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PhD Projects - ARC Training Centre in Cognitive Computing for Medical Technologies

by David Grayden

Current PhD Project Openings at the ARC Training Centre in Cognitive Computing for Medical Technologies We are seeking Expressions of Interest from potential Graduate Researchers to work on the following PhD projects in Australia. These project are embedded within the Centre, where up to 14 PhD students, 5 post-doctoral researchers, and 11 University of Melbourne staff will collaborate across 4 research streams with researchers at IBM Research and a number of Australian Universities, including The University of Melbourne, RMIT University, the University of South Australia, and Western Sydney University. Each student will be jointly supervised by Universities and IBM Research and will spend at least 12 months of their candidature working on site at an IBM Research laboratory. These positions are supported by a scholarship and a supplemented living stipend of A$34,848 per annum. Projects available: 1. Context-specific clinical decision support leveraging clinical practice guidelines 2. Multi-document summarisation supporting clinical evidence review 3. Seizure forecasting using neural networks 4. Deep learning for fitting neural mass models to EEG 5. Brain-computer interfaces for low-powered mobile/wearable devices 6. Multimodal brain-computer interfaces for augmented reality and virtual reality applications If interested, please visit: http://aimedtech.org.au/phd-openings.html Regards, David Professor David B. Grayden Head of Department Dept of Biomedical Engineering Melbourne School of Engineering The University of Melbourne, Victoria 3010 Australia http://www.bme.unimelb.edu.au | https://www.linkedin.com/in/dgrayden [cid:image001.jpg@01D1F264.94C20650] This email and any attachments may contain personal information or information that is otherwise confidential or the subject of copyright. Any use, disclosure or copying of any part of it is prohibited. The University does not warrant that this email or any attachments are free from viruses or defects. Please check any attachments for viruses and defects before opening them. If this email is received in error please delete it and notify us by return email.

Nov. 7, 2018

One fMRI MVPA Post-Doc (very competitive salary) 5 year position available under an ERC Starting Grant on the organization of object knowledge

by Jorge Almeida

The Proaction Laboratory (Perception and Recognition of Objects and Actions; http://gaius.fpce.uc.pt/pessoais/jorgealmeida/proaction_home.html; Jorge Almeida’s Lab) at the University of Coimbra (www.uc.pt) Portugal is looking for a motivated and bright Post-doctoral researcher to work on an ERC Starting Grant project (ContentMAP) on the neural organization of object knowledge. In this project we will explore how complex information is topographically organized in the brain using fMRI and state of the art analytical techniques, as well as computational approaches, and neuromodulation. Excellent understanding of and experience with fMRI and data analysis is required. Strong programming skills (matlab, python, etc.) are also a requirement. Experience with data analysis techniques using MVPA and other multivariate approaches (e.g., Representation Similarity Analysis). Very good English (oral and written) communicative skills are necessary. The position is for a maximum of 5 years, and will start in February 2019. The position involves no formal teaching (unless the candidate wants to). It does involve, however, lab mentoring. The salary is extremely competitive – between 2200 and 2400 euros per month (dependent on experience), tax free (annual 26400-28800 euros tax free). This value is on par with the average salaries at top American institutions, as well as London, Paris, etc. However, the cost of living in Portugal (and particularly in Coimbra) is much lower. According to Numbeo, 2400 euros would be equivalent to 4850 pounds in London/4800 euros in Paris/6615 USD in Boston/6210 USD in Los Angeles/ 8330 USD in New York). The researcher will work directly with Jorge Almeida in Coimbra, but the laboratory has extensive collaborations with researchers throughout the world. In fact, there may be the option of spending some time in another lab as part of the position. The researcher will also be encouraged to develop her/his own projects and look for additional funding so that the stay can be extended. We have access to a 3T MRI scanner with a 32-channel coil (with EEG inside the scanner), to tDCS with neuronavigation, and to a fully set psychophysics lab. We have EEG and eyetracking on site. We also have access, through other collaborations, to a 7T scanner. Finally, the University of Coimbra is a 700 year old University and has been selected as a UNESCO world Heritage site. Coimbra is one of the most lively university cities in the world, and it is a beautiful city with easy access to the beach and mountain. The deadline for the application is NOVEMBER 20, but you should apply as soon as you can, as we may fill in the positions sooner than the deadline if there are candidates with a superb fit with the requirements and project. The interested candidates should email Jorge Almeida for questions and applications. Please send an email with the subject “Post-doc position underERC - ContentMAP” with your*curriculum vitae, list of publications, 2 reference letters, and a short description of your experience in the field and how you fulfill the requirements (fit with the position)* to: jorgealmeida(a)fpce.uc.pt.

