- Comp-neuro - lists.cnsorg.org

NEST User Workshop 3-4 November 2016 in Karlsruhe, Germany

by Hans Ekkehard Plesser

Dear all! The NEST Initiative is excited to invite all NEST users and developers to the second annual NEST User Workshop on 3-4 November 2016 in Karlsruhe, Germany. The Workshop provides an opportunity for the NEST Community to meet, exchange success stories, swap advice, learn about current developments in and around NEST and spiking network simulation and application. This year, the workshop will focus on the use of spiking networks in Neurorobotics and will kindly be hosted by Forschungszentrum Informatik (FZI) in Karlsruhe, Germany, in collaboration with the Human Brain Project and Forschungszentrum Jülich. The workshop is supported by the Human Brain Project Education Office. Registration for the Workshop is now open at http://indico-jsc.fz-juelich.de/e/nest2016 where you also will find more information about the workshop program and ways to contribute. Deadline for contributions is 18 September, for registration 7 October. Participation is free of charge, but you will have to cover your travel costs. Space is limited, so please register soon! I am looking forward to seeing you in Karlsruhe! Hans Ekkehard Plesser President, The NEST Initiative -- Dr. Hans Ekkehard Plesser Associate Professor Dept. of Mathematical Sciences and Technology Norwegian University of Life Sciences PO Box 5003, 1432 Aas, Norway Phone +47 6723 1560 Email hans.ekkehard.plesser(a)nmbu.no Home http://arken.nmbu.no/~plesser

Sept. 2, 2016

Opportunity in Open Source Brain project for experienced software developer

by Padraig Gleeson

(Apologies for cross postings) The Open Source Brain initiative (http://www.opensourcebrain.org) is looking to hire an experienced software developer to work on the web infrastructure for collaborative development of models in computational neuroscience as part of our multidisciplinary group <http://silverlab.org/> at University College London: https://goo.gl/kROHnZ This would be a great opportunity for someone who has plenty of experience with Java/JavaScript development (and a good helping of Python and/or Ruby) to get a job at the leading edge of efforts to build a truly open infrastructure for modelling and understanding the brain. Previous experience in computational neuroscience is an advantage, though excellent software development skills in a web environment and a desire to make a difference in this field are essential. The successful applicant will have the opportunity to fully participate in the academic activities related to this initiative including contributing to publications and attending scientific conferences. Deadline for applications is 12th Sept 2016. For informal enquiries, please contact p.gleeson(a)ucl.ac.uk ----------------------------------------------------- Padraig Gleeson Room 321, Anatomy Building Department of Neuroscience, Physiology& Pharmacology University College London Gower Street London WC1E 6BT United Kingdom +44 207 679 3214 p.gleeson(a)ucl.ac.uk -----------------------------------------------------

Sept. 2, 2016

Post-doc position in computational cognitive neuroscience at UC Berkeley

by Anne Collins

Hello, I run the Computational Cognitive Neuroscience Lab at UC Berkeley ( https://www.ocf.berkeley.edu/~acollins/) and am looking for a postdoc. *Post-doctoral research position at the CCN lab at UC Berkeley:* My lab investigates reinforcement learning, decision-making and executive functions. I’m looking to hire a post-doc interested in these topics. You should have (or be nearing completion of) a PhD in psychology, neuroscience, cognitive science, or a related field. Ideal candidates would have expertise collecting and analyzing EEG or fMRI data, experience in developmental or patient studies, or both. Experience in computational modeling is also highly desirable, and programming experience is essential. However, I welcome applications from anyone with experience and interest in RL, decision-making, or executive functions. This position can begin immediately, but the start date is flexible. To apply, please send your CV, contact information for your references, and a short letter about why you’re interested in this position to Anne Collins ( annecollins(a)berkeley.edu) -- Anne Collins Assistant Professor Tolman Hall, 3429 Department of Psychology University of California, Berkeley (510) 664-7146

Sept. 1, 2016

Associate professor position in Data Science (Big Data)

by Hans Ekkehard Plesser

The Department of Mathematical Sciences and Technology (IMT) at the Norwegian University of Life Sciences (NMBU) as Ås near Oslo has a permanent, full-time position available for an Associate Professor in Data Sciences (Big Data). The position is part of the University's programme for the recruitment of top researchers, which aims to recruiting an internationally leading, early-career researcher with a high potential for NMBU. The position requires research of high international quality. Big Data is relevant to several of NMBU's academic communities working within the environmental sciences and biosciences, and is especially important in fields of research and teaching in IMT. The goal is for the position to contribute to collaborations in the field across academic communities at IMT and NMBU. The person appointed to the position must therefore have excellent collaboration skills. The position will include: • one PhD Position (3 years) • NOK 0.25 million in operating funds For a detailed description of the position, our expectations and conditions, please see https://www.jobbnorge.no/en/available-jobs/job/127472/associate-professor-i… Deadline for applications is Oct 1, 2016. Best regards, Hans Ekkehard Plesser -- Dr. Hans Ekkehard Plesser Associate Professor Dept. of Mathematical Sciences and Technology Norwegian University of Life Sciences PO Box 5003, 1432 Aas, Norway Phone +47 6723 1560 Email hans.ekkehard.plesser(a)nmbu.no Home http://arken.nmbu.no/~plesser

