- Comp-neuro - lists.cnsorg.org

Please post: postdoctoral fellowship available

by Andy Edwards

Postdoctoral fellowship in computational neuroscience: Simula, Oslo Simula Research Laboratory is pleased to offer a 4-year postdoctoral fellowship in computational modelling of multiscale processes in neuroplasticity. Please see the full position description and requirements at our applications page: https://www.simula.no/about/job/postdoctoral-fellowship-neur al-systems-modeling Andy Edwards Senior Scientist Simula Research Laboratory

July 25, 2017

MBCC 2017: ICCV Workshop on Mutual Benefits of Cognitive and Computer Vision - Call For Papers

by Christopher Kanan

## CALL FOR PAPERS (CfP) ## ICCV International Workshop on ‘Mutual Benefits of Cognitive and Computer Vision (MBCC)’ 29 October 2017 Venice, Italy (https://sites.google.com/site/mbcc2017w/home) _____________ Aim and Scope As researchers working at the intersection of biological and machine vision, we have noticed an increasing interest in both communities to understand and improve on each other’s insights. Recent advances in machine learning (especially deep learning) have led to unprecedented improvements in computer vision. These deep learning algorithms have revolutionized computer vision, and now rival humans at some narrowly defined tasks such as object recognition (e.g., the ImageNet Large Scale Visual Recognition Challenge). In spite of these advances, the existence of adversarial images (some of which have perturbations imperceptible to humans) and rather poor generalizability across datasets point out the flaws present in these networks. On the other hand, the human visual system remains highly efficient at solving real-world tasks and capable of solving many visual tasks. We believe that the time is ripe to have extended discussions and interactions between researchers from both fields in order to steer future research in more fruitful directions. This workshop will compare human vision to state-of-the-art machine perception methods, with specific emphasis on deep learning models and architectures. Our workshop will address many important questions. They include: 1) What are the representational differences between human and machine perception? 2) What makes human vision so effective? and 3) What can we learn from human vision research? Addressing these questions is not as difficult as previously thought due to technological advancements in both computational science and neuroscience. We can now measure human behavior precisely and collect huge amounts of neurophysiological data using EEG and fMRI. This places us in a unique position to compare state-of-the-art computer vision models and human behavioral/neural data, which was impossible to do a few years ago. However, this advantage also comes with its own set of problems: Which task/metric to use for comparison? What are the representational similarities? How different are the computations in a biological visual system when compared to an artificial vision system? How does human vision achieve invariance? This workshop is a great opportunity for researchers working on human and/or machine perception to come together and discuss plausible solutions to some of the aforementioned problems. ______ Topics for submission include but are not limited to: - architectures for processing visual information in the human brain and computer vision (e.g. feedforward vs feedback, shallow vs deep networks, residual, recurrent, etc) - limitations of existing computer vision/deep learning systems compared to human vision - learning rules employed in computer vision and by the brain (e.g. unsupervised/semi-supervised learning, Hebb rule, Spike timing dependent plasticity) - representations/features in humans and computer vision - tasks/metrics to compare human and computer vision (e.g. eye fixation, reaction time, rapid categorization, visual search) - new benchmarks (e.g. datasets) - generalizability of machine representation to other tasks - new techniques to measure and analyze human psychophysics and neural signals - the problem on invariant learning - conducting large-scale behavioral and physiological experiments (e.g., fMRI, cell recording) ______________ Invited Speakers We have invited leading researchers from both Cognitive Science and Computer Vision to inspire discussions and collaborations. 1. Michael Tarr, Carnegie Mellon University 2. Davide Zoccolan, International School for Advanced Studies (SISSA), Trieste, Italy ___________________ Submission Guidelines We are inviting both full paper (5-8 pages) and extended abstract (2-4 pages) submissions to the workshop. Submitted papers must follow the ICCV paper format and guidelines (available on the ICCV 2017 webpage). All submissions will be handled via the CMT website: https://cmt3.research.microsoft.com/MBCC2017/ Full papers: The submitted papers should have a maximum length of 8 pages, including figures and tables; additional pages must contain only cited references. The review will be double-blind. Please make sure all authors or references to authors are anonymized. Full paper submissions must not have been published before. Extended abstracts: We invite submissions of extended abstracts of ongoing or already published work as well as demos or prototype systems (ICCV format). Authors are given the opportunity to present their work to the right audience. The review will be single-blind. ______________ Important Dates Full Paper submission: August 1st, 2017 Extended Abstract submission: August 5th, 2017 Notification of acceptance: August 15th, 2017 Camera-ready paper due: September 30th, 2017 Workshop: October 29th, 2017 (Morning Session) _____________________________ Workshop Organizing Committee Ali Borji, University of Central Florida Pramod RT, Indian Institute of Science Elissa Aminoff, Fordham University Christopher Kanan, Rochester Institute of Technology _______ Contact mbccw.iccv2017(a)gmail.com

