- Comp-neuro - lists.cnsorg.org

CNS 2014 workshop on using the NSG for parallel simulations

by Ted Carnevale

The Neuroscience Gateway Portal (NSG) eliminates most administrative and technical barriers to High Performance Computing (HPC) resources, so that computational neuroscientists can readily use simulators such as Brian, GENESIS 3, NEST, NEURON, and PyNN to carry out parallel simulations. To find out how the NSG can accelerate your own modeling project, come to the workshop "Running parallel simulations on HPC resources via the Neuroscience Gateway Portal" which starts at 9 AM on Wednesday, July 30, at the CNS 2014 meeting. The workshop will include a presentation on the NSG itself, plus * presentations by modelers who are using NSG in their research projects --Timothy Rumbell, Mount Sinai School of Medicine, New York, USA: "Modeling of cortical neurons in aging monkeys", --Marianne Bezaire, University of California Irvine, Irvine, USA: "Using the NSG for a large-scale parallel computer model of the CA1 network," * a presentation by a member of the development team of one of the simulators that is available through the NSG --Marcel Stimberg, École Normale Supérieure and Institut de la Vision, Paris, France: "The Brian 2 spiking neuronal network simulation tool" Relevant webpages: http://www.cnsorg.org/cns-2014-workshops-program http://www.nsgportal.org/workshop.html

July 7, 2014

ACCV 2014 Workshop: Intelligent Mobile & Egocentric Vision (IMEV 2014)

by Cheston Tan

Call for Papers ACCV 2014 Workshop: Intelligent Mobile & Egocentric Vision (IMEV 2014) November 1 or 2, 2014, Singapore http://mml.citi.sinica.edu.tw/IMEV2014/home.htm The goal of IMEV 2014 is to identify and promote novel computer vision algorithms, systems and frameworks, which are particularly suitable for intelligent and interactive information processing on mobile and wearable computing platforms. This is the 3rd workshop in the series: this year, we expand the scope to include egocentric vision, an exciting emerging topic in computer vision.IMEV 2014 aims to bring together researchers to present latest developments and technical solutions in the domain of intelligent mobile and egocentric vision, including novel algorithms, applications, and systems. Research topics relevant to, but not limited to, the following areas are welcome: Mobile Vision - Feature extraction on mobile devices - Motion analysis and recovery for mobile cameras - Gesture/object/location recognition with mobile cameras - 3D mobile vision - Augmented reality on mobile devices - Human computer interaction with mobile devices - Computer vision applications on hand-held devices - Indexing and retrieval of images and videos for mobile devices - Multi-sensor integration for mobile vision - Hardware and embedded systems for mobile vision - Mobile vision incorporated with robot vision - Related MPEG standards- CDVS (Compact Descriptors for Visual Search) and CDVA (Compact Descriptors for Video Analysis) - Other topics related to mobile vision. Egocentric Vision - Visual feature learning from FPV videos - Egocentric video summarization, life-logging - Social activity analysis from FPV videos - Activity recognition in first-person vision - Eye-gaze tracking & attention modeling - Object recognition & tracking in FPV videos - Scene understanding in first-person video - Human Computer Interaction issues in first-person vision - Privacy issues in first-person video - Other topics related to egocentric vision. Submission should be in the ACCV 2014 format. Please consult the ACCV submission website for the exact formatting and template. IMEV 2014 workshop paper submission website is via the CMT system: https://cmt.research.microsoft.com/IMEV2014. The proceedings will be published by Springer in the Lecture Notes in Computer Science (LNCS) series. Preliminary Important Dates: Paper Submissions Sep 1, 2014 - 23:59 PDT (GMT+8) Author Notification Sep 15, 2014 - 23:59 PDT (GMT+8) Camera Ready Sep 20, 2014 - 23:59 PDT (GMT+8)

