November 2023 - Comp-neuro - lists.cnsorg.org

Postdoc position in Computational Neuroscience, RIKEN Center for Brain Science

by Taro Toyoizumi

Two postdoc positions are available at RIKEN Center for Brain Science, Japan, to work with Taro Toyoizumi on Computational/Theoretical Neuroscience. Our research is within the field of Computational Neuroscience. We utilize computer models to explore how information is processed in the brain and how the brain circuits adapt to the environment. Drawing on analytical techniques from statistical physics and information theory, we probe the key functional properties of neural circuits. We apply these techniques to distill diverse experimental findings into a few core concepts. We hold a particular interest in activity-dependent forms of plasticity in the brain, which exert significant influences on learning, memory, and development. Leveraging mathematical models, we aim to formulate a theory that bridges cellular-level plasticity rules and computation. The capacity of neurons to represent and retain information is gauged from the structure and behavior of resulting circuits. For additional details, refer to the lab’s webpage. https://toyoizumilab.riken.jp/ Details about the positions and the application procedure are described here: https://cbs.riken.jp/en/careers/20231102_w23191_t.toyoizumi_r.html https://cbs.riken.jp/en/careers/20231102_w23192_t.toyoizumi_r.html --- Taro Toyoizumi, Ph.D. Team Leader, RIKEN Center for Brain Science Laboratory for Neural Computation and Adaptation 2-1 Hirosawa, Wako, Saitama 351-0198, Japan https://toyoizumilab.riken.jp/

Nov. 7, 2023

Postdoc position in comp. neuroscience at the Kavli Institute for Systems Neuroscience, Trondheim

by Soledad Gonzalo Cogno

Dear all, My lab has an opening for a postdoc position. * The position is at the Kavli Institute for Systems Neuroscience (KISN, https://www.ntnu.edu/kavli) at the Norwegian University of Science and Technology (NTNU). The Centre for Algorithms in the Cortex is based at the KISN (https://www.ntnu.edu/kavli/centre-for-algorithms-in-the-cortex) and is a recently established centre of excellence funded for 10 years by the Research Council of Norway. We offer an international and multidisciplinary environment. * The position will be part of my group, and the project is in collaboration with the Moser lab (KISN). The position will be for 2 years. * The successful candidate will combine the analysis of large-scale neural population recordings obtained with Neuropixels probes (the data will be collected by other team members) with the development of computational models. * For more information and details about how to apply please see: https://www.jobbnorge.no/en/available-jobs/job/249793/postdoctoral-fellow * Deadline: December 1st. Finally, I will be at SfN, so if anyone wants to have a chat about the position, please let me know. Best, Soledad --- Soledad Gonzalo Cogno, PhD Group Leader Kavli Institute for Systems Neuroscience Olav Kyrres gate 9 7030 Trondheim, Norway

Nov. 6, 2023

TR: Master Internship

by DEPANNEMAECKER Damien

Hi, Could you distribute this announcement to your students? Thanks a lot! We are seeking 3 master's students to systematically evaluate Virtual Epilepsy Patients (VEP). The VEP workflow employs computational models and machine learning techniques to estimate epileptogenic networks and assist in surgical strategies. In this context, the computational models are personalized whole-brain network models based on the patient's recorded data. VEP represents the first well-established instance of applying the concept of virtual brain twins in a clinical trial, called Epinov. Our team is a world leader in advancing the concept of virtual brain twins. Three topics: 1. Systematic investigation of the sensitivity of the VEP in terms of electrode locations. 2. Systematic investigation of the robustness of the VEP in terms of data features. 3. Systematic investigation of the robustness of the VEP in terms of the size of the windows of seizure analysis. About the ideal candidates: * A strong grasp of mathematics, physics, neuroscience, and computer science, or a genuine enthusiasm for cultivating these skills, is essential. * The ability to quickly acquire proficiency in new computational tools is important, and we will offer comprehensive guidance to support your learning. * Proficiency in coding is a fundamental skill. * Ideally, you are a Master 2 student and would like to complete your 6-month internship in our laboratory. * An added advantage would be a strong motivation to pursue a career in scientific research and aspire to become a Ph.D. candidate. What you will gain at the end of the training (internship): 1. You will have a clear understanding of the concept of virtual brain twins and how to use personalized modeling for clinical applications. 2. You will acquire knowledge of computational modeling. 3. You will become familiar with the various multidisciplinary approaches and perspectives in mathematics, physics, neuroscience, computer science, and medicine. 4. You will develop the ability to conduct systematic analysis. 5. You will be proficient in using VEP pipelines, which integrate numerous analysis and data preprocessing tools and models, and you will also gain the capability to add additional modules. To apply, please send your CV with 2 reference letters and a cover letter to: Huifang Wang, huyfang.wang(a)univ-amu.fr<mailto:huyfang.wang@univ-amu.fr> and Damien Depannemaecker, damien.depannemaecker(a)univ-amu.fr<mailto:damien.DEPANNEMAECKER@univ-amu.fr>