Sept. 1, 2016

Staff Scientists and Postdoctoral Researchers in Neural Data Analysis and Computational Neurosceince at the Center for Bioelectronic Medicine

by Zanos, Theodoros

The Center for Bioelectronic Medicine at the Feinstein Institute for Medical Research in NY (http://www.feinsteininstitute.org/) is building a multidisciplinary team to revolutionize medicine by determining the nature of neural control over molecular, cellular and organ functions of the body, the parts of the brain that regulate those nerves, and the signals that the brain receives to monitor cell and organ function. Projects will focus on determining which nerve fibers exert control, the types of signals those fibers use, and how these signals can be manipulated to treat diseases and conditions such as rheumatoid arthritis, paralysis, Crohn's disease, Alzheimer's disease, Parkinson's disease, diabetes, cancer and others. We are currently recruiting for Staff Scientists and Postdoctoral Researchers in the field of neural data analysis and computational neuroscience. The successful candidates will work in the Center for Bioelectronic Medicine, directed by Chad Bouton, in the Neural Decoding and Data Analytics Lab, led by Dr. Theo Zanos. The candidates will work on projects involving development of novel signal processing and machine learning methods to gain insights into: 1. Decoding and encoding mechanisms of the brain and peripheral nerves to and from stimuli, actions and other physiological functions 2. Reinforcement learning approaches used to select neural stimulation parameters and optimize outcomes 3. Beam-forming, blind source separation, and other techniques to directionally transmit or receive neural signals in peripheral nerves 4. Neural circuits through numerical modeling and biomarker profile analysis * PhD in Engineering, Computer Science, Statistics or a related field required; experience in one or more of the following areas required: - Analysis of Neural Signals - Computational Neuroscience - Machine Learning (Systems Identification & Reinforcement Learning) * Strong Matlab programming skills required, Python and C++ programming experience preferred. * For the Staff Scientist position, applicants must have a minimum of three (3) years of relevant postdoctoral experience. Please forward CV, cover letter and 2 references to CBEM(a)northwell.edu, with the subject line "Post-Doc / Research Scientist in the Neural Decoding and Data Analytics Lab". Theodoros Zanos, PhD Asst Investigator Neural Decoding and Data Analytics Lab Center for Bioelectronic Medicine The Feinstein Institute for Medical Research 350 Community Drive Manhasset, NY 11030 Tel: (516) 562-1204 Cell: (646) 943-3440 Email: tzanos(a)northwell.edu<mailto:tzanos@northwell.edu> Northwell Health Visit us at Northwell.edu<http://northwell.edu/> [cid:image001.png@01D203AA.333A0610] The information contained in this electronic e-mail transmission and any attachments are intended only for the use of the individual or entity to whom or to which it is addressed, and may contain information that is privileged, confidential and exempt from disclosure under applicable law. If the reader of this communication is not the intended recipient, or the employee or agent responsible for delivering this communication to the intended recipient, you are hereby notified that any dissemination, distribution, copying or disclosure of this communication and any attachment is strictly prohibited. If you have received this transmission in error, please notify the sender immediately by telephone and electronic mail, and delete the original communication and any attachment from any computer, server or other electronic recording or storage device or medium. Receipt by anyone other than the intended recipient is not a waiver of any attorney-client, physician-patient or other privilege.

Aug. 31, 2016

SfN2016 Satellite Symposium "Collaborative Neuroscience and Enabling Infrastructure"

by emuller

ANNOUNCEMENT Human Brain Project Satellite Symposium to SfN 2016 "Collaborative Neuroscience and Enabling Infrastructure" When: 1pm-5pm, November 11th, 2016 Where: Manchester Grand Hyatt San Diego, Room: Cortez Hill ABC Organizers: Marc-Oliver Gewaltig, Eilif Muller, Jeff Muller, David Lester, Andrew Davison Participants are kindly asked to register using the following link (google forms): https://goo.gl/forms/0uuu4rW5yW3epgNm2 OVERVIEW The EU funded Human Brain Project is developing six research platforms in the areas of Neuroinformatics, High-Performance Computing, Brain Simulation, Medical Informatics, Neuromorphic Computing and Neurorobotics to support international research. This symposium brings together researchers and engineers from the Human Brain Project (HBP) with the larger neuroscience community to discuss how the HBP Platforms can catalyze collaborative neuroscience research by the community, and highlight selected complementary initiatives to explore synergies. We will provide an introduction to the Human Brain Project platforms, "The HBP Collaboratory", with a focus on neuroscientific use-cases available as of the initial public release of spring 2016, and first success stories. For further details see the website: https://www.humanbrainproject.eu/sfn-2016-satellite

