- Comp-neuro - lists.cnsorg.org

Fully funded PhD positions in Frankfurt, Germany

by Martin Vinck

Apologies for cross-posting: The laboratory of Dr. Martin Vinck at the Ernst Struengmann Institute for Neuroscience in Cooperation with Max Planck Society <http://www.esi-frankfurt.de/esi-frankfurt/>is seeking multiple candidates for computational neuroscience Ph.D. positions to be filled in Spring/Early Summer 2019. Positions are fully funded. These positions encompass following projects: 1) Theoretical and data-analytical approaches to population coding in the nervous system. These include: - Mathematical approaches to understand the relationship between rate and temporal coding. - Development of unsupervised machine learning techniques to study neuronal patterns in high-dimensional state-spaces, with an emphasis on temporal sequencies in neural activity. This work builds further on our recent Plos Computational Biology paper. <https://doi.org/10.1371/journal.pcbi.1006283> - Study of state-space trajectories on short time-scales. 2) Study of travelling wave patterns from electrode arrays. The goal here is to detect different kinds of spatio-temporal travelling wave patterns and understand how they relate to behavior and sensory stimulation. 3) The study of predictive coding using deep learning network models. These projects include: - Use of deep learning models for predictive coding models, and optimization of learning strategies in unsupervised learning models. - Predicting features of neural activity from these models. 4) Development of algorithms and open-source platform for efficient analysis of high-dimensional neural datasets on high-performance computing clusters and GPUs in Julia or Python. The focus is on the extraction of network correlation measures in high-dimensional spiking datasets, and the development of new tools to quantify Granger-causality and spike-field coherence. PhD students will work together with experimental neuroscientists in our laboratory and apply methods and models on experimental datasets from primate and rodent animal models. Experiments in the laboratory include multi-areal electrophysiology with sillicon probes together with optogenetics. It is also possible for PhD students to participate actively in these experiments. We are primarily looking for students with training in a quantitative discipline (physics, electrical or biomedical engineering, computer science, mathematics, etc.), or neuroscientists with additional quantitative training. Some experience with neuroscience, or a proven interest in neuroscience, is a pre, but not a must. Frankfurt is an internationally oriented city with many prestigious neuroscience institutes in the neighbourhood, e.g. the Max Planck Institute for Brain Research <http://brain.mpg.de/home.html>, the FIAS <https://fias.institute/> and the Interdisciplinary Center for Neuroscience <https://www.izn-frankfurt.de/en/>. Major collaborator on this project is Dr. Francesco Battaglia from the Donders Centre, Nijmegen. ------------------------------ Interested candidates are invited to send their application materials in electronic form (PDF format) to martin.vinck(a)esi-frankfurt.de Applications should contain a letter of intent, a detailed curriculum vitae, lists of university courses completed with marks obtained, and the names of at least two scientists who can give references (or at least two reference letters). Please indicate which projects are of your core interest. First deadline is 15th of April. The advertisement will be valid until positions are filled.

April 9, 2019

MIT challenge and workshop (July 19-20): The Algonauts project - explaining brain data with computational models

by Yalda Mohsenzadeh

Dear community, The Algonauts Project has launched its first Challenge, Explaining the Human Visual Brain<http://algonauts.csail.mit.edu/>, inviting you to come up with a computer model of how the human brain sees and recognizes objects. Participants who develop the best models will be invited to present their work at a workshop July 19-20 at MIT in Cambridge, Mass. The overall goal of the Algonauts Project is to explain brain data with computational models, and to bring biological and AI researchers together on a common platform to advance human and machine intelligence research. To enter the 2019 Explaining the Human Visual Brain Challenge, download the development kit and data here: http://algonauts.csail.mit.edu/challenge.html The deadline to submit a model is June 22, 2019. Please also join us July 19-20 at MIT for the Algonauts’ Explaining the Human Visual Brain Workshop. The workshop will feature student tutorials, presentations from Challenge winners, and talks by pioneers in neuroscience, cognitive science and computer science. Good luck with your submission and we look forward to seeing you at the workshop in July! Best, The Algonauts Project team Organizers: Radoslaw Cichy, FUB Aude Oliva, MIT Gemma Roig, SUDT

