July 2023 - Comp-neuro - lists.cnsorg.org

Faculty position at Cold Spring Harbor Laboratory in computational neuroscience

by Benjamin Cowley

Hi all, Cold Spring Harbor Laboratory has an open search for a faculty position in computational/neuroAI/theoretical neuroscience. Application deadline is Sept 1., 2023 (but the earlier the better!). https://www.cshl.edu/about-us/careers/faculty-positions/ CSHL is rather different from traditional research universities --- it's a highly interactive community with a pure focus on research (no teaching requirements). Please reach out if you have any questions! Job description below. Best, Ben Cowley Cold Spring Harbor Laboratory (CSHL) is seeking to fill a faculty position in the area of Computational/Theoretical Neuroscience. Of particular interest to this search are candidates with expertise in computational and theoretical neuroscience, machine learning, and artificial intelligence. The successful candidate will have an outstanding record of research achievement and an innovative research program. They will join a highly interactive and collaborative neuroscience group working on neural circuits, neural development, neurogenetics, theoretical and computational neuroscience, artificial intelligence, synaptic function, brain disorders, rodent cognition, perception, and social behavior. Preference will be given to applicants at the Assistant Professor level, but outstanding candidates at all career stages will be considered. Cold Spring Harbor Laboratory is a world-renowned research and educational institution with programs in cancer, neuroscience, plant biology, genomics, and quantitative biology. Located on the North Shore of Long Island 30 miles from New York City, the Laboratory has a rich and successful research environment rooted in interdisciplinary collaboration as well as an innovative graduate school that attracts talented students each year. CSHL is committed to fostering a diverse work environment that values best practices in mentorship, equity, and inclusion. Successful candidates will be expected to establish productive research programs while mentoring diverse groups of students and postdocs. Applications are strongly encouraged from groups historically underrepresented in science, including women and U.S. racial/ethnic minority populations. To apply, please submit a cover letter, CV, description of research accomplishments, statement of future research plans, statement of diversity and mentoring, and a completed application form via: https://apply.interfolio.com/127947 Position ID 119074. The statement of diversity and mentoring should describe a candidate’s mentoring philosophy, contributions to equity and inclusion in science, and prior training (as applicable) in mentoring, academic management/leadership, and antidiscrimination/antiracism. Contact information only for three references will be required; the reference letters will be requested separately by CSHL. We will consider applications on a rolling basis beginning July 10, 2023, and deadline for applications is September 1, 2023. Inquiries regarding the search should be directed to: CSHLfacultyjobs(a)cshl.edu

July 14, 2023

Workshop at CNS2023: Neuroscience Gateway Enabling Neuroscience Software Dissemination and Large-Scale Neuronal Modeling and Data Processing on Supercomputers

by Majumdar, Amitava

Please join us at the workshop titled: "Neuroscience Gateway Enabling Neuroscience Software Dissemination and Large-Scale Neuronal Modeling and Data Processing on Supercomputers " at CNS 2023, on July 19th, 2023, in Leipzig, Germany. Speakers include neuroscientists who are using the Neuroscience Gateway as well as Software developers whose software is disseminated via the Neuroscience Gateway. Detailed description of the workshop with list of speakers, title and abstract of the talks are available here: https://www.nsgportal.org/CNS2023NSGWorkshopWebPage.htm Best regards. Workshop Organizers Amit Majumdar, Subha Sivagnanam, Kenneth Yoshimoto, San Diego Supercomputer Center, University of California San Diego Ted Carnevale, Yale University

July 14, 2023

Professorship (W3) for “Computational Cognitive Science” at Technical University of Darmstadt, Center for Artificial Intelligence & Centre for Cognitive Science

