June 2018 - Comp-neuro - lists.cnsorg.org

Postdoc position in Geometric Methods for Deep and Reinforcement Learning at RIST

by Luigi Malagò

=========================================================== *Subject*: Postdoc position in Machine Learning (1 year, renewable up to 2.5 years) *Institution*: RIST - Romanian Institute of Science and Technology, Cluj-Napoca *Keywords*: Deep Learning, Reinforcement Learning, Stochastic Optimization, Optimization over Manifolds, Information Geometry, Riemannian Geometry *Application deadline*: 30 June 2018 (applicants are encouraged to apply earlier) *Salary*: around 2190 euro net *Official announcement*: http://rist.ro/en/details/news/postdoc-positio ns-in-deep-learning-and-machine-learning.html =========================================================== Dear colleagues, the Romanian Institute of Science and Technology (RIST) has an opening for a postdoc position, in the context of the DeepRiemann project “Riemannian Optimization Methods for Deep Learning”, funded by European structural funds through the Competitiveness Operational Program (POC 2014-2020). The appointments will be for 1 year, with possible extensions up to 2.5 years. The DeepRiemann project aims at the design and analysis of novel training algorithms for Neural Networks in Deep Learning, by applying notions of Riemannian optimization and differential geometry. The task of the training a Neural Network is studied by employing tools from Optimization over Manifolds and Information Geometry, by casting the learning process to an optimization problem defined over a statistical manifold, i.e., a set of probability distributions. The project is highly interdisciplinary, with competences spanning from Machine Learning to Optimization, Deep Learning, Statistics, and Differential Geometry. The objectives of the project are multiple and include both theoretical and applied research, together with industrial activities oriented to transfer knowledge, from the institute to a startup or spin-off of the research group. The positions will be part of the new Machine Learning and Optimization group http://luigimalago.it/group.html, which performs research at the intersection of Machine Learning, Stochastic Optimization, Deep Learning, and Optimization over Manifolds, from the unifying perspective of Information Geometry. The group is one of two newly-formed groups in Machine Learning at RIST, where about 20 new postdoctoral research associates and research software developers will be hired by 2018. The official job announcement can be seen here: http://rist.ro/en/details/news/postdoc-positions-in-deep-lea rning-and-machine-learning.html Informal inquiries can be sent to Dr. Luigi Malagò <malago(a)rist.ro>, principal investigator of the DeepRiemann project. Application deadline: 30 June 2018 (applicants are encouraged to apply earlier) best regards, Luigi Malagò

June 7, 2018

Postdoc position in computational neuroscience- University of Calgary

by Roberto C Sotero

The Computational Neurophysics Lab at the University of Calgary ( www.soterolab.com) headed by Dr. Roberto C. Sotero, is looking for a talented postdoctoral fellow, interested in working in the field of computational neuroscience, specifically modeling and identifying brain networks from EEG and fMRI data, and developing model-based control methods to steer these networks from their pathological dynamics towards healthy dynamics. As an example, see our recent paper: http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.10061… The perfect candidate has a strong mathematical, physical, or engineering background (or equivalent), programming skills, and a keen interest in biological and neural systems. A PhD in the field of computational neuroscience is a plus. Applications including a CV, the statement of research interests, and the names and contact information of two references should be sent to roberto.soterodiaz(a)ucalgary.ca. Applications will be assessed as they arrive, and the position will remain open until filled. Salary will be based on University of Calgary post-doctoral rates and commensurate with experience. Best regards, Roberto C. Sotero, PhD Assistant Professor Department of Radiology Hotchkiss Brain Institute University of Calgary, Alberta, Canada www.soterolab.com roberto.soterodiaz(a)ucalgary.ca

June 7, 2018

PhD position, University of Innsbruck (Austria)

