January 2025 - Comp-neuro - lists.cnsorg.org

[Meetings] Deadline reminder: 2025 Nengo Summer School Call For Applications

by Michael Furlong

Dear colleagues, Please note that the deadline for application submission to the Nengo Summer School, February 1st, 2025, is approaching. [All details about this school can be found online at https://www.nengo.ai/summer-school] The Centre for Theoretical Neuroscience at the University of Waterloo is excited to announce our 10th annual Nengo summer school on large-scale brain modelling and neuromorphic computing. This two-week school will teach participants to use the Nengo simulation package to build state-of-the-art cognitive and neural models to run both in simulation and on neuromorphic hardware. Summer school participants will be given on-site access to neuromorphic hardware and will learn to run high-level applications using Nengo! More generally, Nengo provides users with a versatile and powerful environment for designing cognitive and neural systems and has been used to build what is currently the world's largest functional brain model, Spaun, which includes spiking deep learning, reinforcement learning, adaptive motor control, and cognitive control networks. For a look at the last in-person summer school, check out this short video: https://youtu.be/nFYTqieEnSY We welcome applications from all interested graduate students, postdocs, professors, and industry professionals with a relevant background. ***Application Deadline: February 1, 2025*** Format: A combination of tutorials and project-based work. Participants are encouraged to bring their own ideas for projects, which may focus on testing hypotheses, modelling neural or cognitive data, implementing specific behavioural functions with neurons, expanding past models, or providing a proof-of-concept of various neural mechanisms. Hands-on tutorials, work on individual or group projects, and talks from invited faculty members will make up the bulk of day-to-day activities. A project demonstration event will be held on the last day of the school, with prizes for strong projects! Participants will have the opportunity to learn how to: * interface Nengo with various kinds of neuromorphic hardware (e.g. BrainDrop, SpiNNaker) * build perceptual, motor, and sophisticated cognitive models using spiking neurons * model anatomical, electrophysiological, cognitive, and behavioural data * use a variety of single cell models within a large-scale model  * integrate machine learning methods into biologically oriented models * interface Nengo with cameras and robotic systems * implement modern nonlinear control methods in neural models * and much more… Date and Location: June 1st to June 13th, 2025 at the University of Waterloo, Ontario, Canada. Applications: Please visit http://www.nengo.ai/summer-school, where you can find more information regarding costs, travel, lodging, along with an application form listing required materials. If you have any questions about the school or the application process, please contact Michael Furlong (michael.furlong(a)uwaterloo.ca) The school is partly supported by ABR, Inc. We look forward to hearing from you!

Jan. 15, 2025

Registration Open: Advanced Course on “Computational Approaches to Neuronal and Behavioral Data Analysis

by Leandro Aguiar

Dear colleagues, Please share and disseminate through your network. On behalf of all the organizers, I am pleased to announce that registration is open for the Advanced Course on “Computational Approaches to Neuronal and Behavioral Data Analysis,” which will be held in a hybrid format: in-person at Braga, Portugal, and online via Zoom, from *April 22 to May 9, 2025*. Please refer to the course website for more information: https://meetings.embo.org/event/25-data-analysis The course will provide in-depth training across five specialized modules: 1. *Fundamentals of Programming and Python* – Covering Python basics, packages like NumPy, Pandas, and Matplotlib, and advanced exercises such as raster plot mapping. 2. *Behavioral Data Analysis* – Using tools like DeepLabCut for pose estimation and structuring datasets for behavioral insights. 3. *Calcium and Neurotransmitter Signal Analysis* – Focusing on fiber photometry, calcium imaging, and integrating behavioral data. 4. *Electrophysiological Data Analysis* – Exploring spike sorting, neuron clustering, and synchronizing electrophysiological data with behavioral events. 5. *fMRI Data Analysis* – Examining dynamic functional connectivity and group-level comparisons. This hybrid format allows participants worldwide to join either in person or online, making it accessible and flexible. We encourage researchers from Academia and Industry, at all career stages, to register and participate. Early registration is highly recommended due to limited in-person capacity and the hybrid nature of the event. For program details and registration, please visit: https://meetings.embo.org/event/25-data-analysis Thank you for sharing this exciting opportunity with your network. Best regards, Leandro Aguiar Postdoctoral Researcher Life and Health Sciences Research Institute (ICVS) School of Medicine, University of Minho

