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Open Source Brain workshop 2019: Call for presentations/demos of open datasets and tools

by Gleeson, Padraig

[Apologies if you receive multiple copies of this due to cross-posting] The 2019 Open Source Brain workshop will be held in Alghero, Sardinia on 9-11th September 2019. There are a number of presentation slots still available for attendees to present open experimental data sets/databases/tools/simulators/libraries relevant to the goals of the meeting. Full details: http://www.opensourcebrain.org/docs/Help/Meetings#OSB_2019 Open Source Brain (http://www.opensourcebrain.org) is a platform for sharing and collaboratively developing models in computational neuroscience. Models of cells and circuits in standardised formats can be visualised, analysed and simulated through a standard web browser. A key driver for the development of this technology is to improve accessibility, scientific scrutiny, reproducibility and reuse of models of brain function. The platform is described in a recent paper in Neuron: https://www.cell.com/neuron/fulltext/S0896-6273(19)30444-1 The 2019 OSB Workshop will highlight the latest features of OSB and engage current and future users of the platform through invited talks, posters, hands on demonstrations, and user presentations. Since we are substantially expanding the functionality of Open Source Brain to enable sharing of standardized experimental data used to build and test the models of neurons and circuits, this year’s meeting will have two key themes: 1) Accessible sharing of cellular neuroscience data Through support for the Neurodata Without Borders (NWB) format, OSB will facilitate sharing of multiple types of experimental data used to constrain computational models, including electrophysiological recordings, Ca2+ fluorescence imaging, 2D, 3D and 4D imaging and behavioural data. Challenges, requirements and solutions to data standardization will be discussed. 2) Modelling cortical structures across scales Cortical networks are modelled at many scales from abstract representations of interacting populations (neural masses) to networks of biophysically and morphologically detailed cell models. NeuroML is being expanded to cover a greater range of these models, which will allow them to be shared and simulated on OSB, facilitating comparison of models and ideas between researchers. This ongoing work is taking place as part of the SIG on Standardised Representations of Network Structures<https://www.incf.org/activities/standards-and-best-practices/incf-special-i…>. Registration The registration fee for the meeting for 3 days will be £130. This will help cover organisation and speaker costs, meeting room hire, lunch, tea and coffee for 3 days and one workshop dinner. Please register here<https://onlinestore.ucl.ac.uk/conferences-and-events/faculty-of-life-scienc…>. Registration closes on 1st September 2019. Confirmed speakers Yazan Billeh (Allen Institute, USA) Matteo Cantarelli (MetaCell Ltd) Alex Cayco Gajic (UCL, UK & École Normale Supérieure, France) Sharon Crook (Arizona State University, USA) Jeffrey S. Diamond (NINDS, USA) Ian Duguid (University of Edinburgh, UK) Matt Earnshaw (University College London, UK) Jan Fousek (Aix Marseille Université, France) Padraig Gleeson (University College London, UK) Boris Marin (Universidade Federal do ABC, Brazil) Diego Restrepo (University of Colorado, USA) Oliver Reubel (Lawrence Berkeley National Lab, USA) Simon Schultz (Imperial College, UK) Angus Silver (University College London, UK) Sacha van Albada (Jülich Research Centre, Germany) For more details please see: http://www.opensourcebrain.org/docs/Help/Meetings#OSB_2019 The OSB 2019 organising committee Padraig Gleeson Matt Earnshaw Angus Silver

