- Comp-neuro - lists.cnsorg.org

A revised electromagnetic theory of the brain

by Patirniche, Dinu

Dear Colleagues, A common dogma of neuroscience is that all electrical events occurring in the brain are well described by an electrostatic theory. However, adopting a geometric attitude it becomes immediately clear that the propagation of an action potential induced a non-conservative electric field within nearby spines, and thus an electromagnetic description of the function of a brain is unavoidable. I would like to present to you with a revised and simplified version of the theory I advanced last year, entitled "Dynamic Aspects of Finite Architectures". The current work can be accessed here: doi.org/10.13140/RG.2.2.20738.73925 . Best, Dinu Patirniche.

May 2, 2019

Deadline extended NeuroBridges 2019 School Announcement

by Ahmed El Hady

Note: deadline for application submission is extended to 10th May 2019. */NeuroBridges 2019 Summer school , Cluny, France/* */( September 8th - September 19th, 2019)/* I would like to bring to your attention the *NeuroBridges 2019 Computational Neuroscience School*. <http://decision-making-lab.com/NeuroBridges/neurobridges2019.html> NeuroBridges <https://www.facebook.com/NeuroBridges/>is a one-of-a-kind series of scientific meetings in brain research, which brings together Mediterranean and Middle Eastern scientists, in order to promote international scientific cooperation in system and computational neuroscience. A major goal of this school is to serve as a bridge between experimental and theoretical neuroscientists, addressing system-level questions. This year the school will primarily focus on the neural basis and computational principles underlying sensory- motor tasks, in which the agent chooses from a small number of actions based on sensory and operant cues. *The forthcoming NeuroBridges 2019* will be a ten-day summer school. Students will attend lectures delivered by a group of leading neuroscientists, experimentalists as well as theoreticians, which will address the fundamental questions in the field of decision making. In addition to the lectures, the students will work in groups on small research projects. The school is intended for graduate students and postdocs, primarily (but not only) from the Middle East and the Mediterranean region either working in their home countries or abroad. We will consider applicants with some background in related fields in neuroscience or cognitive psychology. Through the online application system, you will be asked to provide personal details, academic background, a motivation letter that should include a paragraph about your quantitative skills and a CV. In addition, we request two recommendation letters. The school will take place between *September 8 and September 19, 2019* in Le Centre de Conferences Internationales de Cluny (CCIC) <http://www.ccic.eu/index.html>. Cluny is a small medieval town in Burgundy, France, located about 400km southeast of Paris (accessible by fast train, TGV). All costs of registration and accommodation will be covered by the organizers. A limited number of travel grants will also be available. *NeuroBridges* is co-organized by Ahmed El Hady <http://scholar.princeton.edu/ahmedelhady/home> (Princeton Neuroscience Institute, USA), Yonatan Loewenstein <http://elsc.huji.ac.il/loewenstein/home>(Hebrew University of Jerusalem, Israel) and David Hansel <https://neurophys.biomedicale.parisdescartes.fr/members/david-hansel/> (CNRS, Paris, France). Review of applications will end in May 2019. *2019 Faculty:* Merav Ahissar (Hebrew U.) <https://elsc.huji.ac.il/index.php?q=ahissar/home> Athena Akrami (UCL) <https://elsc.huji.ac.il/index.php?q=ahissar/home> Rafal Bogacz (Oxford) <https://www.ndcn.ox.ac.uk/team/rafal-bogacz> Thomas Boraud (CNRS) <http://www.inb.u-bordeaux2.fr/dev/EN/researcher.php?researcher=Thomas+Borau…> Mathew Diamond (SISSA) <https://phdcns.sissa.it/faculty/mathew-diamond> Ido Erev (Technion) <https://web.iem.technion.ac.il/en/people/userprofile/erev.html> Mehdi Khamassi (CNRS) <https://www.researchgate.net/profile/Mehdi_Khamassi> Najib Majaj (NYU) <https://www.researchgate.net/profile/Najib_Majaj> The deadline for application is *May 10th. 2019 *and the following is the website including the link for the online application: http://decision-making-lab.com/NeuroBridges/neurobridges2019.html <http://decision-making-lab.com/NeuroBridges/neurobridges2018.html> <http://decision-making-lab.com/NeuroBridges/neurobridges2018.html> For more information, please contactneurobridges2019(a)gmail.com <mailto:neurobridges2018@gmail.com>.