by Constantin Rothkopf

The Department of Human Sciences at the Technical University of Darmstadt invites applications for the position of a Professorship (W3) for “Computational Cognitive Science” starting as soon as possible. The position holder will be a member of the Hessian Center for Artificial Intelligence - hessian.AI ( https://hessian.ai/) and provides research at the Center and will also be a member of the Centre for Cognitive Science ( https://www.cogsci.tu-darmstadt.de/) We are looking for an outstanding scientist who will represent the topic area of Computational Cognitive Science in research and teaching. The scientific focus of the position is on the computational and algorithmic modeling of behavioral data to understand the human mind. Exemplary research topics include, but are not limited to: + computational level models of perception, cognition, decision making, action, and learning as well as extended behavior and social interactions in humans, + algorithmic models that are able to simulate, predict, and explain human behavior, + model-driven behavioral research on human cognition. Successful candidates should demonstrate an outstanding scientific profile, with high-impact research contributions in the area of computational modeling of human behavior. A research profile that is able to interact with current developments in machine learning and artificial intelligence is desired. Candidates are expected to teach these topics in our undergraduate as well as graduate-level programs in Cognitive Science. Furthermore, a proven track record of successful collaboration in international research teams, with industry, or across research disciplines is a plus. The professorship is expected to strengthen the Hessian Center for Artificial Intelligence and TU Darmstadt’s Human Science department’s research focus on Cognitive Science, which belongs to one of the three distinguished research fields of Technical University of Darmstadt (Information + Intelligence). The current faculty at both the Hessian Center for Artificial Intelligence and the Centre for Cognitive Science maintain numerous vibrant collaborations and are jointly involved in several cluster projects, including “The third Wave of AI” and “The Adaptive Mind”. Depending on the candidate’s profile there is the opportunity to participate in joint research projects currently running at TU Darmstadt. This in particular includes the state funded cluster projects “The Adaptive Mind (TAM)” ( https://www.theadaptivemind.de/) and “The Third Wave of Artificial Intelligence (3AI)” ( https://hessian.ai/projects/3ai-the-third-wave-of-ai/) In addition to excellent scientific credentials, we seek a strong commitment to teaching in the department’s Bachelor and Masters programs in Cognitive Science. Experience in attracting third-party funding as well as participation in academic governance is expected. Technical University of Darmstadt is an autonomous university with broad excellence in research, an interdisciplinary profile, and clear focus areas in engineering sciences and information and communication technology. The professorship is a full professorship on a permanent basis. A prerequisite for applying is that additional academic achievements must be present; in general, the doctorate should be more than three years old at the time of application. The position will be remunerated in line with the German “W-Besoldung” and subject to negotiations between the applicant and the university management in accordance with his/her experience and qualifications. The regulations for employment are specified under §§ 67 and 68 HessHG (Hessisches Hochschulgesetz). Technical University of Darmstadt intends to increase the number of female employees and encourages female candidates to apply. In case of equal qualifications, applicants with a degree of disability of at least 50 or equal will be given preference. Technical University of Darmstadt is certified as a family-friendly university and offers a dual career program. Please submit applications with the usual attachments (CV including research and teaching achievements, list of publications, scans/copies of diplomas) as well as a research and teaching statement, quoting the code number 380, to the Chair of the Department of Human Sciences, Prof. Dr. Josef Wiemeyer (dekanat(a)humanw.tu-darmstadt.de) For further information or questions please contact Prof. Constantin Rothkopf, PhD, email constantin.rothkopf(a)tu-darmstadt.de. By submitting your application, you agree that your data may be stored and processed for the purpose of filling the vacancy. You can find our privacy policy on our webpage. Application deadline: October 1st, 2023.

July 13, 2023

CARLsim 6.1 Spiking Neural Network Simulator Release Introduces Axonal Plasticity

by Jeffrey L Krichmar

Dear Colleagues, We are pleased to announce the 6.1 release of CARLsim. CARLsim is an efficient, easy-to-use, GPU-accelerated library for simulating large-scale spiking neural network (SNN) models with a high degree of biological detail. CARLsim allows execution of networks of Izhikevich spiking neurons with realistic synaptic dynamics on both generic x86 CPUs and standard off-the-shelf GPUs. The simulator provides a PyNN-like programming interface in C/C++, which allows for details and parameters to be specified at the synapse, neuron, and network level. CARLsim, which is in its 6th major iteration, is open-source and publicly available. With the release of CARLsim 6.1, we introduce axonal plasticity to simulate the biological phenomenon of experience dependent plasticity to the conductance velocity of axonal signaling. Axonal plasticity appears to be important for synchronization, skill learning, and many other potential applications. More information about the implementation and an example application can be found in our recent IJCNN paper, "Experience-Dependent Axonal Plasticity in Large-Scale Spiking Neural Network Simulations", which can be found at: https://www.socsci.uci.edu/~jkrichma/CARLsim61-IJCNN2023.pdf CARLsim 6.1 is available on GitHub: https://github.com/UCI-CARL/CARLsim6 Best regards, Jeff Krichmar Department of Cognitive Sciences 2328 Social & Behavioral Sciences Gateway University of California, Irvine Irvine, CA 92697-5100 jkrichma(a)uci.edu http://www.socsci.uci.edu/~jkrichma https://www.penguinrandomhouse.com/books/716394/neurorobotics-by-tiffany-j-…

