June 2016 - Comp-neuro - lists.cnsorg.org

PhD position at HU Berlin available

by Benjamin Lindner

We are looking for a PhD candidate in Computational Neuroscience with a strong background in theoretical physics, specifically in stochastic processes, to work on effective descriptions of temporal and spatial correlations in recurrent networks of spiking neurons. Funding is provided for three years, starting October 2016, through the international research training group IRTG 1740 "Dynamical Phenomena in Complex Networks: Fundamentals and Applications". Part of this program is a (minimum six month) stay in the lab of our collaborator in Brazil, Prof. Roque (FFCLRP, Universidade de Sao Paulo). For details on the doctoral examination process at the Physics Department of Humboldt University Berlin, see https://fakultaeten.hu-berlin.de/en/mnf/wisskar/promotionen/index_html?set_…. Please, send your application until July 31, 2016 to Nikola Schrenk (nikola.schrenk(a)bccn-berlin.de) and to me (benjamin.lindner(a)physik.hu-berlin.de) -- -------------------------------------------------------------------------------------------------------------------- Benjamin Lindner Theory of Complex Systems and Neurophysics Bernstein Center for Computational Neuroscience Berlin Philippstr. 13, Haus 2, 10115 Berlin Room: 1.17, phone: 0049(0)302093 6336 Department of Physics Humboldt University Berlin Newtonstr. 15 12489 Berlin Room: 3.408, phone: 0049(0)302093 7934 http://people.physik.hu-berlin.de/~lindner/index.html --------------------------------------------------------------------------------------------------------------------

June 27, 2016

Postdoc position in cognitive and neural modeling (Angela Yu)

by Angela J. Yu

Applications are invited from highly motivated researchers for a postdoctoral position immediately available in the Computational & Cognitive Neuroscience Lab, led by Angela Yu, at University of California, San Diego. Initial appointment is one-two years, with flexible start date and opportunity for renewal. Anticipated research direction is rather flexible, generally involving developing a decision-theoretical framework for the inter-related problems of perceptual decision-making, active sensing, active learning, interactions between affective and cognitive processing, and social cognition. Candidates must have a strong mathematical and modeling background in Bayesian statistics, Markov decision process, and general machine learning methods. Experience with measure-theoretic probability theory, stochastic processes, stochastic control theory (stopping problems, bandit problems, sequential decision problems), and/or dynamical systems analysis is also desirable. Applicants should be committed to applying rigorous mathematical tools to modeling cognitive and neural processes. Experience or interest in carrying out human behavioral experiments (either in person or on Amazon M-Turk) and/or collaborating with other human/animal neuroscience laboratories is also desirable. Dr. Yu's lab is situated within the Cognitive Science department of UCSD, and affiliated with the Computer Science Department, Neurosciences Graduate Program, and the Institute of Neural Computation. There are ample opportunities for collaborations with related groups across the UCSD main campus, the medical school, and the Salk Institute. Interested candidates should send a research statement, along with a CV including publications, to Dr. Angela Yu (ajyu(a)ucsd.edu <mailto:ajyu@ucsd.edu>). Two or more letters of references should be sent directly to the same address. ------------------------------------- Angela J. Yu Associate Professor UCSD Cognitive Science www.cogsci.ucsd.edu/~ajyu -------------------------------------

June 27, 2016

PhD position in Deep Neural Learning for Computer Vision - Naples, Italy

by Alfredo Petrosino

A fully funded 3-year PhD position is available at CVPRLab (cvprlab.uniparthenope.it) of the department of Science and Technology at the University of Naples Parthenope, Italy, on topics related to neural and machine learning and scene understanding. The aim is to work about new models of deep neural architectures with biological plausability capable of human-like learning, including learning from scratch and spatio temporal analysis. Applications include autonomous systems, active vision, and elderly assisted living, also through mobile devices and jointly with highly specialised industries. Eligibility requirements include: - Master of Science degree with academic excellence, i.e. normally an Honours Degree; - Strong experience in machine learning and basics of computer vision, as well as good mathematical and programming skills (either C/C++ or MATLAB). The net salary is nearly 1.300,00 euros per month. For further details of how to apply, entry requirements and the application form, see Advert link: http://www.unimi.it/cataloghi/dottorati_borse_premi/Bando_DOTTORATI_XXXII_c… Forms link: http://www.unimi.it/cataloghi/dottorati_borse_premi/Allegati%20bando%20gene… The deadline for applications is 1pm, 6 July 2016. Further information are given by sending an email to petrosino(a)uniparthenope.it Alfredo Petrosino, University of Naples Parthenope ****************************************************************************** IL MERITO DEGLI STUDENTI VIENE RICONOSCIUTO Il 5 per mille all'Universita' degli Studi di Napoli "Parthenope" incrementa le borse di studio agli studenti - codice fiscale 80018240632 http://www.uniparthenope.it/index.php/it/5-per-mille Questa informativa e' inserita in automatico dal sistema al fine esclusivo della realizzazione dei fini istituzionali dell'ente.

