March 2017 - Comp-neuro - lists.cnsorg.org

The Virtual Brain Node 5 in Marseille, May 15-16 2017

by Viktor Sip

*The Virtual Brain (TVB) Node 5* * * *2-day Training Workshop in Marseille, France, on May 15-16, 2017* We would like to invite interested students and researchers to the upcoming *The Virtual Brain Node 5 *workshop, Marseille, France, 15th - 16th May 2017. The workshop is dedicated to a theoretical and hands-on understanding of large-scale brain network modeling using the open source neuroinformatics platform The Virtual Brain (TVB). For the first time this workshop will be held over 2 days and will go more in depth regarding the hands-on modeling sessions along explicit use cases from resting state studies and clinical applications to epilepsy and stroke. Also for the first time we will offer in-depth training of fitting virtual brain models to human imaging data. The Virtual Brain simulation environment enables the biologically realistic modeling of network dynamics using connectome-based approaches across different brain scales. Personalized brain network models can be derived from an individual’s MRI data. Configurable brain network models generate macroscopic neuroimaging signals including functional MRI, intracranial and stereotactic EEG, surface EEG and MEG for single subjects. TVB researchers from different backgrounds can benefit from an integrative software platform including a supporting framework for data management (generation, organization, storage, integration and sharing) and a simulation core written in Python. *Workshop format:* lectures and hands-on tutorials. Participants are encouraged to bring their own data to work on. *Workshop program overview:* * *- Theoretical background of large scale brain network modeling - Architecture of The Virtual Brain (TVB) - Interacting with TVB using GUI and Python interface - Preprocessing neuroimaging data, or how to obtain a TVB dataset - Fitting the brain model parameters to the functional data - Modeling resting state network dynamics in fMRI - Modeling stroke and recovery - Modeling epilepsy and surgical interventions - Modifying TVB code and implementing new features - Bring your own data hands-on sessions: preprocessing and simulations Further information and the registration form are at: https://www.eventbrite.ca/e/tvb-node5-the-virtual-brain-workshop-registrati… *Registration will be closed on April 20th.* With any questions please contact Viktor Sip (viktor.sip(a)univ-amu.fr <mailto:viktor.sip@univ-amu.fr>). -- Viktor SIP INS - Institut de Neurosciences des Systèmes UMR INSERM 1106, Aix-Marseille Université 27 Bd Jean Moulin 13005 Marseille France viktor.sip(a)univ-amu.fr http://ins.univ-amu.fr/

March 31, 2017

Final program online and registration deadline, Sense 2 Synapse 2017 Conference, Saturday April 8th, The Rockefeller University, New York City

by Christoph Kirst

Dear all, The final program for the Sense 2 Synapse**conference is online: http://www.sense2synapse.com/program Registration for participation will remain open until April 5th. You can register here: http://www.sense2synapse.com/registrationForm <https://urldefense.proofpoint.com/v2/url?u=http-3A__www.sense2synapse.com_r…>* *Join us for a day of interesting neuroscience presentations and further discussions during breakfast, lunch, and our legendary wine reception ! The organizing team Christoph Kirst Florian Berger Jeremie Barral Gonzalo Otazu Nicolas Renier *Sense 2 Synapse 2017 Program * 9:00am Breakfast & Introduction 9:30am *Gaby Maimon*(The Rockefeller University) /Quantitatively tuned efference copies in/Drosophila 10:10am Contributed Short Talks Erin Barnhart (New York University) /Multi-layered nonlinear integration of local motion cues underpins efficient coding of global motion patterns in Drosophila /Menachem Katz (The Rockefeller University) / Repetitive behavior mediated by glutamate is controlled by astrocyte-like glia in C. elegans / 10:40am Coffee Break 11:15am *Larry Abbott*(Columbia University) /A Novelty Detector in the Fly/ 11:55am Contributed Short Talks Luca Mazzucato (Stony Brook University) /Expectation modulates network dynamics in sensory circuits/ Leenoy Meshulam (Princeton University) /Place and non-place: collective coding in large hippocampal networks/ 12:25pm Lunch Break & Poster Session 3:00pm *Nicole Rust*(University of Pennsylvania) /Single-trial familiarity memories for objects and scenes/ 3:40pm Contributed Short Talks Na Young So (Columbia University) /Representation of an intention toward a delayed action by neurons in the parietal cortex/ Izumi Fukunaga (OIST Graduate University) /Task-dependent tuning of the olfactory bulb/ 4:10pm Coffee Break 4:40pm *Sarah Woolley*(Columbia University) /Early social experience couples auditory tuning and vocal acoustics/ 5:20pm Contributed Short Talks David S. Deutsch (Princeton University) /From Courtship Song Processing to Behavior in Drosophila Females / Srivatsun Sadagopan (University of Pittsburgh) /Optimal features for auditory recognition/ 6:00pm Reception -- Christoph Kirst Fellow for Physics and Biology Center for Theoretical Studies and Kavli Physics Fellow Kavli Neural Systems Institute The Rockefeller University 1230 York Avenue, New York, NY 10065 USA +1 212 327 7561 ::ckirst@rockefeller.edu