July 13, 2023

Call for Applications: Join the PLOS Complex Systems Editorial Board

by Hocine Cherifi

View this email in your browser <https://view.e.plos.org/?qs=6649e38711d4711c96cd7e869e54766a9daa683b66a5c2a…> [image: PLOS Complex Systems] <https://click.e.plos.org/?qs=579dc46496e4bc9e96d4e5d02cfb8efd0a166171d7b75d…> *Introducing our new journal **PLOS Complex Systems* *Learn more <https://click.e.plos.org/?qs=e2b3e6764225066938b02c620482dfff92f76aa0ce26be…>* *PLOS Complex Systems* will publish research of broad significance that untangles the complex systems at the heart of the world we live in. Open Science options at every stage of research communication facilitate new connections that inspire ideas and accelerate progress across disciplines while cross-fertilizing knowledge that enable solutions to fundamental challenges facing our society today. *Explore now* <https://click.e.plos.org/?qs=e2b3e6764225066938b02c620482dfff92f76aa0ce26be…> *Interested in joining the PLOS Complex Systems Editorial Board?* Are you a researcher who believes in breaking boundaries to advance science communication? That research should be open, transparent and fair? If so, you might be a fit for our Editorial Board. *Find out more <https://click.e.plos.org/?qs=e2b3e6764225066957c8972275e7a4bc811c051fda1c66…>* *Meet the Editor-in-Chief* [image: Hocine Cherifi] *Hocine Cherifi* Hocine Cherifi is a distinguished Full Professor of Computer Science at the University of Burgundy in Dijon, France. His primary research interests lie in the fields of Computer Vision Data Science and Complex Networks, and he has made significant contributions to his areas of expertise: as an author of over 250 scientific papers and conference proceedings, assuming leadership roles in more than 20 international conference organizations, and having served on over 100 program committees. *0000-0001-9124-4921* <https://click.e.plos.org/?qs=e2b3e67642250669054c3c2f989934906bf6ecbd83a2a3…> *Stay up-to-date* *Receive regular PLOS Complex Systems news and updates by signing up to our email list.* *Get updates <https://click.e.plos.org/?qs=e2b3e67642250669178bc3cc94ee091d549c4486538890…>*

July 13, 2023

Deadline approaching - Bernstein Conference 2023 in Berlin

by Alexander Lammers

***Deadline approaching - Bernstein Conference 2023 in Berlin*** ___ The Bernstein Conference Each year the Bernstein Network invites the international computational neuroscience community to the annual Bernstein Conference for intensive scientific exchange. It has established itself as one of the most renowned conferences worldwide in this field, attracting students, postdocs, and PIs from around the world to meet and discuss new scientific discoveries. www.bernstein-conference.de<http://www.bernstein-conference.de> ___ Important Dates * Abstract submission for posters: July 19, 2023, 15:00 CEST * Travel grant applications: July 19, 2023 * Early registration: July 19, 2023 * Bernstein Conference: September 26 - 29, 2023 ___ Registration Registration for the Bernstein Conference is open now. Register until July 19, 2023, and profit from reduced conference fees. All information: https://bernstein-network.de/bernstein-conference/registration/ ___ Abstract Submission We invite the computational neuroscience community to submit their abstracts. The abstract submission for posters is open until July 19, 2023, 15:00 CEST. All accepted abstracts will be published online and will be citable via Digital Object Identifiers (DOI). Abstract submission: https://bernstein-network.de/bernstein-conference/abstract-submission/ ___ Travel Grants Students, PhD candidates, and postdocs can apply for travel grants. Travel grant application: https://bernstein-network.de/bernstein-conference/early-career-scientists/t… ___ Invited Speaker Opening Lecture Marlene Cohen (University of Chicago, USA) Invited Talks Tiago Branco (Sainsbury Wellcome Center, UK) Stefano Fusi (Columbia University, USA) Ann Kennedy (Northwestern University, USA) Julija Krupic (University of Cambridge, UK) Wiktor Mlynarski (LMU Munich, Germany / Institute of Science and Technology, Austria) Adrien Peyrache (McGill University, Canada) Kanaka Rajan (Icahn School of Medicine at Mount Sinai, USA) Christopher Summerfield (University of Oxford and Deepmind, UK) Julia Veit (Albert-Ludwigs-Univesität Freiburg, Germany) ___ Conference Committee Robert Gütig (Conference Chair) Tatjana Tchumatchenko (Program Chair) Srdjan Ostojic (Program Vice Chair) Anna Levina (Workshop Chair) Maria Eckstein (Workshop Vice Chair) & Athena Akrami, Ann Hermundstad, Mehrdad Jazayeri, Christian Leibold, Ashok Litwin-Kumar, Ida Momennejad, Nicole Rust, Andrew Saxe, Daniela Vallentin, Friedemann Zenke. ___ Contact For any further questions, please contact: bernstein.conference(a)fz-juelich.de<mailto:bernstein.conference@fz-juelich.de> ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Juelich GmbH 52425 Juelich Sitz der Gesellschaft: Juelich Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Stefan Müller Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender), Karsten Beneke (stellv. Vorsitzender), Dr. Ir. Pieter Jansens, Prof. Dr. Astrid Lambrecht, Prof. Dr. Frauke Melchior ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------