Nov. 3, 2023

NEXTEN Conference

by Goodhill, Geoffrey

NEXTEN: Envisaging Theoretical and Computational Neuroscience for the next 10 years May 16-17, 2024 Washington University in St Louis nexten.wustl.edu Theoretical/Computational Neuroscience is currently undergoing a phase of unprecedented growth. Dramatic advances in the ease with which large-scale datasets of behavior, neural activity, connectomic and gene expression information can be collected have coincided with a revolution in the capabilities of Artificial Intelligence-based algorithms to interrogate such datasets. Concurrently, these new datasets are inspiring exciting new developments in mathematical tools for extracting their underlying structure and relationships. What is the current state of the art in our theoretical/computational understanding of the brain, and what does the future hold? You are invited to join an exciting line-up of leaders in the field to address these questions. Confirmed speakers include Adam Kepecs (WashU) Mackenzie Mathis (EPFL) Terry Sejnowski (Salk Institute) Andreas Tolias (Baylor College of Medicine) Richard Zemel (Columbia University) Abstract submissions for posters are encouraged, and some of these will be selected for short talks. Some travel awards will be available for qualified trainees. The conference is sponsored by the Center for Theoretical and Computational Neuroscience at Washington University in St Louis (ctcn.wustl.edu) It will be held in the new 600,000 sq ft Neuroscience Research Building on the WashU Medical School campus, into which ~100 neuroscience labs have recently moved. The deadline for registration and abstract submission is Wednesday, February 28, 2024. However, due to the size of the auditorium total registrations are limited to 150, and so registration may close earlier than Feb 28 if this limit is reached. Registration and abstract submission will open in January 2024. Please direct any questions to ctcn(a)wustl.edu Professor Geoffrey J Goodhill Departments of Developmental Biology and Neuroscience Director, Center for Theoretical and Computational Neuroscience (ctcn.wustl.edu) Washington University School of Medicine 660 S. Euclid Avenue St. Louis, MO 63110 g.goodhill(a)wustl.edu https://neuroscience.wustl.edu/people/geoffrey-goodhill-phd

Nov. 3, 2023

Pre- or post-doc position available at the Austrian Academy of Sciences in Vienna

by Robert Baumgartner

Dear colleagues, I am currently looking for an enthusiastic researcher to join a highly interdisciplinary team investigating „Dynamic Auditory Predictions in Human and Non-human Primates (Dynamates <https://www.oeaw.ac.at/en/ari/dynamates>)". The project rests on a strong collaboration between cognitive neuroscience, cognitive biology, and computational modeling. The candidate’s main task will be to perform cutting-edge model-based analyses of neurobehavioural data (psychophysics + EEG + eyetracking) that we already collected. The position is to be filled for one year and is available immediately, but open until a suitable candidate is found (1st round of evaluation will start on Nov 22). For pre-doc applications, all details can be found here: https://www.oeaw.ac.at/en/ari/ari/about-ari/news-1/project-scientist-positi… For post-doc applications, follow this link instead: https://www.oeaw.ac.at/en/ari/ari/about-ari/news-1/postdoc-position-f-m-x-f… Please distribute and don’t hesitate to contact me if you have any questions about this position! Very best, Robert — Robert Baumgartner, PhD Senior Research Associate Auditory Cognitive Neuroscience Institut für Schallforschung | Acoustics Research Institute Österreichische Akademie der Wissenschaften | Austrian Academy of Sciences Wohllebengasse 12-14, 1040 Wien, Österreich | Vienna, Austria