May 1, 2019

postdoctoral position in computational neuroscience/mathematical biology

by Rubchinsky, Leonid L

NSF-supported postdoctoral position in mathematical biology/computational neuroscience in my group in the Department of Mathematical Sciences at Indiana University-Purdue University Indianapolis (IUPUI). This position involves research in the mechanisms and properties of intermittent synchronization in neural and other living systems including collaboration with experimentalists. The position offers excellent interdisciplinary training possibilities in computational neuroscience and mathematical biology. Applicants should have (or expected to get in a near future) Ph.D. in mathematics, physics, neuroscience, biomedical engineering, computer science, or another related field. Applicants should have strong quantitative skills, some experience in dynamical modeling and data analysis, and a strong interest in life sciences applications. Experience in nonlinear dynamics, computational neuroscience, and mathematical biology is a plus. Please apply via mathjobs.org at https://www.mathjobs.org/jobs/jobs/13879. Screening of applications will continue until position is filled. Please address informal inquires to Leonid Rubchinsky via e-mail: lrubchin(a)iupui.edu Leonid *********************** Leonid Rubchinsky, PhD Associate Professor Department of Mathematical Sciences, Indiana University - Purdue University, Indianapolis Stark Neurosciences Research Institute, Indiana University School of Medicine 402 N. Blackford St Indianapolis, IN 46202-3216 lrubchin(a)iupui.edu http://www.math.iupui.edu/~lrubchin 317-274-9745 317-274-3460 (fax) ***********************

May 1, 2019

CORRECTION: US Air Force Young Investigator Research Program (YIP)

by GREENWALD, HAL S DR-04 USAF AFMC AFOSR/RTA

Announcement corrected below to note that doctorates must have been received NO EARLIER than April 1, 2012 (i.e., within the past 6 years, 11 months). --- The Air Force's annual Young Investigator Research Program (YIP) is an excellent way for new principal investigators in the US to accelerate their careers in basic research with three years of funding at up to $150,000 per year. Each year, every AFOSR portfolio can nominate one YIP recipient. Especially since the Cognitive & Computational Neuroscience portfolio is new this year, I wanted to make the neuroscience community aware of this opportunity (and also of the new portfolio). Unlike most of AFOSR's research grants that are open to researchers worldwide, YIP awards are limited to US persons (citizens, nationals, or permanent residents) with full-time, permanent positions at US institutions (by Oct. 1, 2019) who received their doctorates NO EARLIER than April 1, 2012. The application deadline for Fiscal Year 2020 awards is June 3, 2019. Program Description: The Air Force YIP supports scientists and engineers who have received Ph.D. or equivalent degrees within the last seven years and show exceptional ability and promise for conducting basic research. The objectives of this program are: 1. to foster creative basic research in science and engineering; 2. enhance early career development of outstanding young investigators; 3. and increase opportunities for the young investigator to recognize the Air Force mission and related challenges in science and engineering. Eligibility: Individual awards are made to U.S. institutions of higher education, industrial laboratories, or non-profit research organizations where the principal investigator (PI) is employed on a full-time basis and holds a regular position. YIP PIs must be a U.S. citizen, national, or permanent resident. Researchers working at a Federally Funded Research and Development Center or DoD Laboratory are not eligible for this competition. Research proposals must address Research Interests of the Air Force Office of Scientific Research, FA9550-19-S-0003, found at https://www.grants.gov/web/grants/view-opportunity.html?oppId=314753. Most YIP awards are funded up to $150,000 per year for three years, for a total of $450,000. Exceptional proposals will be considered individually for higher funding levels and/or longer duration. For more information about this funding opportunity, please see https://www.grants.gov/web/grants/view-opportunity.html?oppId=313523. Questions about YIP may be sent to afosryip(a)us.af.mil <mailto:afosryip@us.af.mil> . Sincerely, Hal Greenwald Hal S. Greenwald, Ph.D. Program Officer, Cognitive & Computational Neuroscience Air Force Office of Scientific Research (AFOSR/RTA) 875 N. Randolph St. Arlington, VA 22203-1768 (703) 588-8441