July 13, 2023

CFP FRCCS 2024 Montpellier, France May 29 – 31, 2024

by Hocine Cherifi

Fourth* F*rench* R*egional* C*onference on* C*omplex* S*ystems May 29 – 31, 2024 Montpellier, France *FRCCS 2024* <https://iutdijon.u-bourgogne.fr/ccs-france/> After successfully hosting the conference in Dijon in 2021, Paris in 2022, and Le Havre in 2023, the fourth edition of the French Regional Conference on Complex Systems (FRCCS 2024) will be held in Montpellier, France. This international conference organized by CSS France <https://www.cssfrance.org/> serves as a platform to foster interdisciplinary exchanges among researchers from various scientific disciplines and diverse backgrounds, including sociology, economics, history, management, archaeology, geography, linguistics, statistics, mathematics, and computer science. FRCCS 2024 provides a valuable opportunity for participants to meet in France, exchange and promote ideas, facilitating the cross-fertilization of recent research work, industrial advancements, and original applications. Moreover, the conference emphasizes research topics with a high societal impact, showcasing the significance of complexity science in addressing complex societal challenges. Join us in Montpellier as we collectively strive to better understand complexity and its implications for society. You are cordially invited to submit your contribution until *February 21, 2024.* Finalized work (published or unpublished) and work in progress are welcome. Two types of contributions are accepted: · *Papers* about *original research* (up to 12 pages) · *Extended Abstract* about published or unpublished research (3 to 4 pages). *Publication* o Contributions will be included in the conference proceedings (With ISBN) o *Selected submissions of unpublished work will be invited for publication in special issues (fast track procedure) **of the journals:* o Applied Network Science, <https://appliednetsci.springeropen.com/> edited by Springer o Complexity, <https://www.hindawi.com/journals/complexity/?utm_source=google&utm_medium=c…> edited by Hindawi *Topics include, but are not limited to: * · *Foundations of complex systems * - Self-organization, non-linear dynamics, statistical physics, mathematical modeling and simulation, conceptual frameworks, ways of thinking, methodologies and methods, philosophy of complexity, knowledge systems, Complexity and information, Dynamics and self-organization, structure and dynamics at several scales, self-similarity, fractals - *Complex Networks * - Structure & Dynamics, Multilayer and Multiplex Networks, Adaptive Networks, Temporal Networks, Centrality, Patterns, Cliques, Communities, Epidemics, Rumors, Control, Synchronization, Reputation, Influence, Viral Marketing, Link Prediction, Network Visualization, Network Digging, Network Embedding & Learning. - *Neuroscience, **Linguistics* - Evolution of language, social consensus, artificial intelligence, cognitive processes & education, Narrative complexity - *Economics & Finance* - Game Theory, Stock Markets and Crises, Financial Systems, Risk Management, Globalization, Economics and Markets, Blockchain, Bitcoins, Markets and Employment - *Infrastructure, planning, and environment * - critical infrastructure, urban planning, mobility, transport and energy, smart cities, urban development, urban sciences - *Biological and (bio)medical complexity * - biological networks, systems biology, evolution, natural sciences, medicine and physiology, dynamics of biological coordination, aging - *Social complexity* o social networks, computational social sciences, socio-ecological systems, social groups, processes of change, social evolution, self-organization and democracy, socio-technical systems, collective intelligence, corporate and social structures and dynamics, organizational behavior and management, military and defense systems, social unrest, political networks, interactions between human and natural systems, diffusion/circulation of knowledge, diffusion of innovation - *Socio-Ecological Systems* - Global environmental change, green growth, sustainability & resilience, and culture - *Organisms and populations * - Population biology, collective behavior of animals, ecosystems, ecology, ecological networks, microbiome, speciation, evolution - *Engineering systems and systems of systems* - bioengineering, modified and hybrid biological organisms, multi-agent systems, artificial life, artificial intelligence, robots, communication networks, Internet, traffic systems, distributed control, resilience, artificial resilient systems, complex systems engineering, biologically inspired engineering, synthetic biology - *Complexity in physics and chemistry* - quantum computing, quantum synchronization, quantum chaos, random matrix theory) *GENERAL CHAIRS* Roberto Interdonato CIRAD, UMR TETIS, Montpellier Bruno Pinaud LABRI University of Bordeaux

