April 2016 - Comp-neuro - lists.cnsorg.org

fully funded PhD position in Information theoretic studies of neural population coding at IIT (Italy)

by Stefano Panzeri

We are seeking candidates for a PhD position at the Italian Institute of Technology’s Neural Coding Laboratory ( https://www.iit.it/lines/neural-computation ) directed by Stefano Panzeri and located in Rovereto (Trento), Italy. IIT collaborates with Università degli studi di Trento and finances these positions at the PhD course in Cognitive and Brain Sciences. Interested candidates are invited to informally approach *as soon as possible* Prof. Stefano Panzeri (stefano.panzeri(a)iit.it) by emailing their CV and briefly explaining their interest in this position. In order to formally apply to the PhD Position, candidates will then need to refer to the call published by Università degli Studi di Trento and available at the following link: http://web.unitn.it/en/drcimec/10140/admission-doctoral-school-cognitive-an… *Deadline for formal application is 10 may 2016* Topic description: Understanding how populations of neurons encode and transmit information is a prerequisite for understanding brain functions such as perception. Progresses in neural recordings technology enable scientists to monitor the activity of larger and larger number of neurons, but it is still unclear how to analyze these data to understand how groups of neurons work together. The successful candidate will develop and use tools for the analysis of large-scale simultaneous recordings of the spiking activity of cells in the cortex to understand how populations of neurons carry information. The successful candidate will have the opportunity to both develop new advanced methods and to analyze experimental data in collaboration with many experimental neuroscience laboratories. The applicant should have a strong background in numerate sciences, and have a strong propensity for interdisciplinary research. No extensive previous experience in neuroscience is needed. However, a keen interest in understanding the brain is essential.

April 19, 2016

[jobs] Post-doc in Developmental Robotics, closing date 28th April

by Patricia Shaw

Post-Doctoral Research Associate, (Fixed Term until 31 March 2018) Institute of Mathematics, Physics and Computer Science, Aberystwyth University, Wales, UK Grade 7 - £32,600 - £37,768 Closing Date: Midnight 28 April 2016 Applicants are invited to join the Robotics Laboratory for a project (entitled “Developmental Algorithms for Robotics”). The project is focusing on developmental robotic learning based on an iCub humanoid robot. This is a three year EPSRC funded project running at Aberystwyth University started March 2015, with the support of an International Scientific Advisory Board consisting of leading developmental psychologists. We wish to appoint a Post-Doctoral Research Associate who will develop models based on the psychological literature, and conduct experiments on our iCub humanoid robot. The successful candidate will have appropriate modelling skills and experience, and proven abilities in this area. Other tasks include writing scientific documents and papers, documenting experiments and writing reports, supervising a PhD student and collaborating with other researchers. Regular European travel will be involved. The project ends March 2018, with the fixed-term contract running to this date. For informal enquiries contact Patricia Shaw: phs(a)aber.ac.uk +44 (0)1970 622432. For the full job description, please visit: https://urldefense.proofpoint.com/v2/url?u=https-3A__jobs.aber.ac.uk_en_vac…

April 19, 2016

Two positions at Boston Univ: 1.) Neural data analysis & 2.) Modeling cortical cognitive function

by Michael Hasselmo

Two positions are available in the Hasselmo laboratory in the Center for Systems Neuroscience at Boston University focused on: 1.) Analysis of neurophysiological data, and 2.) Computational modeling of cortical cognitive function. Each position could be hired as either a pre-doctoral staff position or a post-doctoral research position. 1. ANALYSIS OF NEUROPHYSIOLOGICAL DATA. This position involves working with multiple ongoing neurophysiological research projects, including unit and field potential recording in awake behaving rodents, and whole cell patch recording in brain slice preparations. The ideal candidate will be able to balance research projects efficiently and work closely with others in the lab. Interest in neuroscience and background in engineering or mathematics is preferred. Experience with scientific data analysis and signal processing is essential. Programming proficiency is required. Languages of use include: MATLAB, Python, Unix, C++, MySQL, though experience is not required in each. Experience with machine learning, computational modeling, and biomedical recording hardware/software is desirable. Responsibilities: • Develop and maintain standardized analysis procedures and toolboxes for multiple experimental paradigms. • Develop software for interfacing with experimental equipment, as required. • Assist on experimental design and statistical analyses of data • Develop processing procedures for non-standard data • Compare and fit experimental results to biologically structured models. • Prepare written presentations of results • Maintain a uniform data flow and backup procedure across researchers. • Maintain and utilize MySQL databases. 2. COMPUTATIONAL MODELING OF CORTICAL COGNITIVE FUNCTION. This position involves development of cortical circuit models of cognitive function with a particular emphasis on the prefrontal cortex, building on previous research including work in the Hasselmo laboratory at Boston University. The ideal candidate will have previous experience with development of neural circuit models of the role of neocortical structures in symbolic processing and cognitive function, with programming proficiency in languages such as MATLAB and/or Python. Responsibilities: • Develop and maintain cognitive model of cortical function using neurons at different levels of detail. • Simulate behavioral function in a range of cognitive tasks. • Assist on design of experiments using fMRI and unit recording in non-human primates. • Compare and fit experimental results to biologically structured models. • Prepare written presentations of models and experimental data. If interested, please send resume, cover letter, and names of references (letters not yet required) to Prof. Michael Hasselmo at hasselmo(a)bu.edu. -- Prof. Michael Hasselmo Director, Center for Systems Neuroscience, Department of Psychological and Brain Sciences, Center for Memory and Brain, Graduate Program for Neuroscience, Boston University, 2 Cummington St., Boston, MA, 02215, USA e-mail: hasselmo(a)bu.edu, http://www.bu.edu/hasselmo