July 6, 2014

post-doctoral fellowships in neural correlates of hearing at U. Penn

by Yale Cohen

We are seeking highly motivated post-doctoral fellows to participate in a research program that tests the neural bases of sound perception. This research will be conducted at the University of Philadelphia. The goals of these projects are to test the contribution of various regions of the auditory cortex and prefrontal cortex to sound perception in non-human primates. Candidates should have a PhD. Those with an MD will be considered but only if the candidates have a strong scientific background. A strong candidate will have experience in systems and computational neuroscience; recording and analysis of single- and multi-unit activity and local-field potentials from awake, behaving animals (in particular non-human primates); experience in training animals on operant tasks; analysis of behavioral data and electrophysiological data; computational-analysis skills; and programming skills. We are interested in individuals who have a good personality and can interact well with other members of the laboratory. The positions are funded through two new R01s and are available immediately. One of the grants is funded to Yale Cohen. The second is funded to both Yale Cohen and Yonatan Fishman. Salary will be based on experience and the NIH post-doctoral scale. The University of Pennsylvania has an outstanding environment for neuroscience; in particular, systems and computational neuroscience. The environment is further enriched by the PIs’ ongoing collaborations with other members of the Penn Neuroscience community. For more information or to apply, contact Yale Cohen (YaleECohen(a)gmail.com) or Yon Fishman (yonatan.fishman(a)einstein.yu.edu) Interested applicants should send a CV; a brief statement of research interests; and names of 2-3 referees.

July 4, 2014

Reminder CfP BCBT2014 Summer School, Barcelona, Spain

by BCBT, Bústia Compartida

Dear all, applications and scholarships to attend the BCBT2014 summer school are now open. Do not miss it! Kind regards BCBT2014 *Barcelona Cognition, Brain and Technology Summer School (BCBT2014)* University Pompeu Fabra, Barcelona, Spain. September 1-12, 2014 http://bcbt.upf.edu/bcbt14/ We would like you to join us for the annual *"Barcelona Cognition, Brain and Technology summer school - BCBT2014 *" to be held from September 1-12, 2014 in Barcelona Spain. The summer school is at its seventh edition and is part of a series of events organized by the European coordination action Convergent Science Network of Biomimetics and Neurotechnology (http://csnetwork.eu/) BCBT is positioned at the interface between biology and future and emerging technologies with an emphasis on the principles underlying brains and their translation to avant-garde technologies. BCBT promotes a shared systems-level understanding of the functional architecture of the brain and its possible emulation in artificial systems. This is the 7th year of BCBT, which ran with great success in previous years thanks to an excellent line-up of outstanding speakers (see bcbt.upf.edu for previous editions of the school). BCBT lectures are available online (see http://csnetwork.eu/) as well as the CSN *Podcast interviews *with many of the BCBT speakers.. BCBT caters to the students and researchers involved in projects that are in the ambit of “Bio-ict convergence”, "Brain Inspired ICT", “Cognitive systems-robotics”. BCBT will offer up to 30 student slots for the practical workshops while as many researchers can register to attend the presentations and discussion sessions as are interested. For the lectures the limit will be placed at 60-70 given the capacity of the available lecture theatre. The atmosphere of the BCBT summer school is informal with the goal to stimulate in-depth discussion. There are presentations in the morning, usually 2, with the afternoons reserved for tutorials and projects for student participants and road-mapping workshops or further discussion for senior scientists. For the 2014 edition we plan a *1st week* of the school addressing *Evolutionary and Developmental aspects of nervous systems and behavior *(*Session 1*, 1-5 Sept*)*, while the *2nd week* will include presentations aimed at the investigation of *Core Brain Systems* with emphasis on the basal ganglia (*Session 2*, 8-9 Sept) followed by roadmapping sessions (*Session 3*, 10-11 Sept). Friday 12 is reserved for the presentation of the student projects to which everybody is invited. *Application deadline: August 2nd, 2014* For more information and to apply, please go to http://bcbt.upf.edu/bcbt14 *BCBT offers a number of scholarships.* These are CSN scholarships <http://csnetwork.eu/scholarships> and may cover travel expenses, accommodation and registration fee.http://bcbt.upf.edu/bcbt14 BCBT2014 is supported by the Convergent Science Network of Biomimetics and Neurotechnology (http://csnetwork.eu/) and is co-organized by Paul Verschure (BCBT Chair) SPECS, University Pompeu Fabra Barcelona, ES Tony Prescott (BCBT Co-Chair) University of Sheffield, UK Leah Krubizer (BCBT Co-Chair) UC Davis, CA, USA Anna Mura (BCBT Co-Chair) SPECS, University Pompeu Fabra Barcelona, ES

