January 2018 - Comp-neuro - lists.cnsorg.org

Summer School of the Centre for Neural Dynamics

by Richard Naud

Call for applicants of the Summer School of the Centre for Neural Dynamics The summer school is intended for graduate students and undergraduate students in their third and fourth year of study in the physical sciences (e.g. physics, applied mathematics, engineering, computer science) and the life sciences (e.g. neuroscience, biology, physiology, human kinetics) who wish to develop their skills in neural data analysis and in mathematical modeling of neural activity. The topics will range from cellular to systems neuroscience, with applications in medicine. Individuals outside of academia may also participate. Dates: May 20 - June 2, 2018. Location: Ottawa, Canada. Application Deadline: February 15, 2018. Faculty André Longtin (uOttawa) Richard Naud (uOttawa) Steve Prescott (Sick Kids) Jonathan Rubin (UPitt) Jean-Philippe Thivierge (uOttawa) Majid Mohajerani (ULethbridge) Greg Silasi (uOttawa) Adam Sachs (uOttawa) Jean-Claude Béïque (uOttawa) Maurice Chacron (McGill) Georg Northoff (uOttawa) Detailed information can be found on the website of the Centre of Neural Dynamics<http://www.neurodynamic.uottawa.ca/summer.html>. Kind Regards, André Longtin and Richard Naud

Jan. 13, 2018

Job opening for Neural Engineer - Multiple Levels

by Zanos, Theodoros

The Neural Decoding and Data Analytics Lab at the Center for Bioelectronic Medicine, Feinstein Institute for Medical Research is currently recruiting for a Neural Engineer (multiple levels). The lab focuses on the development of data analysis methods to gain insights into decoding and encoding mechanisms of the brain and peripheral nerves to and from stimuli, actions and other physiological functions. The lab utilizes a variety of techniques from signal processing, machine learning, optimization, neurophysiology and bioelectronic systems for closed-loop neural recording and stimulation, both in health and in disease models. The ultimate goal is to develop neuromodulation therapies that will observe the state of the organism and the organ system that is targeted, to deliver individualized treatment of diseases in real-time. The successful candidate will develop computational tools and may take part in neurophysiology experiments, organize and analyze data, collaborate with other research staff and publish and present data in a timely manner. They will also work collaboratively with other investigators to facilitate their scientific research and training. Furthermore, they will participate in various types of institute and community activities and may apply for grant funding and/or patents as appropriate. Job Responsibilities Include: Develops computational tools for neuroscience research. Performs bioelectronic medicine research. Collaborates with other research staff. Responsible for the planning, collection, organization, analysis and interpretation of research data related to one or more projects Job Type: Full-time Qualifications Associate Engineer (MS Level) - Masters in Engineering, Computer Science or Statistics required Postdoctoral Fellow - Doctorate degree in Engineering, Computer Science or Statistics (Ph.D) required Neural Engineer - Masters in Engineering, Computer Science or Statistics + 3 years of experience required, Doctorate degree preferred Authored/co-authored research papers and/or scientific abstracts, required Experience with various signal processing and machine learning methods, required Strong programming skills of Matlab, required, Python, C++, preferred Research experience in neurophysiology/neuroscience/animal surgery, preferred Knowledge of data analysis software (e.g. Matlab), preferred To apply, please send a cover letter describing your qualifications and an academic CV to tzanos at northwell.edu and include Neural Engineer in the subject heading. Thank you, Theodoros Zanos, PhD Assistant Professor Head, Neural Decoding and Data Analytics Lab Center for Bioelectronic Medicine, Room 1257 The Feinstein Institute for Medical Research Hofstra Northwell School of Medicine 350 Community Drive Manhasset, NY 11030 Tel: (516) 562-0484 Cell: (646) 943-3440 Email: tzanos(a)northwell.edu Northwell Health Visit us at Northwell.edu Theodoros Zanos, PhD Assistant Professor Head, Neural Decoding and Data Analytics Lab Center for Bioelectronic Medicine, Room 1257 The Feinstein Institute for Medical Research Hofstra Northwell School of Medicine 350 Community Drive Manhasset, NY 11030 Tel: (516) 562-0484 Cell: (646) 943-3440 Email: tzanos(a)northwell.edu<mailto:tzanos@northwell.edu> Northwell Health Visit us at Northwell.edu<http://northwell.edu/> [cid:image001.png@01D38B92.21B19A90] The information contained in this electronic e-mail transmission and any attachments are intended only for the use of the individual or entity to whom or to which it is addressed, and may contain information that is privileged, confidential and exempt from disclosure under applicable law. If the reader of this communication is not the intended recipient, or the employee or agent responsible for delivering this communication to the intended recipient, you are hereby notified that any dissemination, distribution, copying or disclosure of this communication and any attachment is strictly prohibited. If you have received this transmission in error, please notify the sender immediately by telephone and electronic mail, and delete the original communication and any attachment from any computer, server or other electronic recording or storage device or medium. Receipt by anyone other than the intended recipient is not a waiver of any attorney-client, physician-patient or other privilege.