July 23, 2017

BCBT2017 Summer School. Registration deadline August 1st!

by BCBT, Bústia Compartida

*Registration deadline postponed: 1 August 2017* For more information on how to apply, please go to BCBT2017-Eventum UPF <https://eventum.upf.edu/9240/detail/bcbt-2017.html> ------------------------------ ------------------------------------------------------------------ *Barcelona Cognition, Brain and Technology Summer School -BCBT2017* University Pompeu Fabra, Barcelona, Spain. 28 August - 8 September 2017 BCBT2017-Eventum UPF <https://eventum.upf.edu/9240/detail/bcbt-2017.html> Join us for the 10th edition of *"Barcelona Cognition, Brain and Technology summer school - BCBT2017 *" be held 28 August-8 September 2017 in Barcelona, Spain. The BCBT summer school is positioned at the interface between biology and future and emerging technologies with an emphasis on the principles underlying brains and their translation to avant-garde technologies. BCBT promotes a shared systems-level understanding of the functional architecture of the brain and its possible emulation in artificial systems. The summer school has been part of a series of events organized by the European coordination action Convergent Science Network of Biomimetics and Neurotechnology (*http://csnetwork.eu/ <http://csnetwork.eu/>*). This year the school is supported by the ERC project CDAC <http://specs.upf.edu/projects/2810> that investigates the role of consciousness in adaptive behavior combining empirical, computational and robot-based approach. BCBT is also supported by EPISENSE <https://www.humanbrainproject.eu/sp3>, a subproject of the Human Brain Project <https://www.humanbrainproject.eu/>(HBP) that investigates brain mechanisms of perception and memory. This is the 10th year of BCBT, which has run with great success in previous years thanks to an excellent line-up of outstanding speakers (see bcbt.upf.edu for previous editions of the school). BCBT lectures <https://www.youtube.com/user/ConvergentScienceNw/playlists> are available online with the BCBT *Podcast interviews *with many of the BCBT speakers. BCBT caters to students and researchers involved in projects that are in the ambit of “BIO-ICT convergence”, "Brain Inspired ICT", “Cognitive systems-robotics”, “Cognitive and neural systems”, “Foundations of social cognition”. BCBT will offer up to 30 student slots for the practical workshops, while as many researchers can register to attend the presentations and discussion sessions as they are interested. The atmosphere of the BCBT summer school is informal with the goal to stimulate in-depth discussion. There are 1 or 2 presentations in the morning, with the afternoons reserved for tutorials and projects for student participants and road-mapping workshops or further discussion for senior scientists. For the 2017 edition, we plan a *1st week* of the school addressing *Neural basis of Consciousness *while the *2nd week* will include presentations aimed at the investigation of *Evolutionary and Developmental aspects of nervous systems and behavior.* Friday 8 is reserved for the presentation of the student projects to which everybody is invited. *BCBT is organized by* Paul Verschure, ICREA and University Pompeu Fabra Barcelona, ES, Tony Prescott, Sheffield University, UK Anna Mura, University Pompeu Fabra Barcelona, ES