Aug. 7, 2019

Registration open for #ABC2019 & #MARR2019 | CAMBRIDGE | 11-13 SEPT 2019

by Máté Lengyel

<http://www.neuroscience.cam.ac.uk/events/ABC2019/> #ABC2019 & #MARR2019 | CAMBRIDGE | 11-13 SEPT 2019 <http://www.neuroscience.cam.ac.uk/events/ABC2019/> Cambridge Neuroscience invites you to #ABC2019 & #MARR2019 Updated programmes now online! THE 7TH CAMBRIDGE NEUROSCIENCE SYMPOSIUM ‘ARTIFICIAL AND BIOLOGICAL COGNITION’ IS AN INTERNATIONAL MEETING, WHICH WILL TAKE PLACE ON SEPTEMBER 12-13TH 2019 AT THE WEST ROAD CONCERT HALL AT THE UNIVERSITY OF CAMBRIDGE. Abstract submission extended until August 16th 2019! #ABC2019 <http://www.neuroscience.cam.ac.uk/events/ABC2019/> comprises seven sessions including ‘Reinforcement Learning’, ‘Navigation’, ‘Robotics’, ‘Communication’, ‘Vision’ ‘Mental Health’ and ‘Neuroethics of AI’. The programme features many distinguished national and international speakers. This is generally a very popular meeting, which attracts an international audience of up to 500 delegates. The Alan Hodgkin and Andrew Huxley plenary lectures are a major feature within the programme. We are delighted to welcome Demis Hassabis and Catherine Dulac to Cambridge. In addition to all of the refreshment breaks there are additional fun opportunities to network at a drinks reception, followed by a Gala dinner, at Trinity College in the evening on September 12th 2019; and a drinks reception following the close of the symposium on September 13th. #Marr2019 <http://www.neuroscience.cam.ac.uk/events/ABC2019/pages/about-marr.html>: In addition, we are hosting a special satellite meeting to celebrate David Marr, one of the founding fathers of computational neuroscience, on the 50th anniversary of his thesis. Come join us at St John’s College on Wednesday 11th September 2019 for ‘David Marr, 50 years on’. We will be raising a glass to David Marr on the stunning rooftop terrace of Newnham College following the meeting. <http://www.neuroscience.cam.ac.uk/events/ABC2019/> <http://www.neuroscience.cam.ac.uk/events/ABC2019/pages/abc-programme.html> <http://www.neuroscience.cam.ac.uk/events/ABC2019/pages/marr-programme.html> <http://www.neuroscience.cam.ac.uk/events/ABC2019/pages/registration.html> Contact: coordinator(a)neuroscience.cam.ac.uk <mailto:coordinator@neuroscience.cam.ac.uk> Follow us on Twitter: https://twitter.com/CamNeuro <https://twitter.com/CamNeuro> Cambridge Neuroscience: https://www.neuroscience.cam.ac.uk/ <mailto:coordinator@neuroscience.cam.ac.uk> -- Dr Dervila Glynn Cambridge Neuroscience IRC Coordinator Room 402, Department of Pharmacology, University of Cambridge, Tennis Court Road, Cambridge, CB2 1PD, United Kingdom Email: coordinator(a)neuroscience.cam.ac.uk <mailto:coordinator@neuroscience.cam.ac.uk> Phone: 00 44 (0)1223 334063 Web: http://www.neuroscience.cam.ac.uk/ <http://www.neuroscience.cam.ac.uk/> Join the conversation on @CamNeuro <https://twitter.com/CamNeuro>

Aug. 6, 2019

Postdoc and PhD student position using EEG & neural networks to investigate language (Potsdam, Germany)