Jan. 15, 2025

Computational Visual Neuroscience Postdoc Position at EPFL in Geneva, Switzerland

by Ryan McNamara

Dear Comp-Neuro, We are seeking a postdoctoral researcher for a one-year (renewable) project within the MIP:Lab of the Ecole Polytechnique Fédérale de Lausanne (EPFL) located at the Campus Biotech in Geneva, Switzerland. The project is at the interface between an industrial partner and the MIP:Lab headed by Prof. Dimitri Van De Ville. Start date is as soon as possible (date may be negotiable) and will last for approximately 15 months (renewable). At the end of the postdoc, there will be an opportunity to join the company as an employee. The post-doctoral researcher will join a team of academic and industrial group members to work on new computational modeling frameworks for rapidly time-varying functional networks in late sensory and non-sensory cortex in the context of biofeedback-influenced video viewing. A mix of theoretical, algorithmic, and empirical work is expected, in collaboration with an industrial partner in the healthcare technology/AI field providing behavioral and neural (streaming M/EEG) data. Some first-hand behavioral and neural data (M/EEG) is also expected to be acquired in the M/EEG Platform at the Campus Biotech. We are interested in maintaining the rich diversity in our work teams and encourage applications from all interested candidates. The salary range at EPFL is competitive and the quality of living in Switzerland is outstanding. Qualifications The ideal candidate will have a PhD, strong quantitative, signal processing, and machine learning skills, data analytic expertise (Python and Matlab), and expertise in visual neuroscience. Experience with neuroimaging is required, preferably with human subjects. The candidate should be creative, enjoy problem solving, and be prepared to collaborate within a larger team with diverse expertise. Experience in commercial biomedical development is also preferred. Appropriate background/training includes cognitive, computational, or systems neuroscience, psychology, and visual psychophysics. Application Instructions Please send your motivation letter, CV with publication list, one-page personal research statement, and contact information of three referees, to ryan.mcnamara(a)dandelion.science with subject line “[CV-POSTDOC] <Your Name>”.

Jan. 15, 2025

Transatlantic Behavioural Neuroscience Summer School, Argentina, Aug 11-22 2025, Deadline: Feb 25th

by Mateusz Kostecki

Hello! We are happy to announce the fourth edition of our Transatlantic Behavioural Neuroscience School! It will be held Aug 11-22 in Buenos Aires, Argentina,. During our school you will learn how to deliver stimuli or modify the environment in which the animal is embedded with Arduino-based devices and Bonsai code; you will design and 3D-print cases and holders for your instruments. And then you will apply cutting-edge tools (like Deeplabcut or CEBRA) – to extract as much information as possible from your data. But that’s not everything. At TBNS you will listen to fascinating lectures and interact with speakers, who explored bold ideas and made their unique career paths. You will look at what behavior is through many lenses. Most importantly though, you will meet people with similar interests and goals. And you may become a part of our global Open Lab community, and help us to spread the knowledge further! More information and the application form can be found here - https://nenckiopenlab.org/tbns2025/. The deadline for application is Feb 25th, the fee is EUR 1500 but we have secured funding for fee waivers and travel grants if needed. With best wishes, TBNS Team -- --- Mateusz Kostecki PhD Student Knapska Laboratory Nencki Institute 02-093 Warsaw, Pasteura 3, Poland https://twitter.com/mtkostecki https://evolvingbehavior.blog/