April 18, 2016

Call for Abstracts: Bernstein Conference 2016

by Margret Franke

Call for Abstracts: Bernstein Conference 2016 ************************************************************** Satellite Workshops September 20-21, 2016 Main Conference September 21-23, 2016 PhD Symposium September 23-24, 2016 ************************************************************** The Bernstein Conference started out as the annual meeting of the Bernstein Network Computational Neuroscience and has become the largest annual Computational Neuroscience conference in Europe with more than 500 international participants in recent years. This year the conference is organized by the Bernstein Center for Computational Neuroscience Berlin at the Humboldt-Universität zu Berlin. The main conference (Sep 21-23, 2016) will be accompanied by satellite workshops (Sep 20-21, 2016) and a PhD symposium (Sep 23-24, 2016). An important part of the main conference will be the two poster sessions. We are now inviting the submission of abstracts from all relevant areas. Authors of most accepted abstracts will get the chance for a poster presentation, a small number of abstracts will be selected for contributed talks during the main conference. Please note the earlier submission deadline for authors applying for a talk. All accepted abstracts will be published online and will be citable via Digital Object Identifiers (DOI). DETAILS FOR ABSTRACT SUBMISSION: Please note that the submission of an abstract does not replace the conference registration (www.bernstein-conference.de/registration) Poster space is limited and early submission is encouraged. For abstract submission visit: http://g-node.org/abstracts/bc16/ ABSTRACT SUBMISSION DEADLINES: Posters to be considered as contributed talks: June 15, 2016 Other posters: August 1, 2016 NEW THIS YEAR – TRAVEL GRANTS This year for the first time, the Bernstein Association offers Travel Grants for participation in the Bernstein Conference. Each of the 10 Travel Grants is endowed with 500 €. Please find further information under the link: www.nncn.de/en/bernstein-conference/2016/travel-grant CONFERENCE DETAILS: Conference registration starts on May 2, 2016. Early registration deadline: July 24, 2016 Hotel rooms are relatively pricy and limited due to a huge trade fair at the same time. We offer a small contingent of hotel rooms close to conference venue on the conference website. Please book by yourself. VENUE Satellite Workshops and Main Conference: Humboldt-Universität zu Berlin, Unter den Linden 6, 10117 Berlin, Germany VENUE PhD Symposium: Humboldt-Universität zu Berlin, Campus Nord, Bernstein Center for Computational Neuroscience Berlin, Philippstr. 13 Haus 6, 10115 Berlin, Germany VENUE Public Lecture: Humboldt-Universität zu Berlin, Audimax, Unter den Linden 6, 10117 Berlin, Germany, September 21, 2016, 8 pm For more information on the conference, please visit the website http://www.bernstein-conference.de We are looking forward to welcoming you in Berlin! Local organizer: Michael Brecht Program chair: Richard Kempter Managing director: Margret Franke Co-Organizers: Bernstein Coordination Site (BCOS): Andrea Huber Broesamle, Mareike Kardinal, Kerstin Schwarzwaelder -- Margret Franke Managing Director Bernstein Center for Computational Neuroscience Humboldt-Universität zu Berlin Unter den Linden 6 10099 Berlin phone: (030) 2093-9110 fax: (030) 2093-6771