Nov. 6, 2018

Research internship for 2nd year master student in Toulouse, France

by MASQUELIER Timothee

TOPIC: Spiking neural networks for bird song detection SUPERVISORS: Timothée Masquelier (computational neuroscience) and Thomas Pellegrini (machine learning for audio processing) STARTING DATE: early 2019 DURATION: 5 months PLACE: Toulouse, France (Centre de Recherche Cerveau et Cognition and Institut de Recherche en Informatique de Toulouse) STIPEND: 560€/month The goal of the internship is to use spiking neural networks (SNN) to detect bird songs in audio recordings. Several learning rules will be evaluated, including spike-timing-dependent plasticity (STDP). More information: https://www.dropbox.com/s/psvqubjdlral6zf/Masquelier-Pellegrini-AO%20M2%20T… We are looking for an outstanding student with a strong quantitative background (computer science, physics, applied maths...) and a keen interest in neuroscience. Applicants should send their CV and a brief statement of purpose to: timothee.masquelier(a)cnrs.fr and Thomas.Pellegrini(a)irit.fr Informal enquiries are welcome.

Nov. 5, 2018

Postdoc at Aix-Marseille University in computational modelling of basal-ganglia-cortico-cerebellar circuits

by BATTAGLIA Demian

Applications are invited for a: POSTDOCTORAL POSITION at Aix-Marseille University (southern France) under the joint mentoring of Dr. Demian Battaglia (Institute for Systems Neuroscience - INS) and Dr. Nicole Malfait (Institut de Neurosciences de la Timone - INT). This two-years position is funded by the project ANR (Agence National de la Recherche) “SENCE - Movement disorders in Parkinson’s disease: The role of somatoSENsory deficits and CErebellar anomalies”, involving researchers from Aix-Marseille University and the University of Oxford, as well as clinicians of the Hôpital de la Timone (AP-HM). In the context of this project, behavioral, electrophysiological (EEG/subthalamic nucleus LFP) and neuroimaging data will be recorded in patients with Parkinson's disease, under different medication (ON/OFF L-Dopa) and deep brain stimulation (DBS) conditions. In particular, effects of conventional continuous “open-loop” and "closed-loop" (adaptive) DBS will be contrasted. Rich expertise will be thus available in psychophysics and electrophysiology of sensorimotor systems (Nicole Malfait, INT; Huiling Tan, University of Oxford), structural and functional neuroimaging analyses (Olivier Coulon, INT), basal ganglia involvement in sensorimotor coordination (Andrea Brovelli, INT), and DBS (Alexandre Eusebio, AP-HM; Huiling Tan, University of Oxford) and theoretical and computational modelling of oscillating circuits dynamics (Demian Battaglia, INS). The postdoctoral fellow will participate to the design of circuit models (mean-field and spiking) with realistic anatomy, including known basal ganglia/cortical loops, as well as connections between basal ganglia and cerebellum, whose role has been until now only poorly studied. It has indeed recently been hypothesized that basal ganglia deregulation may directly interact with cerebellar predictive functions contributing to movement disorders in Parkinsons’s disease. Computational simulations of extended BG–cortex–cerebellum circuits will be used to reverse engineer circuit mechanisms responsible for the transition from normal to pathological oscillatory dynamics –also in relation to Dopamine levels– and to model and optimize the impact of adaptive deep brain stimulation protocols. Candidates should have already acquired experience in the computational modelling of neural circuits during their PhD. Previous experience in the modelling of BG circuits is a plus. Candidates should be able to work in a dynamic, interdisciplinary and international work environment. Salary corresponds to French national guidelines (~2K € net per month, experience-dependent), with travel and equipment funds. The successful candidate will integrate the Theoretical Neuroscience Group at the Institute for Systems Neuroscience (INS), located on the same campus as the Institut des Neuroscience de la Timone (INT) and the Hôpital de la Timone (AP-HM). The integrative and clinical neuroscience community in Marseille is among the most lively in Europe and Marseille is a vibrating city, with wonderful natural surroundings and home to the largest French-speaking university in the world, with an emphasis on interdisciplinary studies. Interested candidates should send a cv, a brief description of qualifications and research interests and the name of two reference contacts to both the co-directors: Demian Battaglia demian.battaglia(a)univ-amu.fr<mailto:demian.battaglia@univ-amu.fr> Nicole Malfait nicole.malfait(a)univ-amu.fr<mailto:nicole.malfait@univ-amu.fr> Feel free to inquire for further information. Applications from under-represented categories in STEM sciences are welcome and supported.