Jan. 14, 2025

Research Fellow position in UCL London (United Kingdom):

by Tua Piehl

*Research Fellow position in UCL Institute of Neurology: Electrophysiology and Computational Modelling of Neurological Diseases* We are seeking a Research Fellow to join our team and use Neuropixels technology in vivo to assess the excitability of brain regions in models of neurological diseases. This project is a key part of a broader research program focused on optimising gene therapy for neurological disorders, with the goal of clinical translation. The position is based at the Lignani Lab <https://www.lignanilab.com/>, within the UCL <https://www.ucl.ac.uk/ion/research/research-departments/department-clinical…>Department of Clinical and Experimental Epilepsy <https://www.ucl.ac.uk/ion/research/research-departments/department-clinical…> . The post is available from 01 February 2025 and is part of an Advanced Research + Invention Agency-funded project, subject to contract negotiations, until 31 January 2027 in the first instance. You will have a PhD or equivalent in Neuroscience (or a related discipline) as well as experience with experimental rodent models of neurological diseases (e.g., epilepsy, dementia, or schizophrenia) and proficiency in electrophysiology, stereotaxic surgery, and electrode implantation. Experience in programming (preferably in MATLAB or Python) and expertise working with rodents, including behavioural assessment and colony management in disease models, is also required for the role. *Application deadline is January 19th, 2025.* *Please apply here:* https://www.ucl.ac.uk/work-at-ucl/search-ucl-jobs/details?jobId=30716&jobTi… If you have any queries regarding the application process, please contact the Institute HR Team, UCL Queen Square Institute of Neurology, 23 Queen Square, London, WC1N 3BG (email: ion.hradmin(a)ucl.ac.uk) For informal enquiries about the role please contact Professor Gabriele Lignani (email: g.lignani(a)ucl.ac.uk) Best wishes, *Tua Piehl* *Research Administrative Assistant* *Lignani Lab* University College London | Queen Square Institute of Neurology | Department of Clinical and Experimental Epilepsy | Queen Square House | London UK, WC1N 3BG | t.piehl(a)ucl.ac.uk | www.lignanilab.com <https://eur01.safelinks.protection.outlook.com/?url=http%3A%2F%2Fwww.lignan…> | twitter: *@LignaniLab_UCL <https://twitter.com/LignaniLab_UCL>*

Jan. 13, 2025

Postdoc positions in Cognitive Neuroscience, Computational Psychiatry and Developmental Psychology, University of Tuebingen, Germany

by Susan Fischer

**Apologies for cross-posting** Dear colleagues, The "Developmental Computational Psychiatry" lab and the W3 professorship "Computational Psychiatry" led by Tobias Hauser at the University of Tübingen (Germany) is currently hiring new postdocs. The focus of the lab is to better understand the computational and neural mechanisms underlying decision making and learning, and how these processes go awry in patients with mental illnesses. The successful candidates will have the chance to work in a highly dynamic and inspiring environment and to collaborate closely with Prof Peter Dayan and the Max-Planck Institute for Biological Cybernetics. Concretely, we are looking for the following candidates: * Postdoc with experimental & neuroimaging (MEG / MRI) background More information about the positions can be found here: https://devcompsy.org/join-the-lab/ Interested candidates are encouraged to reach out to Tobias Hauser directly to informally discuss the positions. Best regards, Susan. ************************************************ Susan Fischer Coordinator Alexander von Humboldt Professorship Prof Peter Dayan & W3-Professorship ‘Computational Psychiatry’, Prof Tobias Hauser Eberhard Karls Universität Tübingen Equal Opportunities Officer Max Planck Institute for Biological Cybernetics Max-Planck-Ring 8 72076 Tübingen Germany ************************************************

Jan. 13, 2025

Free online lecture series 3rd February to 8th February , 2025 - "Data Science Fundamental and Ethical Practices."

