute of Molecular Biology and Biotechnology (IMBB) Foundation of Research and Technology-Hellas (FORTH) Vassilika Vouton, P.O.Box 1385, GR 70013, Heraklion, Crete GREECE Tel: +30 2810-391139 /-391238 Fax: +30 2810-391101 Εmail: poirazi(a)imbb.forth.gr Lab site: www.dendrites.gr

Dec. 13, 2021

Faculty Position in Computational Neuroscience at Ecole Polytechnique Federale de Lausanne (EPFL)

by Mathis Alexander

Joint Faculty Position in Computer & Communication Sciences and Life Sciences The Schools of Computer and Communication Sciences (IC) and Life Sciences (SV) at EPFL invite applications for a faculty position at the intersection of life and computational sciences. We seek candidates who investigate biological systems as inspiration for new computational approaches. The appointment could be either at the assistant professor or tenured levels. The search is broad and all research areas at the intersection of life science and computer science will be considered. Research topics could be, but are not limited to, brain-inspired machine learning, artificial and biological intelligence, computational neuroscience, bio-inspired AI, bio-inspired low-energy computing, or DNA computing, … Further questions can be addressed to: George Candea and Wulfram Gerstner Chairs of the Faculty Recruiting Committee recruiting.icsv(a)epfl.ch<mailto:recruiting.icsv@epfl.ch> To apply: https://www.epfl.ch/about/working/joint-faculty-position-in-computer-commun… Best wishes, Alexander Mathis [cid:clip_image001.png] Alexander Mathis Tenure Track Assistant Professor people/alexander.mathis mathislab.org<http://mathislab.org>

Dec. 11, 2021

Faculty Positions at EPFL

by Petersen Carl

Dear Computational Neuroscientists, I would like to encourage you to apply for the open faculty positions at EPFL: https://www.epfl.ch/about/working/faculty-positions-in-neuroscience/ https://www.epfl.ch/about/working/joint-faculty-position-in-computer-commun… Best wishes, Carl. - Prof. Carl Petersen Director, Brain Mind Institute Director, Laboratory of Sensory Processing Faculty of Life Sciences Ecole Polytechnique Federale de Lausanne (EPFL) CH-1015 Lausanne, Switzerland carl.petersen(a)epfl.ch<mailto:carl.petersen@epfl.ch> https://www.epfl.ch/schools/sv/bmi/ https://www.epfl.ch/labs/lsens/

Dec. 8, 2021

AREADNE 2022 Call for Abstracts

by John Pezaris

AREADNE 2022 Research in Encoding and Decoding of Neural Ensembles Nomikos Conference Centre, Santorini, Greece 28 June - 2 July 2022 http://areadne.org info(a)areadne.org Dear Colleague, We are pleased to announce solicitation of abstracts for poster presentation at AREADNE 2022, 28 June - 2 July 2022, our ninth meeting to be held at the Nomikos Conference Centre in Santorini, Greece. Continuing with the same highly successful format, AREADNE 2022 will bring scientific leaders from around the world to present their theoretical and experimental work on the functioning of neuronal ensembles. The meeting will provide an informal yet spectacular setting in which attendees can discuss their recent ideas and discoveries, with a relaxed pace that emphasizes interaction. Please see the Call for Abstracts for additional details, including links for templates, at http://areadne.org/call-for-abstracts Submissions of abstracts for poster presentations are due by 21 January 2022; notifications will be provided by 22 February 2022. We strongly encourage potential attendees to submit an abstract as presenters have registration priority. For information about the conference, please refer to the main web page http://areadne.org or send email to us at info(a)areadne.org. We hope to see you at AREADNE 2022! Nicholas Hatsopoulos and John Pezaris, Co-Chairs AREADNE 2022 --- John S. Pezaris, Ph.D. AREADNE 2022 Co-Chair Harvard Medical School Massachusetts General Hospital 55 Fruit Street Boston, MA 02114, USA john(a)areadne.org

Dec. 7, 2021

Info Day - International Master & PhD in Computational Neuroscience @ BCCN Berlin - 26.01.22

by Graduate Programs

Dear Computational Neuroscientists, Please share the following event information with anyone who may be interested. We at the Bernstein Center for Computational Neuroscience (BCCN) Berlin will hold a hybrid "Info Day" to discuss our International Master & Doctoral Programs in Computational Neuroscience on Wednesday, January 26th, at 3pm (CET). The event will consist of talks by: * Prof. Dr. Klaus Obermayer (head of the programs) * Lisa Velenosi (teaching coordinator) * Current master and doctoral students Attendees will also have the opportunity to meet & discuss with current students and ask any questions or concerns that they may have. See our website <https://www.bccn-berlin.de/events-list/information-day-2022-international-g…> for a more detailed schedule and registration link. Best regards and I hope that everyone is staying healthy, Lisa Velenosi -- Lisa Velenosi Teaching Coordinator Bernstein Center for Computational Neuroscience Humboldt-Universität zu Berlin Philippstraße 13, Haus 6; 10115 Berlin; Germany Tel: +49 (0)30 2093 6773 Technische Universität Berlin Marchstraße 23; Raum 5.061; 10587 Berlin; Germany Tel: +49 (0)30 314 72006 SFB1315 - Network Outreach Coordinator PhD & Postdoc Cohort