July 23, 2017

NeuroMorpho.Org v7.2 released July 19th, 2017

by NeuroMorpho Administrator

Dear colleagues, We’re pleased to announce the July 19, 2017 release of Version 7.2 of NeuroMorpho.Org<http://neuromorpho.org/>, adding 7721 reconstructions from 83 new datasets. The repository now provides access to 70,025 cells and passed 7 million downloads in 163 countries. Please visit the What’s new page<http://neuromorpho.org/WIN.jsp> for details on the added data and other updates. The literature coverage was also updated to include publications through June 2017. We are continuously grateful to all the data contributors<http://neuromorpho.org/acknowl.jsp#DC> who freely share their hard-won tracings with the community. We appreciate any and all feedback and comments. Our apologies if you receive multiple versions of this message through cross-listing. Sincerely, The NeuroMorpho.Org team<http://neuromorpho.org/acknowl.jsp#NMO> ---------------- Giorgio Ascoli<http://krasnow1.gmu.edu/cn3/ascoli>, PhD University Professor Bioengineering Department<http://bioengineering.gmu.edu/>, Volgenau School of Engineering<http://volgenau.gmu.edu/> Neuroscience Program<http://neuroscience.gmu.edu/>, Krasnow Institute for Advanced Study<http://krasnow1.gmu.edu/> Director, Center for Neural Informatics, Structures, & Plasticity<http://krasnow1.gmu.edu/cn3> MS2A1 - George Mason University<http://gmu.edu/>, Fairfax, VA 22030-4444 Ph. +1(703)993-4383/+1(703)673-8894 Author of “Trees of the Brain, Roots of the Mind<http://www.amazon.com/Trees-Brain-Roots-Giorgio-Ascoli/dp/0262028980/>” (MIT Press, 2015<http://mitpress.mit.edu/books/trees-brain-roots-mind>) Founding Editor-in-Chief, Neuroinformatics<http://link.springer.com/journal/12021>

July 21, 2017

8th NeuralEnsemble CodeJam workshop

by Andrew Davison

Dear colleagues, You are invited to participate in the 8th NeuralEnsemble CodeJam workshop, which will take place 13th-15th September 2017 in Lausanne, Switzerland. http://neuralensemble.org/meetings/CodeJam8/ The goal of the CodeJam is to catalyze open-source, collaborative software development in computational and systems neuroscience and neuroinformatics, by bringing together researchers, students and engineers to share ideas, present their work, and write code together. Mornings are dedicated to invited and contributed talks, leaving the afternoons free for discussions, tutorials and code sprints. CodeJam #8 is sponsored by the Human Brain Project Best regards, Andrew -- Andrew Davison, PhD Unité de Neurosciences, Information et Complexité (UNIC) Centre National de la Recherche Scientifique 1, avenue de la Terrasse 91198 Gif sur Yvette France Tel: +33 1 69 82 34 51 http://www.andrewdavison.info/