July 4, 2014

[job offer] Open-Source 3D printed humanoid robotics: Experienced engineer in electronics

by Pierre-Yves Oudeyer

Job offer at Inria Flowers, France within Poppy Project: Open-Source 3D printed humanoid robotics, http://www.poppy-project.org === Title: Experienced electronics engineer (2 years) === Apply at: pierre-yves.oudeyer(a)inria.fr and matthieu.lapeyre(a)inria.fr === Context The Flowers lab is a mixed team (Inria/Ensta ParisTech) composed of about 20 researchers and engineers. Flowers is a research team internationally renowned in developmental and humanoid robotics. It collaborates with several European, American and Asian laboratories, and coordinates several European projects. The team is also very active in the dissemination of science among the general public, and regularly participates in exhibitions and collaborations with artists as acting to make younger discover robotics. Web: https://flowers.inria.fr === Mission The research work conducted in the Flowers team led to the conception of Poppy (http://www.poppy-project.org/) one of the first humanoid robot in the world to be both open-source and 3D printed. It aims to become a community and multi-disciplinary platform for exploration and experimentation in robotics for Research, Art and Educational purposes. In its current version, Poppy is about 80cm tall for 3.5 kg. It has 25 joints motorized by Robotis smart-actuators (http://www.robotis.com/xe/dynamixel_en) These servo-motors, although effective, cost about 5.000€ on the 7.500€ of Poppy. Poppy is a low-cost robot in the world of research, however for its educational, training and scientific mediation missions, the cost limit its diffusion. Several improvements should be made in order to take down it cost and make Poppy even more accessible. In a team with a mechanical engineer and relying on existing work as Open Servo (http://openservo.com/) and Supermodified (http://letsmakerobots.com/node/18615) your role will be to work on control and automation of Poppy 2. You will also take involved in the execution of projects related to Poppy, and in a international working environment. === Description Conception of the general electronics architecture of the next versions of Poppy and working on low-cost actuator integration. Development of the library and low level control and integration with pypot (https://github.com/poppy-project/pypot) Profile • Practical experience in the design of electronics boards (electronic design automation (Eagle or KiCad), routing design rules, protection (ESD, short-cut), noise filtering) • Theoretical and practical experience with embedded systems (programming microcontroller, low-level communication, sensors, real time) • Control and design of medium power electronics (control loop, H bridge, design of heat sink) • Familiarity with the Arduino environment • Familiarity with the Python programming language • English proficiency • Team work Requirements • Minimum 2 years of experience • Master degree Benefits • Partial support of transportation costs. • Food restauration available on site. • Dynamic and pleasant working ambiance Additional Information • Duration of contract: 24 months • Estimated date of employment: 1 October 2014 • Monthly gross salary: 2600 euros to 3500 euros (depending on experience). For more information about the position, contact pierre-yves.oudeyer(a)inria.fr and matthieu.lapeyre(a)inria.fr

July 4, 2014

New journal: Neuropsychiatric Electrophysiology

by Martijn Arns

Dear colleagues, I wanted to point your attention to this new open access journal that was just started with Nash Boutros as Editor in Chief: Neuropsychiatric Electrophysiology: http://www.npepjournal.com<http://www.npepjournal.com/> (NPEP) is an open access journal for researchers and clinicians interested in the applications of electrophysiological techniques for probing basic electrophysiological aberrations in neuropsychiatric disorders. The journal will span basic neuroscience theory, technology and methodology, as well as clinical research and practice, with a focus on moving electrophysiology laboratory findings from the bench to bedside. NPEP welcomes research utilizing various diagnostic and therapeutic techniques as they apply to neuropsychiatric conditions, as well as studies bridging the gap between electrophysiology and neuroimaging, genetics and pharmacology. Kind regards, Martijn Arns, PhD Director / Researcher Twitter: @Brainclinics Research Institute Brainclinics Brainclinics Treatment Bijleveldsingel 34 6524 AD Nijmegen The Netherlands Tel: +31(0)24-7503505 GSM: +31 (0)6-48177919 Fax: +31(0)24-8901447 E-mail: martijn(a)brainclinics.com<mailto:martijn@brainclinics.com> URL: www.brainclinics.com<http://www.brainclinics.com>