Jan. 12, 2018

Job position in Computational Neuroscience at the Institute of Biophysics (National Research Council - Italy)

by Luca Leonardo Bologna

*The Institute of Biophysics of the Italian National Research Council seeks applicants for a position in Computational Neuroscience in the laboratory of Michele Migliore (Palermo, Italy). We are seeking extremely motivated individuals to work in a highly collaborative project.* The project involves the implementation of tools/applications to operate, improve, and maintain a user-oriented simulation platform. A Master or PhD in Physics, Informatics, Computational Neuroscience, Biomedical Engineering, Electrical Engineering, or related field is required. The position is funded by the EU Human Brain Project. Salary follows the National Research Council scale for pre or post-doctoral status. The ideal candidate will have a consolidated experience in Pyhton, C, Object Oriented programming, development of web-application, and both front- and back-end web technologies (e.g. html, javascript, css, django, flask,…). A basic knowledge of the Italian language is required for foreign candidates. Applicants should email “michele dot migliore at cnr dot it” a PDF file containing: 1) a CV, highlighting evidence of required skills. 2) a max one-page statement of prior research experience and motivation to be considered for this position. The appointment will be for one year, and it could be extended. Best regards.

Jan. 11, 2018

MEG post-doc positions in Moscow, Higher School of Economics

by Alex Ossadtchi

Postdoctoral Position in Cognitive Neuroscience: MEG lab. The international Centre for Cognition & Decision Making <https://social.hse.ru/en/psy/> (CCDM, Moscow) invites applications for postdoctoral research positions in cognitive neuroscience. The newly established Magnetoencephalographiy (MEG) group provides an access to an Elekta Neuromag Vectorview 306-channel MEG system and associated equipment. The CCDM focuses on E/MEG studies in a range of research strands including normal and pathological neurodynamics, decision making and neuroeconomics, memory, motor control, language and speech, theoretical neuroscience, BCI and other neurotechnologies, neuroimaging methods (including source modeling techniques). The postholder will have an opportunity to influence the research agenda, which will be formed in collaboration with the new head of the MEG group and other PIs at the CCDM. CCDM <https://www.hse.ru/en/cdm-centre> is a young international English-speaking research center recently established at the Higher School of Economics, a dynamic, ambitious and rapidly growing university. CCDM is located in the historical city center of Moscow and provides access to all major neuroimaging techniques: fMRI, navigated TMS, EEG, MEG, tDCS/tACS, eye-tracking, behavioural measurements etc. CCDM actively cooperates with national and international collaborators such as Ecole Normale Superieure (Paris), MPI for Human Cognitive and Brain Sciences (Leipzig), Aalto University (Finland), Center of Functionally Integrative Neuroscience (Aarhus University), Duke University School of Medicine, etc. Requirements: · The position requires a PhD degree in psychology, neuroscience, physics, applied mathematics, computer science or engineering, with experience of publishing international peer-review paper in cognitive neuroscience. · Experience in MEG/EEG, including designing and running experiments, MEG/EEG data analysis, programming in Matlab, Python and R is an advantage. · Ability to work in international teams · Knowledge of Russian is not required as teaching and research are both conducted in English. General conditions for Post-Doctoral Research positions can be found here <https://iri.hse.ru/faq_pd>. Application A CV, research statement and two letters of recommendation should be submitted online application for <https://www.hse.ru/expresspolls/poll/211481597.html>m by February 15, 2017. Note that direct email applications to the CCDM may not be reviewed – please use online application for <https://www.hse.ru/expresspolls/poll/211481597.html>m. About the Higher School of Economics (HSE) The HSE is a young, dynamic, fast-growing Russian research university. Over the past twenty years, the HSE has become one of Russia's largest universities in the fields of economics, social sciences and humanities, and has earned the reputation of a national leader in higher education. Committed to high-quality research, HSE now has a considerable number of international research laboratories, led by eminent professors from all over the world; more such laboratories were opened in 2018-2019. HSE provides excellent opportunities to teach in English at BA and MS levels. Apply now <https://www.hse.ru/expresspolls/poll/211481597.html>

