April 2014 - Comp-neuro - lists.cnsorg.org

BCBT2014 summer school

by BCBT, Bústia Compartida

*Barcelona Cognition, Brain and Technology Summer School (BCBT2014)* University Pompeu Fabra, Barcelona, Spain. September 1-12, 2014 http://bcbt.upf.edu/bcbt14/ Join us for the annual *"Barcelona Cognition, Brain and Technology summer school - BCBT2014 *" (see* http://bcbt.upf.edu/bcbt14 <http://bcbt.upf.edu/bcbt14>*) to be held from September 1-12, 2014 in Barcelona Spain. The BCBT summer school is part of a series of events organized by the Convergent Science Network of Biomimetics and Neurotechnology (*http://csnetwork.eu/ <http://csnetwork.eu/>*) and is positioned at the interface between biology and future and emerging technologies with an emphasis on the principles underlying brains and their translation to avant-garde technologies. BCBT promotes a shared systems-level understanding of the functional architecture of the brain and its possible emulation in artificial systems. This is the 7th year of BCBT, which has ran with great success in previous years thanks to an excellent line-up of outstanding speakers (see bcbt.upf.edu for previous editions of the school). BCBT lectures are available online (see *http://csnetwork.eu/ <http://csnetwork.eu/>*) as well as the CSN *Podcast interviews *with many of the BCBT speakers. BCBT caters to students and researchers involved in projects that are in the ambit of "BIO-ICT convergence", "Brain Inspired ICT", "Cognitive systems-robotics". BCBT will offer up to 30 student slots for the practical workshops while as many researchers can register to attend the presentations and discussion sessions as they are interested. The atmosphere of the BCBT summer school is informal with the goal to stimulate in-depth discussion. There are presentations in the morning, usually 2, with the afternoons reserved for tutorials and projects for student participants and road-mapping workshops or further discussion for senior scientists. For the 2014 edition we plan a *1st week* of the school addressing *Evolutionary and Developmental aspects of nervous systems and behavior*(*Session 1*, 1-5 Sept*)*, while the *2nd week* will include presentations aimed at the investigation of *Core Brain Systems* with emphasis on the basal ganglia (*Session 2*, 8-9 Sept) followed by roadmapping sessions (*Session 3*, 10-11 Sept). Friday 12 is reserved for the presentation of the student projects to which everybody is invited. *Application deadline: August 2nd, 2014* For more information, and to apply, please go to http://bcbt.upf.edu/bcbt14/home BCBT2014 is supported by the Convergent Science Network of Biomimetics and Neurotechnology (*http://csnetwork.eu/ <http://csnetwork.eu/>*). and is co-organized by Paul Verschure (BCBT Chair) SPECS, University Pompeu Fabra Barcelona, ES Tony Prescott (BCBT Co-Chair) University of Sheffield, UK Leah Krubizer (BCBT Co-Chair) UC Davis, CA, USA Anna Mura (BCBT Co-Chair) SPECS, University Pompeu Fabra Barcelona, ES

April 25, 2014

Invitation to NeuroFutures Summit - Seattle, June 16-18, 2014.