by Milena Rabovsky

Dear colleagues, I am looking for a Postdoc and a PhD student to join my newly established Cognitive Neurosciences Lab at the University of Potsdam (Germany) as described in more detail below, and would be very grateful if you forward this announcement to potentially interested candidates. Many thanks and best wishes, Milena Rabovsky --------------------------------------- Cognitive Neurosciences Lab at the University of Potsdam Postdoctoral and PhD student position The newly established Cognitive Neurosciences Lab at the University of Potsdam (PI Milena Rabovsky) is looking for a Postdoc to focus on neural network modeling of brain potentials during sentence comprehension and a PhD student to investigate prediction and adaptation during language comprehension using EEG. The positions are funded by an Emmy Noether grant from the German Research Foundation focused on investigating the processing of language and meaning in the brain using EEG and deep neural network models (see e.g., Rabovsky, Hansen, & McClelland, 2018, Nature Human Behaviour). Preferred starting date for both positions is November 1, 2019 (but can be discussed). Postdoc position The salary and benefits are determined by the collective bargaining agreement for public employees in Germany (TV-L 13 Ost, 100%). This is a temporary position initially limited to a term of 24 months (with possible extension). Project and responsibilities The goal of this project is to train a neural network model of sentence comprehension that has been successfully used to simulate language related brain potentials (Rabovsky, Hansen, & McClelland, 2018, Nature Human Behaviour) on a large-scale semantically labeled training corpus. Prospectively, the trained model will allow for (in collaborations with others in the lab) the simulation of language related brain potentials using stimulus materials from empirical experiments, and the comparison of representations in the model with representations in the brain via representational similarity analysis. Requirements - very good Master and PhD in relevant field (Cognitive Sciences, Computer Science, Computational Linguistics, Machine Learning, Data Science, Computational Neuroscience, etc.) - excellent computational skills (e.g., MATLAB, Python,…) - deep learning/ deep neural network modeling skills - capacity to work independently - excellent writing, communication, and presentation skills (in English) - strong interest in several aspects of the lab’s research focus, i.e., neural network models, cognitive neurosciences, language, meaning - high motivation and commitment In addition, the ideal candidate has - experience with deep neural network language models - excellent track record in a relevant field PhD student position The salary and benefits are determined by the collective bargaining agreement for public employees in Germany (TV-L 13 Ost, 65%; please note that 65% of full staff member positions are the current norm for PhD student positions in Germany). This is a temporary position initially limited to a term of 36 months (with possible extension). Project and responsibilities The goal of this project is to investigate the relation between prediction errors and adaptation/ learning during language comprehension, as reflected in event-related brain potentials (ERPs). Specific tasks include designing and programming the experiments, collecting and analyzing the data (behavioral and EEG), interpretation of the results as well as presentation of the results at international conferences and publication of the results in international peer-reviewed journals. Requirements - very good Master in relevant field (Cognitive Sciences, Cognitive Neurosciences, Psychology, etc.) - experience with and interest in neuroscientific methods (preferably EEG) - solid statistical skills - good programming skills (e.e., MATLAB, Python, R,…) - excellent writing, communication, and presentation skills (in English) - strong interest in several aspects of the lab’s research focus, i.e., cognitive neurosciences, prediction, adaptation, language, meaning, event-related brain potentials - high motivation and commitment In addition, the ideal candidate has - excellent skills in advanced statistical analyses - experience in research on language, prediction and/ or implicit memory The University strives to maintain gender balance among its staff. Severely disabled applicants shall receive preference in case of equal qualifications. We expressly invite applications from people with migration backgrounds. Please send your application (including letter of motivation, CV, at least 1 [PhD position] or 2 [Postdoc position] names of potential referees, copies of academic certificates) as a single pdf file to bewerbung(a)uni-potsdam.de until August 31 for full consideration (late applications may be considered until the position is filled). Please direct informal inquiries to Milena Rabovsky at milena.rabovsky(a)gmail.com. The official ads can be downloaded here (there are some aspects that relate to German laws and may be confusing for potential international applicants - please get in touch if you have questions!) Postdoc position: https://www.uni-potsdam.de/fileadmin01/projects/verwaltung/docs/Dezernat3/A… PhD student position: https://www.uni-potsdam.de/fileadmin01/projects/verwaltung/docs/Dezernat3/A…

Aug. 5, 2019

Job Opening: Research Assistant Professor in Data Science and Engineering at Hong Kong Baptist University

by COMP HKBU

The Department of Computer Science at Hong Kong Baptist University, presently offering BSc, MSc, MPhil, and PhD programmes, invites outstanding applicants for the following position. *Research Assistant Professor in Data Science and Engineering (PR0059/19-20)* The Research Assistant Professor position is created and funded as part of the strategic research development initiatives in the Department. The appointee will be provided with a conducive research environment, and will work within an established group of faculty in the Department. He/she is also expected to perform group-based high-impact research and to undertake some teaching duties. Applicants should possess a PhD degree in Computer Science, Computer Engineering, Information Systems, or a related field, and demonstrate abilities to conduct high-quality research in one of the following areas: (i) data analytics and information management; (ii) data security and privacy. Initial appointment will be made on a fixed-term contract of two to three years. Re-appointment thereafter will be subject to mutual agreement. For enquiry, please contact Prof Jianliang Xu (email: xujl(a)comp.hkbu.edu.hk. More information about the Department can be found on its website ( http://www.comp.hkbu.edu.hk) *Salary will be commensurate with qualifications and experience.* *Application Procedure:* Applicants are invited to submit their applications at the HKBU e-Recruitment System (jobs.hkbu.edu.hk) with samples of publications, preferably three best ones out of their most recent publications/works. Applicants should also request two referees to send in confidential letters of reference, with *PR* number (stated above) quoted on the letters, to the Personnel Office (Email: recruit(a)hkbu.edu.hk) direct. Those who are not invited for interview four months after the closing date may consider their applications unsuccessful. All application materials including publication samples, scholarly/creative works will be disposed of after completion of the recruitment exercise. Details of the University's Personal Information Collection Statement can be found at http://pers.hkbu.edu.hk/pics. The University reserves the right not to make an appointment for the post advertised, and the appointment will be made according to the terms and conditions then applicable at the time of offer. *Closing date: 30 August 2019 (or until the position is filled)* URL: https://www.comp.hkbu.edu.hk/v1/?page=job_vacancies&id=532

