April 2021 - Comp-neuro - lists.cnsorg.org

NIH-funded course on multiscale modeling of brain circuits using NetPyNE/NEURON

by Salvador Dura

Would you like to build a model of brain circuits but don’t know where to start? Want to test a hypothesis or find an explanation for your experimental observations? Our online hands-on course (May 17 to June 1, 2021) will provide you an accelerated introduction to theory, methods, and tools to build brain circuit models at multiple scales (molecular, cellular, network, system, behavior) using the NetPyNE<http://netpyne.org/> and NEURON tools. Our tutors will then work closely with you to help you develop your own model. See all the details and how to apply here: http://dura-bernal.org/netpyne-course-2021

April 11, 2021

New FRONTIERS TOPIC: Memory Processes in Medial Temporal Lobe: Experimental, Theoretical and Computational Approaches

by Vassilis Cutsuridis

Dear colleagues, please consider submitting to the new Frontiers Topic in Systems Neuroscience: https://www.frontiersin.org/research-topics/20768/memory-processes-in-media… Regards, --- Vassilis Cutsuridis, PhD, M.Sc, M.A. Senior Lecturer School of Computer Science University of Lincoln UK Tel: +44 (0) 1522 83 5701 Email: vcutsuridis(a)lincoln.ac.uk Web:http://staff.lincoln.ac.uk/vcutsuridis Personal website:http://www.vassiliscutsuridis.org/ "The greatest threat to our planet is the belief that someone else will save it" - Robert Swan "The important thing in science is not so much to obtain new facts as to discover new ways of thinking about them" — Sir William Lawrence Bragg, 1890–1971

April 10, 2021

Assistant Professor Position in Cognitive Neurosciences of Language - University of Geneva Switzerland

by Narly Golestani

Dear all, An Assistant Professor Position in Cognitive Neuroscience of Language is available at the University of Geneva, Switzerland. The position will be in the Psychology section of the Faculty of Psychology and Education Science https://www.unige.ch/fapse/, with access to Campus Biotech Facilities "https://www.campusbiotech.ch/en/node/320". This position is opened in the context of the NCCR (National Center of Research Competence) "Evolving Language" - http://www.snf.ch/en/researchinFocus/nccr/evolving-language/Pages/default.a…. The whole application process can be carried in English. It is required that the successful candidate acquire a working command of French within the first two years in the position. The application deadline is on May 19th, 2021 - please see https://jobs.unige.ch/www/wd_portal.show_job?p_web_site_id=1&p_web_page_id=… for more information. We would be most thankful if you could distribute widely. Thanks in advance, and best wishes, Narly Golestani. ----------------------------------------------------------------------------------------------------------------------------------------------------------------- Brain and Language Lab Prof. Narly GOLESTANI Department of Psychology Campus Biotech 9 Chemin des Mines, 1202 Genève +41 22 379 53 52 <https://outlook.unige.ch/owa/redir.aspx?SURL=5WTo-p-J-W9FrDydU-0WU4PdMytUGs…>http://www.brainandlanguagelab.org https://twitter.com/brain_lang_lab ----------------------------------------------------------------------------------------------------------------------------------------------------------------- <https://outlook.unige.ch/owa/redir.aspx?SURL=5WTo-p-J-W9FrDydU-0WU4PdMytUGs…>

April 9, 2021

2y PostDoc position on EEG analysis in Scuola Superiore Sant'Anna, Italy

by Alberto Mazzoni

Dear all, I am looking with Prof. Silvestro Micera for a motivated postdoc with previous experience in EEG analysis for a 2y contract in the neural engineering area of the Institute of Biorobotics of the Scuola Superiore Sant Anna https://www.santannapisa.it/en/computational-neuroengineering-laboratory https://www.santannapisa.it/en/institute/biorobotics/translational-neural-e… Projects include Alzheimer diagnostics, robotic rehabilitation, neuroprosthetics, Impulse Control Disorders in Parkinson. Last but not least, Tuscany is a great place to live! Please spread the voice and contact me if interested. Thanks, best Alberto Mazzoni