April 9, 2019

Nottingham Fellowships in: Mathematical Neuroscience, Computational Imaging

by Stephen Coombes

Nottingham Research and Anne McLaren Fellowship Opportunities in the Precision Imaging Beacon Fellowships in: Mathematical Neuroscience Computational Imaging - AI https://www.nottingham.ac.uk/jobs/currentvacancies/ref/NARFB2019X2 <https://www.nottingham.ac.uk/jobs/currentvacancies/ref/NARFB2019X2> This is an exciting opportunity to join the research team in the Precision Imaging Beacon of Excellence, which is driving the discovery and translation of new imaging tools which will transform non-invasive diagnosis, improve the outcomes for patients, and allow better evaluation of the success of medical interventions. Our prestigious internal fellowship schemes are a fundamental part of the University of Nottingham’s Research Vision and support its aim to recruit the next generation of outstanding research leaders. We will be recruiting a diverse cohort of 100 Nottingham and Anne McLaren Research Fellows by the end of 2022, and as part of this we are particularly interested to recruit outstanding candidates to the Precision Imaging Beacon. Beacon fellows will be supported to develop an independent research career, whilst actively contributing to the aims of the Beacon Research Programme and are expected to become active members of the Sir Peter Mansfield Imaging Centre (SPMIC). We support applicants with diverse career paths and backgrounds and also welcome applications from those wishing to work part-time in order to combine the fellowship with personal responsibilities. Each fellowship offers: Three years independent funding, (nominal start date October 2019), to conduct research while based at the University of Nottingham. Extensive career development support, including participation in a mentoring scheme Competitive salary set on the Clinical Academic Salary Scale or Research and Teaching Staff Scales Level 5 The linking of the Fellowship to an established academic post for scientists Research expenses totalling £75,000. Additional childcare costs of up to £5,000 per annum Relocation expenses of up to £1,500 The opportunity to spend periods of time at University of Nottingham Campuses in China and Malaysia. Closing Date Wednesday, 8th May 2019 ----------------------------------------------------- Stephen Coombes Professor of Applied Mathematics School of Mathematical Sciences Nottingham, UK Tel: 0115 846 7836 http://www.maths.nott.ac.uk/~sc/ ----------------------------------------------------- This message and any attachment are intended solely for the addressee and may contain confidential information. If you have received this message in error, please contact the sender and delete the email and attachment. Any views or opinions expressed by the author of this email do not necessarily reflect the views of the University of Nottingham. Email communications with the University of Nottingham may be monitored where permitted by law.

April 8, 2019

Post-doctoral Research Scientist or PhD candidate in Cochlear Implant Psychoacoustics and (neural) Modeling

by Seeber, Bernhard

Dear List, we are inviting applications for a post-doctoral research scientist or a PhD candidate to join our team in cochlear implant research/psychoacoustics. Main responsibilities are: - Research on binaural hearing and auditory scene analysis with users of auditory neuronal prostheses (cochlear implants) - Development of listening tests and stimulation strategies using direct stimulation of cochlear implants - Measurement and modeling of neuronal processing and statistical analysis of the results - Publication in English-language scientific journals and presentations at conferences - Supervision of student projects, assistance with teaching and with raising external funding. The position is full time and will start at the earliest convenient date. Qualifications: - (Interest in completing a) Doctoral degree (PhD) in one of the following areas: psychoacoustics, medical physics/audiology, neuroscience, audio technology, acoustics, signal processing, or a related area - Knowledge and experience desirable in designing and analyzing psychoacoustic experiments, direct stimulation of cochlear implants, algorithms for hearing devices, auditory scene analysis, binaural hearing, models of the auditory system, audio signal processing - Very good programming skills in Matlab, Python, or C/C++ - Excellent written and oral communication skills as well as experience with scientific publications - Knowledge and command of the German language desirable for working with cochlear implant users - Interest in basic research and the development of technical systems for medical applications - Flexibility and good interpersonal skills - Interest in supervising students, helping with teaching and raising external funds. We offer... you the opportunity to join an interdisciplinary team, to work with up-to-date technical equipment including sound booths equipped with direct stimulation hardware for cochlear implants, an anechoic chamber hosting an audio-visual virtual reality system, and to learn about the latest methods in hearing research. Our close interaction with the Bernstein Centre for Computational Neuroscience Munich (www.bccn-munich.de) the Munich School of BioEngineering (www.bioengineering.tum.de) the Graduate School of Systemic Neurosciences (www.gsn.uni-muenchen.de) the Hearing Research Network Munich, our extensive cooperation with industry and with scientific partners, and the numerous courses offered at TUM create an attractive environment with excellent perspectives for personal development. Please find further information at www.aip.ei.tum.de. Employment is according to the state employees salary scheme (TV-L/E13) and is initially for 1 year and intended to be extended. Women are explicitly encouraged to apply. Severely handicapped persons will be favored if they are equally qualified. In principle, the position could also be filled part-time. Munich - the city famous for the Oktoberfest, high-end cars and its unique location to the Alps - is a bustling, international and interesting place to live which offers a wide range of opportunities to engage in cultural and leisurely activities - from opera to skiing. Interested? I look forward to answering your questions on the phone (+49 89 289 28282) or by email. Please send your expressive application stating research interests preferably by email no later than 12 May 2019 to: Prof. Dr.-Ing. Bernhard Seeber Professorship of Audio Information Processing Technical University of Munich Arcisstrasse 21 80333 Munich, Germany Email: aip(a)ei.tum.de. Data Protection Information: When you apply for a position with the Technical University of Munich (TUM), you are submitting personal information. Please take note of TUM's data protection information for collecting and processing the personal data contained in your application in accordance with Art. 13 of the General Data Protection Regulation. By submitting your application, you confirm that you have acknowledged the above data protection information. The job advertisement can be downloaded from: http://www.aip.ei.tum.de/fileadmin/w00bmm/www/Stellenanzeigen/BCCN_Post_Doc… Kind regards, Bernhard -- Prof. Dr.-Ing. Bernhard U. Seeber Audio Information Processing Dept. of Electrical and Computer Engineering Technische Universität München Arcisstrasse 21 D-80333 Munich, Germany Office: +49 89 289-28282 Fax: +49 89 289-28211 Mobile: +49 (0)174 928 6338 Visitors: Theresienstrasse 90, building N5, room N6504 Web: www.aip.ei.tum.de