July 21, 2017

PhD studentship in Computational Neuroscience/Machine Learning

by Vassilis Cutsuridis

PhD Position in Computational Neuroscience/Machine learning MLearn Research Group School of Computer Science University of Lincoln UK Applications are invited for a PhD position in the MLearn Research Group at the University of Lincoln. Projects involve the development and simulation of models of neurons and neuronal networks hippocampal memory functions (Cutsuridis V, et al. (2010). Encoding and retrieval in the hippocampal CA1 microcircuit model. *Hippocampus*, 20(3): 423-446) <http://vassiliscutsuridis.com/docs/Journal_papers/CutCobGraHippo2010.pdf> and/or applications of machine learning (deep learning) techniques for the analysis of data. A description of our research interests and a list of publications can be found on our webpage (http://mlearn.lincoln.ac.uk/) Applicants should have excellent computational and numerical skills and a very good first degree in computer science, biology, maths, physics, neuroscience, or a related discipline. Successful candidates are eligible for a research studentship award from the University (GBP 14,553 per annum bursary plus payment of the student fees). This studentship is only open to UK and EU students. The ideal candidate should be highly motivated, technically skilled, a team player and driven to push forward the development of the next generation of deep associative memory neural-networks. Your written and spoken English skills should be excellent. As a PhD student, you may also have the opportunity to teach as a demonstrator in the School of Computer Science. Research in Computer Science at the University of Lincoln has been recognised as internationally excellent and world leading. The School of Computer Science provides a very stimulating environment, offering a large number of specialised and interdisciplinary seminars as well as general training and researcher development opportunities. The University is situated in Lincoln, two hours north of London. Please contact Dr Vassilis Cutsuridis (vcutsuridis(a)lincoln.ac.uk) or Prof. Stefanos Kollias (skollias(a)lincoln.ac.uk) for informal enquiries. If you’re interested in this position and you would like to apply, please send your CV, statement of research interests, three reference letters and a photo to Dr. Vassilis Cutsuridis: vcutsuridis(a)lincoln.ac.uk Applications will be assessed on a rolling basis, so please apply as soon as possible. Kind regards, Vassilis --- Dr Vassilis Cutsuridis School of Computer Science University of Lincoln Lincoln LN6 7TS U.K. Tel: +44 (0) 1522 83 5107 Email: vcutsuridis(a)lincoln.ac.uk Web: http://staff.lincoln.ac.uk/vcutsuridis Personal Web: http://www.vassiliscutsuridis.com/

July 20, 2017

Neuromodulation of Neural Microcircuits NM2 Conference 2017

by Ramaswamy Srikanth

We are delighted to announce the upcoming <https://nm2.epfl.ch> Neuromodulation of Neural Microcircuits (<https://nm2.epfl.ch>NM2) Conference 2017<https://nm2.epfl.ch>. The NM2 Conference will be held at the EPFL, Lausanne, Switzerland on the 18th and 19th of Sep. 2017 and at the Campus Biotech in Geneva, Switzerland on the 20th of Sep. 2017. Neuromodulators dynamically reconfigure neural microcircuits and shape brain states by controlling the function of neurons and glia, dendrites, and synapses. NM2 will bring together world-leading experts to: • Identify the state-of-the-art mechanisms of the neuromodulation of neural microcircuits • Illuminate various strategies enabling the measurement of neuromodulatory states in brain health and disease • Integrate knowledge to build a unifying view of the neuromodulation of different brain regions • Inform and attract new talent to drive forward neuromodulation research • Inspire future directions that will transform our understanding of the neuromodulation of brain function and dysfunction and therapeutic intervention NM2 has an exciting program<https://nm2.epfl.ch/page-145616-en.html> with a stimulating lineup of speakers<https://nm2.epfl.ch/page-145624-en.html>! Please mark your calendars to participate in shaping the future course of neuromodulatory research! Registration<https://nm2.epfl.ch/page-145625-en.html> includes coffee breaks, lunch, refreshments and poster sessions. PhD. students and postdocs are particularly encouraged to apply for several travel awards<https://nm2.epfl.ch/page-146294-en.html> by submitting poster abstracts<https://nm2.epfl.ch/page-146294-en.html>. Some abstracts will be selected for flash talks. Early bird registration is open until July 31st, 2017. Abstract submission is open until August 13th, 2017. We look forward to welcoming you at NM2 in beautiful Switzerland! Best regards from the scientific committee of NM2, Srikanth Ramaswamy Henry Markram Mriganka Sur Anita Disney Menahem Segal Michael Hasselmo Seung-Hee Lee Alexander Thiele Amy Arnsten [cid:CCBC7D9D-9041-4146-88BA-CC744BDBB811@epfl.ch]