April 9, 2021

New FRONTIERS TOPIC: BRAIN CONNECTIVITY, DYNAMICS AND COMPLEXITY

by Stephen José Hanson

Please considering submitting to the new Frontiers Topic in Human Neuroscience: https://www.frontiersin.org/research-topics/20807/brain-connectivity-dynami… -- Stephen José Hanson Professor Director RUBIC (University- Wide) Department of Psychology (NK) Cognitive Science Center (NB)

April 9, 2021

[CFP] MDPI Molecules (IF: 3.267, ISSN: 1420-3049) - Special Issue "Practical Aspects of Molecular Communications"

by Murat Kuşcu

MDPI Molecules (IF: 3.267, ISSN: 1420-3049) Special Issue on Practical Aspects of Molecular Communications https://www.mdpi.com/journal/molecules/special_issues/molecular_communicati… --------------------------- CALL FOR PAPERS The Internet of Bio-Nano Things (IoBNT) is an emerging technology that aims to extend our connectivity to nanoscale and biological environments with collaborative nanonetworks of artificial nanomachines and biological entities integrated into the Internet infrastructure. To enable the IoBNT and its groundbreaking applications, such as continuous intrabody health monitoring, it is imperative to devise low-complexity nanoscale communication techniques suitable for the envisioned nanomachines of simple architectures. The most promising communication technology for realizing the IoBNT is Molecular Communications (MC), as it ubiquitously manifests itself in many complex biological systems in the Universe, and thus, stands as one of the most common communication modalities, optimized from many aspects as a result of billions of years of evolutionary advancement. Making use of this naturally existing technology requires understanding its foundations through our existing modeling and analysis tools. This quest, which started almost 15 years ago, has received increasing attention from ICT researchers, which have been overly inspired by conventional electromagnetic communication technologies in their approach to this radically different paradigm. These theoretical approaches, however, have not always come with sufficient physical relevance. Currently, this emerging field has come to a critical turning point, as many researchers have started to report on initial MC experiments following different approaches and using different materials, while consistently pointing out a discrepancy between the obtained experimental results and the past theoretical work. This reveals the need to rethink the previous efforts and come up with new interdisciplinary strategies, thus building practical MC techniques and developing feasible MC system components, experimental testbeds, and prototypes in order to close the gap between theory and practice, and expedite the transfer of this emerging technology to the market. Among the challenges stated above, this Special Issue is particularly focused on the practical aspects of MC. Therefore, we are calling for technical papers that report on new research with the potential to move this field forward towards its practical applications, as well as surveys/tutorials focusing on the practical challenges of MC research. Hence, its scope encompasses a wide range of interdisciplinary research topics, with some examples listed as follows: ** The physical design, modeling, and implementation of MC system components (e.g., transmitter, receiver, channel); ** The design and implementation of MC testbeds; ** Practical and low-complexity MC methods (e.g., modulation, detection, channel estimation, synchronization, coding methods); ** The testing and validation of MC transceiver/channel models and MC methods; ** Applications of microfluidics, biosensors, and nanomaterials for MC system design; ** Bio-cyber interfaces between MC networks and conventional macroscale networks; ** Synthetic biology-based MC transceiver architectures; ** Optimization of ligand-receptor interactions for MC; ** Biocompatibility and co-existence challenges; ** Energy harvesting and power transfer techniques for MC networks; ** The design and demonstration of MC applications (e.g., those in healthcare, agriculture, biocomputing). --------------------------- Deadline for manuscript submissions: 15 September 2021 --------------------------- Guest Editors Sasitharan Balasubramaniam, TSSG/Walton Institute, Waterford Institute of Technology (sasib(a)tssg.org) Murat Kuscu, Koc University, Turkey (mkuscu(a)ku.edu.tr) Bige D. Unluturk, Michigan State University, USA (unluturk(a)msu.edu) Kerstin Lenk, Graz University of Technology, Austria (kerstin.lenk(a)tugraz.at ) Ergin Dinc, University of Cambridge, UK (ed502(a)cam.ac.uk) Michael Barros, University of Essex, UK (m.barros(a)essex.ac.uk) --------------------------- Paper submission Manuscripts should be submitted online at www.mdpi.com by registering and logging in to this website. Manuscripts can be submitted until the deadline. All papers will be peer-reviewed. Accepted papers will be published continuously in the journal (as soon as accepted) and will be listed together on the special issue website. Research articles, review articles as well as short communications are invited. For planned papers, a title and short abstract (about 100 words) can be sent to the Editorial Office for announcement on this website. Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are thoroughly refereed through a single-blind peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page. Molecules is an international peer-reviewed open access semimonthly journal published by MDPI. Please visit the Instructions for Authors page before submitting a manuscript. The Article Processing Charge (APC) for publication in this open access journal is 2000 CHF (Swiss Francs). Submitted papers should be well formatted and use good English. Authors may use MDPI's English editing service prior to publication or during author revisions. --------------------------- Additional information: Please visit the MDPI Molecules Special Issue webpage at: https://www.mdpi.com/journal/molecules/special_issues/molecular_communicati… Inquiries can be addressed to Ms. Emity Wang at: emity.wang(a)mdpi.com, molecules(a)mdpi.com