by PRANAV NERURKAR

Dear Sir/Madam 𝐆𝐫𝐞𝐞𝐭𝐢𝐧𝐠𝐬 𝐟𝐫𝐨𝐦 Bhartiya Vidhya Bhavan's Sardar Patel Institute of Technology ,Mumbai. We are delighted to inform you that the Department of Computer Science and Engineering is organizing an AICTE Training and Learning (ATAL) Academy -sponsored Online 6-days FDP on "Data Science Fundamental and Ethical Practices." [ No Registration Fees ] 𝐅𝐃𝐏 𝐃𝐮𝐫𝐚𝐭𝐢𝐨𝐧: 6 days Date :3rd February to 8th February , 2025 𝐓𝐢𝐦𝐞: 6:00 pm to 9:30 pm Mode: Online 𝐓𝐚𝐫𝐠𝐞𝐭 𝐀𝐮𝐝𝐢𝐞𝐧𝐜𝐞: Faculty members, research scholars, PG Students from AICTE recognized Engineering institutions, Universities and industry professionals... 𝐍𝐨 𝐑𝐞𝐠𝐢𝐬𝐭𝐫𝐚𝐭𝐢𝐨𝐧 𝐅𝐞𝐞. 𝐏𝐚𝐫𝐭𝐢𝐜𝐢𝐩𝐚𝐧𝐭𝐬 𝐧𝐞𝐞𝐝 𝐭𝐨 𝐫𝐞𝐠𝐢𝐬𝐭𝐞𝐫 𝐟𝐨𝐫 𝐭𝐡𝐞 𝐅𝐃𝐏 𝐢𝐧 𝐭𝐡𝐞 𝐀𝐈𝐂𝐓𝐄 𝐀𝐓𝐀𝐋 𝐩𝐨𝐫𝐭𝐚𝐥 𝐠𝐢𝐯𝐞𝐧 𝐛𝐞𝐥𝐨𝐰: https://lnkd.in/dxjqcycE 𝐌𝐨𝐝𝐞 𝐨𝐟 𝐜𝐨𝐧𝐝𝐮𝐜𝐭𝐢𝐨𝐧: Online Renowned industrialists and Academicians will conduct the sessions in the domain of fundamentals of Data Science ,Artificial Intelligence, Deep Learning and ethical practices related to it 𝑺𝒐 𝑯𝒖𝒓𝒓𝒚 𝒖𝒑!!!! 𝑹𝒆𝒈𝒊𝒔𝒕𝒆𝒓 𝒚𝒐𝒖𝒓𝒔𝒆𝒍𝒇 𝒂𝒔 𝒆𝒂𝒓𝒍𝒚 𝒂𝒔 𝒑𝒐𝒔𝒔𝒊𝒃𝒍𝒆. 𝐏𝐫𝐨𝐜𝐞𝐬𝐬 𝐟𝐨𝐫 𝐑𝐞𝐠𝐢𝐬𝐭𝐫𝐚𝐭𝐢𝐨𝐧: Link: - https://lnkd.in/dYmGF-Td After you click this link, please log in the with your username and password After successful login...Please click on Workshops After clicking on the Workshop link, On the dashboard : Select the state as Maharashtra Select Month as February Select Thrust area as Engineering and Management After doing this you can apply for the Faculty Development "Data Science Fundamentals and Ethical Practices. " Just click on + button to apply for 𝐅𝐃𝐏 𝐀𝐩𝐩𝐥𝐢𝐜𝐚𝐭𝐢𝐨𝐧 𝐍𝐮𝐦𝐛𝐞𝐫: 1730893479 𝐅𝐃𝐏 𝐂𝐨𝐨𝐫𝐝𝐢𝐧𝐚𝐭𝐨𝐫𝐬: Dr. D R Kalbande, Prof.Harshil Kanakia, Contact Person Prof.Harshil Kanakia, Assistant professor Email: harshilkanakia(a)spit.ac.in Mobile No. : 9819740847 Prof. Nikita Mishra, Assistant Professor Email ID: nikita.mishra(a)spit.ac.in Mobile No.9960245133 Prof. Swati Vyas, Assistant Professor Email ID: swati.vyas(a)spit.ac.in Mobile No.9460191074 Warm and Kind regards, *Pranav A. NERURKAR* Specialist - AI & Data science UTKARSH MINDS +91 961-999-77-97 pranav.nerurkar@ <amandine.deplantes(a)igonogo.io>utkarshminds.com www.utkarshminds.com Nirmala Sadan, Jaya Nagar, Kasturba cross road no. 1, Mumbai - 400066