March 30, 2017

Postdoc positions in event-based vision and neurocomputing systems at TU München, Germany

by Jörg Conradt

Dear comp neuro community, the NST group at TU München, Germany, http://www.nst.ei.tum.de/en is looking for up to two postdoctoral researchers to join the group as soon as available. Research covers event-based vision and neurocomputing systems from biological modelling to engineering applications. http://www.nst.ei.tum.de/en/research/ Upcoming projects address engineering applications of neural computation; e.g. neuronal models for sensory perception, reasoning, and action generation in robotics. Preference will be given to (a) engineering applications of event-based vision and (b) investigations in spiking computing algorithms on neuromorphic hardware, such as SpiNNaker, TrueNorth, Spikey, etc. The successful postdoc is expected to initiate novel research projects (initial funding is available) and to supervise graduate and undergraduate students in his/her area of expertise. Strong programming skills are essential! Current funding is secured until September 2018 with possible extension. The positions include a reduced teaching obligation of ~2.5h per week in the recently established ENB Elite Master Program on NeuroEngineering (http://www.msne.ei.tum.de) To inquire please send brief email to office(a)nst.ei.tum.de<mailto:office@nst.ei.tum.de>. To apply, please send a concise (max 1/2 page) statement of your research interest and how you fit in our group, accompanied by your CV and names + email addresses of 2 references to office(a)nst.ei.tum.de<mailto:office@nst.ei.tum.de>. We are very much looking forward to extending our group! Thank you for spreading the announcement! Jörg Conradt -- Jörg Conradt W1 Professor of Neuroscientific System Theory www.nst.ei.tum.de<http://www.nst.ei.tum.de/> Center of Competence on NeuroEngineering www.NeuroEng.de<http://www.neuroeng.de/> Department of Electrical and Computer Engineering Technische Universität München, Karlstr. 45, 80333 Munich, Germany Tel: +49 89 289-26902, Fax: +49 89 289-26901, E-mail: conradt(a)tum.de<mailto:conradt@tum.de>

March 30, 2017

Postdoctoral Position (neural ensemble dynamics during REM sleep) at University of Strathclyde in Glasgow, UK

by Shuzo Sakata

Applications are invited for a postdoctoral research position in the group of Dr Shuzo Sakata in Strathclyde Institute of Pharmacy and Biomedical Sciences at University of Strathclyde, Glasgow, UK. This position is funded by the Leverhulme Trust. Mission of our research team is to understand state-dependent information processing in the brain at the level of neural circuits. This project particularly concerns REM sleep. Taking multidisciplinary approaches, we are aiming to elucidate the function of sub-second brain waves and underlying neural ensemble dynamics during REM sleep in rodents. As a large data set has been already collected, this project will focus primarily on data analysis and developing a computational model. The successful applicant will have a PhD in the field of neuroscience, engineering, statistics, computer science, physics or related fields. Strong quantitative skills for neurophysiological data (e.g., LFP, neuronal ensemble, video image) and/or computational modelling would be advantageous. Applicants should send (1) a CV and (2) a summary of their specific interests in our research programs to Dr. Shuzo Sakata, email: shuzo.sakata(a)strath.ac.uk. -- Shuzo Sakata, Ph.D. Senior Lecturer in Circuit Neurophysiology Strathclyde Institute of Pharmacy and Biomedical Sciences University of Strathclyde 161 Cathedral Street, Glasgow G4 0RE, UK tel: +44-(0)141-548-2156, fax: +44-(0)141-552-2562 email: shuzo.sakata(a)strath.ac.uk The University of Strathclyde is a charitable body, registered in Scotland, number SC015263