July 20, 2017

PhD scholarship "Deep Learning in clinical neuroimaging", Charité Berlin

by Kerstin Ritter

Dear all, I am offering a PhD scholarship in "Deep Learning in clinical neuroimaging" at Charite Berlin, starting in October 2017 (initially for 2 years). See announcement below: _________________________________________ Deep Learning in clinical neuroimaging PhD scholarship (starting October 2017, initially for 2 years) At the Berlin Center for Advanced Neuroimaging and Bernstein Center for Computational Neuroscience (Charite), we are looking for a motivated and highly talented PhD student for various research questions within the interdisciplinary field of deep learning and clinical neuroimaging. In particular, we employ convolutional neural networks for finding new representations from neuroimaging data in order to predict disease conversion and future clinical disability in neurological as well as psychiatric diseases. Whereas previous disease decoding approaches mostly relied on expert-based extraction of features in combination with standard classification algorithms and thus strongly depend on the choice of data representation, convolutional networks are capable of learning hierarchical information directly from raw imaging data. By this, they have a great potential for finding unexpected and latent data characteristics and might perform as a real “second reader”. A major focus will be on visualization techniques to make the learned content of convolutional neural networks visible. Requirements for the PhD student: - Very good degree in computer science, mathematics, physics, psychology, computational neuroscience or related subject. - Very good programming skills (e.g. Python) - Experience in machine learning - Good writing and communication skills (in English) Please send your application (motivation+CV) in one pdf-file (in English or German) to: Dr. Kerstin Ritter Berlin Center for Advanced Neuroimaging, Bernstein-Zentrum für Computational Neuroscience Charité - Universitätsmedizin Berlin Sauerbruchweg 4, Charitéplatz 1, 10117 Berlin Tel.: + 49 30 450 539364; Email: kerstin.ritter(a)bccn-berlin.de _________________________________________________ Thank you very much! Best wishes, Kerstin Ritter _______________________________________________ Dr. rer. nat. Kerstin Ritter, nee Hackmack Bernstein Center for Computational Neuroscience Berlin Center for Advanced Neuroimaging Charité - Universitätsmedizin Berlin Sauerbruchweg 4, Charitéplatz 1, 10117 Berlin

July 20, 2017

Creating a list of important computational predictions

by Yiota Poirazi

Dear all, I believe you would agree that, the greatest recognition of our computational work comes with the experimental verification of our computational predictions. To highlight the most important outcomes of our theoretical work and facilitate a closer interaction with experimental labs so as to increase the chances of our predictions being experimentally tested, I would like to encourage you to nominate your favorite prediction at the following google form: https://docs.google.com/forms/d/e/1FAIpQLSeJZ2RrXJ0nZonIuyNzN0Cl gXDKDb7xTzoJOiqZTGxm9Kh7ow/viewform?c=0&w=1&usp=mail_form_link This effort started during the CNS 2017 meeting in Antwerp with the support of the OCNS Board. The resulting list will be posted on the CNS 2017 web site and disseminated in social media, as a reference for experimentalists. Thank you very much for supporting this important effort! Best wishes, Yiota Poirazi -- Panayiota Poirazi, Ph.D. Research Director Computational Biology Laboratory Institute of Molecular Biology and Biotechnology (IMBB) Foundation of Research and Technology-Hellas (FORTH) Vassilika Vouton, P.O.Box 1385, GR 70013, Heraklion, Crete GREECE Tel: +30 2810 391139 Fax: +30 2810 391101 Εmail: poirazi(a)imbb.forth.gr Lab site: www.dendrites.gr FENS-Kavli Network of Excellence <http://www.fens.org/Outreach/FENS-Kavli-Network-of-Excellence/> -- This message has been scanned for viruses and dangerous content by *E.F.A. Project* <http://www.efa-project.org>, and is believed to be clean. Click here to report this message as spam. <http://mailgate1.imbb.forth.gr/cgi-bin/learn-msg.cgi?id=4BCD7A00A1.A57D7&to…> -- Panayiota Poirazi, Ph.D. Research Director Computational Biology Laboratory Institute of Molecular Biology and Biotechnology (IMBB) Foundation of Research and Technology-Hellas (FORTH) Vassilika Vouton, P.O.Box 1385, GR 70013, Heraklion, Crete GREECE Tel: +30 2810 391139 Fax: +30 2810 391101 Εmail: poirazi(a)imbb.forth.gr Lab site: www.dendrites.gr FENS-Kavli Network of Excellence <http://www.fens.org/Outreach/FENS-Kavli-Network-of-Excellence/>

