February 2015 - Comp-neuro - lists.cnsorg.org

Radboud Summer School Neural Metrics 2.0 : Connectomics & Large-Scale Methods

by Zeldenrust, Fleur

Neural Metrics 2.0 : Connectomics & Large-Scale Methods The Donders Institute for Brain, Cognition and Behaviour/Radboud University is organizing a summer school on neural metrics with the aim to get participants acquainted with the quantitative analysis of neural organisation and function. In Neural Metrics 2.0 we will build on the success from the previous year, focussing on methods for understanding brain networks such as connectomics as well as large scale and Bayesian methods, with world class speakers, hands-on tutorials, student projects and an interactive debate. The topics covered range from cellular connectomics to human functional connectomics. The course is designed for PhD students and starting postdoctoral researchers working at the interface between cognitive neuroscience and the application of advanced methods. Please consult the Radboud Summer school website (http://www.ru.nl/radboudsummerschool/) for details on the program, social events and registration. Further details for the Neural Metrics Summer School can be found below and on the website (http://www.ru.nl/radboudsummerschool/courses/brain-behaviour/@972443/neural…) Dates : Monday 10 August - Friday 14 August 2015 (1 week) Application Deadline : 15 June 2015 Course leaders : Bernhard Englitz, Marcel van Gerven, Fleur Zeldenrust, Tansu Celikel Donders Institute for Brain, Cognition and Behaviour & Radboud University Participant profile : This course was developed for PhD students and early postdoctoral researchers working at the interface between cellular and cognitive neuroscience requiring advanced methods of analysis. This includes research in the field of Neuroscience with an MSc in Biology, Computer Science, Psychology, Physics, Al, Mathematics, Engineering or a similar major. Admission requirements : As part of the admission procedure, we ask you to send us your CV and a brief motivation letter in which you explain your interest in our course. Course fee : 600 Euros The course fee includes the registration fee, course materials, access to library and IT facilities, coffee/tea, lunch, and a number of social activities. Accommodation is available for the course participants (additional charges apply). For details please see http://www.ru.nl/radboudsummerschool/practical-matters/housing/ Discounts : • 15% discount for students and PhD candidates from Radboud University and partner universities, • 10% Early bird discount deadline: 1 April 2015

Feb. 19, 2015

postdoc position ad

by Evelina Fedorenko

Please post. Thanks, Ev POSITION OPENING: We are looking for a postdoctoral researcher for a 1-year position (possibly extendable by another year), to work in an interdisciplinary project investigating the representation of semantic information in the brain and how it is used during sentence comprehension. The project is a collaborative effort across the labs of Ev Fedorenko (MGH/MIT) and Nancy Kanwisher (MIT), within a team in the IARPA Knowledge Representation in Neural Systems program, led by Francisco Pereira (Siemens). The ultimate goal of the team is to build a computational model of the process of language comprehension at the sentence and/or text level, and validate it with behavioral and brain imaging data. Target start date is as soon as possible. RESPONSIBILITIES: Leading one or more components of the project, including designing experiments, collecting and analyzing data (plus overseeing data collection / analyses carried out by graduate students / lab tech working on this project), presenting the results at conferences, and writing up the results for publication. The interdisciplinary nature of the project means that we will be carrying out experiments to inform the building of models of semantic representation of words and sentences from text corpora and curated resources. These will, in turn, be used to help design more informative experiments or carry out other analyses. This presents a unique opportunity for a postdoc to acquire new skills; for example, if the postdoc has a cognitive neuroscience background s/he will be expected to interact closely with the model developers in the team and learn about and leverage the techniques that they use. REQUIREMENTS: We are looking for individuals with a Ph.D. in Neuroscience, Computer Science, Psychology, Cognitive Science, or related fields. Strong quantitative skills are a must. Other desirable knowledge / skills include: i) machine learning, ii) natural language processing, and iii) collection, preprocessing and analysis of brain imaging data (using SPM, FSL or AFNI). SEND APPLICATIONS TO: Ev Fedorenko (evelina9(a)mit.edu) Applications will be reviewed until the position is filled.