March 30, 2017

announcement ESIsync 2017 conference

by Martin Vinck

----------------------------------------------------------------------------------------------------------------------- Dear Colleagues, registration is now open for the ESI- Systems Neuroscience Conference 2017. The conference will take place on July 24th and 25th, at the Max Planck Institute for Empirical Aesthetics in Frankfurt. This year’s theme is "Principles of structural and functional brain connectivity”. The talks will cover a wide range of techniques, including electrophysiology, calcium imaging, fMRI, and computational methods for connectivity analysis. Confirmed speakers at present are: Christopher Moore, Rafael Yuste, Charles Gilbert, Fritzjof Helmchen, Thomas Klausberger, Olaf Sporns, Maria Ercsey-Ravasz, Suliann Ben Hamed, Christopher Pack and Matthew Larkum. We welcome submissions for poster presentations. More information can be found at: http://www.esi-frankfurt.de/esisync/ Regards, On behalf of the organizers: Wolf Singer, Pascal Fries, Renata Vajda, Martin Vinck, Gustavo Rohenkohl -----------------------------------------------------------------------------------------------------------------------

March 29, 2017

Save the date: Integrated Systems Neuroscience 2017 meeting (September 7-8, Manchester, UK)

by Mark Humphries

We are excited to announce the second Integrated Systems Neuroscience meeting. 7-8th September 2017, Manchester, UK The goal of this meeting is to present the state-of-the-art in integrated systems and computational approaches to key neural circuits. Each session of the programme will comprise a pair of talks presenting complementary experimental and computational work on the same circuit theme. Breaks between each session will allow for plentiful discussion of the work just seen and how it may translate to other circuits and problems in systems neuroscience. A poster session with wine reception will be held on the first evening. Confirmed speakers: Rune Berg (Copenhagen University) Tiago Branco (Sainsbury Wellcome Centre for Neural Circuits) Neil Burgess (Institute of Cognitive Neuroscience, UCL) Megan Carey (Champalimaud Institute, Lisbon) Claudia Clopath (Imperial College, London) Kate Jeffery (UCL) Christian Machens (Champalimaud Institute, Lisbon) Jonathan Pillow (Princeton) Simon Peron (New York University) Manuel Zimmer (IMP, Austria) We will shortly announce the opening of registration and abstract submission. For more information, including the current programme, please visit the website: https://www.bmh.manchester.ac.uk/conferences-meetings/isn2017/ Organisers: Mark Humphries & Rasmus Petersen (University of Manchester) Sponsors: we gratefully acknowledge the support of the Medical Research Council _____________________________________________________________________________ Dr Mark Humphries | MRC Senior non-Clinical Research Fellow | Faculty of Biology, Medicine & Health http://www.systemsneurophysiologylab.manchester.ac.uk/ [0da17e2a-9ed5-496a-b161-9fd4491ce5c7]@markdhumphries <https://twitter.com/markdhumphries> Public blog: https://medium.com/the-spike

March 29, 2017

Tenure-Track Faculty positions in Robotics at ENSTA ParisTech (with possible integration in the joint Inria-Ensta ParisTech Flowers lab)

by Pierre-Yves Oudeyer

Tenured and Tenure-Track Faculty positions in Robotics at ENSTA ParisTech (with possible integration in the joint Inria-Ensta ParisTech Flowers lab) Position description The Computer Science and System Engineering (U2IS) at ENSTA ParisTech is opening several tenured and non-tenured faculty positions in the field of robotics. The candidates will be recruited in the Autonomous Systems and Robotics research team (ASR), inside the U2IS laboratory. ASR dedicates itself to the development of technological systems with strong autonomy and high dependability, focusing in particular on learning, perception, navigation, human-robot interaction for assistive robotics and intelligent vehicles. The candidates will lead research and innovation activities on one or several of the following themes: navigation, SLAM, localization, planning and control perception, computer vision, image processing machine learning, deep learning, developmental and cognitive robotics system architecture for autonomous vehicles. These activities should be conducted in the application areas of intelligent vehicles or assistive/service robotics, in link with the other members of the team. In particular, candidates could be integrated in the joint ENSTA ParisTech-INRIA FLOWERS team (http://flowers.inria.fr) The candidates are expected to participate in the development of partnerships, collaborations and contractual relations in his domain, particularly in partnership with industry. Inquiries about the scientific context of the position can be directed to David Filliat (david.filliat(a)ensta-paristech.fr) or Bruno Monsuez (bruno.monsuez(a)ensta-paristech.fr) Faculty duties include teaching at the graduate and undergraduate levels, research, and supervision of student research. Basic knowledge, or willingness to learn french language are required as part of the teaching will be in french. Candidates must have the ability to develop a leading research program with a focus on technology development and translation into concrete applications of robotics or Intelligent Vehicles. About ENSTA ENSTA ParisTech is one of the most renowned French institutes of engineering education and research (Grande Ecole). Located in Palaiseau, it offers graduate level scientific education, excellent research facilities and a broad international network. It is a founding member of Paris-Saclay University, a federal university composed of 19 institutions (Universities, Grandes Ecoles, Research organisms). Large companies have also settled their research center in this area so that by 2020, this scientific cluster, the largest in France, will gather up to 15% of French research. Application Requirements for applying for tenured position are: possession of a doctoral university degree, excellent skills in teaching and research, completed habilitation (post-doctoral degree) or comparable research experience, obtained as part of an academic or non-academic position. Requirements for applying for non-tenured position are: possession of a doctoral university degree, a good teaching experience, have a strong publication record, and have experience with conduction research projects. The successful candidates will be expected to conduct high quality research, teach to a diverse and talented student body, and secure competitive external funding. The complete application package required includes: a curriculum vitae including a list of publications; a brief statement explaining the candidate's contribution to their best two publications, with embedded links to the publications in pdf format; a research statement; a teaching statement including a list of lectures the candidate could teach; the names and email addresses of three references. Applications should be sent to: Bruno Monsuez (bruno.monsuez(a)ensta-paristech.fr) The positions will open on March 30th, 2017 and the selection process will continue until the position is filled. Links ENSTA ParisTech Official position description (in French) Autonomous Systems and Robotics team ================ Pierre-Yves Oudeyer Research director, Inria Head of Flowers Lab Inria and Ensta ParisTech, France https://flowers.inria.fr http://www.pyoudeyer.com