by Antonio Rodriguez-Sanchez

Ph.D. Student Position in Robot Learning or Computer Vision at U. Innsbruck The research group in Intelligent and Interactive Systems <https://iis.uibk.ac.at/>, led by Profs. Justus Piater and Antonio Rodríguez-Sánchez, has an opening for a Ph.D. student, on a university assistant position that includes minor teaching requirements. The research will be loosely aligned with ongoing research projects <https://iis.uibk.ac.at/research/projects> in the lab: deep learning in computer vision or robotics computational models of biological vision biologically-inspired computer vision robot vision and closed-loop sensorimotor interaction open-ended and intrinsically-motivated robot learning concept discovery by learning robots goal-oriented exploratory learning prediction of action effects robot skill optimization human-robot interaction and collaboration How to Apply Interested applicants should send a letter of motivation, a curriculum vitae including URLs of English-language theses and dissertations, scanned transcripts and diplomas, and contact information of at least two references in PDF to Justus.Piater(a)uibk.ac.at <mailto:Justus.Piater@uibk.ac.at>. Applications will be considered as they are received, until all positions are filled. Starting date is October 2018 or earlier. More details on https://iis.uibk.ac.at/jobs <https://iis.uibk.ac.at/jobs> Priv. Doz. Antonio Rodríguez-Sánchez, PhD Intelligent and Interactive Systems Dept. of Computer Science - Institut für Informatik University of Innsbruck - Universität Innsbruck Austria – Österreich https://iis.uibk.ac.at/public/antonio/ <https://iis.uibk.ac.at/public/antonio/>

June 7, 2018

Combined Postdoc and science manager to be integrated into the Human Brain Project – Data-driven modeling of plasticity combined with project coordination

by Jeanette Hällgren Kotaleski

Dear Colleagues, dear all, KTH Royal Institute of Technology, Stockholm, is currently recruiting a joint postdoc / science manager to be working within the Human Brain Project. Specifically for the above position data-driven modeling of receptor induced cascades such as GPCR dependent cascades involved in neuromodulation and synaptic plasticity will be done. The first year also research coordination and management is an important challenge of the job. Position can be prolonged (up to maximally 2 or 4 years, the latter if one has received a PhD within the last 3 years). More info and how to apply at: https://www.kth.se/en/om/work-at-kth/lediga-jobb/what:job/jobID:208384/wher… All the best, Jeanette Hellgren Kotaleski Prof, Dept Computational Science and Technolgy, School of Electrical Engineering and Computer Science, KTH Royal Institute of Technology, Stockholm

June 5, 2018

Master programme in Neuroinformatics and Computational Neuroscience

by Marcus Kaiser

Dear all, Please forward the following to interested final year UG students. our one-year master degree program in Neuroinformatics and Computational Neuroscience at Newcastle University is now accepting student applications. The course focuses on handling brain connectivity datasets, analyzing electrophysiological recordings, and simulating neural activity and development. Applications range from theoretical neuroscience and machine learning to experimental and clinical research. There are more than a dozen faculty members in the areas of Neuroinformatics, Health Informatics, and Neurotechnology within Newcastle University (see overview at http://neuroinformatics.ncl.ac.uk/ ). Close interactions with experimental and clinical researchers are a key component of the course and the dissertation research project. Ongoing research areas in Newcastle include neuroimaging, psychophysics, systems neuroscience (visual, auditory, and motor system), ageing, neurorehabilitation, brain rhythms, brain-machine interfaces, neurochips, and connectomics (http://www.ncl.ac.uk/ion ). Newcastle University hosts around 100 principal investigators in the neurosciences. You can find out more about the program and how to apply at http://www.ncl.ac.uk/postgraduate/courses/degrees/computational-neuroscienc… COURSE OUTLINE The MSc in Neuroinformatics is a full-time, one-year advanced masters course designed for students who have a good degree in the biological sciences or the physical sciences (computer science, mathematics, physics, engineering). It provides the specialist skills in core Neuroinformatics courses (such as computing and biology) with a significant focus on the development of research skills. Prior experience with computers or computer programming is not required. The program is ideal for students aiming for careers in industry or academia. The course is based in the School of Computing but there are strong links with biomedicine, engineering, and the Institute of Neuroscience. WHY STUDY AT NEWCASTLE? The MSc in Neuroinformatics is a truly interdisciplinary degree and provides the dual skills necessary to establish a rewarding career in this research area. The Newcastle program has a research focus on data management, network analysis (e.g. Kaiser, Neuroimage, 2011), and simulation. Newcastle is among the pioneers of the field in the UK and hosted the £4m EPSRC-funded CARMEN project for managing and processing electrophysiology data. We are currently involved in the £10m EPSRC/Wellcome Trust-funded CANDO project for developing an implantable optogenetic device for epilepsy patients (http://www.cando.ac.uk/ ). Newcastle has strong links with the International Neuroinformatics Coordinating Facility (INCF). Currently, members of the faculty lead Neuroinformatics UK (http://www.neuroinformatics.org.uk/ ) and co-chair the Neuroinformatics Special Interest Group of the British Neuroscience Association (BNA). COURSE CONTENT Semester 1 contains modules to build the basic grounding in, and understanding of, Neuroinformatics theory and applications, mathematics and statistics, and programming. Semester 2 introduces modules that focus heavily on introducing subject-specific research skills and includes options for choosing modules. A major part of the programme is a research project that will occupy approximately six months. This project may be associated with staff in any of the Schools mentioned above, thus providing a wide range of exciting areas in which the newly learnt Neuroinformatics skills can be deployed. HOW TO APPLY Applications for this program are now being accepted. Please see http://www.ncl.ac.uk/postgraduate/courses/degrees/computational-neuroscienc… for more information. Best, Marcus -- Marcus Kaiser, Ph.D. FRSB @ConnectomeLab<https://twitter.com/ConnectomeLab> Professor of Neuroinformatics Interdisciplinary Computing and Complex Biosystems (ICOS) Research Group School of Computing Urban Sciences Building Newcastle University 1 Science Square Science Central Newcastle upon Tyne NE4 5TG UK Lab website: http://www.dynamic-connectome.org<http://www.dynamic-connectome.org/>/ Neuroinformatics@Newcastle: http://neuroinformatics.ncl.ac.uk/ Neuroinformatics UK: http://www.neuroinformatics.org.uk/ Neuroinformatics one-year master programme: http://research.ncl.ac.uk/neuroinformatics/study