Aug. 5, 2019

Lab manager position available in in the Max Planck Institute in Tuebingen Germany

by Zhaoping Li

*The Department for Sensory and Sensorimotor Systems of the **Max-Planck-Institute for Biological **Cybernetics*studies the processing of sensory information (visual, auditory, tactile, olfactoy) in the brain and the use of this information for directing body movements and making cognitive decisions. Theresearch is highly interdisciplinary, and usestheoretical and experimental approaches, including human psychophysics, and animal behavior, imaging, electrophysiology, and computational modelling. Department website:_https://www.kyb.tuebingen.mpg.de/sensory-and-sensorimotor-systems_ We are currently looking for a *Lab Manager (m/f/d) 100%* to join us at the next possible opportunity. *Responsibilities* You will support, coordinate, and/or manage * scientific equipment and purchases * IT/programming * website, wiki, and social media content * general administrative processes at the department * project planning and managing deadlines * internal and external workshops and other events *Requirements* * Completed university degree (Master’s level) in natural sciences (Mathematics, Computer Science, Physics, Biology or a similar field), ideally a PhD * Strong command of both English and German**(at least C1 level) * Good skills in IT/programming * The willingness and capability to learn about the research topics * Very strong management and organizational skills * Team player * Independent and responsible * A high level of resilience and professionalism *We offer:* We offer highly interesting, challenging and varied tasks; you will work closely and collaboratively with scientists, students, programmers, administrative staff, and IT support to help achieve the scientific goals of the department. A dedicated team awaits you in an international environment with regular opportunities for further education and training. The salary is paid in accordance with the collective agreement for the public sector (TVoeD Bund), according to your qualifications. This position is initially limited to two years, with the possibility of a permanent contract. The Max-Planck-Society seeks to employ more handicapped people and strongly encourages them to apply. Furthermore, we actively support the compatibility of work and family life. The Max-Planck-Society also seeks to increase the number of women in leadership positions and strongly encourages qualified women to apply. The Max-Planck-Society strives for gender equality and diversity. *Your application* Your application must contain a cover letter, a curriculum vitae, and relevant certificates. Please note that incomplete applications will not be considered. The position is available immediately and will be open until filled. Preference will be given to applications received by *August 31, 2019. *We look forward to receiving your online application by E-Mail in PDF format (in one file) to:_lizhaopinglab@tuebingen.mpg.de <mailto:lizhaopinglab@tuebingen.mpg.de>_, where also informal inquiries can be addressed.

Aug. 3, 2019

Postdoc position in modeling in vivo dendritic activity of cortical pyramidal neurons

by Erik De Schutter

The Computational Neuroscience Unit (https://groups.oist.jp/cnu) of Prof. Erik De Schutter at the Okinawa Institute of Science and Technology (OIST) is starting a project on modeling behaviorally relevant dendritic activity in layer 5 cortical pyramidal neurons. This will be a collaboration with Prof. Wen-Biao Gan at the New York University School of Medicine (https://med.nyu.edu/faculty/wenbiao-gan) who will provide in vivo data to constrain the models. The goal is to build quantitative models that capture how synaptic input drives dendritic calcium spiking in the apical tuft, how this activity is transmitted down the apical dendrite and changes somatic output as demonstrated, for example, in Cichon and Gan, Nature 2015. Candidates should have a PhD in (computational) neuroscience with good knowledge of dendritic physiology and experience in using the NEURON software to simulate compartmental models of neurons. Previous experience in modeling pyramidal neurons is a plus but not required. OIST is a young, fast-growing research-oriented interdisciplinary graduate university, located on the subtropical paradise island of Okinawa (https://www.visitokinawa.jp/) Despite being a newcomer in the academic world, OIST was recently ranked as #10 in the world on the Normalized Nature Index (https://www.natureindex.com/annual-tables/2019/institution/academic-normali…) It offers attractive financial and working conditions in an English language graduate university. Starting date any time before begin 2020. Send curriculum vitae, summary of research interests and experience, and the names of three referees to Prof. Erik De Schutter at erik(a)oist.jp