April 6, 2019

Post-doctoral associate machine learning and human auditory neuroscience

by Jochem Rieger

Dear list, The DFG-funded cluster of Excellence "Hearing 4 All" has an open post-doctoral position in project "Characterizing central neural speech processing in normal and hearing impaired listeners using machine learning". The aim of the project is to combine neurophysiological measurements (fMRI and/or MEG/EEG) with data driven machine learning to characterize cortical consequences of hearing loss. We offer an international and interdisciplinary research environment and access to up-to-date research facilities. The position is available from June 1st, 2019 until October 31st, 2022. Salary level German TV-L E13, full time. The salary includes an experience dependent component. Application deadline is April 20th 2019 The full job announcement can be found here: https://uol.de/stellen/?stelle=66544 Contact for further questions is jochem.rieger(a)uol.de Oldenburg is a city in northern Germany with high quality of life. It is located 1h from the north sea and 30 min from Bremen. Please forward this message to people who might be interested Regards, Jochem -- Prof. Dr. rer. nat. Jochem Rieger Head of Applied Neurocognitive Head of Neuroimaging Unit Psychology Faculty VI Carl-von-Ossietzky University 26111 Oldenburg Germany Phone: +49(0)4417984533 Fax: +49(0)4417983865

April 5, 2019

Barcelona summer school for Advanced Modelling of Behavior (BAMB!), September 4-10, 2019

by Alexandre Hyafil

The new Barcelona summer school for Advanced Modelling of Behavior (BAMB! <http://www.bambschool.org>) teaches advanced techniques in model-based analysis of behavior (humans and other species) to cognitive and computational neuroscientists at PhD and early career levels. This will be achieved through structured lectures, talks, hands-on tutorials and group project aimed at making knowledge obtained directly applicable to the participants' own research. We want the trainees to acquire both the conceptual bases and the technical skills that will enable them to pursue a full modelling approach on their own when they come back to their lab. The course is intended for PhD students and postdocs in cognitive and computational neuroscience with solid background in computational/quantitative analysis to benefit maximally from the advanced training offered by the course. Proficiency in either Python or Matlab is also required. We will seek a nice blend of experimentalists (cognitive psychology / neuroscience) and theoreticians (with or without experience in cognitive modeling). Female scientists and scientists from underrepresented countries are especially encouraged to apply. Organizers: Chris Summerfield (Oxford / Deepmind) Klaus Wimmer (CRM, Barcelona) Alex Hyafil (UPF/CRM, Barcelona) Confirmed Faculty: Jean Daunizeau (ICM, Paris) Alex Hyafil (UPF/CRM, Barcelona) Kerstin Preuschoff (Geneva) Alfonso Renard (Champalimaud) Maneesh Sahani (UCL) Chris Summerfield (Oxford / Deepmind) Klaus Wimmer (CRM, Barcelona) Angela Yu (UC San Diego) Dates and location: September 4-10 2019, downtown Barcelona, Spain Applications are open until June 3rd. Please see the course website for further details: www.bambschool.org. The summer school benefits from the generous support of the William K. and Katherine W. Estes Fund <https://www.psychologicalscience.org/members/awards-and-honors/estes-fund>, from the Sociedad Española de Neurociencia <http://www.senc.es/> and from the Centre de Recerca Matemática <http://www.crm.cat>.