July 12, 2023

CNS 2023 Workshop on Low-dimensional manifolds of neural dynamics

by Richard Gast

Dear members of the computational neuroscience community, If you are attending CNS 2023 this year and are interested in recent experimental and computational results on the relationship between behavior, neural computations, and low-dimensional neural dynamics, consider joining our workshop on "*Low-dimensional manifolds of neural dynamics and their role in brain function*" at the last day of the conference! Our line-up: - Juan Alvaro Gallego - Lea Duncker - Brian DePasquale - Bill Podlaski - Adrian Valente - Ann Kennedy More information can be found here: https://cns2023.sched.com/event/1Kd7M/w13-low-dimensional-manifolds-of-neur… We are looking forward to seeing you in Leipzig, Richard Gast and Helmut Schmidt -- *Richard Gast, PhD* Research associate at the Laboratory for Theoretical Neuroscience and Behavior Morton 5-630 Department of Neuroscience Feinberg School of Medicine Northwestern University phone: +18728026786 mail: richard.gast(a)northwestern.edu twitter: @rich_gast website: www.richardgast.me

July 12, 2023

CNS 2023 Tutorial on Dynamical Systems Methods in Neuroscience

by Richard Gast

Dear members of the computational neuroscience community, I would like to draw your attention to a tutorial that Hil G.E. Meijer, Bastian Pietras, and I will offer at the first day of CNS 2023: "T09 - Applied Dynamical Systems Methods in Neuroscience''. In this tutorial, we will explain basic dynamical systems concepts and analysis methods at the example of single neurons, neural networks, and mean-field equations of neural networks. The main goals of the tutorial are (i) to provide the audience with an intuition of how neural systems can be studied via mathematical models and dynamical systems concepts, (ii) to explain how we can analyze parameter dependencies of these mathematical models via parameter continuation and bifurcation analysis, and (iii) to provide numerical recipes, and software solutions to carry out these analysis methods. For more details on the tutorial, have a look at our website: https://cns2023.sched.com/event/cbd810bd0ffd6a59869a5f89fbf17b58 If you are planning to participate in the hands-on sessions, I advise you to follow the preparation instructions on that website! See you in Leipzig, -- *Richard Gast, PhD* Research associate at the Laboratory for Theoretical Neuroscience and Behavior Morton 5-630 Department of Neuroscience Feinberg School of Medicine Northwestern University phone: +18728026786 mail: richard.gast(a)northwestern.edu twitter: @rich_gast website: www.richardgast.me

July 12, 2023

CNS*2023 Tutorial: "Modeling astrocytes and neuron-astrocyte interactions"

by Giulio Bonifazi

Dear Colleagues, We are delighted to announce a full-day tutorial session on “Modeling astrocytes and neuron-astrocyte interactions" at the upcoming CNS*2023 meeting in Leipzig, Germany. This tutorial will cover a range of topics related to astrocyte modelling including calcium signaling, volume control, synaptic activity, and network-level interactions with neurons. Here are the details of our tutorial session: Title: "Modeling astrocytes and neuron-astrocyte interactions”. Date: Saturday, July 15th. Location: Schumann Room (Kongresshalle am Zoo). For more information about the speakers, sessions, and the exact schedule, please visit our tutorial website at https://sites.google.com/view/astrotutorial. If you plan to attend, please remember to select our tutorial from the virtual program guide on Sched at https://sched.co/1Kd3X (Tutorial session T04). Thank you for your attention, and we hope to see you in Leipzig! Best regards, Giulio Bonifazi Ph.D. Student University of the Basque Country (UPV/EHU) gbonifazi001(a)ikasle.ehu.eus <mailto:gbonifazi001@ikasle.ehu.eus>

July 12, 2023