Aug. 3, 2019

Fwd: [Job][Postdoc]: 4yrs senior researcher position and Phd scholarship on Modelling beliefs dynamics of social media users with machine learning methodologies at University of Essex funded by VolkswagenStiftung (Volkswagen Foundation)

by Dimitri Ognibene

** Apologies for cross-postings ** Dear Colleagues, I would be very grateful if you could forward this job advert to anybody who could be interested. The highlight is on machine learning for user interaction modelling. Here are some information for the positions. ** Application deadline 14th of August** To apply https://vacancies.essex.ac.uk/tlive_webrecruitment/wrd/run/ETREC107GF.open?… <https://vacancies.essex.ac.uk/tlive_webrecruitment/wrd/run/ETREC107GF.open?…> https://www.jobs.ac.uk/job/BTV423/senior-research-officer-in-social-media-m… <https://www.jobs.ac.uk/job/BTV423/senior-research-officer-in-social-media-m…> A PhD scholarship on the same topics is also out with deadline on the 30th of August Check <http://sites.google.com/site/dimitriognibenehomepage/jobs>http://sites.google.com/site/dimitriognibenehomepage/ <http://sites.google.com/site/dimitriognibenehomepage/>jobs Kind regards, Dimitri *Postdoc and Phd Positions in: Modelling beliefs dynamics of social media users with machine learning methodologies at University of Essex funded by VolkswagenStiftung (Volkswagen Foundation)* Project: Courage Applications are invited for a 4 years position of Senior Postdoctoral Research Officer and a PhD shcolarship on ht project “COURAGE: A Social Media Companion Safeguarding and Educating Students”. This project is an international collaboration funded by VolkswagenStiftung (Volkswagen Foundation) as part of the Artificial Intelligence and the Society of the Future funding initiative. The project partners include the Universitat Pompeu Fabra (Spain), the Istituto per le Tecnologie Didattiche of the National Council of Research ITD-CNR (Italy), Hochschule Ruhr West (Germany) and the Rhine-Ruhr Institute for System Innovation (Germany). The project aims to develop a Virtual Social Media Companion that educates and supports teenage school students facing the threats of social media such as discrimination and biases as well as hate speech, bullying, fake news and other toxic content. The project involves a substantial experimentation aspect in collaboration with multiple schools around Europe. It will thus provide a unique chance to perform interventions to test the validity of social interaction theories and governance methods. The Essex team will drive two strands of this work, the machine-learning-based user beliefs dynamics modelling aspect and the process of analysing visual and textual content. More specifically, we aim at developing Bayesian computational models of beliefs dynamics of social media users to support governance and educational strategies. These models will also be applied to evaluate socially relevant variables, such as trust and inclusion. We will build on and implement state-of-the-art CV, NLP & AI methods to provide measurements of sentiment, bias, hatefulness, veracity, polarization, and sensationalism of social media content. In addition, we will drive forward the state of the art in detecting hate speech and biased content. The companion will actively counteract this kind of content, balancing it with opposite perspectives and proposing specifically themed challenges adopting ideas used in games. The successful candidate will be based in the School of Computer Science and Electronic Engineering at Colchester Campus of The University of Essex. The post is available for four years with a start date from September 2019. To apply: https://vacancies.essex.ac.uk/tlive_webrecruitment/wrd/run/ETREC107GF.open?… <https://www.google.com/url?q=https%3A%2F%2Fwww.jobs.ac.uk%2Fjob%2FBSW396%2F…> For more information: https://sites.google.com/site/dimitriognibenehomepage/jobs?authuser=0 <https://sites.google.com/site/dimitriognibenehomepage/jobs?authuser=0> Applicants are encouraged to contact Dr. Dimitri Ognibene <mailto:dimitri.ognibene@essex.ac.uk> (dimitri.ognibene(a)essex.ac.uk <mailto:dimitri.ognibene@essex.ac.uk>) for informal enquiries and further information on research objectives. -- Dimitri Ognibene, PhD Lecturer in Computer Science and Artificial Intelligence Department of Computer Science and Electronic Engineering, University of Essex, UK http://sites.google.com/site/dimitriognibenehomepage/ <http://sites.google.com/site/dimitriognibenehomepage/> Skype: dimitri.ognibene