July 4, 2014

[publication and call for dialog] IEEE CIS Newsletter on Autonomous Mental Development 10th anniversary !

by Pierre-Yves Oudeyer

Dear colleagues, It is my pleasure to announce the release of the latest issue of the IEEE CIS Newsletter on Autonomous Mental Development, which is now celebrating its 10th anniversary ! This is the biannual newsletter of the computational developmental sciences and developmental robotics community, studying mechanisms of lifelong learning and development in machines and humans. It has progressively become a place of lively and inspiring scientific dialogues spanning an incredible network of topics over the years, with the contributions of many key actors of computational developmental sciences. It is available at: http://www.cse.msu.edu/amdtc/amdnl/AMDNL-V11-N1.pdf Highlights of this issue: === Dialog initiated by Katarina Pastra, with responses from Rick Dale, Katharina Rohlfing et al., Gary Lupyan, Catriona Silvey, Kerstin Fischer and Emmanuel Dupoux. === "How are Grammatical Constructions Linked to Embodied Meaning Representations?" This dialog explores various facets of the interaction between the formation of linguistic and conceptual/sensorimotor structures, and in particular the hypothesis that language as a communication system may have evolved as a byproduct of language as a tool for organising conceptual structures. === New dialog initiated by Katharina Rohlfing, Britta Wrede and Gerhard Sagerer === “Trained on everything" In the years to come, one very important challenge in developmental sciences is education. Taking an integrated and interdisciplinary approach requires to handle with dexterity concepts and methods from diverse scientific fields ranging from psychology, neuroscience, biology, robotics, computer science or mathematics. How can we grow a community of young researchers mastering the latest advances? How can we teach them to establish cross-disciplinary collaboration and impact? These are the questions raised in the new dialogue initiation. Those of you interested in reacting to this dialog initiation are welcome to submit a response (contact pierre-yves.oudeyer(a)inria.fr) by Septembet 15th, 2014. The length of each response must be between 600 and 800 words (including references). Let me remind you that previous issues of the newsletter are all open-access and available at: http://www.cse.msu.edu/amdtc/amdnl/ I wish you a stimulating reading! Best regards, Pierre-Yves Oudeyer, Editor of the IEEE CIS Newsletter on Autonomous Mental Development Research director, Inria Head of Flower project-team Inria and Ensta ParisTech, France http://www.pyoudeyer.com https://flowers.inria.fr http://www.poppy-project.org