Aug. 31, 2016

University of Surrey: Professorial appointment in the Nature Inspired Computing and Engineering Group

by a.gruning＠surrey.ac.uk

Dear Colleagues, the University of Surrey has a job opening for a professorship, see the details below or at http://jobs.surrey.ac.uk/060916 Best, Andre The University of Surrey is an international university with a world-class research profile and an enterprising spirit. The University has an outstanding record in student employment and teaching excellence. The Department of Computer Science embodies the ethos of “applying theory into practice” across its research and teaching activities. The Department of Computer Science within the Faculty of Engineering and Physical Sciences has an international reputation for research and teaching. Research in the department is focussed on two main areas - Nature Inspired Computing and Engineering (NICE), and Secure Systems, with Surrey hosting one of only 13 Academic Centres of Excellence recognised by GCHQ. This post offers an exciting opportunity for a Professorial appointment in the Nature Inspired Computing and Engineering group. The vision of the group is to better human life and the environment by understanding and simulating how nature works. The successful candidate will provide leadership in research in machine learning at the highest level and develop strategic partnerships. We welcome applications from both academia and industry. We are open to a variety of machine learning and cognitive systems specialisms that are related to, or complement current strengths of the group including (but not limited to): computational intelligence, computational neuroscience, with applications to data-driven engineering optimisation, self-organising and autonomous systems, health care and bioinformatics. It is expected that the post-holder will also contribute to high quality teaching at undergraduate and post-graduate level, for example in data science. The initial focus of the post is working as part of the senior team to drive forward machine learning research within the Department, across the University and internationally with academia and industry. The Department has excellent links with Honda, The Pirbright Institute and Moorfields Hospital. It offers the unique opportunity to grow interdisciplinary research within Surrey, for example with the Faculty of Health and Medical Sciences involving the Surrey Sleep Research Centre and within the Faculty of Engineering and Physical Sciences which has expertise in machine learning across several of its Departments and research centres. The Department is implementing a strong growth plan which has seen its academic staff base increase by over 35% in the last year, with a focus on security. The Department has now prioritised future growth in the area of machine learning research and immediately after the appointment to this Chair the Department intends to appoint a further faculty member at Lecturer level alongside this post. For an informal discussion about the positions, please contact the Head of Department of Computer Science, Dr Helen Treharne on h.treharne(a)surrey.ac.uk or Professor Paul Krause, Director of Research, on p.krause(a)surrey.ac.uk. A search exercise is being undertaken by Society who will support the University Panel decision to identify the widest possible field of candidates and assist in their assessment. For further details, including job description, person specification and information on how to apply, please contact www.society-search.com quoting reference 0475 or to discuss the position further contact Nina Patel on +(0) 44 20 36530479 The closing date is 3rd October 2016 at 5pm (GMT). Interviews will be held in on 19th and 20th October, in Guildford. Presentations will be given on the afternoon of 19th October 2016 and the interviews will follow on the 20th October, 2016. It is expected that candidates will participate on both days. The start date is anticipated to be April 2017 (or earlier). Visits to Guildford and to the Department can be arranged for short-listed candidates, in advance of the interview date. The University is committed to building a culturally diverse organisation and strongly encourages applications from female and minority candidates. -- Dr Andre Gruning Senior Lecturer (Associate Professor) Department of Computer Science University of Surrey, Guildford GU2 7XH United Kingdom

Aug. 31, 2016

Workshop in Brisbane, Nov 28-30

by Leonardo Gollo

Dear all, It is a pleasure to announce the 9th Australasian Workshop on Neuro-Engineering and Computational Neuroscience that will be held in Brisbane, Australia, November 28-30. The workshop will bring together researchers at the interface between neuroscience, physics, engineering and psychiatry. Abstract submissions are closing on the 5th of September and there are limited places for the short course on Deep Learning. Topics include: - Theoretical, Mathematical & Computational Neuroscience - Computational Psychiatry - Neuroimaging - Connectomics & Networks - M/EEG & Electrophysiology - Neural Modeling & Engineering - Neuromorphic Engineering - Neuroprosthetics & Brain Machine Interfaces - Neural Information Processing - Neuroinformatics - Cognitive Neuroscience - Systems Neuroscience - Neurostimulation Keynote speakers: - Xiao-Jing Wang, New York University - Rosalyn Moran, University of Bristol - James Rowe, University of Cambridge Additional invited speakers: TBA. Abstract submission: http://conference.qimrberghofer.edu.au/page/NeuroEng/ Kind regards, Leonardo L Gollo, James Roberts, Vinh Nguyen, Michael Breakspear