Jan. 13, 2025

World wide VVTNS series (fifth season): Wednesday, January 15, 2025, at 11:00 am EST| Jonathan Pillow, University of Princeton

by David Hansel

[image: VVTNS.png] https://www.wwtns.online <https://streaklinks.com/A9c7PbbpKY7PxB6PaAJWGD3-/https%3A%2F%2Fwww.wwtns.on…> - on twitter: wwtns@TheoreticalWide You are cordially invited to the lecture given by Jonathan Pillow University of Princeton on the topic of *New methods for tracking and control of dynamic animal behavior during learning* The lecture will be held on zoom on Wednesday, January 15, 2025, at *11:00 am EST * To receive the zoom link: https://www.wwtns.online/register-page *Abstract: * The dynamics of learning in natural and artificial environments is a problem of great interest to both neuroscientists and artificial intelligence experts. However, standard analyses of animal training data either treat behavior as fixed, or track only coarse performance statistics (e.g., accuracy and bias), providing limited insight into the dynamic evolution of behavioral strategies over the course of learning. To overcome these limitations, we propose a dynamic psychophysical model that efficiently tracks trial-to-trial changes in behavior over the course of training. In this talk, I will describe recent work based on a dynamic logistic regression model that captures the time-varying dependencies of behavior on stimuli and other task covariates, which we applied to mouse training data from the International Brain Lab (IBL). Secondly, I will discuss efforts to infer animal learning rules from time-varying behavior in order to characterize how they adjust their policy in response to reward. Finally, I will describe recent work on adaptive optimal training, which combines ideas from reinforcement learning and adaptive experimental design to formulate methods for inferring animal learning rules from behavior, and using these rules to speed up animal training. *About VVTNS : Launched as the World Wide Theoretical Neuroscience Seminar (WWTNS) in November 2020 and renamed in homage to Carl van Vreeswijk in Memoriam (April 20, 2022), Speakers have the occasion to talk about theoretical aspects of their work which cannot be discussed in a setting where the majority of the audience consists of experimentalists. The seminars, **held on Wednesdays at 11 am ET,** are 45-50 min long followed by a discussion. The talks are recorded with authorization of the speaker and are available to everybody on our YouTube channel.* ᐧ

Jan. 12, 2025

EMBO Course on Astrocyte Modeling (Padua, IT, April 10-11, 2025)