Aug. 1, 2019

Postdoctoral fellowships at the Neuromathematics Center in Sao Paulo State, Brazil

by Antonio Roque

*Positions for Postdoctoral Researchers* The Research, Innovation and Dissemination Center for Neuromathematics (NeuroMat), hosted by the University of São Paulo, Brazil, and funded by the São Paulo Research Foundation (FAPESP), is offering two post-doctoral fellowships for recent PhDs with outstanding research potential. The research will involve collaborations with experimental and theoretical groups and laboratories associated to NeuroMat. The research to be developed by the post-doc fellows shall be strictly related to ongoing research lines developed by the NeuroMat team. The project may be developed at USP (main campus, São Paulo), USP campus Ribeirão Preto or University of Campinas (UNICAMP). We seek candidates capable of developing independent research in one of the research lines below. 1. Stochastic and/or computational modeling of the brain functioning; 2. Acquisition, processing and quantitative analysis of electrophysiological data; 3. Biomedical devices for neuroscience research. Candidates to the first research line are required to have at least one of the profiles below: - A strong background in probability theory with emphasis on stochastic processes. Previous knowledge of rigorous statistical mechanics or random graphs will be favorably considered; - A strong mathematical and / or computational background and experience with computers and programming. Previous experience with development and / or simulation of neural brain models, complex networks, and parallel computing will be favorably considered. Candidates to the second research line are required to have at least one of the profiles below: - A strong background in neuroscience with previous experience in neurophysiological data acquisition, processing and analysis, and knowledge of computer programming; - A strong background in computer science with experience in the development of algorithms, software tools and data bases. Previous research experience in neuroscience or related areas will be favorably considered. Candidates to the third research line are required to have at least one of the profiles below: - A strong background in electromagnetism and biomedical engineering. Previous knowledge of transcranial magnetic stimulation or magnetic / electric field simulation will be favorably considered; - A strong background in computer science and control software development expertise. Previous experience with neuroscience and neuronavigation systems will be favorably considered. Previous experience with multidisciplinary research teams is welcome for all the above research lines. The initial appointment is for one year, with a possible extension to up to four years, conditional on research progress. The fellowship is competitive at international level, and fellows benefit from extra funds for travel and research expenses plus limited support for relocation expenses. *Application Instructions* Applicants should complete and submit the application form. The following documents and information are requested (please see the form for further details): - Summary of the CV, in the FAPESP format (see www.fapesp.br/en/6351 for instructions); - List of publications, with links to those available online; - A summary of the research plan for the next year, up to 5 pages length. It should explicitly state for which of the three above profiles the candidate is applying. It should also address its place within the framework of the NeuroMat research program. - Pointers to other research-related output, such as software, web pages. Candidates should be willing to send copies of publications, if requested; - Any further information deemed relevant to the application. In addition to the above, we require at least 2 recommendation letters. Those should be mailed by the recommenders directly to postdoc-appl(a)numec.prp.usp.br. *FAPESP requirements* a. The candidate should have concluded a doctorate less than seven years before the beginning of the PD fellowship. b. The fellowship demands full-time dedication to the research project (except under conditions outlined in resolution PR No 13/2009, 15 July 2009). c. The fellowship holder may not hold any formal or informal employment nor receive, during the term of the fellowship, a fellowship from another entity, salary or remuneration deriving from the exercise of activities of whatever nature (except under conditions outlined in the decree PR No 13/2009, 15 July 2009). For more information about the scholarships see http://www.fapesp.br/bolsas/pd. *Timetable* Candidates are encouraged to apply at their earliest convenience until August 27, 2019. Appointments are expected to start by October 1st, 2019. The initial period of the position lasts for 12 months, with possible renovations for up to four years. This opportunity is open to candidates of any nationality. The selected candidates will be awarded FAPESP Post-Doctoral fellowships in the amount of R$ 7,373.10 monthly and a research contingency fund, equivalent to 15% of the annual value of the fellowship, which should be spent in items directly related to the research activity. Check the rules of FAPESP post-doctoral fellowships at: http://www.fapesp.br/en/5427. -- Dr. Antonio C. Roque Professor Associado Departamento de Fisica FFCLRP, Universidade de Sao Paulo 14040-901 Ribeirao Preto-SP Brazil - Brasil E-mails: antonior(a)usp.br <antonior(a)ffclrp.usp.br> aroquesilva(a)gmail.com URL: www.sisne.org Tels: +55 16 3315-3768 <+55%2016%203315-3768> (sala/office); +55 16 3315-3859 <+55%2016%203315-3859> (lab) FAX: +55 16 3315-4887 <+55%2016%203315-4887>