April 9, 2021

Reader/Principal Lecturer in Artificial Intelligence at the University of Hertfordshire

by Volker Steuber

Reader/Principal Lecturer in Computer Science (Artificial Intelligence) School of Physics Engineering and Computer Science/ Department of Computer Science University of Hertfordshire, Hatfield, UK FTE: Full time position working 37 hours per week (1.0 FTE) Duration of Contract: Permanent Salary: UH9 £51,034 - £60,905 pa dependent on relevant skills and experience Closing date: 9 May 2021 Applications are invited for an academic position as Reader/Principal Lecturer in the Department of Computer Science, University of Hertfordshire. The Department has an international reputation for teaching and research, with 64 academic staff, 40 adjunct lecturer staff, and 65 research students and postdoctoral research staff. With a history going back to 1958, the Department teaches one of the largest cohorts of undergraduate students in the UK, and also delivers a thriving online computer science degree programme. Main duties and responsibilities The person appointed will be expected to make a significant contribution to the leadership of research in the department, including gaining research awards as Principal Investigator, the development of the research environment in the department and across the University, and publishing in peer reviewed journal articles and other internationally excellent or world-leading publications in education. To contribute to the development of, and supervise and teach on, doctoral programmes in the UK and internationally in relation to a wide spectrum of AI, especially emerging topics in AI. Possible fields include, but are not limited to: • Machine learning: reinforcement learning, Deep Methods, statistical methods, large scale data modelling/intelligent processing and high-performance learning algorithms • Robotics: embodied and/or cognitive robotics, HRI, robot safety, emotional/social robots, smart homes and sensors, sensor fusion, assistive robotics, soft robotics, adaptive or evolutionary robotic design • Biological and biophysical computation paradigms, systems biology, neural computation • Complex Systems: collective intelligence, adaptive, autonomous and multi-agent/robot systems, collective and swarm intelligence, social and market modelling, adaptive, evolutionary and unconventional computation • Mathematical Modelling: statistical modelling, information-theoretic methods, compressive sensing, intelligent data visualization, multiscale models, optimization; causality • Emerging Topics in AI: computer algebra and AI, topological methods (e.g. persistent homology), algebraic and category-theoretical methods in AI; modern topics in games and AI; quantum algorithms for AI • AI and applications: financial modelling, AI and biology/physics/cognitive sciences • Foundations: fundamental questions of intelligence and computation, emergence of life/intelligence, Artificial Life Preference will be given to candidates that can deliver teaching to Level 7 in a selection of relevant subjects. The appointee will also be expected to lead and develop taught modules in a range of computer science areas. For appointees with the appropriate experience, there will be the possibility of taking up the role of Head of Subject Group within the department of Computer Science. Skills and experience The appointee will strengthen the research culture in the Department by pursuing research as part of a larger research team, seeking external funding, publishing papers, supervising research students, and participating in commercial activity as appropriate. Therefore it is essential that candidates have a track record (e.g. in published, grant-funded research) in Computer Science. Additionally, experience of different types of assessment and higher education quality assurance is an essential requirement of this role. Prior experience of developing modules and/or programmes of study in Computer Science is essential in addition to significant experience of operating in a UK HE Environment, or equivalent professional experience. Readers/Principal lecturers are expected to take on duties in the capacity of leader, and hence experience of academic leader, programme leadership and line management is desirable. Good interpersonal and presentation skills with proficiency in the English Language are essential along with the ability to manage conflicting demands and work to deadlines. Qualifications required Reader/Principal Lecturer applicants must hold a First Degree and a PhD in an appropriate area of Computer Science or an equivalent, relevant postgraduate professional qualifications. In addition, the Reader/Principal Lecturer will be expected to contribute to the leadership and management academic programmes, as well as proactive participation in enterprise, knowledge transfer and/or research and scholarship in the School. There are expectations of leadership and potentially supervisory oversight of groups of staff. Readers/Principal lecturers are also expected to contribute to the richness of the academic environment, through scholarly activity, support events, projects and activities, including open days, outreach, extra curricula initiatives, and potentially act as a representative of the School or University at national or international fora. The School of Physics, Engineering and Computer Science is an Athena Swan Bronze award holder, and we are committed to providing a supportive environment and flexible working arrangements. The university also provides an onsite childcare facility and child-centred holiday clubs. Staff work with the university values, which are: Friendly, Ambitious, Collegial, Enterprising, and Student focused. Contact Details/Informal Enquiries: Informal enquiries may be addressed to Dr Simon Trainis, Head, Department of Computer Science by email: S.A.Trainis(a)herts.ac.uk Please note that applications sent directly to this email address will not be accepted. Closing Date: 9 May 2021 Interview Dates: TBC but candidates are advised to be available on 16 and 17 June 2021 Apply through https://www.herts.ac.uk/staff/careers-at-herts, Reference Number: 032595 Date Advert Placed: 8 April 2021 Volker Steuber Professor of Computational Neuroscience Biocomputation Research Group School of Physics, Engineering and Computer Science University of Hertfordshire College Lane, Hatfield, AL10 9AB, UK +44 (0)1707 284350 biocomputation.herts.ac.uk<http://biocomputation.herts.ac.uk>