June 25, 2016

Computational Neuroscience Postdoctoral Positions at Sandia National Laboratories

by Chance, Frances S.

(Apologies in advance for any cross-posting) Colleagues, We are seeking computational neuroscientists to join an interdisciplinary research program focused on understanding neural computation at the circuit level. Example research topics of interest include computational models of retina, visual cortex (or the neural circuitry underlying perception), and the hippocampus. Candidates should have a strong background in neuroscience, and an interest in understanding of relations between neuroscience, cognitive science, and computation. Our department is part of a highly interdisciplinary community of researchers with interests spanning systems neuroscience and brain-inspired computing, engineering, and computer science. Successful applicants will be expected to conduct high-quality research, maintain a successful publication record in peer-reviewed journals, and develop collaborations with this vibrant and growing community. This position is located at Sandia's Albuquerque, NM, USA site. Required 1. A Ph.D. in Neuroscience, Computer Science, Physics, Mathematics, or related field. 2. Experience with neuroscience research methods and data analysis. 3. Strong publication record. 4. Excellent interpersonal, communication and writing skills. 5. Demonstrated ability to contribute to multidisciplinary teams. 6. Ability to obtain and maintain a U.S. Department of Energy security clearance. Desired At least some of the following qualifications are preferred: 1. Demonstrated abilities in mathematical and computational modeling of neural or cognitive function. 2. Previous research experience in a sensory system. 3. Experience with biologically-inspired machine learning algorithms. 4. Experience developing in at least one C-derived programming language (C, C++, C#, Java, etc.), or with a neural simulator (NEURON, PyNN, NEST, etc). 5. Laboratory experience in any of: electrophysiology, neural imaging, connectomics, pharmacological manipulations combined with measurement of neural activity. Submissions: Apply online at http://www.sandia.gov/careers/index.html - select "View All Jobs", and search for 653748 in the keywords box. Please include a letter of interest and a curriculum vitae. For questions or information, please contact Frances Chance (fschanc(a)sandia.gov<mailto:fschanc@sandia.gov>) or Brad Aimone (jbaimon(a)sandia.gov) Applications will be reviewed on a rolling basis, but to ensure full consideration please submit by August 31, 2016. Sandia National Laboratories is an Equal Opportunity Employer M/F/D/V.

June 24, 2016

[jobs] Post-Doc in Developmental Robotics - Short Deadline

by Patricia Hazel Shaw [phs]

Post-Doctoral Research Associate, (Fixed Term until 31 March 2018) Institute of Mathematics, Physics and Computer Science Grade 7 - £32,600 - £37,768 Closing Date: 30th June 2016 Interview Date: 4th July 2016 Applicants are invited to join the Robotics Laboratory for a project (entitled “Developmental Algorithms for Robotics”). The project is focusing on developmental robotic learning based on an iCub humanoid robot. This is a three year EPSRC funded project running at Aberystwyth University started March 2015, with the support of an International Scientific Advisory Board consisting of leading developmental psychologists. We wish to appoint a Post-Doctoral Research Associate who will develop models based on the psychological literature, and conduct experiments on our iCub humanoid robot. The successful candidate will have appropriate modelling skills and experience, and proven abilities in this area. Other tasks include writing scientific documents and papers, documenting experiments and writing reports, supervising a PhD student and collaborating with other researchers. Regular European travel will be involved. The project ends March 2018, with the fixed-term contract running to this date. For informal enquiries contact Patricia Shaw: phs(a)aber.ac.uk<mailto:phs@aber.ac.uk> +44 (0)1970 622432. For the full job description, please visit: https://jobs.aber.ac.uk/en/vacancy/post-doctoral-research-associate-develop… -------------------------------------------------------------------- Astudio gyda ni yn Aberystwyth - Prifysgol Gyntaf Cymru https://www.aber.ac.uk/cy/undergrad/ Study at Aberystwyth – Wales’ First University https://www.aber.ac.uk/en/undergrad/