June 5, 2018

Postdoc in Brain Network Analysis and Modeling at Vanderbilt University

by Mikail Rubinov

Dear Colleagues, The Rubinov lab at Vanderbilt University Biomedical Engineering (http://www.rubinovlab.net) analyzes and models brain networks across modalities, species and scales. Our research interests broadly include: 1) Integrative statistical models of big neuroscience networks. 2) Evolutionary principles of brain network organization. 3) Information transfer in neural systems. 4) Neuropsychiatric connectivity phenotypes. We are recruiting a motivated postdoctoral researcher to join our lab. The position will be based at the Department of Biomedical Engineering and will be supervised by Dr. Mika Rubinov. There will be opportunities to develop exciting research ideas at the intersection of systems neuroscience, evolutionary neuroscience, network science and data science, and to collaborate with leading investigators at Vanderbilt University and Janelia Research Campus (Howard Hughes Medical Institute). The successful applicant should be passionate about neuroscience and understanding the brain, have good programming skills, and a strong background in a quantitative discipline, including but not limited to network science, computational neuroscience, computational biology, mathematics, physics, computer science, or electrical engineering. Preference will be given to applicants with a good publication record and with experience in analysis of complex datasets. The applicant must have completed their PhD by the start of this position. The position will be initially for one year, with possibilities for yearly extensions subject to satisfactory annual reviews. The salary will be commensurate with the applicant’s experience and qualifications. Vanderbilt is an elite research university (https://www.usnews.com/best-colleges/vanderbilt-3535) located in Nashville, one of the hottest cities in the US today (http://www.visitmusiccity.com/media/rankings) Applicants are welcome to email Mika Rubinov for more details and information. Please submit the following application materials directly to mika.rubinov(a)vanderbilt.edu 1) A cover statement of the applicant’s fit for this position. 2) Curriculum Vitae. 3) A list of 2-3 key publications. 4) Contact details for 2-3 referees. Review of applications will begin immediately and will continue until the position is filled. https://www.nature.com/naturejobs/science/jobs/645613-postdoctoral-research… Best regards, Mika