May 1, 2019

Fully Funded PhD position: Machine learning for studying structural and functional connectivity of the brain, Trento (Italy)

by Emanuele Olivetti

Applications are invited for a fully-funded 4-years Ph.D. scholarship at the NeuroInformatics Laboratory (NILab), Italy. NILab is a joint collaboration between Fondazione Bruno Kessler ( https://www.fbk.eu/en/about-fbk/) and the Center of Mind and Brain Sciences (https://www.cimec.unitn.it/en/14/the-center) within the University of Trento, Italy. Title: Machine learning for studying structural and functional connectivity of the brain Topics: machine learning, brain connectivity, diffusion MRI, Magnetoencephalography (MEG), longitudinal studies and human cognition Description: Neuroimaging methods, like sMRI, dMRI, fMRI and MEG/EEG can be used to investigate the anatomical and functional connectivity of the brain. This project will enable the candidate to pursue research on machine learning methods for such neuroimaging data for brain connectivity, with applications to longitudinal studies and to human cognition. The ideal candidate should have a mixed background both in cognitive neuroscience and numerate disciplines, like computer science, engineering, physics or mathematics. This project is in collaboration with the Division of Neurosurgery, S. Chiara Hospital, Trento and with the MEG Lab of CIMeC/LNiF, University of Trento. Please contact in advance: Emanuele Olivetti, olivetti(a)fbk.eu Deadline: May 21, 2019 Online application details below. Corresponding research area in the online application: NEUROIMAGING METHODS AND ANALYSIS Topic-Specific Grant: "4. Machine learning for studying structural and functional connectivity of the brain." ---------------------------------------------------------- From: PhD CIMeC <phd.cimec(a)unitn.it> Subject: [CIMeC-FYI] Call for 17 funded PhD positions NOW OPEN @ CIMeC, UNITrento. Italy Dear CIMeC Supporters, We are pleased to announce the opening of our annual call for *17 PhD fellowships* for the international Doctorate in Cognitive and Brain Sciences (CIMeC), commencing November 2019 at the University of Trento, Italy. As you will see from the links below, the call is open to several fields of cognitive neuroscience research. Interested candidates should contact the Principle Investigators who proposed topics of interest to them. - *Admissions*: http://www.unitn.it/drcimec/admission - Proposed 2019 PhD research topics: http://www.unitn.it/drcimec/research-topics - PhD Application *summary*: *https://www.unitn.it/drcimec/116/admission-doctorate-cognitive-and-brain-sciences <https://www.unitn.it/drcimec/116/admission-doctorate-cognitive-and-brain-sc…>* - PhD *Application *link: https://webapps.unitn.it/Apply/en/MyUnitn/Home/669/dott/cbs35 - PhD Application *Deadline*:* Thursday May 21, 2019, at 4pm (Italian time)* - *CIMeC*: http://www.unitn.it/cimec This year’s research topics proposed by the Doctoral Program Committee for 5 UNITN grants are visible here: http://www.unitn.it/drcimec/research-topics, while the 12 topic-specific grants’ details can be found here: http://www.unitn.it/drcimec/topic-specific-grants *The CIMeC, it’s doctoral program and UNITN in numbers:* - UNITrento ranks among top Italian Universities https://www.unitn.it/en/ateneo/1636/rankings - *4-yr program* (Nov. 1, 2019- Oct. 31, 2023). - Why a 4-yr program <http://www.unitn.it/drcimec/node/117> - Courses are in English - 17 positions, 100% funded - Salary: starting at approximately €1.200/mo., net - Winners receive a €4887 tax-free research/mobility budget - Why choose UNITRENTO <http://www.unitn.it/en/ateneo/1629/why-choose-the-university-of-trento> Please feel free to browse the FAQ <http://www.unitn.it/drcimec/node/122> pages on our website for further information, or contact the Head of the Programme, Prof. Yuri Bozzi phd.cimec(a)unitn.it. Regards, Leah Mercanti -- Leah Mercanti CIMeC PhD Program Administrator -------------------------------------------------------- CIMeC - Center for Mind/Brain Sciences University of Trento Corso Bettini, 31 I-38068, Rovereto (TN) Tel: +39 0464 80 8617 Fax: +39 0461 28 8690 Skypename: lleahhatwork Email: phd.cimec(a)unitn.it http://www.unitn.it/drcimec/ -- -- Le informazioni contenute nella presente comunicazione sono di natura privata e come tali sono da considerarsi riservate ed indirizzate esclusivamente ai destinatari indicati e per le finalità strettamente legate al relativo contenuto. Se avete ricevuto questo messaggio per errore, vi preghiamo di eliminarlo e di inviare una comunicazione all’indirizzo e-mail del mittente. -- The information transmitted is intended only for the person or entity to which it is addressed and may contain confidential and/or privileged material. If you received this in error, please contact the sender and delete the material.