Jan. 11, 2018

postdoc: mathematical modelling of neuronal networks

by Laing, Carlo

The Institute of Natural & Mathematical Sciences at Massey University (Auckland) seek to appoint a Postdoctoral Research Fellow for the research group of Professor Carlo Laing. In this appointment you will be expected to contribute to the group's research activities in the modelling of networks of neurons. You will have a strong background in applied mathematics, specifically nonlinear dynamical systems, and experience in numerical computation. Some knowledge of neuroscience, or a willingness to learn, is advantageous. This position is for 3 years, requires a PhD qualification, and is based at the Auckland campus. For full details, see http://massey-careers.massey.ac.nz/10078/postdoctoral-research-fellow -- Professor Carlo Laing. INMS, Massey University, Private Bag 102-904, NSMC, Auckland, New Zealand. ph: +64-9-414-0800 x 43512. fax: +64-9-443 9790 http://www.massey.ac.nz/~crlaing/

Jan. 10, 2018

Job Posting: Postdoctoral Research Associate in Baseball, Biomedical Signal Processing and Machine Learning

by Jason Sherwin

Postdoctoral Research Associate in Baseball, Biomedical Signal Processing and Machine Learning Thor Industries, Inc. and US Army Research Laboratory Thor Industries is pleased to announce this postdoctoral position in its Cooperative Agreement with the US Army Research Laboratory (ARL). The project started approximately 4 months ago and will run approximately for another 8 months or longer (pending extension). Thor Industries is led by its Principal, Dr. Jason Sherwin. Thor Industries is partnered with the University of Tennessee Math Department on this Cooperative Agreement with the ARL. Thor Industries is tasked with examining neural and behavioral data collected from real-world baseball hitting experts and analyzing these data for relationships to real-world data (i.e., on-field statistics collected in-game). A familiarity with rapid decision-making, go/no-go paradigms and baseball metrics is a requirement. The successful applicant is expected to relocate to Aberdeen Proving Ground, MD, USA, or nearby to work at the Aberdeen Proving Ground with ARL personnel. A housing allowance will be given in addition to stated salary. A travel budget is also available to the successful applicant. Only U.S. Citizens will be considered due to security restrictions at the worksite. The successful applicant will investigate and develop advanced signal processing and machine learning algorithms for prediction purposes. The ideal candidate will have received a PhD in Biomedical Engineering, Electronic Engineering, Computer Science or a closely related discipline, and is expected to have significant experience of biomedical signal processing and machine learning techniques. Applicants are also encouraged to have a strong publication record as first author, ideally including publications in 1st quartile journals in relevant areas. Appointment will be made as Senior Research Scientist in Thor Industries. Salary: Approximately $35,000 per annum Duration: Fixed-Term until August 2019 For further information and inquiries, please contact Dr. Jason Sherwin niceboston(a)gmail.com<mailto:lciti@essex.ac.uk> ------------------------------------------------------------------ sponsored link: yahoo recommended - http://msn.medsplacerx.com ------------------------------------------------------------------