April 9, 2021

PhD position in computational neuroscience and modeling of salamander spinal locomotor circuits, EPFL, Lausanne Switzerland

by Auke Ijspeert

The Biorobotics laboratory (Biorob, https://www.epfl.ch/labs/biorob/ <https://www.epfl.ch/labs/biorob>) at EPFL (Lausanne, Switzerland) has one open *PhD student position* in *computational neuroscience and modeling of salamander spinal locomotor circuits*. The position is part of the ERC Synergy Salamandra project that will start in September 2021, together with Prof. Andras Simon (KTH Sweden) and Prof. Dimitri Ryczko (U. Sherbrooke, Canada). See some info here: https://actu.epfl.ch/news/salamanders-provide-a-model-for-spinal-cord-rege-… The goals of the position are (i) to develop numerical models and simulations of the locomotor circuits in the spinal cord of the salamander, (ii) to analyze their dynamics when coupled to a simulated mechanical model of the body (interactions between central and peripheral mechanisms), and (iii) to investigate their regenerative properties after spinal cord lesions. The models will be based on integrate-and-fire neuron models. The positions are fully funded for 4 years. EPFL is one of the leading Institutes of Technology in Europe and offers extremely competitive salaries and research infrastructure. *Requirements:* Candidates need to have a Master degree in a field related to computational neuroscience, e.g. in computer science, neuroscience, or physics. The ideal candidate for this position should have a strong numerical modeling background, good programming skills, good math background (e.g. in dynamical systems), and interest in locomotion and robotics. *How to apply for the position:* Step 1: The position is only open to applicants who have been accepted by the EPFL doctoral school (see http://phd.epfl.ch/ <http://phd.epfl.ch/>). The first step is therefore to fill the applications for one of the relevant EPFL doctoral programs in neuroscience, or related fields (e.g. computer science or robotics). Step 2: In parallel to step 1, or once accepted by one of the doctoral programs (please specify which doctoral program and the date of acceptance), the application to the position should be sent by email to Prof. Auke Ijspeert and consist of a motivation letter (explaining why you are interested in the project, and why you feel qualified for it) and a copy of the doctoral program application. Informal inquiries about the relevance of an application can be sent to auke.ijspeert(a)epfl.ch <mailto:auke.ijspeert@epfl.ch> (e.g. before or while submitting an application to the doctoral school), but responses can be slow because of a heavy schedule and a filled mail box. *Deadline and starting date:* *The ideal starting date is September 2021* (with some flexibility). Applications will be considered starting *from May 31 2021*, and then continuously until the positions are filled. *Instructions to apply* can be found here: https://www.epfl.ch/labs/biorob/openings/ Best regards, Auke Ijspeert -- ----------------------------------------------------------------- Prof Auke Jan Ijspeert Biorobotics Laboratory EPFL-STI-IBI-BIOROB, ME D1 1226, Station 9 EPFL, Ecole Polytechnique Fédérale de Lausanne CH 1015 Lausanne, Switzerland Office: ME D1 1226 Tel: +41 21 693 2658 Fax: +41 21 693 3705 www:http://biorob.epfl.ch Email:Auke.Ijspeert@epfl.ch -----------------------------------------------------------------