Aug. 30, 2016

Neuroimaging engineer position

by paulo rodrigues

Hi all, We are looking for an experienced and motivated neuroimaging engineer/scientist to start asap. Please send your CV/motivation to team(a)mint-labs.com You are experienced in volumetric, diffusion, rs-fMRI studies, and are not shy about Python, bash, R or whatever tool fits the work? Do you know the plethora of tools like mrtrix, ANTs, freesurfer, dipy, nipype, ...? The challenge is to develop analysis systems for multidimensional medical datasets. Mint Labs is a cloud computing platform that focus on integrating diverse clinical, imaging, genomic, and other data to better evaluate disease progression and response to interventions. You will start a new project focusing on using these methods to answer some pertinent questions in MR. You thrive in developing pipelines to process imaging data, and integrate multiple data points into meaningful group conclusions? Objectives of the position -------------------------- The position hinges on building sophisticated processing pipelines for neuroimaging datasets. Building, improving advanced morphometrics and brain-parcellation techniques in structural MRI, dMRI, rs-fMRI. Support the interaction with several external research partners and clients to develop neuroimaging analysis. About Mint Labs -------------------------- Mint Labs is a Barcelona based startup building a neuroimaging data analytics cloud-based platform. The system employs software tools to integrate thousands of images and data from a patient and creates a specific detailed 3D map of the brain. We can quantify the effect of the treatment in the damage of the brain and characterise patients for clinical trials. The images are directly sent from the scanners to our servers, and there the data is automatically processed and analysed.

Aug. 29, 2016

Job offer in computational neuroscience

by Irene Yujnovsky

Hi! we currently have an open post-doctoral position for a neuroinformatician in Marseille, France. You will find the ad below, feel free to diffuse it to potentially interested candidates: *Neuro**informatician/Mathematical modeler* *TNG Team, **Institute of System**Neuroscience (INS**), Marseille, FRANCE***** A post-doctoral position is open in the Theoretical Neurosciences Group (TNG) <http://ins.univ-amu.fr/research-teams/theoretical-neurosciences-group/>directed by Viktor JIRSA at the Institute of System Neuroscience (INS) for an experienced computational neuroscientist to work in modeling brain networks with the aim of creating individual Virtual Patient dementia models using The Virtual Brain platform as framework (see http://www.thevirtualbrain.org) This research project will be conducted in the context of the Aetionomy European consortium (IMI). *Qualification* Candidates must be highly motivated to work on an interdisciplinary project and collaborate with the various members of the consortium. They should have a PhD degree in computational neuroscience, mathematical modeling or equivalent level of knowledge. A strong background in data fitting (Bayesian approaches, Dynamical Causal Modeling (DCM), Monte Carlo techniques) will be highly appreciated. Candidates must be comfortable working in computational environmentsand possess excellent programming skills. Experience with The Virtual Brain platform would be considered an advantage. *The Theoretical Neuroscience group* We are a multi-national team interested in understanding the mechanisms underlying the spatiotemporal organization of large-scale brain networks. Our work comprises mathematical and computational modeling of large-scale network dynamics and human brain imaging data, the development of neuroinformatics tools for studying large-scale brain networks applied to concrete functions, dysfunctions (epilepsy, dementia) and aging. *Terms of salary and employment* A 12-month renewable contract will be established. Salary will depend on the diploma and experience. Operating language in the laboratory is English. Applications including a cover letter, curriculum vitae and the names of two referees should be sent by September 30^th 2016 to: *Dr. Irene Yujnovsky* at irene.yujnovsky(a)univ-amu.frMore information about the INS and the Theoretical Neurosciences Group can be found at: http://bit.ly/29kub1k Thank you very much, Irene Yujnovsky -- --------------------------------------------------- Irene Yujnovsky, PhD Chef de projet EPINEXT Institut de Neurosciences des Systèmes Inserm UMR1106 Université Aix-Marseille Faculté de Médecine, 27, Boulevard Jean Moulin 13005 Marseille, France Phone: +33 (0)491324239 email: irene.yujnovsky(a)univ-amu.fr Website: http://epinext.org/

Aug. 26, 2016