March 29, 2017

Postdoctoral Position (EEG) at Stanford in Brain Network Connectivity Research

by Wei Wu

The Laboratory of Amit Etkin, MD PhD at Stanford University is currently accepting applications for a postdoctoral fellow focused on sophisticated analyses of electroencephalography (EEG) data. The focus of this position is on understanding functional brain networks using a variety of EEG methods, relating EEG to functional magnetic resonance imaging (fMRI), and application of connectivity methods in EEG. Additionally, work will focus on analysis of concurrent transcranial magnetic stimulation (TMS) and EEG data to understand neural circuit causal mechanisms. A particular emphasis will be larger-scale application of these tools and data types to treatment outcome prediction and development of clinic-translatable biomarkers. The successful applicant will have a PhD in Engineering, Statistics, Computer Science, Neuroscience, Neurophysiology, Psychology, or related fields. Experience with EEG data analysis is required. Additionally, strong quantitative skills and a programming background are important. Duties will also include manuscript preparation, presentation of findings at conferences, and contribution to the preparation of grants. Laboratory and Stanford resources include research-dedicated 3T and 7T MRI scanners, simultaneous EEG/fMRI, multiple high density EEG setups, and concurrent transcranial magnetic stimulation (TMS)/fMRI and concurrent TMS/EEG setups. Salary commensurate with experience. More information about our ongoing studies can be found at: http://etkinlab.stanford.edu. To apply, please send a curriculum vitae, a statement describing research interests and relevant background and three letters of recommendations, as well as relevant reprints/preprints of research articles to: Amit Etkin, MD, PhD Department of Psychiatry and Behavioral Sciences Stanford Neurosciences Institute Stanford University amitetkin(a)stanford.edu

March 29, 2017

The 1st International Neural Dynamics Summer School 2017 - application deadline 15th May, 2017