Feb. 18, 2015

Neural Coding, Computation and Dynamics (NCCD)

by Peter Latham

Neural Coding, Computation and Dynamics (NCCD) August 30 - September 2, 2015 Bilbao, Spain http://www.gatsby.ucl.ac.uk/nccd/nccd15/ The goal of this workshop is to bring together experimentalists and theoreticians who seek to understand how circuit dynamics underlies representation and function in the nervous system, and to foster real discussion. This year the workshop will focus on the interplay between excitation (E) and inhibition (I) in cortical circuits. The balance between E and I, an idea proposed twenty years ago to account for the stochastic nature of cortical activity, has been seminal in the understanding of basic principles of neural network dynamics. We are seeking talks that, building on this paradigm, present recent findings on topics such as neuronal variability and stochastic dynamics, the role of the different subtypes of interneurons, plasticity and structure in EI networks, brain state and network dynamics, etc. The workshop will be limited to about 70 people, the hope being to foster real interaction and discussion. Important dates: April 30: Abstracts due (there will be posters and contributed talks) May 31: Early registration due Confirmed invited speakers Dean Buonomano, University of California at Los Angeles Jess Cardin, Yale School of Medicine Brent Doiron, University of Pittsburgh Mike Hausser, UCL Carl Petersen, Ecole Polytechnique Federale de Lausanne Karel Svoboda, Janelia Farm Tim Vogels, University of Oxford Fred Wolf, University of Gottingen Best, Peter Latham Jaime de la Rocha Maneesh Sahani Co-organizers

Feb. 18, 2015

Application Deadline Thursday, February 26, 2015, NIMH Theoretical and Computational Neuroscience Research Program Chief

by Dennis Glanzman

Please see the following job announcement published on the USA Jobs website: https://www.usajobs.gov/GetJob/ViewDetails/394555400 Note that this is a blanket announcement, listing about 75 different positions, Theoretical and Computational Neuroscience is one of them. -- Dennis Glanzman

Feb. 18, 2015

PhD and Postdoc positions at the Kavli Institute in Trondheim

by Yasser Roudi

Postdoctoral and PhD positions are available at the Kavli Institute/Centre for Neural Computation, NTNU, Trondheim, Norway. We ware interested in developing and studying statistical models of high-dimensional data, network inference and reconstruction techniques. We study both the statistical and computational aspects of the learning problem as well as the applications to biological networks for which the successful candidate will have access to a wealth of experimental data collected at the Kavli Institute. The group enjoys close ties with NORDITA- The Nordic Institute for Theoretical Physics, ICTP and the Department of Statistics at the City University of New York (group of Kamiar Rahnama Rad). Travel funds are available for collaborations and visits. Our work is highly quantitative and interdisciplinary; applicants should have a strong background in Statistics/Machine Learning, Physics, Electrical Engineering, Computational Neuroscience or similar fields. Interested applicants should send a CV, a short description of past experiences/achievements and future research interests, and arrange for two letters of recommendation to be emailed directly to <yasser.roudi at ntnu dot no>. Questions about the position should also be sent to the same email address.

Feb. 17, 2015

joint postdoctoral position at the Kavli Institute & Nordita

by Yasser Roudi

A postdoctoral position jointly funded by NORDITA- The Nordic Institute for Theoretical Physics in Stockholm and the Kavli Institue for Systems Neuroscience in Trondheim is available for studying neural mechanisms of spatial navigation and space memory, and in particular the mechanisms of grid cell and place cell formation. Our work is highly quantitative and interdisciplinary; applicants should have a strong background in statistical/condensed matter physics, computational neuroscience or related fields. Interested applicants should send a CV, a short description of past experiences/achievements and future research interests, and arrange for two letters of recommendation to be emailed directly to Prof. Yasser Roudi < yasser.roudi at ntnu dot no > or Prof. Alexander Balatsky < balatsky at kth dot se >. Please also contact the same email addresses if you have any questions about the position.