June 24, 2016

Postdoctoral Position at Yale Neuroscience

by McCormick, David

An outstanding, highly-motivated post-doctoral fellow is sought to participate in studies on the cellular/network mechanisms of optimal state for performance. Candidates experienced in either computational, imaging/optogenetic, or electrophysiological methodologies are sought. We are investigating the mechanisms by which the optimal state for detection and discrimination performance is achieved in mouse neocortex. Mice are trained to perform visual and auditory detection/recognition/discrimination tasks. Through state-of-the-art techniques, such as two-photon monitoring of activity in known neuromodulatory axons in the cortex, whole cell recording of synaptic activity, high density array recordings of cortical unit activity, and optogenetic manipulation of specific transmitter systems, we are able to determine and decipher the role of different transmitter systems and neural pathways that rapidly control neuronal responsiveness. We have recently shown that the waking state varies on a continual basis and that these fluctuations account for a large component of response and behavioral variance. We take a circuit-based approach to systems neuroscience, revealing how the nervous system achieves a goal through the synaptic interaction of cells in local and long range circuits, modulated by neurotransmitters, to generate flexible behavior. Support: Postdoctoral fellows are well supported with state-of-the-art equipment dedicated to their experiments. Salary (45-65K) is competitive and commensurate with experience and contribution. Lab website: www.mccormicklab.org<http://www.mccormicklab.org/> Please contact david.mccormick(a)yale.edu<mailto:david.mccormick@yale.edu> with inquiries and applications. Send statement of interest, CV, and the names of three people for letters of recommendation. Positions available Fall, 2016. David A. McCormick Professor, Neuroscience | Yale University School of Medicine Dept. Neuroscience 333 Cedar Street | New Haven, CT 06510 | 203.785.5981 www.mccormicklab.org<http://www.mccormicklab.org/> | www.neurobiology.org<http://www.neurobiology.org/>

June 22, 2016

Summer school on neural and sensorimotor foundations of social interaction (BCBT/socSMCs)

by Alexander Maye

---------------------------------------------------------- CALL FOR PARTICIPATION ---------------------------------------------------------- Barcelona Cognition, Brain and Technology Summer School (BCBT2016) University Pompeu Fabra, Barcelona, Spain. 5-16 September 2016 http://bcbt.upf.edu/bcbt16 Join us for the annual "Barcelona Cognition, Brain and Technology summer school - BCBT2016 " (see http://bcbt.upf.edu/bcbt16/home) to be held 5-16 September 2016 in Barcelona, Spain. The BCBT summer school is positioned at the interface between biology and future and emerging technologies with an emphasis on the principles underlying brains and their translation to avant-garde technologies. BCBT promotes a shared systems-level understanding of the functional architecture of the brain and its possible emulation in artificial systems. The summer school has been part of a series of events organized by the European coordination action Convergent Science Network of Biomimetics and Neurotechnology (http://csnetwork.eu/) This year the school will be supported by the EU project socSMCs (Socializing Sensorimotor Contingencies) - A FET Proactive Horizon 2020 funded research project. (http://socsmcs.eu/) This is the 9th year of BCBT, which has run with great success in previous years thanks to an excellent line-up of outstanding speakers (see bcbt.upf.edu for previous editions of the school). BCBT lectures are available online (see http://bcbt.upf.edu/bcbt16/media) with the BCBT Podcast interviews with many of the BCBT speakers. BCBT caters to students and researchers involved in projects that are in the ambit of “BIO-ICT convergence”, "Brain Inspired ICT", “Cognitive systems- robotics”, “Cognitive and neural systems”, “Foundations of social cognition”. BCBT will offer up to 30 student slots for the practical workshops, while as many researchers can register to attend the presentations and discussion sessions as they are interested. The atmosphere of the BCBT summer school is informal with the goal to stimulate in-depth discussion. There are 1 or 2 presentations in the morning, with the afternoons reserved for tutorials and projects for student participants and road-mapping workshops or further discussion for senior scientists. For the 2016 edition we plan a 1st week of the school addressing Neural basis of social interaction while the 2nd week will include presentations aimed at the investigation of Socializing Sensorimotor Contingencies. Friday 16 is reserved for the presentation of the student projects to which everybody is invited. Application deadline: July 27th, 2016 For more information on how to apply, please go to http://bcbt.upf.edu/bcbt16/ participate BCBT is organized by Paul Verschure (BCBT Chair), ICREA and University Pompeu Fabra Barcelona, ES Andreas K. Engel (BCBT Co-Chair) University Medical Center Hamburg-Eppendorf (UKE), DE Anna Mura (BCBT Co-Chair), University Pompeu Fabra Barcelona, ES -- _____________________________________________________________________ Universitätsklinikum Hamburg-Eppendorf; Körperschaft des öffentlichen Rechts; Gerichtsstand: Hamburg | www.uke.de Vorstandsmitglieder: Prof. Dr. Burkhard Göke (Vorsitzender), Prof. Dr. Dr. Uwe Koch-Gromus, Joachim Prölß, Rainer Schoppik _____________________________________________________________________ SAVE PAPER - THINK BEFORE PRINTING