April 30, 2019

Call for SIG and WG meetings in Warsaw, before INCF's Neuroinformatics 2019. Deadline June 1.

by Malin Sandström

Dear all, INCF is calling for community proposals for Special Interest Group (SIG) and Working Group (WG) meetings to be held in Warsaw on 31 August 2019, the day before the INCF Assembly. The call is open both to new and existing INCF SIGs/WGs. *Deadline is June 1st.* INCF is working to make neuroscience more FAIR (Findable, Accessible, interoperable, Reusable), by promoting the creation and uptake of standards and best practices in neuroscience, as applied to tools and infrastructure, and by running a community endorsement process for new and existing standards and best practices. SIGs have an important role in this process, as community-initiated groups where users and developers can meet to align interests, set up working groups and work collaboratively to develop, refine, and implement new community standards and best practices to be proposed for endorsement. The SIGs also serve as the focus for getting agreement and community buy-in on the use of these standards and best practices. SIG meetings in Warsaw should aim to: - investigate the possibility to establish new SIGs (possible activities include: survey for possible members and group activities, draft a plan of activities from community input) - update community members on SIG activities and progress since last year (existing SIGs), invite community input - form Working Groups (possible activities include: general meeting, set deliverables (develop new or extend existing standards and best practices), work on an application for INCF Working Group funding WG meetings in Warsaw should aim to: - update community members on SIG activities and progress since last year (existing WGs), - invite community input, - solicit new members INCF will support both SIGs and Working Groups with meeting logistics at INCF-associated meetings during the upcoming year, as well as offer funding for Working Group activities. Please submit your proposals for SIG and WG meeting themes no later than *June 1st*. Note that the submitter is assumed to also be the meeting leader, unless otherwise stated. Any questions can be directed to Malin Sandström, malin(a)incf.org Call page: https://www.incf.org/activities/standards-and-best-practices/incf-special-i… INCF SIG pages: https://www.incf.org/activities/standards-and-best-practices/incf-special-i… Best regards, Malin -- Malin Sandström, PhD Community Engagement Officer malin.sandstrom(a)incf.org International Neuroinformatics Coordinating Facility Karolinska Institutet Nobels väg 15 A SE-171 77 Stockholm Sweden http://www.incf.org

April 30, 2019

Web Site Moved

by Jim Perlewitz

”Computational Neuroscience on the Web” has moved. Please update bookmarks / links. It can now be found here: https://compneuroweb.com <https://compneuroweb.com/> For 20 years, the site has been providing links to CNS researchers, modeling and analysis software, web accessible data and models, mailing lists, conferences, workshops, courses and more, Do give it a look. Please send suggestions. Best regards, Jim

April 30, 2019

Abstract deadline soon (May 10th) for the UK Neural Computation 2019 meeting

by Mark Humphries

A reminder that the abstract submission deadline for the UK Neural Computation 2019 meeting is May 10th. There will not be any extension! Abstract submission is here: https://drmdhumphries.wixsite.com/ukneuralcomp2019/abstracts Decisions due: May 24th For full programme details and registration, please see the website: https://drmdhumphries.wixsite.com/ukneuralcomp2019 Registration closes June 21st 2019 Confirmed speakers: Athena Akrami / Andy Barron / Tim Behrens / Claudia Clopath / Matthias Hennig / Simon Laughlin / Rosalyn Moran / Cian O'Donnell / Chris Summerfield / Tim Vogels / Barbara Webb Kind regards Mark Humphries (Chair) Hannes Saal, Robert Schmidt, and Stuart Wilson (Organising committee) This message and any attachment are intended solely for the addressee and may contain confidential information. If you have received this message in error, please contact the sender and delete the email and attachment. Any views or opinions expressed by the author of this email do not necessarily reflect the views of the University of Nottingham. Email communications with the University of Nottingham may be monitored where permitted by law.