April 8, 2021

New Online Master Program for Cognitive Science M.Sc.

by mcruz＠uni-osnabrueck.de

Dear all, We are very excited to announce that the Institute of Cognitive Science at Osnabrück University will offer a new digital track of the Cognitive Science M.Sc. program! The DAAD-funded program targets international students who can successfully complete most of the coursework remotely. Possible focus areas include Artificial Intelligence, Neuroinformatics, and Neuroscience. In addition to the online coursework, students will be present in Osnabrück for 2-3 weeks every academic year. During this period, students will be able to get to know one another and participate in courses and face-to-face exams. This also gives students a chance to get to know the city of Osnabrück, learn about German culture, and gain insight into the work-life in Germany through possible internships and company visits. The program will be open for applications soon - check out our website (https://www.ikw.uni-osnabrueck.de/en/courses_of_study/master_program/cognit…) for more details. Please do not hesitate to contact us (os-cosmos(a)uni-osnabrueck.de) with further inquiries! We look forward to hearing from you. Best wishes, Misha Cruz Wissenschaftliche Mitarbeiterin OS-COSMOS mishael.g.cruz(a)uni-osnabrueck.de Institut für Kognitionswissenschaften und virtUOS Universität Osnabrück Misha Cruz Wissenschaftliche Mitarbeiterin OS-COSMOS mishael.g.cruz(a)uni-osnabrueck.de Institut für Kognitionswissenschaften und virtUOS Universität Osnabrück

April 8, 2021

2 postdoc positions at the Perception, Neuroimaging, and Modeling lab at Georgia Tech

by Xue, Kai

Hi all, The Perception, Neuroimaging, and Modeling lab (PI: Dr. Doby Rahnev, rahnevlab.gatech.edu) has two postdoctoral fellow openings to work on funded projects. The exact topic of research is flexible and could include investigating the neural and/or computational bases of perception, memory, metacognition, attention, expectation, learning, cognitive control, working memory, etc. The Rahnev lab uses a wide range of methods such as fMRI, TMS, psychophysics, computational modeling and concurrent TMS-fMRI. The position is initially for 2 years with a possibility for extension. Candidates will be given the opportunity to conduct studies building on current lab research or developing their own projects ideas. Review begins April 15, 2021 and will continue until both positions are filled. The Rahnev lab, at the Georgia Institute of Technology in Atlanta, has access to exceptional research facilities. The lab space is conveniently located just steps away from a 3T Prisma MRI scanner at the Center for Advanced Brain Imaging (CABI, cabiatl.com) The lab also houses its own TMS equipment and is pioneering the use of concurrent TMS-fMRI that allows TMS to be delivered inside the MRI scanner. Working in the Rahnev lab presents opportunities for collaborations across several Atlanta-based universities including Georgia Tech, Emory and Georgia State. Georgia Tech is located at the heart of Atlanta, a vibrant, multicultural city that offers many opportunities for engaging in cultural, culinary, sports, and entertainment activities. Our lab aims to create a supportive, fun and productive environment. We are especially interested in maintaining our already diverse team and therefore seek applications from qualified individuals from all demographics and backgrounds. For more information, visit our website at http://rahnevlab.gatech.edu/getinvolved.html. To apply, email (1) your CV, (2) a brief description of what types of research questions you may want to pursue if you join us, and (3) a list of three references (names and email addresses will suffice at this point) to Dr. Rahnev (rahnev(a)psych.gatech.edu) Review begins on April 15, 2021 and will continue until both positions are filled. Best, Kai Kai Xue PNM Lab Manager Georgia Institute of Technology | Department of Psychology 424.402.7816

April 8, 2021