Dec. 7, 2021

3rd BCI-UC: Voting open until Sunday

by Anja Meunier

Dear colleagues, the voting period for the 3rd BCI Un-Conference is now open! Find the registration and voting portal here [1] [1]. We have received many excellent submissions, now it is your turn to vote for those that you would like to hear about during BCI-UC on January 27th, 2022. The voting portal will be open until Sunday, December 12th, 2021, 11:59 pm (CET). We will invite the authors of the top-voted abstracts to present at the un-conference. In addition, the 3rd BCI-UC will feature keynotes by Cynthia Chestek (University of Michigan) [2] and Thorsten Zander (TU Brandenburg) [3]. BCI-UC is an online un-conference that provides rapid dissemination of novel research results in the BCI community. Participants can submit abstracts to apply for 20 minutes presentation slots. Abstracts are not reviewed by a program committee. Rather, all registered participants can vote on which of the submitted abstracts they would like to see presented at the un-conference. Because the BCI-UC does not publish conference proceedings, submitted abstracts can report novel as well as already published work. Registration and attendance are free of charge. Presentations of the 1st and 2nd BCI-UC can be re-watched [4]. Join us in setting the BCIUC agenda! The BCI-UC committee: Moritz Grosse-Wentrup Anja Meunier Philipp Raggam Jiachen Xu Links: [1] https://bciunconference.univie.ac.at/register-vote/ [2] https://scholar.google.com/citations?user=36sxAZEAAAAJ&hl=de [3] https://scholar.google.com/citations?hl=en&user=0E49HxYAAAAJ [4] https://bciunconference.univie.ac.at/past-events/ Links: ------ [1] https://bciunconference.univie.ac.at/register-vote/

Dec. 6, 2021

Announcement of Reopened Research Topic — Frontiers in Computational Neuroscience

by James R Kozloski

In collaboration with Frontiers in Computational Neuroscience, we are announcing the launch of the Research Topic: Cortico-striato-nigro-thalamo-cortical Modeling for Understanding Motor Function and Neurodegenerative Disease vol II Hosted by Pengsheng Zheng, James Kozloski, Timothy Rumbell, George V. Rebec. We would like to encourage you to contribute to this topic. Please find more information about Research Topics below, including the publishing fees that apply. You can also visit the homepage we have created on the Frontiers website, which defines the focus of the topic, and where all published articles will appear: https://www.frontiersin.org/research-topics/28267/cortico-striato-nigro-tha… Movement in the body is directly controlled by motor cortex, and also determined by multiple subcortical structures, such as thalamus and the basal ganglia (including striatum and dopamine neurons in the substantia nigra). Many lines of evidence have suggested the cortico-striato-nigro-thalamo-cortical circuitry plays a major role in motor learning and control. This circuitry has also been investigated for its causal role in the onset and progression of neurodegenerative diseases. Neurodegenerative diseases are often associated with movement disorders and neuronal dysfunction in degenerated brain structures, such as the striatum in Huntington’s disease and dopaminergic neurons in the substantia nigra pars compacta in Parkinson's disease. Degeneration fundamentally changes the dynamics of local neuronal circuits, and these changes then propagate through the structural connectome of whole brain circuitry, eventually altering global brain dynamics. However, our current understanding of these system dynamics in the cortico-striato-nigro-thalamo-cortical circuitry remains rudimentary. Hence, theoretical studies about critical system variables and computational principles of this circuitry, constrained by recordings throughout, will shed new light on causes of motor dysfunction and neurodegenerative diseases. This Research Topic of Frontiers in Computational Neuroscience aims to bring together recent advances in theoretical modeling of cortico-striato-nigro-thalamo-cortical network and experimental observations. Topics of interest include, but are not limited to, local brain circuit modeling, the functional role of neuronal plasticity in the local and global circuit, global circuit interactions and information exchange, new models validated by experimental observations, and dynamic disease risk analysis through perturbation studies. ____________________________________________________________ James Kozloski, PhD. Research Staff Member Manager, Multiscale Computational Modeling IBM Research, Healthcare and Life Sciences Research Member IBM Academy of Technology IBM Master Inventor IBM T.J. Watson Research Center P.O. Box 218 1101 Kitchawan Rd. Room 13-132E Yorktown Heights NY 10598 kozloski(a)us.ibm.com +1-914-945-3982 ibm.co/kozloski

Dec. 2, 2021

INCF endorses a new FAIR software best practice!