April 5, 2019

MSc in Computational and Systems Neuroscience – University of Leicester

by CSN

MSc in Computational and Systems Neuroscience – University of Leicester We are delighted to introduce a new one-year, full-time postgraduate degree covering theoretical and practical aspects of modern computational neuroscience, and their applications in areas of cellular, systems and cognitive neuroscience. Students will learn the basics of neuroscience and how to apply different approaches from artificial intelligence and machine learning into neuroscience data modelling and analysis. The MSc Project will provide substantial experience with the main steps of undertaking a neuroscience research project, including experimental design, data acquisition, analysis and result interpretation. The programme will take advantage of the expertise of Centre for Systems Neuroscience (CSN) staff, whose research bridges the experimental and theoretical worlds. Applications for October 2019 entry will be accepted in May 2019. We welcome applicants with a background in Psychology, Biological Sciences (or related disciplines), Neuroscience, Computer Science, Engineering, Physics, or Mathematics. Further details can be found on our webpage: https://le.ac.uk/courses/computational-and-systems-neuroscience-msc/2019 Please contact Joy Kocik on msccn(a)le.ac.uk or +44 (0) 116 373 6264 for more information. With best regards, Dr Hernan Rey Programme Lead University of Leicester

April 5, 2019

Registration now open for Neural Coding, Computation and Dynamics

by Peter Latham

Neural Coding, Computation and Dynamics (NCCD) September 22 - 25, 2019 Capbreton, France https://nccd2019.sciencesconf.org Registration now open! Important dates: May 20: abstract submission deadline June 3: early registration deadline NCCD19 is the fourth in a series of meetings focusing on topics in theoretical and experimental neuroscience. As with previous workshops, our goal is to foster the strong interactions we believe are so important for this field. So the meeting will be small (~70 people). About half the talks will be invited and half contributed, and there will be poster sessions on two of the nights. Time for informal discussion will be emphasized during breaks and at mealtimes - with lunch and dinner at the conference venue included in the cost of registration. Venue: Casino de Capbreton, Capbreton, France. https://www.casino-capbreton.com/ translation to English: https://translate.google.com/translate?hl=en&sl=fr&u=https://www.casino-cap… Important dates: May 20: abstract submission deadline June 3: early registration deadline Confirmed speakers: Athena Akrami (UCL) Mitya Chklovskii (Flatiron Institute NYU) Marlene Cohen (Pittsburgh) Sandeep Robert Datta (Harvard) David Kleinfeld (UCSD) Peter Latham (UCL) Gilles Laurent (Max Planck Frankfurt) Stephanie Palmer (Chicago) Alex Pouget (Geneva) Daniela Vallentin (Berlin) Organizers: Andrea Hasenstaub (UCSF) Srdjan Ostojic (ENS Paris) Peter Latham (UCL) Previous meetings: http://www.gatsby.ucl.ac.uk/nccd/

April 5, 2019

Stanford Postdoctoral Fellowship: Computational Modeling of Brain Networks

by Christina Atkinson

POSTDOCTORAL FELLOWSHIP IN COMPUTATIONAL MODELING OF BRAIN NETWORKS   Currently Available: The Stanford Cognitive and Systems Neuroscience Laboratory invites applications for a postdoctoral fellowship in computational modeling of human brain imaging data using deep neural networks. The successful candidate will be involved in a multidisciplinary project that seeks to develop novel computational frameworks for robust identification of neurobiological signatures of psychiatric and neurological disorders combining deep learning and convolution networks and dynamic brain circuit analyses with task and resting-state fMRI. Clinical disorders currently under investigation include autism, ADHD, anxiety and mood disorders, learning disabilities, schizophrenia, and Parkinson’s disease. We seek talented and highly-motivated individuals with a strong background in at least one of these areas: deep learning algorithms and optimization (theory and practical implementations); computational modeling, statistical inference, and machine learning, especially as applied to fMRI and MRI data. The candidate will have access to multiple large datasets and state-of-the-art computational resources, including HPCs and GPGPUs. Please email a CV, statement of research interests and relevant background, and have three letters of reference sent to Drs. Vinod Menon and Aarthi Padmanabhan at scsnl.stanford+postdoc(a)gmail.com<mailto:scsnl.stanford@gmail.com>

April 4, 2019

Full PhD scholarship on Research in areas of Machine Learning and Data Science, Western Sydney University, Australia

by Oliver Obst

We are offering a research scholarship and tuition fee waiver to a highly motivated PhD student at the Centre for Research in Mathematics, Western Sydney University. Our team conducts research both in the theoretical aspects of data science, such as computational statistics and machine learning methods (for example deep learning and reinforcement learning), as well as in problems arising from applications across a very broad spectrum of partners in business and government. Required qualifications are a first class honours or a Master degree with a research component, in relevant areas of Computer Science, Data Science, Mathematics or Statistics. For details, please see the full information here: http://bit.ly/2UkpCvS and contact me at o.obst(a)westernsydney.edu.au<mailto:o.obst@westernsydney.edu.au> to discuss potential projects. Applications close 30 Apr 2019 (11:59pm Australian Eastern Standard Time). -- Oliver Obst, Associate Professor in Data Science Centre for Research in Mathematics Director for Research, Quality, and Innovation School of Computing, Engineering, and Maths Western Sydney University, Parramatta +61 2 9685 9429 http://www.oliverobst.eu/

April 4, 2019