April 18, 2016

Postdoc in Warsaw - kernel-based method of electrophysiological source imaging

by Daniel Wójcik

https://neuroinflab.wordpress.com/jobs/ POSTDOCTORAL POSITION IN COMPUTATIONAL NEUROSCIENCE: kESI – kernel-based method of electrophysiological source imaging The Neuroinformatics Laboratory (https://neuroinflab.wordpress.com/) at the Nencki Institute of Experimental Biology of the Polish Academy of Sciences (NENCKI, www.nencki.gov.pl) headed by Prof. Daniel Wójcik (http://www.neuroinf.pl/Members/danek) invites applications for a postdoctoral position (36 months) that will be available as part of a nationally funded project (NCN OPUS). The goal of the project is to develop and implement a new technique of source localization of specific events in neural activity, such as a seizure, from multimodal imaging data, including ECoG (strip and grid electrodes), depth electrophysiological recordings, and MRI data from humans. The method will be validated with ground truth model data and tested on clinical data obtained from epilepsy patients. The fellow will build on already existing tools and techniques developed in the lab, see especially Potworowski et al. 2012 and Ness et al. 2015. Requirements: - PhD, preferred in physics/biophysics, mathematics, computer science, electrical engineering, computational neuroscience or related fields - Strong interest in brain research - Preference for people with experience in one or more of: numerical solutions of PDEs, electrodynamics, computational neuroscience, brain imaging - Advanced programming experience, Python preferred - Exceptional motivation for scientific research (demonstrated in former education record, additional courses completed, list of publications and conferences attended, previous scientific experience, references of the candidate’s thesis advisor, letter-of-intent) - Proficiency in English Application The application should contain the following documents/information: - CV including the list of publications, scholarships and awards, list of computational projects in which the candidate participated (preferably with links to the project website/publication or the candidate’s GitHub account). - Copy of PhD diploma - The applicant should arrange for two letters of recommendation to be sent directly to Prof. Wojcik and should provide contact information (email, phone) for the two referees in the cover letter. Preferred starting time: by September 15th, 2016 but the position is open. Application deadline: We are accepting applications until the position is filled To apply or ask for further information send email to d.wojcik(a)nencki.gov.pl -- Prof. Daniel K. Wojcik Laboratory of Neuroinformatics, Head PhD Studies, Head Nencki Institute of Experimental Biology 3 Pasteur St, 02-093 Warsaw, Poland tel: (+48 22) 5892348 fax: (+48 22) 8225342 skype: danek8317 http://dwojcik.pl/ http://neuroinflab.wordpress.com/ http://orcid.org/0000-0003-0812-9872

April 18, 2016

postdoc positions - Gatsby Computational Neuroscience Unit

by Peter Latham

The Gatsby Computational Neuroscience Unit invites applications for one or more postdoctoral training fellowships in theoretical neuroscience and related areas. We are looking especially for someone with an interest and/or background in synaptic plasticity and learning. Candidates should have a very strong analytical background in physics, mathematics, statistics, or machine learning, with an emphasis on the use of Bayesian methods in neuroscience, a detailed knowledge and understanding of the literature, and a publication record in highly ranked conferences and journals. Candidates must also have a PhD in a relevant subject area by the agreed start date of the position. For additional information, and to apply, please visit http://www.gatsby.ucl.ac.uk/vacancies/TN%20Postdoc%202016/TN%20Postdoc%2020… If you have any questions, please contact Peter Latham, pel(a)gatsby.ucl.ac.uk

April 18, 2016

Open PhD Position at the University of Exeter, UK - Modelling visuomotor coordination in People with Parkinson’s Disease

by Tsaneva-Atanasova, Krasimira

I have an open PhD Positions in my group at the University of Exeter. I am looking for PhD students with quantitative background (mathematics, physics, computer science or engineering) who are interested in applying their skills in solving biomedical and/or healthcare problems. Carlota Palmer Studentships: 2. Modelling visuomotor coordination in People with Parkinson’s Disease For further details and how to apply see: http://www.exeter.ac.uk/studying/funding/award/?id=2159<http://www.exeter.ac.uk/studying/funding/award/?id=2122> Please feel free to contact me if you have any questions regarding these positions. Krasimira Tsaneva-Atanasova Professor of Mathematics for Healthcare College of Engineering, Mathematics and Physical Sciences University of Exeter Exeter, Devon, EX4 4QF, UK tel: +44 (0) 1392 723615 email: k.tsaneva-atanasova(a)exeter.ac.uk<mailto:k.tsaneva-atanasova@exeter.ac.uk> web: http://emps.exeter.ac.uk/mathematics/staff/kt298 ALTEREGO - Enhancing Social Interaction with an AlterEgo artificial agent http://www.euromov.eu/alterego/homepage