by INCF

*INCF endorses the Five Recommendations for FAIR Software as a Best Practice* The Five Recommendations for FAIR Software <https://fair-software.eu/> aim to encourage the greater adoption of FAIR principles by providing a set of starting recommendations that researchers can use to improve the quality, reach, and reproducibility of their software. The recommendations were created by The Netherlands eScience Center <https://www.esciencecenter.nl/> and DANS <https://dans.knaw.nl/en/>, the Dutch national centre of expertise and repository for research data. The Five Recommendations for FAIR Software were endorsed on November 30, 2021, after a public comment period and review by the INCF SBP committee. Find their use cases here <http://bit.ly/SBP5recommendations>. Learn more about the recommendations here <https://bit.ly/5recommendationsblog>. /The INCF Secretariat

Dec. 2, 2021

Video recording from Online Workshop "Towards multipurpose neural network models II: Model testing and model fitting"

by Zélie Tournoud

Dear colleagues, We are happy to inform you that the video recordings from the *Workshop on "Towards multipurpose neural network models II: Model testing and model fitting" *are now available to watch online: See the playlist here. <https://www.youtube.com/playlist?list=PLGAiaveljnk9yz_vMjlZckOMnObk1WtlJ> ** **It took placefrom 30 September to 01 October 2021 and has been organized by Anton Arkhipov (Allen Institute, Seattle), Gaute Einevoll (NMBU/University of Oslo), with the support of the European Institute for Theoretical Neuroscience. We hope the content for these videos will be of interest for you. Kind regards, *Zélie Tournoud*/ Communication manager at EITN/ *European Institute for Theoretical Neuroscience (EITN)* UMR 9197 – *NeuroPSI*(Institut des Neurosciences Paris-Saclay) CNRS – Université Paris-Saclay 151 route de la Rotonde Bâtiment 151 91400 Saclay https://www.eitn.org */Mailing address:/*/// UMR 9197 NeuroPSI BP 45 – 91940 Les Ulis Courtaboeuf/ **

Dec. 2, 2021

Doctoral position on foraging dynamics in natural environment.

by Ahmed El Hady

We are offering a PhD position at the International Max planck Research School for Quantitative Behavior, Ecology and Evolution from lab to field (IMPRS-QBEE) situated in the beautiful German town of Konstanz. It is a newly established highly interdisciplinary school that brings a full breadth of expertise from ecology to physics to computer science to neurobiology in order to understand animal behavior across the whole animal kingdom . For more information about the school, please check this website: https://www.ab.mpg.de/3228/imprs . The deadline for application is mid-january 2022: https://www.ab.mpg.de/406326/applications-2022 The PhD project I am offering is a joint project between my group and the group of Einat Couzin , both situated at the Center for advanced study of collective behavior and the Max Planck institute of Animal Behavior in Konstanz. Below are the details of the project ( https://www.ab.mpg.de/426580/Couzin-Fuch_El-Hady ): Foraging is a universal, evolutionary conserved, behavior as animals in nature forage in groups across large spaces looking for resources to satisfy their energetic needs. To date, laboratory experiments have been constrained to animals foraging in small spaces and in small groups. There is an increasing evidence that both neural and behavioral dynamics, however, are principally different in natural spatial scales. The project aims to investigate basic principles underlying foraging decisions in large-scale dynamic environments, that mimic natural habitats. We will focus on two very different model organisms, each exhibits different adaptations to foraging under conditions of considerable uncertainty: swarm-forming locusts and rats. The experiments will be performed at the imaging hangar in the visual computing of collective building at Konstanz University. The imaging hangar is the largest indoor animal imaging facility in the world, offering the opportunity to perform foraging experiments at an unprecedented scale. Using patch foraging as a quintessential behavioral paradigm, and a combination of high throughput continuous video tracking and quantitative modeling approaches, we aim to elucidate how foraging strategies are updated in a changing social and physical world. You will join our interdisciplinary team at the Max Planck Institute for Animal Behaviour (https://www.ab.mpg.de/) and the Excellence Cluster for the Advanced Study of Collective Behaviour (www.exc.uni-konstanz.de/collective-behaviour) The Max Planck Society and Konstanz University are equal opportunity employers that are committed to provide employment opportunities to all qualified applicants without regard to race, color, religion, age, nation, sexual orientation, gender identity, or disability. They seek to increase the number of women in those areas where they are underrepresented and therefore explicitly encourage women to apply. Requirements: • MSc in neuroscience, biology, physics and a clear interest in animal behaviour. • Quantitative skills. Proficiency in at least one programming language is required (C, Python or Matlab) • Good communication and writing skills. Supervisors: Ahmed El Hady ahady(a)ab.mpg.de Einat Couzin-Fuchs einat.couzin(a)uni-konstanz.de For more information , please do not hesitate to contact me.

Dec. 2, 2021