Aug. 1, 2019

Recent research article

by Osva Velarde

Dear Colleagues, We are happy to share with you our work about the mechanisms of phase-amplitude cross frequency coupling (PAC) in models of biologically plausible neural networks. We think this work opens a new and valuable connection between theory of dynamical systems and the field of signal processing in neural networks and other biophysical systems. In particular, one of the proposed tools, the Time Locked Index (TLI), is suitable to efficiently quantify the harmonic content of experimental recordings. Hope you find this useful. Feedback is most welcome. "Bifurcation structure determines different phase-amplitude coupling patterns in the activity of biologically plausible neural networks" O M Velarde, E Urdapilleta, G Mato, and D Dellavale. NeuroImage https://doi.org/10.1016/j.neuroimage.2019.116031 The paper is freely available at: https://www.researchgate.net/publication/334582958_Bifurcation_structure_de… Source code for TLI computation:https://github.com/damian-dellavale/Time-Locked-Index With kind regards, Osvaldo Matías Velarde Departamento de Física Médica Instituto Balseiro - Centro Atómico Bariloche R8402AGP Bariloche, Río Negro, Argentinaosva_velarde@yahoo.com.arosva.m.velarde@gmail.com https://fisica.cab.cnea.gov.ar/fisicamedica/

July 31, 2019

Opening for Group Leader of Bio Data Science group

by Romuald Janik

Dear Colleagues, Starting from Fall 2019, the Jagiellonian University in Krakow, Poland will host a 4-year interdisciplinary project Bio-Inspired Artificial Neural Networks The broad aim of the project is to put together Neuroscience and Machine Learning research and gather insight from the brain analyzed over a wide range of scales in order to develop novel machine learning architectures and algorithms. The project comprises Machine Learning, Cognitive and Physics groups and in addition three new groups will be formed: a low level neuroscience group, a Bio Data Science group and a more technical computer science group. We are looking in particular for candidates for a Group Leader of the Bio Data Science group. The main aims of the Bio Data Science group located at the Faculty of Physics is to perform extensive analyses of massive fMRI data (both in-house and publicly available), possibly also of other modalities like diffusive MRI or MEG/EEG. These analyses will be targeted at i) developing machine learning based diagnostic algorithms, ii) extracting insights from data on connectivity/dynamical properties of neuronal networks, iii) comparisons with artificial neural networks. In addition, the group is expected to closely cooperate with the Physics group of the project on testing physics motivated hypothesis and implementing machine learning architectures. Of course, the group is very much welcome to pursue also other goals related to the project "Bio-Inspired Artificial Neural Networks". The Leader of the Bio Data Science group should therefore have expertise in machine learning as well as experience/knowledge on dealing with the specific peculiarities of the fMRI datasets like preprocessing requirements/artifacts as well as general knowledge about other modalities. The position is for 3 years. Deadline for application is 23rd August. The call with details is on the website http://bionn.matinf.uj.edu.pl/. If you have any questions feel free to e-mail me (romuald.janik(a)gmail.com) Best regards, Romuald Janik

July 31, 2019