June 4, 2018

Postdoctoral Position @UPenn in Vision Science & Computational Neuroscience

by Burge, Johannes

I am looking for a postdoctoral researcher to fill an NIH-funded position on the research team in the Natural Vision Lab at the University of Pennsylvania (http://burgelab.psych.upenn.edu<http://burgelab.psych.upenn.edu/>). My lab works to understand how vision works with natural stimuli. We use databases of natural images, statistical learning tools, ideal observer analysis, and behavioral experiments to gain a precise understanding of the processes that support perception. We have ongoing projects across a range of topics in vision and computational neuroscience, but we tend to focus on tasks and coding problems that are directly or indirectly related to motion and depth perception. My lab is also affiliated with the Computational Neuroscience Initiative at Penn, a community of top researchers working on an array of problems in sensation, perception, and cognition. Strong computational and programming skills are necessary, as well as experience designing and running psychophysical experiments. Familiarity with Matlab and Psychtoolbox is required. A solid background in computer graphics and knowledge of C/C++ and object oriented programming is desirable. The lab has a high refresh-rate VPixx ProPixx projector, a haploscope driven by two high-resolution VPixx ViewPixx monitors, and a large suite of custom code for statistical learning and for the analysis of psychometric data. Applicants must have finished their Ph.D. in neuroscience, vision science, engineering, computer science, or related fields and have a demonstrated record of research productivity. The position is available before the end of Summer 2018. The precise start date is flexible. Applicants should send a brief statement of interest, CV, and the names of three references to Johannes Burge (jburge(a)sas.upenn.edu<mailto:jburge@sas.upenn.edu>). Letters will be requested if your candidacy is being seriously considered. Applications will be assessed as they arrive and the position will remain open until filled. Salary will be based on NIH post-doctoral rates and commensurate with experience. ======================== Johannes Burge, PhD Assistant Professor Department of Psychology Neuroscience Graduate Group University of Pennsylvania http://burgelab.psych.upenn.edu jburge(a)sas.upenn.edu (215) 573 6528

June 4, 2018

IBRO-Simons Computational Neuroscience Imbizo 2019: call for Teaching Assistants

by ucgtada＠ucl.ac.uk

The IBRO-Simons Computational Neuroscience Imbizo (isiCNI) is a computational neurosciencesummer school held in Cape Town, South Africa. We are looking for several Post-Doc (oradvanced PhD) researchers to join our team as Teaching Assistants (TAs) for the isiCNI2019 in January 2019. *About the Imbizo:* The school hosts 30 students for an amazing 3 weeks of lectures, tutorials, projects and parties! All this takes place right on Muizenberg beach, between the mountain and the ocean. It's a spectacular location. The dates for the isiCNI2019 are*January 6th - 27th 2019.* The Imbizo is a special experience, with students being totally immersed in academic, social, touristic and cultural activities for the full 3 weeks. This has resulted in student and TA groups from previous schools becoming very close, personally and scientifically. This is fantastic, as a major goal of the isiCNI project is to help young African researchers grow their academic peer and friend group. *About being a TA:* EachTAruns one afternoon tutorial in the first week of the school, which they design themselves. Each TA will teach a different topic, which the TA's choose among themselves, to try and provide students with a broad exposure to problems and methods in comp neuro. EachTAis also assigned 5 students to supervise for project work during the second 2 weeks of the school. TAs are integral in helping run the school. In addition to academic support, they foster good social interaction and academic discussions between students and help 'shy' students meet faculty. They also act as 'social' care-takers, helping to notice and support students who may be feeling ill, not fitting in socially, or generally having difficulties. To fulfil these roles, TAs need to be at all school meals and activities. We will also need a little help processing studentapplications*during August*. *What we provide:* All this is obviously at no cost to TAs. We cover a direct as possible economy class ticket to Cape Town, as well as all board and lodging during the school. In addition, TAs will receive a cash budget for 'hosting purposes' during the school (e.g. buying some beers/ice-creams for students, train tickets, etc.) *I'm interested, how do I apply:* If you think you would like to join us for this amazing experience, please send us a brief CV (2 or 3 pages is fine) toisicn.imbizo(a)gmail.com <mailto:isicn.imbizo@gmail.com>. Please include (as a cover letter or in your email) a short motivational statement for why you would be a good fit. The_*DEADLINE is JUNE 18th 2018*_ We hope to hear from you soon! Let us know if you have any questions. Thanks and regards Dr Peter E. Latham, Dr Tim Vogels, Dr Joseph Raimondo and Alex Antrobus IBRO-Simons Computational Neuroscience Imbizo Committee 2019 #isicni2019 Twitter: @isicni