July 3, 2014

CFP: DATA STREAMS TRACK - ACM SAC 2015

by Carlos Ferreira

================================================== ACM Symposium on Applied Computing 2015 The 30th Annual ACM Symposium on Applied Computing in Salamanca, Spain, April 13 – 17, 2015. http://www.acm.org/conferences/sac/sac2015/ Data Streams Track http://www.cs.waikato.ac.nz/~abifet/SAC2015/ =================================================== CALL FOR PAPERS The rapid development in information science and technology in general and in growth complexity and volume of data in particular has introduced new challenges for the research community. Many sources produce data continuously. Examples include sensor networks, wireless networks, radio frequency identification, health- care devices and information systems, customer click streams, telephone records, multimedia data, scientific data, sets of retail chain transactions, etc. These sources are called data streams. A data stream is an ordered sequence of instances that can be read only once or a small number of times using limited computing and storage capabilities. These sources of data are characterized by being open-ended, flowing at high-speed, and generated by non stationary distributions. TOPICS OF INTEREST We are looking for original, unpublished work related to algorithms, methods and applications on data streams. Topics include (but are not restricted) to: * Data Stream Models * Languages for Stream Query * Continuous Queries * Clustering from Data Streams * Decision Trees from Data Streams * Association Rules from Data Streams * Decision Rules from Data Streams * Bayesian networks from Data Streams * Feature Selection from Data Streams * Visualization Techniques for Data Streams * Incremental on-line Learning Algorithms * Single-Pass Algorithms * Temporal, spatial, and spatio-temporal data mining * Scalable Algorithms * Real-Time and Real-World Applications using Stream data * Distributed and Social Stream Mining IMPORTANT DATES (strict) 1. Paper Submission: September 12, 2014 2. Author Notification: November 17, 2014 3. Camera‐ready copies: December 8, 2014 PAPER SUBMISSION GUIDELINES Papers should be submitted in PDF using the SAC 2015 conference management system: http://www.softconf.com/f/sac2015/. Authors are invited to submit original papers in all topics related to data streams. All papers should be submitted in ACM 2-column camera ready format for publication in the symposium proceedings. ACM SAC follows a double blind review process. Consequently, the author(s) name(s) and address(s) must NOT appear in the body of the submitted paper, and self-references should be in the third person. This is to facilitate double blind review required by ACM. All submitted papers must include the paper identification number provided by the eCMS system when the paper is first registered. The number must appear on the front page, above the title of the paper. Each submitted paper will be fully refereed and undergo a blind review process by at least three referees. The conference proceedings will be published by ACM. The maximum number of pages allowed for the final papers is 6 pages. There is a set of templates to support the required paper format for a number of document preparation systems at: http://www.acm.org/sigs/pubs/proceed/template.html For accepted papers, registration for the conference is required and allows the paper to be printed in the conference proceedings. An author or a proxy attending SAC MUST present the paper. This is a requirement for the paper to be included in the ACM/IEEE digital library. No-show of scheduled papers will result in excluding the papers from the ACM/IEEE digital library. STUDENT RESEARCH COMPETITION Graduate students seeking feedback from the scientific community on their research ideas are invited to submit original abstracts of their research work in areas of experimental computing and application development related to SAC 2015 Tracks. The SRC program is designed to provide graduate students the opportunity to meet and exchange ideas with researcher and practitioners in their areas of interest. All research abstract submissions will be reviewed by researchers and practitioners with expertise in the track focus area to which they are submitted. Authors of selected abstracts will have the opportunity to give poster and oral presentations of their work and compete for three top wining places. The SRC committee will evaluate and select First, Second, and Third place winners. The winners will receive cash awards and SIGAPP recognition certificates during the conference banquet dinner. Authors of selected abstracts are eligible to apply to the SIGAPP Student Travel Award program for support. Graduate students are invited to submit research abstracts (minimum of two pages; maximum of four pages) following the instructions published at SAC 2015 website. Submission of the same abstract to multiple tracks is not allowed. Submissions must address original and unpublished research work related to a SAC track, with emphasis on the innovation behind the research idea. The submission should address the research problem being investigated, the proposed approach and research methodology, and sample preliminary results of the work. In addition, the abstract should reflect on the originality of the work, innovation of the approach, and applicability of the results to real-world problems. All abstracts must be submitted thought the START Submission system. If you encounter any problems with your submission, please contact the Program Coordinator.