Nov. 4, 2018

Postdoc Position in Neural Data Analysis, University of Edinburgh

by Arno Onken

The School of Informatics, University of Edinburgh, invites applications for a full-time, fixed term Research Associate position on the project "Novel techniques for stochastic modelling of time-dependent multivariate relationships with application to primary visual cortex", funded by the UK Engineering and Physical Sciences Research Council (EPSRC), and directed by Dr Arno Onken (PI). The successful candidate will contribute to the development of a new framework for analysing multi-modal and multi-scale neural recordings. Moreover, the candidate will apply this framework to analyse activity of large neural populations recorded from awake mice during a virtual reality task by experimental project partner Dr Nathalie Rochefort. Candidates should have a PhD (or near completion) in a quantitative discipline (Mathematics, Computer Science, Physics, Computational Neuroscience or related), good software development skills and a keen interest in interdisciplinary research. A background in neuroscience is desirable, but not essential. The post is full time and fixed term at UE07: £33,199 - £39,609 pa. The post is available from 1st March 2019 for 36 months until the scheduled end of the project at 28th February 2022. For further information, please visit the vacancy website at: https://www.vacancies.ed.ac.uk/pls/corehrrecruit/erq_jobspec_version_4.jobs… Informal enquires can be made to Dr Arno Onken <aonken(a)inf.ed.ac.uk>. -- The University of Edinburgh is a charitable body, registered in Scotland, with registration number SC005336.

Oct. 30, 2018

PhD in Cognitive Sciences at UC Irvine

by Jeff Krichmar

Dear colleagues, The Department of Cognitive Sciences at UC Irvine has a number of openings for new graduate students starting Fall of 2019. We are in the process of expanding our graduate program, so please feel free to forward this information to any interested parties. All this information and more can be found via cogs.ci. Our department specializes in • Computational and mathematical cognitive modeling • Cognitive neuroscience • Visual and auditory perception • Attention and representation • Learning and development • Memory and language • Judgment and decision making ... and is generally strong in the use of leading technologies such as EEG, fMRI, and robotics, and of modern research tools such as computational methods, big data, and Bayesian statistics. We offer PhD degrees in Cognitive Sciences with an optional specialization in cognitive neuroscience and an optional joint degree (MS/PhD) in Statistics. We also take pride in offering excellent financial packages to our graduate students, including at least five years of guaranteed support, health insurance, research funding, and more. These positions are also open to international students with appropriate academic qualifications (i.e., a Bachelor's degree in a relevant field). This year's deadline to apply is December 1, 2018. We are happy to answer questions you or your students might have. Best, Joachim & Jeff -- Joachim Vandekerckhove Associate Professor Department of Cognitive Sciences Department of Statistics University of California, Irvine Jeff Krichmar Department of Cognitive Sciences 2328 Social & Behavioral Sciences Gateway University of California, Irvine Irvine, CA 92697-5100 jkrichma(a)uci.edu http://www.socsci.uci.edu/~jkrichma

Oct. 30, 2018

Faculty position at the University of Minnesota, School of Mathematics

by Duane Nykamp

The School of Mathematics at the University of Minnesota has identified Mathematical Biology, including Computational Neuroscience, as a priority area for hiring and invites qualified candidates to apply. Current areas of focus in the department are cancer modeling, cell motility, continuum mechanics in biology, neuroscience, and stochastic processes. Application available at https://www.mathjobs.org/jobs/jobs/12436.

Oct. 30, 2018

Postdoctoral Position - BRAIN Initiative

by Woolnough, Oscar

POSTDOCTORAL RESEARCH POSITIONS FUNDED BY BRAIN INITIATIVE GRANT Postdoctoral research positions are available in the lab of Nitin Tandon in Houston. This position is funded by a BRAIN Initiative U01 grant project that uses electro-corticographic (ECoG) recordings and fMRI on a large cohort (n>80) to evaluate psycholinguistic models of reading and speech production to create network level representations of language. Collaborators on the project include Greg Hickok, Stanislas Dehaene, Nathan Crone and Xaq Pitkow; the post-doc will benefit from a close interaction with these experts in the fields of reading, semantics, speech production and computational neuroscience. The selected individuals are expected to be a highly motivated team players with a passion to study cognitive processes using imaging, direct recordings and closed-loop cortical stimulation in humans. They will be responsible for 1) data collection in the epilepsy monitoring unit and in the MRI scanner 2) ECoG and/or fMRI data analysis using analysis pipelines existent in the lab and via the development of innovative analytic strategies including machine learning and AI approaches 3) data presentation at conferences and manuscript preparation. The selected individuals must have a Ph.D. in a field relating to: neuroscience, psychology, cognitive science, mathematics, electrical engineering or computer science. Previous experience in neural time series data analysis, functional imaging studies or studies of language and speech production are desirable – but not crucial. They must possess the ability to independently code in any or all of the following: MATLAB, R or Python. Given the multiple unpredictable variables and privacy issues around data collection in human patients, the individual must possess high ethical and professionalism standards, be able to adapt to a changing environment, reorganize schedules dynamically, and work with short deadlines. A strong publication record and excellent academic credentials are highly desirable. CONTACT DR. NITIN TANDON: Nitin.Tandon(a)uth.tmc.edu<mailto:Nitin.Tandon@uth.tmc.edu> Candidates who are attending the Society for Neuroscience annual meeting at San Diego in November should reach out to schedule a meeting.