Jan. 9, 2018

Support for Two PhD Fellows in Bilbao, Caixa Fellowship, deadline 1st February

by Paolo Bonifazi

Dear colleagues La Caixa Foundation has published the call for International PhD fellowships within the program "INPhINIT". This call is providing excellent working conditions for excellent international students. More information at https://obrasociallacaixa.org/el/investigacion-y-becas/progr ama-de-becas-de-posgrado/inphinit/programme-description We will be supporting 2 applicants, one associated to the project “Machine Learning, Neurological Disorders and Brain Networks” supervised by Jesus M Cortes and the other associated to the project "Multi-scale epileptic networks: a longitudinal structural-functional study of human epileptic networks combining deep electrode recordings and MRI" supervised by Paolo Bonifazi. Applicants must have a background in Mathematics, Physics or Engineering. The student will work in the Computational Neuroimaging Lab in Biocruces (Bibao) focused on developing and applying brain connectivity methods in combination with machine learning (such as supervised and unsupervised classification), modeling (neuron or circuit levels) and imaging processing of different imaging modalities (such as magnetic resonance imaging or electroencepaholography). The student will interact with Engineers, Physicists and Clinical Researchers. Further details and readings: To study brain functioning and disfunctioning, the Computational Neuroimaging Laboratory in Biocruces (Bilbao) is focused on brain networks at the macroscale, thus affecting to the large-scale brain organization. While diffusion images provide information about structural connectivity, functional magnetic resonance imaging shed light on resting state functional connectivity. In this project, the student will work with different datasets, some of them publicly available, others acquired in our laboratory, covering different pathologies such as autism, patients in coma, epilepsy, patients with multiorganic failure, neurodegeneration such as Alzheimer’s disease or Parkinson and psychiatric disorders. https://www.frontiersin.org/articles/10.3389/fnagi.2017.00215/full http://www.mitpressjournals.org/doi/abs/10.1162/NETN_a_00007 https://www.frontiersin.org/articles/10.3389/fpsyg.2015.01024/full https://www.nature.com/articles/srep10532 Working conditions: 3-years contract, gross salary of about 26.000 euro - 28.000 euro per year, and an extra travelling and conference budget of about 3.500 euro per year. Applicant requirements: At recruitment date, candidates must have MSc degree and an English certification of minimum B2. In addition, candidates must not have residence in Spain longer than 12 months in the 3 years prior to recruitment date. Prof. Jesus M Cortes Ikerbasque Research Professor Head of the Laboratory of Computational Neuroimaging, Biocruces, Bilbao (Spain) Coordinator of the Quantitative Biomedicine Unit, Biocruces, Bilbao (Spain) Research Professor at the University of the Basque Country (Spain) http://www.jesuscortes.info Dr. Paolo Bonifazi Ikerbasque Tenure Track Professor Computational Neuroimaging Laboratory http://www.ikerbasque.net/es/paolo-bonifazi

Jan. 9, 2018

Postdoctoral position (Bayesian Computation) at QIMRB, Brisbane Australia

by Matthew Aburn

Bayesian Computation Research Fellow (full time 3 year appointment) - Cutting edge data science in the group of Prof Michael Breakspear - Attractive salary packaging & superannuation options This research fellow will develop new systems for model selection and model-based prediction, combining large data sets from patient neuroimaging and intracranial recordings with models of brain dynamics. *Responsibilities* - You will contribute to the design of methods for Bayesian inference on large data sets, to perform model selection, parameter estimation, data assimilation and prediction using forward models of brain dynamics. - Implement these methods on GPUs or high performance computing clusters, and collaborate in applying these to clinical and neuroscience research, including an application to diagnosis and treatment of epilepsy. - Perform innovative analyses of high-dimensional neurophysiological and neuroimaging data. - Contribute to experimental design and prepare manuscripts for related studies. - Participate in intra-mural group activities, including presentation at lab meetings and collaboration with other lab members and clinicians. *About you* Essential: The successful applicant will possess the following: PhD in mathematics, physics, statistics, bioengineering, computer sciences or related field; demonstrated ability to implement mathematical methods in code; and evidence of strong oral and written communication skills. Desirable: Ideally candidates may also have a published track record in applying computational inference methods for example Sequential Monte Carlo, particle filters, MCMC, ensemble Kalman filters or variational Bayes; previous experience with GPU programming or high performance computing clusters; or expertise in time series analysis or signal processing. *About the lab* Led by Prof Michael Breakspear, the Systems Neuroscience Group (SNG) is an independent research team within QIMR Berghofer. The SNG is a multidisciplinary group who undertake innovative computational modelling and analysis of brain activity in health and disease. QIMR Berghofer is a world-leading translational medical research institute. Based in Brisbane, Australia and working in close collaboration with clinicians and other research institutes, QIMR Berghofer is home to more than 600 scientists, students and support staff. *Salary* Salary range is AUD $81,395-$84,257 per annum, plus up to 15.75% superannuation, and attractive salary packaging. This is a full time three year appointment. Closing date is 4 February 2018 Apply here: http://www.qimrberghofer.edu.au/careers/positions-vacant