Nov. 3, 2023

Faculty opening in Georgia Tech ECE

by Rozell, Christopher J

Hello Comp Neuro! Please share this widely. Georgia Tech’s School of Electrical and Computer engineering (ECE) is hiring faculty in bioengineering with a preference for candidates aligned with an emerging institute for neuroscience, neurotech and society: https://b.gatech.edu/3QIvgnZ. Application review starts Dec 15. The job ad is here: https://bit.ly/3QIUaU8 Even if you're not a traditional ECE, consider applying if you work in topics such as neuroengineering or computational neuroscience. The search is open to all areas, including biosensing, bioelectronic interfacing, imaging, biomedical data analysis and computational modeling. The neuro community in ATL is incredible, combining cutting edge interdisciplinary research with a highly collaborative and friendly culture. There’s a particularly strong computational neuroscience community here. GT is making major investments in growing neuro, and plans to launch a novel PhD program in Neuroscience & Neurotechnology next year. ECE at GT has a long history of applying engineering principles to biotech problems. Faculty share strong collaborations with colleagues developing cutting edge foundational technologies and local clinical partners (e.g., Schools of Medicine at Emory University and Morehouse). Overall, I love working at GT (and especially ECE). Local colleagues are friendly and helpful. GT is ambitious, growing and supportive. Collaboration opportunities are abundant. And the technical expertise is top shelf....there are local experts in any area you need. I also love living in ATL. It is a diverse and vibrant city full of distinct neighborhoods. It's affordable and an easy travel hub. It's a green city that's great for outdoor activity. The food and arts culture is quite good. The weather is temperate much of the year. Come be my colleague! I'm happy to answer any questions. Share with anyone who might be interested. Regards, chris

Nov. 2, 2023

Postdoctoral Research Position at the Australian National University

by Michael McCullough

Jubilee Joint Associate (Postdoctoral Research Fellow) in Computational Neuroscience and AI @ The Australian National University To apply visit: https://jobs.anu.edu.au/jobs/jubilee-joint-associate-postdoctoral-research-… The John Curtin School of Medical Research and the School of Computing at the Australian National University are seeking a Postdoctoral Research Fellow for joint appointment of up to 3 years to work in the areas of computational neuroscience and artificial intelligence. The successful candidate will hold the title of Jubilee Joint Associate and work under the supervision of Jubilee Joint Fellow Dr Michael McCullough in the Computational Neuroscience Group within the Eccles Institute of Neuroscience and Computational Science Cluster within the School of Computing. The Jubilee Joint Associate will undertake independent research within one or more of the following themes: * Topological structures and dynamics of brain activity on neural manifolds. * Network neuroscience and the brain as a complex system. * Computational ethology and modelling behavioural sequences. This is an exciting opportunity to start building research independence, work at the interface of two rapidly evolving fields, and collaborate with leading experts in neuroscience, biomedicine and computer science. For further information, please contact Dr Michael McCullough at michael.mccullough(a)anu.edu.au About You Our ideal candidate will have completed a PhD (or is expecting to be awarded a PhD within six months of appointment commencement) in computational neuroscience, computer science, mathematics, physics, or equivalent qualifications and experience in a related area. Applicants should have an emerging track record of research in the fields of computational neuroscience, artificial intelligence, computational biology or complex systems as evidenced by peer-reviewed publications and conference presentations. Experience in student supervision and mentoring is desirable but not essential. About the John Curtin School of Medical Research The John Curtin School of Medical Research is a leading centre of medical research in Australia. Researchers have a tradition of excellence in addressing the world’s most pressing biomedical issues. The Eccles Institute of Neuroscience is an internationally recognised research institute based in the John Curtin School of Medical Research dedicated to understanding the brain and nervous system. The Institute is home to a diverse community of independent research groups, with a focus on cellular and synaptic physiology, sensory physiology, retina, and muscle. About the School of Computing The School of Computing has a strong foundation in computing and information sciences at ANU. We are a transformative centre for research in artificial intelligence and machine learning, computer systems and software, and theoretical foundations of computing. We span traditional and modern thinking, connecting decades of computer science methodologies with modern data and computational science. Our mission is motivated by the need to design, drive and sustain strategic activities via five broad focus areas: Computing Foundations, Computational Science, Intelligent Systems, Data Science and Analytics, and the Software Innovation Institute. Be part of an innovative and forward-looking intellectual agenda, built on a diverse, inclusive culture. The ANU provides attractive benefits and excellent support to maintain a healthy work/life balance and offers generous remuneration benefits, including four weeks paid vacation per year, assistance with relocation expenses and 17% employer contribution to superannuation. This also includes generous parental leave, the possibility of flexible and part time working arrangements, a parental and aged care support program, dual career hire programs, ANU school holiday programs, and childcare facilities on campus. For more information, visit: https://services.anu.edu.au/human-resources Applicant Information In order to apply for this role you will need to upload the following documents via the ANU Jobs portal with your application: A detailed curriculum vitae (CV) including a full publication list and the names and contact details of at least three referees (preferably including a current or previous supervisor). If your CV does not include referees, you can complete these online when prompted in the application form. A statement addressing the selection criteria. A 1-2 page statement outlining a proposed research project. --- Michael H McCullough, PhD [he/him/his] Jubilee Joint Fellow School of Computing & Eccles Institute of Neuroscience, John Curtin School of Medical Research The Australian National University Canberra ACT 2600

Nov. 1, 2023