July 20, 2017

2nd Announcement: Computational Neuroscience in Africa: isiCN IMBIZO 18

by Tim Vogels

Dear all, we would like to draw your attention to the IBRO SIMONS COMPUTATIONAL NEUROSCIENCE IMBIZO #isiCNI2018 Get to know (and help to build) African Computational and Theoretical Neuroscience. from 7 - 28 January 2018, Muizenberg Beach, Cape Town, South Africa http://isicni.gatsby.ucl.ac.uk <http://isicni.gatsby.ucl.ac.uk/> Application deadline: 15th August 2017 The #isiCNI2018 is a southern hemisphere summer school aiming to promote computational neuroscience in Africa. It will bring together international and local students under the tutelage of the world's leading experts in the field. Like its international sister courses, this three-week summer school aims to teach central ideas, methods, and practices of modern computational neuroscience through a combination of lectures and hands-on project work. Mornings will be devoted to lectures on topics across the breadth of experimental and computational neuroscience. The rest of the day will be spent working on research projects under the close supervision of expert tutors and faculty. Individual research projects will focus on the modelling of neurons, neural systems, behaviour, the analysis of state-of-the-art neural data, and the development of theories to explain experimental observations. Who should apply? This course is aimed at Masters and PhD level students though Honours or Postdoctoral students may also apply. Students should sufficient quantitative skills, (e.g. a background in mathematics, physics, computer science, statistics, engineering or related field). Some knowledge of neural biology will be useful but not essential. Experimental neuroscience students are encouraged to apply, but should ensure that they have a reasonable level of quantitative proficiency (i.e. at least second-year level mathematics or statistics and have done at least one course in computer programming). Please distribute this information as widely as you can. Essential details * Fee (which covers tuition, lodging, and meals): 1100 EUR * Generous scholarships and travel stipends are available based on merit and need * Application deadline: 15th August 2017 * Notification of results: End of September 2017 Information and application http://isicni.gatsby.ucl.ac.uk <http://isicni.gatsby.ucl.ac.uk/> Application form http://tinyurl.com/yc6zbvpo <http://tinyurl.com/yc6zbvpo> Questions? isicn.imbizo(a)gmail.com <mailto:isicn.imbizo@gmail.com> What is an Imbizo? \ɪmˈbiːzɒ\ | Xhosa - Zulu A gathering of the people to share knowledge. FACULTY Larry Abbott - Columbia University Adrienne Fairhall - Washington University Surya Ganguli* - Stanford University Peter Latham - University College London Blake Richards - University of Toronto Timothy Lillicrap - Google DeepMind Mate Lengyel - University of CambridgeJoseph Raimondo - University of Cape Town Yiota Poirazi - Foundation for Research and Technology - Hellas Srikanth Ramaswamy - EPFL Lausanne Tim Vogels - University of Oxford Byron Yu - Carnegie Mellon University Alex Antrobus (Gatsby Unit, UCL) Athanasia Papoutsi (Foundation for Research and Technology - Hellas) William Podladski (University of Oxford ) Friedemann Zenke (Stanford University / University of Oxford) and others, to be announced *not confirmed DIRECTORS Peter Latham (Gatsby Unit for Computational Neuroscience, UCL, UK) Joseph Raimondo (University of Cape Town, South Africa) Tim Vogels (University of Oxford, UK) Sponsors The isiCNI is made possible by the generous support from the Simons Foundation (https://www.simonsfoundation.org <https://www.simonsfoundation.org/>) and IBRO, the International Brain Research Organisation (http://ibro.info <http://ibro.info/>) Organizational Affiliates University of Cape Town, University College London, University of Oxford, TReND in Africa <http://trendinafrica.org/>, CNCB <http://www.cncb.ox.ac.uk/>, Gatsby Foundation <http://www.gatsby.org.uk/>, IBRO African Center for Advanced Training in Neurosciences at UCT

July 19, 2017