Feb. 17, 2015

A Long Journey into Reproducible Computational Neuroscience

by Nicolas P. Rougier

Dear all, We've just published a short commentary on what we think is a recurrent problem in computational science concerning the reproducibility and accessibility of models in the literature. We think the case we report (in full cooperation with original authors) is not an isolated case but we would be interested in knowing how serious the problem is from your point of view. Nicolas Rougier --- Computational neuroscience is a powerful ally in our quest to understand the brain. Even the most simple model can shed light on the role of this or that structure and propose new hypothesis concerning the overall brain organization. However, any model in Science is doomed to be proved wrong or incomplete and replaced by a more accurate one. In the meantime, for such replacement to happen, we have first to make sure that models are actually reproducible such that they can be tested, evaluated, criticized and ultimately modified, replaced or even rejected. This is where the shoe pinches. If we cannot reproduce a model in the first place, we're doomed to re-invent the wheel again and again, preventing us from building an incremental computational knowledge of the brain. Full text at: http://journal.frontiersin.org/article/10.3389/fncom.2015.00028/full

Feb. 17, 2015

Final call for registration (Feb 27th): Integrated Systems Neuroscience Workshop, March 23-24th, Manchester, UK

by Mark Humphries

[with apologies for cross-posting] A final reminder for registration for the 2-day workshop on "Integrated Systems Neuroscience", at the University of Manchester, March 23-24th 2015. (Organisers: Mark Humphries & Rasmus Petersen) Registration deadline is Friday, February 27th. Register here: http://www.isn2015.ls.manchester.ac.uk/registration/ We have a maximum capacity of 200, so please do register in good time. The programme begins at 12:45 on March 23rd, and ends at 16:45 on March 24th, allowing ample time for travel to and from Manchester, respectively. Numerous inexpensive hotels are located within walking distance of the venue - some suggestions are here: http://www.isn2015.ls.manchester.ac.uk/location/ The goal of this workshop is to showcase the state-of-the-art in integrated systems and computational approaches to key neural circuits. Each session of the programme will comprise a pair of talks presenting complementary experimental and computational work on the same circuit theme. A poster session with wine reception will be held on the first evening. Forty-one posters have been accepted, covering a rich mixture of experimental data and computational approaches; the draft abstract booklet is here: http://www.isn2015.ls.manchester.ac.uk/programme/ Speakers and their themes include: Peter Dayan (Gatsby Computational Neuroscience Unit) & Alex Thiele (University of Newcastle) - Attentional circuits Daniel O'Connor (John Hopkins University) & Srdjan Ostojic (Ecole Normale Superieure, Paris) - Functional cortical networks Peter Magill (MRC Anatomical Neuropharmacology Unit) & Rafal Bogacz (Oxford) - Basal ganglia Michael Orger (Champalimaud Institute, Lisbon) & Gasper Tkacik (IST Austria) - Large-scale dynamics Matteo Carandini (UCL) & Ken Harris (UCL) - Cortical circuits The MRC's Programme Manager for the Neuroscience and Mental Health Board (Emily Gale) will be attending both days, and will be discussing the MRC's role in this area at the end of the second day. For more information, please visit the website: http://www.isn2015.ls.manchester.ac.uk/ Sponsors: we gratefully acknowledge the support of the Medical Research Council and Company of Biologists. Dr Mark Humphries MRC Senior non-Clinical Research Fellow AV Hill Building Faculty of Life Sciences University of Manchester http://www.systemsneurophysiologylab.ls.manchester.ac.uk/

Feb. 17, 2015

PhD studentships in infancy research (including computational modelling) at Lancaster University, UK