by Tsaneva-Atanasova, Krasimira

The 1st International Neural Dynamics Summer School 2017 Experience experimental and computational neuroscience research 30/08/2017 – 01/09/2017 Bristol University, UK We are offering twelve fully funded positions on the Wellcome Trust sponsored summer school for training and research experience in neural dynamics(TRENDs). The training and research in neural dynamics summer school is an exciting Wellcome Trust funded course held at the University of Bristol. The aim is to introduce young scientists to experimental and computational techniques used in neuroscience research. The summer school will be a three-day course made up of a series of seminars and lab visits where successful candidates will get first hand experience of electrophysiological recordings (bothin vitro and in vivo), EEG recordings, brain imaging, optogenetics, data analysis workshops and practical classes on learning to code in Python. No prior experience is necessary, but a keen interest is essential! We welcome applications from science undergraduates from a wide range of backgrounds. For successful applicants all costs to attend the course, including travel expenses within the UK, accommodation and food will be covered. Overseas travel expenses will be considered on a case by case basis. Deadline 15th May, 2017 Please send a completed application form, along with a cover letter, a copy of your CV and one academic reference or the name of one referee to elaine.sparey(a)bristol.ac.uk<mailto:elaine.sparey@bristol.ac.uk> The application form is available as .doc (TRENDS-2017-doc (Office document, 10kB)<http://www.bristol.ac.uk/media-library/sites/neural-dynamics/documents/tren…> ) or as a LaTeX templateTRENDS-2017-tex<http://www.bristol.ac.uk/media-library/sites/neural-dynamics/documents/tren…>TRENDS-2017-tex<http://www.bristol.ac.uk/media-library/sites/neural-dynamics/documents/tren…> (TRENDS-2017-tex<http://www.bristol.ac.uk/media-library/sites/neural-dynamics/documents/tren…>), please submit either .doc or .pdf. Krasimira Tsaneva-Atanasova Professor of Mathematics for Healthcare Department of Mathematics & Living Systems Institute, T02.17 University of Exeter, Stocker Road, Exeter, EX4 4QD, UK email: k.tsaneva-atanasova(a)exeter.ac.uk<mailto:k.tsaneva-atanasova@exeter.ac.uk> tel: +44 (0) 1392 723615 web: http://emps.exeter.ac.uk/mathematics/staff/kt298

March 27, 2017

DEADLINE APPROACHING : 31st March . NeuroBridges 2017

by ahmed el hady

*The deadline for NeuroBridges 2017 summer school application (* *(http://decision-making-lab.com/NeuroBridges/neurobridges2017.html <http://decision-making-lab.com/NeuroBridges/neurobridges2017.html>) is approaching. March 31st is the deadline for application. More details about the summer school and the application procedure below. * *NeuroBridges 2017 Summer school , Cluny, France* *(** September 3 - September 14, 2017 )* *NeuroBridges 2017* (http://decision-making-lab.co m/NeuroBridges/neurobridges2017.html) will be a ten days summer school. Students will attend lectures delivered by a group of leading neuroscientists, experimentalists as well as theoreticians, which will address the fundamental questions of contemporary neuroscience. In addition to the lectures, the students will work in groups on small research projects. The school is intended for graduate students and postdocs, primarily from the Middle East and the Mediterranean region either working in their home countries or abroad. We will consider applicants with some background in applied mathematics, computer science, electrical engineering or physics, interested in theoretical brain and cognitive sciences. We will also consider those with biological or medical background given that they show proof of basic mathematical knowledge (i.e. linear algebra, calculus, in particular ordinary differential equation). Through the online application system (can be accessed through: http://decision-making-lab.com/NeuroBridges/neurobridges2017.html ) , you will be asked to provide personal details, academic background, the names of two referees , a motivation letter that should include a paragraph about your quantitative skills and a CV. The school will take place between September 3 and September 14, 2017 in Le Centre de Conférences Internationales de Cluny (CCIC) <http://www.ccic.eu/index.html>. Cluny is a small medieval town in Burgundy, France, located about 400km southeast of Paris (accessible by fast train, TGV). All costs of registration and accommodation will be covered by the organizers. A limited number of travel grants will also be available. The application deadline is March 31st 2017. *NeuroBridges* is co-organized by Ahmed El Hady <http://scholar.princeton.edu/ahmedelhady/home>(Princeton Neuroscience Institute, USA), Yonatan Loewenstein <http://elsc.huji.ac.il/loewenstein/home> (Hebrew University of Jerusalem, Israel) and David Hansel <https://neurophys.biomedicale.parisdescartes.fr/members/david-hansel>(CNRS, Paris, France). *2017 Confirmed Faculty (check the website regularly for updated faculty list):* Carl van Vreeswijk (CNRS) <https://neurophys.biomedicale.parisdescartes.fr/members/carl-van-vreeswijk/> Gianluigi Mongillo (CNRS) <https://neurophys.biomedicale.parisdescartes.fr/members/gianluigi-mongillo/> Shaul Druckmann (Janelia) <https://www.janelia.org/people/shaul-druckmann> Yoram Burak (Hebrew University) <http://elsc.huji.ac.il/burak/home> Omri Barak (Technion) <http://neuroscience.technion.ac.il/researcher/19> Najib Majaj (NYU) <https://www.researchgate.net/profile/Najib_Majaj> Farzan Nadim (NJIT) <https://biology.njit.edu/people/nadim.php> Valerie Ego-Stengel (CNRS) <https://www.unic.cnrs-gif.fr/teams/Research%20group%20of%20Daniel%20Shulz> If you have any questions, please do not hesitate to email Ahmed El Hady (email: ahady(a)princeton.edu )

March 26, 2017