June 21, 2016

Postdoc Position Available in the Kanan lab at the Rochester Institute of Technology

by Christopher Kanan

Topic: Machine learning and deep learning for detecting manipulated images One postdoctoral position is available in the laboratory of Christopher Kanan at the Rochester Institute of Technology, in Rochester, NY (USA). The lab specializes in applying machine learning algorithms to solve problems in computer vision and related fields. The candidate will be responsible for developing new algorithms for the detecting manipulated and tampered images. Requirements: Ph.D. in computer science or related field; A research record in computer vision and/or machine learning; Familiarity with deep learning The position is initially for one year, but is renewable upon strong performance for an additional year. The salary is significantly above the typical postdoctoral market rate. Applications should be sent by email to ( christopher.kanan(a)rit.edu) and should include a CV, the expected data of availability, and contact information for 3 references. The starting date is September 2016. I will be available to do interviews during CVPR-2016. -- Christopher Kanan, Ph.D. Assistant Professor Carlson Center for Imaging Science Rochester Institute of Technology Office 3140, Building #76 http://klab.cis.rit.edu/ http://www.chriskanan.com

June 21, 2016

PhD and PostDoc Position at Düsseldorf

by Esther Florin

Please note that the deadline is on the 27th of June. An earlier message was not delivered. Post-Doc and PhD position at the Institute for Clinical Neuroscience and Medical Psychology, Heinrich-Heine University Düsseldorf Both positions are in the context of the project “Spontaneous brain activity in healthy subjects and Parkinson's disease”, funded by the Volkswagen foundation. The project aims at providing a characterization of the neurophysiological basis of the brain’s resting state networks (RSNs) by determining how communication between and within RSNs is mediated, using electro-/magnetoencephaolographic (E/MEG) data from healthy participants. In the second part of the project the characterization of RSN electrophysiology will be used to improve our understanding of the pathophysiology of Parkinson’s disease. A particular focus will be on tracing out the electrophysiological mechanisms underlying the effectiveness of dopamine treatment and deep brain stimulation. The jobs involve research design, data collection, data analysis, methods developments/implementation, presenting at conferences, and participating in the writing up of the results. The PostDoc is also expected to assist in the supervision and training of junior lab members. Preferable candidates will have a strong background in physics, neuroscience, electrophysiology, biology, computer science or related fields. Knowledge of MEG/EEG biophysics, data acquisition and analysis, biostatistics, and signal processing or the willingness and capability to quickly acquire this knowledge are essential. Qualities we are looking for: · Good scientific programming and data processing skills · Familiarity with Matlab and LaTeX · Solid knowledge of descriptive and inductive statistics and time series analysis · Previous exposure to M/EEG source estimation, Brainstorm, and fMRI resting state analysis are considered a plus · Strong motivation to carry out neuroimaging studies utilizing MEG and to perform source and connectivity analysis · Knowledge of neuroscience concepts · Good interpersonal and communication skills, particularly in the interaction with subjects and patients (beneficial: knowledge of German) · Excellent skills in written and spoken English; · Proven track record of academic excellence What we offer: The group is part of the Institute for Clinical Neuroscience and Medical Psychology at Heinrich-Heine University, Düsseldorf, located in the capital of Germany’s biggest state. The institute hosts a state-of-the-art 306 channel MEG-system and a 128 channel EEG system as well as a 3T MRI. The Heinrich-Heine University (HHU) is part of the Neuroscience Network Düsseldorf, a collaborative effort jointly with the Research Centre Jülich and the IUF - Leibniz Research Institute for Environmental Medicine Düsseldorf. A particular focus of this network is the investigation of disease-associated pathomechanisms such as the one of Parkinson's disease. At the HHU Düsseldorf the graduate school iBrain has been established and enables graduate students to obtain further formal qualifications in neuroscience. Terms and conditions for this position: Both positions are available from 1st of July 2016 or until filled. The initial appointment is for 2-3 years (postdoc) or 3 years (PhD student). Salary for the PostDoc will be according to E13/TV-L and for the PhD up to 0.65 E13/TV-L. Health insurance is included. The contract will be affiliated with Heinrich Heine University Düsseldorf. Female candidates are encouraged to apply; they will be given preference in cases of equal aptitude, ability, and professional achievements unless there are exceptional reasons for choosing another applicant. Applications from suitably qualified severely disabled persons or disabled persons regarded as being of equal status according to Book IX of the German Social Legal Code (SGB – Soziales Gesetzbuch) are encouraged to apply. Disabled applicants will be given preferential consideration in the case of equal aptitude. More information about this vacancy? Please contact Esther Florin: esther.florin(a)med.uni-duesseldorf.de<redir.aspx?REF=n0heCJN2SIPp5bF7BPLNIgtomqUCHYIGBBx5vHNmbFYEOMc_OJnTCAFtYWlsdG86ZXN0aGVyLmZsb3JpbkBtZWQudW5pLWR1ZXNzZWxkb3JmLmRl> Are you interested? Please send your application within 3 weeks to: Universitätsklinikum Düsseldorf D 01.2.1 – Kennziffer: 149E/16, Moorenstr. 5, D-40225 Düsseldorf It should include the following documents: · short (one page) application letter · your CV, incl. a list of publications and the names and contact details of two scientists who can provide references · writing sample · one-page summary of your research For administrative reasons, we cannot return applications. In submitting your application, you give your consent to the retention of the application documents by the university hospital Düsseldorf. _______________________________________________ Dr. Esther Florin Lichtenberg Assistant Professor for Systems Neuroscience Institute for Clinical Neuroscience and Medical Psychology Heinrich-Heine University Düsseldorf Tel: +49-(0)211-81-08439 esther.florin(a)med.uni-duesseldorf.de<redir.aspx?REF=n0heCJN2SIPp5bF7BPLNIgtomqUCHYIGBBx5vHNmbFYEOMc_OJnTCAFtYWlsdG86ZXN0aGVyLmZsb3JpbkBtZWQudW5pLWR1ZXNzZWxkb3JmLmRl>