June 4, 2018

FENS Satellite Symposium: From Scanner to Bedside

by Marcus Kaiser

Dear colleagues, I would like to draw your attention to our FENS Satellite Symposium "From Scanner to Bedside - What do connectome and gene expression say about brain diseases?" chaired by Prof. Marcus Kaiser (Newcastle University) and Dr Markus Butz-Ostendorf (Biomax): https://www.biomax.com/symposiums/from-scanner-to-bedside/ In this FENS satellite symposium on Friday 6 July, research with a high potential for applications in neurology and psychiatry is presented. We want to bring together scientists with clinicians from all disciplines dealing with brain diseases and to provide a forum for discussion and exchange what steps are needed to bring novel techniques into clinical applications. Keynote Lectures are given by PROF. DR. ANDREAS MEYER-LINDENBERG (Zentralinstitut für seelische Gesundheit, Mannheim, Germany) PROF. DR. ED BULLMORE (Cambridge University, Cambridge, UK) PROF. DR. DR. ELISABETH BINDER (Max-Planck Institute for Psychiatry, Munich, Germany) For the full program see https://www.biomax.com/symposiums/from-scanner-to-bedside/ Participation is free but please register at https://ssl.biomax.de/Symposium/register.html Looking forward to welcoming you in Berlin! Best regards from the organizers, Marcus Kaiser & Markus Butz-Ostendorf -- Marcus Kaiser, Ph.D. FRSB @ConnectomeLab<https://twitter.com/ConnectomeLab> Professor of Neuroinformatics Interdisciplinary Computing and Complex Biosystems (ICOS) Research Group School of Computing Urban Sciences Building Newcastle University 1 Science Square Science Central Newcastle upon Tyne NE4 5TG UK Lab website: http://www.dynamic-connectome.org<http://www.dynamic-connectome.org/>/ Neuroinformatics@Newcastle: http://neuroinformatics.ncl.ac.uk/ Neuroinformatics UK: http://www.neuroinformatics.org.uk/ Neuroinformatics one-year master programme: http://research.ncl.ac.uk/neuroinformatics/study

June 2, 2018

Job Vacancy Announcement - Health Scientist Administrator (Program Officer) Computational Neuroscience and Electrophysiology Program

by Michele Ferrante

*Health Scientist Administrator (Program Officer)Computational Neuroscience and Electrophysiology ProgramNational Institute of Mental HealthDepartment of Health and Human Services* The National Institute of Mental Health (NIMH) Division of Neuroscience and Basic Behavioral Research announces openings for Health Scientist Administrators (Program Officer) to guide and manage a grants program supporting basic research in computational neuroscience and electrophysiology. The Program Officer will lead an extramurally-funded and innovative program employing computational and mathematical approaches to modeling dynamical neuronal processes underlying brain signaling from molecules and cells, as well as complex behaviors (e.g., affect, cognition, executive function, and social behavior). Topic areas within this program include empirical and computational studies (theory- and data-driven models), that combine mathematical and computational tools with neurophysiological, neuroanatomical, or neurochemical techniques to identify the biological mechanisms underlying single cell and circuit dynamics. The program supports studies to develop novel analytical and statistical approaches to high dimensional data sets to identify patterns and relationships among mental health relevant variables. Hypothesis-driven studies seeking to integrate diverse levels of analysis, casual manipulations, and theoretical modeling of neural dynamics are of special interest as are studies developing novel computational algorithms and methods for acquisition, analysis and interpretation of neural data in model systems. This position provides an opportunity to impact priorities, develop new research initiatives and to contribute to the advancement of a national program of computational neuroscience research spanning molecular and cellular electrophysiological analyses. Individuals are encouraged to apply who have research experience using a broad range of computational methods and electrophysiology. General responsibilities will include administering and managing an extramural portfolio of research grants, interacting with researchers and program officers for related programs at NIMH, NIH, and other funding agencies, and developing new research initiatives. This position requires working both independently and collaboratively. Strong organizational, oral, written and communication skills are also required. Salary will be commensurate with the experience of the candidate. A full package of federal Civil Service benefits is available, including: retirement, health and life insurance, long term care insurance, leave, and a Thrift Savings Plan (401K equivalent). The successful candidate is subject to a background investigation and public financial disclosure requirements. For medical and scientific specialties, qualification requirements, evaluation criteria, and application instructions, please view the vacancy announcement at https://jobs.nih.gov/globalrecruitment/. Interested candidates should send a letter of interest, including a curriculum vitae to *NIMHsearch(a)mail.nih.gov* <NIMHsearch(a)mail.nih.gov>*.* The NIH encourages the application and nomination of qualified women, minorities, and individuals with disabilities. HHS and NIH are Equal Opportunity Employers. https://www.nimh.nih.gov/about/careers/job-vacancy-announcement-health-scie… https://www.nimh.nih.gov/about/careers/dnbbs_job_announcement_hsa_computati… Please feel free to reach out (ferrantem(a)nih.gov) for guidance. Regards, Michele …………………………. Michele Ferrante, Ph.D. (ferrantem(a)nih.gov) Program Director: Computational Neuroscience & Computational Psychiatry National Institute of Mental Health 301-435-6782 <(301)%20435-6782>

June 1, 2018