April 29, 2019

Workshop in Copenhagen, May 23rd-25th 2019

by Henrik Anders Lindén

Dear colleagues, We are organising a somewhat unusual workshop this coming May where we still have some seats left. The purpose of the workshop is to gather leading neuroscientists to discuss how a fundamental brain theory could be formulated. Each participating speaker has been given as homework to prepare a talk describing their view on such a theory, and to speculate on aspects where they don’t yet have the answers. The workshop will be a “real” workshop the sense that the invited speakers will work together on formulating a theory, and spend most of the time on discussions. The workshop is the second in a series, where the outcome of the first workshop (held in September 2016) was published in a Neuron issue published in June 2017: https://www.cell.com/neuron/issue?pii=S0896-6273(16)X0012-8 The confirmed speakers are: - Adrienne Fairhall, Univ. Washington, Seattle, USA - Alexa Riehle, CNRS, Marseille, France - Bing Brunton, Univ. Washington, Seattle, USA - Gyorgy Buzsaki, NYU, New York, USA - Haime Hirase, RIKEN, Wako,Japan - Jack Cowan, Univ. Chicago, Chicago, USA - Peter Dayan, MPI, Tübingen, Germany - Richard Morris, Univ. Edinburgh, Edinburgh, UK - Sara Solla, Northwestern Univ., Chicago, USA - Sophie Denève, ENS, Paris, France - Terry Sejnowski, Salk Institute, San Diego, USA - Wulfram Gerstner, EPFL, Lausanne, Switzerland - Yiota Poirazi, IMBB-FORTH, Heraklion-Crete, Greece - Zhaoping Li, MPI, Tübingen, Germany. Time: May 23rd-25th 2019, between 9-17 each day Place: The Carlsberg Academy, Copenhagen, Denmark. Information about the venue can be found here: https://www.carlsbergfondet.dk/en/About-the-Foundation/The-Carlsberg-Founda…<https://www.carlsbergfondet.dk/en/About-the-Foundation/The-Carlsberg-Founda…'s-home/The-Carlsberg-Academy> Registration: Attendance is free of charge but registration is required. (Note also that to be able to keep the registration free of charge no meals are included during the workshop.) Please register here: https://in.ku.dk/forms/how_brains_work/ See also the workshop homepage: https://in.ku.dk/seminars-and-events/workshop-developing-a-theory-on-how-br… Workshop steering board: Sophie Denève, John Hertz, Richard Morris, Maiken Nedergaard, Henrik Lindén and Per Roland On behalf of the steering board of the Copenhagen Initiative, Henrik Lindén and Per Roland (University of Copenhagen, Denmark) -- Henrik Lindén, PhD Assistant professor (adjunkt), University of Copenhagen Department of Neuroscience Blegdamsvej 3 DK-2200 Copenhagen N email: hlinden(a)sund.ku.dk<mailto:hlinden@sund.ku.dk> web: http://lindenh.wordpress.com

April 28, 2019

Staff scientist position in the Section on Neurobiology of Fear and Anxiety, NIMH/NIH

by Ryan Philips

The National Institute of Mental Health (NIMH), a major research component of the National Institutes of Health (NIH), and the Department of Health and Human Services (DHHS), is seeking exceptional candidates for a Staff Scientist position in the Intramural Research Program (IRP), Section on Neurobiology of Fear & Anxiety. This section examines neural systems models of emotion/cognition interactions. This is done in two ways: one that focuses on anxiety in health and disease, and the other that uses a developmental perspective using large datasets. Four types of data are exploited, clinical/behavioral assessment, psychophysiology, fMRI (particularly 7T high-resolution scanner) and MEG. The candidate must have a doctoral degree (PhD) in computational neuroscience, or computer science/engineering and at least 5 years of experience post Ph.D. analyzing large datasets, modeling complex neural systems, using advanced machine learning algorithms. Experience with technical computing in MATLAB, R, C++ and a strong mathematical skill set is required. Knowledge of multi threaded and paralell computing environments is desirable. An interest in neuroscience or prior experience in neuroscience related fields is a plus. The staff scientist is expected to be a key member of the Section on Neurobiology of Fear and Anxiety, contributing to analytical methodology, design of new projects. Salary will be commensurate with education and experience. Applicants should send curriculum vitae and two letters of recommendation to Monique Ernst, MD, PhD, 301-675-4525, ernstm(a)mail.nih.gov. Applications will be accepted beginning April 1st. The position will be open until filled. HHS and NIH are Equal Opportunity Employers. Applications from women, minorities and persons with disabilities are strongly encouraged.

April 27, 2019