June 20, 2016

Postdoctoral Fellowship in multiscale modeling methods for neuroscience simulation

by McDougal, Robert

Multiscale Modeling Postdoctoral Fellowship available for combining cell biology (reaction-diffusion) and electrophysiology in the NEURON simulator (neuron.yale.edu<http://neuron.yale.edu>). The position involves an unusual mix of software engineering and science, depending on the candidate's background and interests. Mathematically, interesting challenges arise in coupling 1D and 3D simulations and coupling deterministic with stochastic simulation. Biologically, dendrites and spines produce complex morphologies with much possibility for spatial variation in concentration. At the network level, the molecular scale interacts in unexpected ways with cellular and network dynamics. Although the work is technical and focused on software development, paper writing is expected with opportunity for both methods papers and biological papers, typically in collaboration with experimental labs. The postdoc will receive training in a wide range of interdisciplinary skills from computer science, applied math, biophysics, cell biology, electrophysiology, etc. The work is being performed in close collaboration with experimental laboratories, giving the opportunity to immediately determine how closely a modeling technique can match the experimental reality (or how experimental artifact can be reduced so as to match a model). Candidates should have a strong background in computer programming, with demonstrated proficiency in C/C++, Python, or some other major language. Familiarity with any or all of threading, MPI, SBML, or user interface design is a strong plus. Strong interest, though not necessarily research experience, in cell biology and/or neuroscience is a must. Some experience with NEURON is desirable. We are part of the team that develops and disseminates the NEURON multiscale modeling (MSM) environment, used by thousands of researchers over decades (now in year 40). As with most simulators, NEURON has historically emphasized neuronal network connectivity and cell membrane electrical dynamics. Recent advances in genomics and proteomics require that the scales of cell biology be added to the MSM mosaic. This extension is particularly important for understanding major problems in learning and memory (the genesis of long-term potentiation in the interaction of chemo- and electro-) and in understanding and developing treatments for brain disease. The work is being done as a collaboration between SUNY Downstate and Yale University under the auspices of a 5 year continuation of an ongoing grant from the National Institute of Mental Health. The NIH and other agencies (FDA, NASA, NSF, DARPA, others) are making a strong push to enhance multiscale modeling in biomedical engineering across organ systems, but particularly with respect to brain function and brain disease -- this is a major growth area in bioscience. Based on the candidate's background and preferences, job could be in Brooklyn, New Haven or via telecommuting. The labs maintain frequent communication via instant messaging (Slack) with software sharing via git and mercurial. Applicants should contact Bill Lytton or Robert McDougal by email (billl at neurosim.downstate.edu<http://neurosim.downstate.edu> robert.mcdougal at yale.edu<http://yale.edu>; no snail mail please) with a CV and cover letter describing your experience with any relevant technologies (Python, C/C++, MPI, NEURON, etc). SUNY is an equal opportunity employer.

June 17, 2016