April 18, 2016

Postdoctoral and Developer positions / Large-scale network simulator development

by Hans Ekkehard Plesser

Dear Colleagues! The computational neuroscience group at the Norwegian University of Life Sciences is currently recruiting one postdoctoral-level researcher and one scientific software developer as part of our large-scale neuronal network simulator development efforts in the Human Brain Project (HBP). Our group is responsible for four tasks in the next phase of the HBP: - Massively parallel methods for network construction from rules and data - Whole brain level in silico instrumentation, services and apps - Models of brain signals - Simulator NEST as a Service Your work will focus on the first two tasks, researching concepts required to compactly specify brain-scale neuronal networks so that they are easy for the neuroscientist to review, and at the same time can be instantiated efficiently in a massively parallel fashion. You will further work on concepts that will allow domain specialists to configure complete in silico experiments on point-neuron-based whole-brain models by connecting stimulation and recording devices to specific neuron populations. We will collaborate closely with colleagues within the HBP, especially at the Institute for Neuroscience and Medicine 6, Research Center Jülich (FZJ), at the Swiss Federal Institute of Technology in Lausanne (EPFL), and at University of Oslo. Our group is a core member of the NEST Initiative. We have access to some of the world's largest supercomputers and aim to develop simulation technology that will scale to the exascale. Preferred starting date for the positions is 1 August 2016 for a period of 20 months (until 31 March 2018). For details on the positions, please see the full advertisements at https://www.jobbnorge.no/ledige-stillinger/stilling/124473/researcher-in-ne… https://www.jobbnorge.no/ledige-stillinger/stilling/124558/head-engineer-se… where you also can submit your application. For general information about working in Norway, please see https://www.nav.no/workinnorway/ Please feel free to contact me if you are interested in the positions! Hans Ekkehard Plesser -- Dr. Hans Ekkehard Plesser, Associate Professor Section Head Dept. of Mathematical Sciences and Technology Norwegian University of Life Sciences PO Box 5003, 1432 Aas, Norway Phone +47 6723 1560 Email hans.ekkehard.plesser(a)nmbu.no Home http://arken.umb.no/~plesser

April 18, 2016

[IEEE ICCI*CC'16:] Final call for Submission: Computational Intelligence/Cognitive Informatics/Cognitive Computing @Stanford

by Yingxu Wang

Dear Colleagues, The deadline for paper submission to IEEE ICCI'CC’16 (15th IEEE International Conference on Cognitive Informatics & Cognitive Computing) is April 30, 2016 (http://www.ucalgary.ca/icci_cc/iccicc-16) The Proceedings of ICCI*CC'16 will be published by IEEE CS Press. Papers accepted in ICCI*CC’16 will be indexed by EI. Extended versions of selected papers will be published in several EI or SCI indexed journals. Full papers are expected to be around 5-8 pages in IEEE double column format. Short papers (3-4 pages) that report industrial experience, case studies, work in progress, or graduate students’ research are also welcome. Paper submission site is at: https://easychair.org/conferences/?conf=iccicc2016. The conference will be featured by four keynote speeches such as those of: * Prof. Lotfi A. Zadeh with UC Berkeley * Prof. Bernard Widrow with Stanford University The keynotes highlight cutting-edge theories and novel technologies for cognitive systems and computational intelligence inspired by the brain. We look forward to meeting you at Stanford University during Aug. 22-23, 2016. Sincerely, IEEE ICCI*CC'16 Co-Chairs GENERAL CO-CHAIRS: Bernard Widrow (Stanford) and Yingxu Wang (UofC, Canada) PROGRAM CO-CHAIRS: Newton Howard (MIT) and Kostas Plataniotis (Univ. of Toronto, Canada)_______________________________________________ This message was sent to all subscribers of ieeeicci13-L To unsubscribe, see instructions at: http://www.ucalgary.ca/it/email/mailman E-mail: ieeeicci13-L(a)mailman.ucalgary.ca Homepage: http://mailman.ucalgary.ca/mailman/listinfo/ieeeicci13-l

April 18, 2016

PhD position: neuronal self-organization in the retina

by Roman Bauer

Dear all, applications are invited for a fully-funded three-year PhD student position at the Institute of Neuroscience at Newcastle University, Newcastle upon Tyne (UK). The successful candidate will work under the supervision of Dr Roman Bauer and Dr Evelyne Sernagor, and do computational modeling as well as wet-lab work on neuronal development and self-organization in the retina. There is also the possibility for the student to be involved in a collaborative project with CERN openlab and Intel as a project partner. Applicants should be highly motivated and should have a strong background in physics, computer science, neuroscience or a related disciplince. Good computational skills and experience in a major programing language such as C++ or Java are required. The Institute of Neuroscience (IoN) is a well-established research institute integrating over 75 principal investigators, and was ranked in UK top 10 for overall quality of research. The university's Faculty of Medical Sciences, of which IoN is part of, is ranked in the top 50 worldwide for biomedical and health sciences in the Leiden Ranking. UK/EU and International students are eligible to apply, but international students will be required to make up the difference between the UK/EU fees and international fees. The deadline is May 13th, 2016. More details on this job posting can be found here: http://www.ncl.ac.uk/postgraduate/funding/sources/allstudents/12mrea.html Best regards, Roman Bauer

April 16, 2016