by Gert Westermann

5 PhD studentships in interdisciplinary infancy research for entry in October 2015 (Note: This programme takes a cognitive science approach to infant development, and computational modelling is explicitly part of the research methods.) Deadline for applications: 10 April, 2015 The Leverhulme Doctoral Scholarship Programme in Interdisciplinary Research on Infant Development is one of 14 Doctoral Programmes funded by the Leverhulme Trust over the next 5 years. The programme is based in the Psychology Department of Lancaster University (UK) which houses one of the largest infancy research groups in Europe, with researchers addressing infants’ cognitive, social and language development employing a large range of methods (eye tracking, EEG, computational modelling, NIRS). Links with other departments (Linguistics, Computer Science, Mathematics and Statistics) are anticipated. Applications are now open for five fully funded PhD studentships for entry in October 2015. Four of the scholarships will cover UK/EU fees, and the fifth will additionally cover the higher overseas (international) fees. All scholarships provide a living stipend (currently £13,863) and a training allowance for three years. Studentships will have a strong interdisciplinary focus with the expectation to employ multiple methodologies. Awards will be made on the basis of academic excellence and potential for future achievement as demonstrated by your application and supporting references. In addition, you should consider how the research project you propose is aligned with the research interests of current academic staff involved in the Programme (see www.lancaster.ac.uk/leverhulme-dsp <http://www.lancaster.ac.uk/leverhulme-dsp>). You are strongly encouraged to informally contact individual staff members to discuss your specific interests and to develop a research proposal. PhD students will become part of the vibrant environment of the infancy research group and beyond with excellent research facilities and a first class supervision record. You will be encouraged to participate fully, targeting and presenting your work at international conferences, and you will have excellent opportunities to travel to our national and international partner laboratories, receive training in a range of psychological and neurophysiological techniques, participate in research and public engagement meetings, and meet with leading international scientists during an annual conference organized at Lancaster. Lancaster University is in the top 10 under-50-year-old universities internationally (http://www.timeshighereducation.co.uk/world-university-rankings/2014/one-hu… <http://www.timeshighereducation.co.uk/world-university-rankings/2014/one-hu…>), and consistently ranks in the top 10 in the UK. The Psychology Department has a very strong and supportive research atmosphere with a large and active group of graduate students. Students receive their own research support budgets, which can be used to attend national and international conferences. We expect applicants to have excellent undergraduate and Masters degrees in Psychology or a related discipline. You should apply online here: http://www.lancaster.ac.uk/study/postgraduate/ <http://www.lancaster.ac.uk/study/postgraduate/> for a PhD in Psychology by the deadline of 10 April 2015. In the application, please state that you are applying for the Leverhulme Doctoral Scholarship Programme. We ask for a research proposal of up to 1000 words – note that this is different from standard applications because of the selection process involved. The application should identify an appropriate supervisor(s) and you must ensure that references have been provided by the deadline (otherwise the application may not be considered). After the deadline, applications will be reviewed and shortlisted candidates will be invited for interview, before award decisions are made. For further information concerning the studentships, please contact Prof. Gert Westermann (g.westermann(a)lancaster.ac.uk <mailto:g.westermann@lancaster.ac.uk>), and about postgraduate study more generally, please contact the Department of Psychology postgraduate office (postgraduate.psychology(a)lancaster.ac.uk <mailto:postgraduate.psychology@lancaster.ac.uk>). See the Lancaster Leverhulme Scholarship Programme website http://www.lancs.ac.uk/leverhulme-dsp <http://www.lancs.ac.uk/leverhulme-dsp> for more information. Further information about PhD study at Lancaster can be found here www.psych.lancs.ac.uk/postgraduate/phd/ <http://www.psych.lancs.ac.uk/postgraduate/phd/>. -------------------------------------------------------------------------- Prof. Gert Westermann Department of Psychology Lancaster University Lancaster LA1 4YF Phone: +44 (0)1524 592 942 Fax: +44 (0)1524 593 744 g.westermann(a)lancaster.ac.uk <mailto:g.westermann@lancaster.ac.uk> http://www.psych.lancs.ac.uk/people/gert-westermann <http://www.psych.lancs.ac.uk/people/gert-westermann> New book: Harris & Westermann: A Student’s Guide to Developmental Psychology. Psychology Press. <http://www.routledge.com/books/details/9781848720169/>