by De Pitta, Maurizio

Dear colleagues, Please share and disseminate through your network. On behalf of all the organizers, I want to remind you that registration continues to be open for the EMBO Course on “Quantifying Astrocyte Physiology by Models from Genome to Circuits,” which will be held at the University of Padua in Padua, Italy, from April 10 to 11, 2025. Please refer to the course website for further information: https://sites.google.com/view/embo-satellite-meeting/home The course is a Satellite Event of the EMBO Meeting on “Astrocytes: From Molecules to Systems,” which will follow in nearby Venice a couple of days later (April 14–18, 2025). The EMBO Course “Quantifying Astrocyte Physiology by Models from Genome to Circuits” is a two-day intensive course aimed at teaching essential modeling approaches to harness astrocyte biology revolving around four main themes such as (i) astrocyte genomics, (ii) intracellular calcium signaling, (iii) tripartite synapses, (iv) neuron-astrocyte networks. The course is open to researchers of any level in the Academia and Industry. Registration Policy Attendance to the Course is limited to 50 participants due to limited seating. Registrants that are also planning to attend the EMBO Workshop “Astrocytes: From Molecules to Systems” should register through this latter’s website: https://meetings.embo.org/event/25-astrocytes People who will not be selected to attend the EMBO Workshop “Astrocytes: From Molecules to Systems” can still opt to attend the course by registering through the course website: https://sites.google.com/view/embo-satellite-meeting/home Thank you for considering the matter. Maurizio De Pitta ----- Maurizio DE PITTA Principal Investigator Neuron-Glia Interactions Lab (NGILab) Krembil Research Institute, 4KD-509 60 Leonard Ave, Toronto, ON M5T 0S8, CA +1.416.603.5800 ext. 3290 This e-mail may contain confidential and/or privileged information for the sole use of the intended recipient. Any review or distribution by anyone other than the person for whom it was originally intended is strictly prohibited. If you have received this e-mail in error, please contact the sender and delete all copies. Opinions, conclusions or other information contained in this e-mail may not be that of the organization. If you feel you have received an email from UHN of a commercial nature and would like to be removed from the sender's mailing list please do one of the following: (1) Follow any unsubscribe process the sender has included in their email (2) Where no unsubscribe process has been included, reply to the sender and type "unsubscribe" in the subject line. If you require additional information please go to our UHN Newsletters and Mailing Lists page. Please note that we are unable to automatically unsubscribe individuals from all UHN mailing lists. Patient Consent for Email: UHN patients may provide their consent to communicate with UHN about their care using email. All electronic communication carries some risk. Please visit the UHN website and search “Using email to Communicate with Your UHN Health Care Team” to learn about the risks of electronic communication and how to protect your privacy. You may withdraw your consent to receive emails from UHN at any time. Please contact your care provider, if you do not wish to receive emails from UHN.

Jan. 10, 2025

Approaching Deadline for the EMBO Astrocyte Conference (Venice IT, April 14-18, 2025)

by De Pitta, Maurizio

Dear colleagues, As the deadline for registrations approaches—and if you have not already registered—we kindly remind you to register for the very first EMBO Workshop on "Astrocytes: From Molecules to Systems" that will take place April 14-18, 2025 on the exclusive premises of the Venice International University on San Servolo Island. For your convenience, please find the link here: https://meetings.embo.org/event/25-astrocytes Registrations close January 14, 2025. We would also like to ask for your support by helping us spread the word to your students and colleagues via social media (X/Twitter/Bluesky, #EMBOastrocytes) and University/Institute official channels. I remain available for any questions. On behalf of the Organizing Committee, Sincerely, Maurizio De Pitta ----- Maurizio DE PITTA Principal Investigator Neuron-Glia Interactions Lab (NGILab) Krembil Research Institute, 4KD-509 60 Leonard Ave, Toronto, ON M5T 0S8, CA +1.416.603.5800 ext. 3290 This e-mail may contain confidential and/or privileged information for the sole use of the intended recipient. Any review or distribution by anyone other than the person for whom it was originally intended is strictly prohibited. If you have received this e-mail in error, please contact the sender and delete all copies. Opinions, conclusions or other information contained in this e-mail may not be that of the organization. If you feel you have received an email from UHN of a commercial nature and would like to be removed from the sender's mailing list please do one of the following: (1) Follow any unsubscribe process the sender has included in their email (2) Where no unsubscribe process has been included, reply to the sender and type "unsubscribe" in the subject line. If you require additional information please go to our UHN Newsletters and Mailing Lists page. Please note that we are unable to automatically unsubscribe individuals from all UHN mailing lists. Patient Consent for Email: UHN patients may provide their consent to communicate with UHN about their care using email. All electronic communication carries some risk. Please visit the UHN website and search “Using email to Communicate with Your UHN Health Care Team” to learn about the risks of electronic communication and how to protect your privacy. You may withdraw your consent to receive emails from UHN at any time. Please contact your care provider, if you do not wish to receive emails from UHN.

Jan. 10, 2025