July 3, 2014

PhD Studentship in Peripheral Nerve Decoding Algorithms

by Simon Schultz

Dear all, The following 4-year PhD studentship (for start October 2014) is open. Note that the studentship is open to EU students. Cheers, Simon Peripheral nerve decoding algorithms for bioelectronic medicines Supervisors: Simon Schultz (Bioengineering), Nick Jones (Mathematics), Hannah Tipney (GSK) This project is one of 12 studentships for 2014/15 in the new EPSRC Centre for Doctoral Training in Neurotechnology for Life and Health (see http://www3.imperial.ac.uk/neurotechnology/cdt) Bioelectronic medicine, in which devices connected to groups of individual nerve fibres are used to control the patterns of electrical signals to restore health to organs and biological functions, has been suggested to have the potential to make major advances in the treatment of conditions resistant to drugs, including diabetes, obesity, hypertension and pulmonary diseases (Famm et al, Nature 496:159-61, 2013). The development of bioelectronic medicines, however, is contingent upon the existence of suitable technology for monitoring and perturbing activity in peripheral nerve fibres; in particular, being able to "read out" and interpret signals carried by a peripheral nerve fibre is an essential milestone. In this project, we will develop decoding algorithms capable of reading out both continuous physiological signals, and discrete "events", from peripheral nervous system (PNS) electrical signals. These algorithms will be applied to a variety of datasets collected by members of a research network in Bioelectronic Medicines that has been established by GlaxoSmithKline, plc. The project will involve two phases. The first year will comprise an MRes Project, in which the student will gain a deep understanding of the different approaches that can be taken to decoding physiological signals, testing algorithms on simulated data, which will be generated in the course of the project; we expect this computational model of a peripheral nerve to be a major output of the MRes year. In the following years, and exploiting and advancing a new signal processing architecture, the student will develop refined decoding algorithms optimised for use with peripheral nerve signals at several spatial scales, and will work with research groups across the GSK network to apply these algorithms to real PNS datasets. Contact Dr Simon Schultz, s.schultz(a)imperial.ac.uk for more information on the project. Who should apply? The CDT programme is not a standard PhD programme. Throughout the 4 years, there is considerable emphasis upon multidisciplinary and transferrable skills, through centre activities beyond the individual research project. Applicants should be seeking to undertake a multidisciplinary 4-year research training programme at the interface between neuroscience and engineering. Applicants should have or expect to obtain a first or upper second class degree in an engineering or physical sciences discipline. Students with a biological or medical sciences background will be considered in exceptional circumstances, provided they can demonstrate substantial quantitative skills. Funding The studentship will cover tuition fees and a tax free stipend of approximately £16,000 per year. A generous annual allowance will be provided for research consumables and for conference attendance. How to apply Please visit: http://www3.imperial.ac.uk/registry/admissions/howtoapplypg to make your application via the Imperial College online "Embark" system. Once in the application form, candidates should select the option: "MSc, MRes - to be followed by Research (I have 4 years funding)" from the preliminary questions section and then choose Programme Title: "Neurotechnology [1plus3] (MRes 1YFT)|H6NT|SK|FT|CN". Please contact Kate Hobson (k.hobson(a)imperial.ac.uk) if you have questions about the application process. Deadline for applications: 31st July 2014

July 3, 2014

New book "Understanding Vision: theory, models, and data"

by Zhaoping Li

This book "Understanding Vision: theory, models, and data" is published by Oxford University Press in May 2014 and, by now, it is available from various online sites and shops worldwide. For more information, go to http://www0.cs.ucl.ac.uk/staff/zhaoping.li/VisionBook.html The book's Table of Contents can be viewed at http://www0.cs.ucl.ac.uk/staff/zhaoping.li/prints/TableOfContents.pdf Teaching and learning support for the book (e.g., ppt files for the figures in the book) is also available and will be updated at http://www0.cs.ucl.ac.uk/staff/zhaoping.li/VisionBook.html . Readership: Computational neuroscientists, visual psychologists/cognitive scientists, Visual neuroscientists/physiologists/anatomists, Researchers in machine vision or computer vision or robot vision The book is written in such a way that vision scientists, unfamiliar with mathematical details, should be able to conceptually follow the theoretical principles and their relationship with physiological, anatomical, and psychological observations, without going through the more mathematical pages. For those with a physical science background, especially those from machine vision, this book serves as an analytical introduction to biological vision. It can be used as a textbook or a reference book in a vision course, or a computational neuroscience course for graduate students or advanced undergraduate students. It is also suitable for self-learning by motivated readers. In addition, for those with a focused interest in just one of the topics in the book, it is feasible to read just the chapter on this topic without having read or fully comprehended the other chapters. In particular, Chapter 2 presents a brief overview of experimental observations on biological vision; Chapter 3 is on encoding of visual inputs, Chapter 5 is on visual attentional selection driven by sensory inputs, and Chapter 6 is on visual perception or decoding. Please let me know if you need more information. best wishes, Li Zhaoping

July 3, 2014