Jan. 9, 2018

Postdoctoral position (Mathematical Neuroscience) at QIMRB, Brisbane Australia

by Matthew Aburn

Mathematical Neuroscience Research Fellow (full time 3 year appointment) - Innovative biomedical modelling in the group of Prof Michael Breakspear - Attractive salary packaging & superannuation options This research fellow will pursue large-scale computational modelling and simulation of brain activity, and innovative analyses of time series and neuroimaging data, with particular focus on epilepsy. *Responsibilities* - You will contribute to developing and analysing new mathematical models of large-scale brain activity, including biophysical models and networks of non-linear oscillators. - Simulate computational models on GPUs or high performance computing clusters, and collaborate in applying these to clinical and neuroscience research. - Perform innovative analyses of high-dimensional neurophysiological and neuroimaging data. - Contribute to experimental design and prepare manuscripts for related studies. - Participate in intra-mural group activities, including presentation at lab meetings and collaboration with other lab members and clinicians. *About you* Essential: The successful applicant will possess the following: PhD in mathematics, physics, bioengineering, computer sciences or related field; demonstrated ability to implement mathematical methods in code; evidence of strong oral and written communication skills. Desirable: Ideally candidates may also have a published track record in analysis of non-linear dynamical systems, particularly neural mass or neural field models or coupled non-linear oscillators; previous experience with GPU programming or high performance computing clusters; previous experience in neuroscience research; or expertise in time series analysis or signal processing. *About the lab* Led by Prof Michael Breakspear, the Systems Neuroscience Group (SNG) is an independent research team within QIMR Berghofer. The SNG is a multidisciplinary group who undertake innovative computational modelling and analysis of brain activity in health and disease. QIMR Berghofer is a world-leading translational medical research institute. Based in Brisbane, Australia and working in close collaboration with clinicians and other research institutes, QIMR Berghofer is home to more than 600 scientists, students and support staff. *Salary* Salary range is AUD $81,395-$84,257 per annum, plus up to 15.75% superannuation, and attractive salary packaging. This is a full time three year appointment. Closing date is 4 February 2018 Apply here: http://www.qimrberghofer.edu.au/careers/positions-vacant

Jan. 9, 2018

CNS*2018: Registration and Abstract Submission Open

by Sharon Crook

CNS*2018 Call for Abstracts Organization for Computational Neurosciences (OCNS) 27th Annual Meeting Seattle, USA, July 13-18 Local Organizers: Christof Koch, Adrienne Fairhall, Eric Shea-Brown The main meeting begins the evening of Friday July 13 and runs through Monday July 16. It will be preceded by a day of tutorials (Friday July 13) and followed by two days of workshops (Tuesday July 17 and Wednesday July 18). Invited Keynote Speakers: Eve Marder, Brandeis University Nancy Kopell, Boston University Daniel Wolpert, University of Cambridge Rajesh Rao, University of Washington Registration and abstract submission are open. Abstract submission deadline: March 5, 2018. Note that one of the authors must register as sponsoring author for the main meeting before abstract submission is possible. In case the abstract is not accepted for presentation, the registration fee will be refunded. Abstract Submission: http://www.cnsorg.org/cns-2018-abstract-submission Registration: https://ocns.memberclicks.net/index.php?option=com_mc&view=mc&mcid=form_243… Workshop proposals also are being accepted at: http://www.cnsorg.org/cns-2018-call-for-workshops For up-to-date conference information, please visit: http://www.cnsorg.org/cns-2018 ---------------------------------------- OCNS is the international member-based society for computational neuroscientists. Become a member to be eligible for travel awards and more. Visit our website for more information: http://www.cnsorg.org.

Jan. 8, 2018