Oct. 29, 2018

SfN 2018 - Visit the Bernstein Network Computational Neuroscience at booth #4325

by Kerstin Schwarzwaelder

Dear all, The Bernstein Network Computational Neuroscience will be an exhibitor at the SfN Meeting 2018. Please find us at the NEUROSCIENCE IN GERMANY booth #4325. The Bernstein Network will present: * research fields * study and training programs * open positions * research and funding opportunities * infrastructural facilities Furthermore, the German Neuroinformatics Node (G-Node) will present their data management services for organizing, sharing, and publishing research data. Demo presentations times are: Sunday, Monday, Wednesday (Nov 4, 5, 7) 10am - 12pm and 3pm - 5pm, or by individual appointment (mail to: info(a)g-node.org<mailto:info@g-node.org>). We are looking forward to welcoming you at booth #4325! Best regards, Kerstin Schwarzwaelder -- Dr. Kerstin Schwarzwälder Scientific Coordination / Management Officer Please note: Our email addresses have changed. Please use k.schwarzwaelder(a)fz-juelich.de<mailto:k.schwarzwaelder@fz-juelich.de> Bernstein Network Computational Neuroscience | Bernstein Coordination Site (BCOS) Branch Office of the Forschungszentrum Jülich at the University of Freiburg Hansastr. 9A | 79104 Freiburg, Germany phone: (+49) 0761 203 9589 mail: k.schwarzwaelder(a)fz-juelich.de<mailto:k.schwarzwaelder@fz-juelich.de> web: www.nncn.de<http://www.nncn.de> Twitter: NNCN_Germany<https://twitter.com/NNCN_Germany> YouTube: Bernstein TV<https://www.youtube.com/user/BernsteinNetwork> Facebook: Bernstein Network Computational Neuroscience, Germany<https://www.facebook.com/BernsteinNetwork/> LinkedIn: Bernstein Network Computational Neuroscience, Germany<https://www.linkedin.com/company/bernstein-network-computational-neuroscien…> <https://www.linkedin.com/company/bernstein-network-computational-neuroscien…> ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Juelich GmbH 52425 Juelich Sitz der Gesellschaft: Juelich Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Dr. Karl Eugen Huthmacher Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender), Karsten Beneke (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt, Prof. Dr. Sebastian M. Schmidt ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------

Oct. 29, 2018

Postdoctoral Swartz Fellowship Positions in Theoretical and Computational Neuroscience at Yale University

by Murray, John

Postdoctoral Swartz Fellowship Positions in Theoretical and Computational Neuroscience at Yale University The Swartz Center in Theoretical Neurobiology at Yale University invites applications for up to two postdoctoral positions in Theoretical and Computational Neuroscience, with flexible start date from mid to late 2019. Competitive candidates include those with a strong quantitative background who wish to gain neuroscience research experience. We especially encourage candidates with an interest in collaborating directly with experimental neuroscientists. The candidates will be expected to perform theoretical/computational studies relevant to one or more laboratories of the Swartz Center at Yale (for a list of affiliated faculty, see: https://medicine.yale.edu/neuroscience/swartz/corelabs.aspx) and will be encouraged to participate in an expanding quantitative biology environment. Candidates must hold a Ph.D. or equivalent degree by the time of beginning the fellowship. Please send a Curriculum Vitae, selected reprints, contact information for three references, and a statement of research interests including the laboratories of interest at Yale. All application materials should be sent electronically to the following e-mail address: john.murray(a)yale.edu<mailto:john.murray@yale.edu> Applications will be reviewed as they are received, but priority will be given to those received on or before January 12th, 2019. For any questions, please contact John Murray<mailto:john.murray@yale.edu?subject=Swartz%20fellowship>. Yale University is an affirmative action/equal opportunity employer. Yale values diversity in its faculty, students, and staff and especially welcomes applications from women and underrepresented minorities. http://neurojobs.sfn.org/jobs/10584092/<https://urldefense.proofpoint.com/v2/url?u=http-3A__neurojobs.sfn.org_jobs_…> John D. Murray ----------------------------------------------- Assistant Professor Department of Psychiatry Yale University School of Medicine murraylab.yale.edu<http://murraylab.yale.edu/> -----------------------------------------------

Oct. 29, 2018