Feb. 17, 2015

ICDL-EpiRob 2015 CFP

by Benjamin Rosman

======================================================== Call for Papers, Tutorials and Thematic Workshops New Conference Feature: BABYBOT CHALLENGE IEEE ICDL-EPIROB 2015 The Fifth Joint IEEE International Conference on Development and Learning and on Epigenetic Robotics Brown University, Providence, Rhode Island, USA August 13-16, 2015 http://www.icdl-epirob.org/ == Conference description The past decade has seen the emergence of a new scientific field that studies how intelligent biological and artificial systems develop sensorimotor, cognitive, emotional and social abilities, over extended periods of time, through dynamic interactions with their physical and social environments. This field lies at the intersection of a number of scientific and engineering disciplines including Neuroscience, Developmental Psychology, Developmental Linguistics, Cognitive Science, Computational Neuroscience, Artificial Intelligence, Machine Learning, and Robotics. Various terms have been associated with this new field such as Autonomous Mental Development, Epigenetic Robotics, Developmental Robotics, etc., and several scientific meetings have been established. The two most prominent conference series of this field, the International Conference on Development and Learning (ICDL) and the International Conference on Epigenetic Robotics (EpiRob), are now joining forces for the fifth time and invite submissions for a joint conference in 2015, to explore and extend the interdisciplinary boundaries of this field. == BABYBOT CHALLENGE -- CASH PRIZES FOR THE TOP SUBMISSIONS We are excited to announce a new ICDL-EpiRob conference feature: the BABYBOT CHALLENGE. The goal of the challenge is to use the tools of developmental robotics to replicate and extend the key findings from one of three selected human-infant studies. Please visit www.icdl-epirob.org for the full announcement, including the three target studies, details on the submission process, and a description of how the winning submissions will be judged and selected. == Keynote speakers (confirmed) Prof. Dare Baldwin, Dept. of Psychology, University of Oregon, USA Prof. Kerstin Dautenhahn, School of Computer Science, University of Hertfordshire, UK Prof. Asif Ghazanfar, Department of Psychology, Princeton University, USA == Call for Submissions We invite submissions for this exciting window into the future of developmental sciences. Submissions which establish novel links between brain, behavior and computation are particularly encouraged. == Topics of interest include (but are not limited to): * the development of perceptual, motor, cognitive, emotional, social, and communication skills in biological systems and robots; * embodiment; * general principles of development and learning; * interaction of nature and nurture; * sensitive/critical periods; * developmental stages; * grounding of knowledge and development of representations; * architectures for cognitive development and open-ended learning; * neural plasticity; * statistical learning; * reward and value systems; * intrinsic motivations, exploration and play; * interaction of development and evolution; * use of robots in applied settings such as autism therapy; * epistemological foundations and philosophical issues. Any of the topics above can be simultaneously studied from the neuroscience, psychology or modeling/robotic point of view. == Submissions will be accepted in several formats: 1. Full six-page paper submissions: Accepted papers will be included in the conference proceedings and will be selected for either an oral presentation or a featured poster presentation. Featured posters will have a 1 minute "teaser" presentation as part of the main conference session and will be showcased in the poster sessions. Maximum two-extra pages can be acceptable for a publication fee of $100 per page. 2. Two-page poster abstract submissions: To encourage discussion of late-breaking results or for work that is not sufficiently mature for a full paper, we will accept 2-page abstracts. These submissions will NOT be included in the conference proceedings. Accepted abstracts will be presented during poster sessions. 3. Tutorials and workshops: We invite experts in different areas to organize either a tutorial or a workshop to be held on the first day of the conference. Tutorials are meant to provide insights into specific topics as well as overviews that will inform the interdisciplinary audience about the state-of-the-art in child development, neuroscience, robotics, or any of the other disciplines represented at the conference. A workshop is an opportunity to present a topic cumulatively. Workshops can be half- or full-day in duration including oral presentations as well as posters. Submission format: two pages including title, list of speakers, concept and target audience. 4. Babybot challenge (Deadline June 15, 2015): Special submissions are invited for the Babybot challenge, which is for the first time introduced to this conference. For detailed information please visit www.icdl-epirob.org and navigate to “Babybot Challenge.” All submissions will be peer reviewed. Submission website through paperplaza at: http://ras.papercept.net == Important dates March 9, 2015, paper submission deadline May 15, 2015, author notification July 1, 2015, final version (camera ready) due August 13th-16th, 2015, conference == Program committee General Chairs: Matthew Schlesinger (Southern Illinois Univ.) Dima Amso (Brown University) Bridge Chairs: Jeffrey Krichmar (UC Irvine) Bertram Malle (Brown University) Program Chairs: Anne Warlaumont (UC Merced) Clemént Moulin-Frier (INRIA) Publications Chairs: Lisa Meeden (Swarthmore College) Publicity Chairs: Lola Cañamero (Univ. of Hertfordshire) Matthias Rolf (Osaka University) Benjamin Rosman (CSIR) Local chairs: David Sobel (Brown University) Thomas Serre (Brown University) Finance chairs: Clayton Morrison (University of Arizona) -- This message is subject to the CSIR's copyright terms and conditions, e-mail legal notice, and implemented Open Document Format (ODF) standard. The full disclaimer details can be found at http://www.csir.co.za/disclaimer.html. This message has been scanned for viruses and dangerous content by MailScanner, and is believed to be clean. Please consider the environment before printing this email.

Feb. 17, 2015