by Rad Roberts

We are pleased to invite you to the 2014 NeuroFutures Summit. Who/what/why: The NeuroFutures Summit will bring together research, industry, and clinical thought leaders to explore how innovations in neuromodulation, brain mapping, neuroimaging, computational neuroscience, and brain computer interfaces will transform our understanding of neural systems and enable life-changing medical treatments. Participants will learn the state of the art, present and discuss their work, and interact with neurotechnology leaders in a small conference setting. The abstract deadline for poster presenters is May 16th, 2014. Over thirty speakers are confirmed. See agenda below. When: Public lecture 6-8pm June 16th followed by the technical conference on June 17th and 18th, 2014. Where: Hotel Deca and the University of Washington, Seattle, WA. Website: Visit www.neurofutures.us to learn more. We hope you can join us. Sincerely, The organizers: Rad Roberts, Center for Sensorimotor Neural Engineering, University of Washington, Dan Rizzuto, Allen Institute for Brain Science, Bill Rooney, Oregon Health and Science University, and Bobby Heagerty, Oregon Health and Science University. NeuroFutures Summit Agenda June 16th- 18th, 2014 University of Washington, Seattle, WA <http://www.neurofutures.us> www.neurofutures.us Monday, June 16th, 6pm - 8pm Public lecture: The Brain on Circuit Training: Finding and Fixing Misfiring Neural Circuitry. A presentation by Dr. Andres Lozano with an interactive discussion moderated by David Heil. Tuesday, June 17th Functional Mapping Informs BCI and Neuromodulation Innovations Richard Buxton, UCSD, Kim Burchiel, OHSU, Richard Andersen, Caltech Measuring, Mapping, and Modifying Cognitive Function. Justin Sanchez, DARPA, Tom Grabowski, U of Washington, Brian Kopell, Mt. Sinai Hospital. Lunch, posters, informal discussion. Structure and Target Selection in Neuromodulation Chris Kroenke, OHSU, Andres Lozano, U of Toronto, David Newell, Swedish Neuroscience Institute. Mining Shared Neural Data Sets Magali Haas, Orion Bionetworks, Julie Harris, Allen Institute for Brain Science, Mike Hawrylycz, Allen Institute for Brain Science, Paul Fearn, Fred Hutchinson Cancer Research Center. Northwest NeuroNeighborhood Resources and Partnering Opportunities I. Bart Keogh, Radia Inc., Rajesh Rao, U of Washington, John Henson, Swedish Neuroscience Institute. Evening reception at the Burke Museum of Natural History and Culture. Wednesday, June 18th The Past, Present, and Future of Closed-loop Neuromodulation. Milton Morris, Cyberonics, Eberhard Fetz, U of Washington, Tim Denison, Medtronic. Ryder Gwinn, Swedish Neuroscience Institute. De-coding Commands and Learning Modes in the Motor Cortex. Chet Moritz, U of Washington, Jeff Ojemann, U of Washington, Adrienne Fairhall, U of Washington. Neurotechnology Development and Brain Mapping: A Virtuous Cycle Ed Lein, AIBS, Craig Forest, Georgia Institute of Technology. Northwest NeuroNeighborhood Resources and Partnering Opportunities II. Norman Beauchamp, U of Washington. Bob Wilcox, Viket Medical. Lunch, posters, informal discussion. Generating and Handling Large Neural Data Sets. Hanchuan Peng, Allen Institute for Brain Science, Tim Blanche, Allen Institute for Brain Science, Bing Brunton, U of Washington, Matt Reynolds, U of Washington. Neural engineering approaches for hearing, sight, and memory prostheses. Adrian KC Lee, U of Washington, Josh Jacobs, Drexel University

April 25, 2014

Reminder: Abstract submission closes April 27 for Neuroinformatics 2014

by Malin Sandström

Welcome to the 7th INCF Congress of Neuroinformatics in Leiden, the Netherlands, August 25 - 27, 2014 Neuroinformatics 2014 includes keynote lectures (Margarita Behrens, Mitya Chklovskii, Daniel Choquet, Ila Fiete, Michael Milham, and Felix Schürmann), workshops, and a special symposium on population-based neuroimaging, hosted by the INCF Netherlands Node. The last day to submit your abstract is April 27, submit it here: http://www.neuroinformatics2014.org/abstracts Registration is open at http://www.neuroinformatics2014.org/registration Watch the NI2014 promo video: http://www.youtube.com/watch?v=aEudq3SOwK0 We kindly ask that you print and display the congress poster at your institution: it's available for download at http://www.neuroinformatics2014.org/documents/a0_poster_nov_2013 We're looking forward to seeing you in August! -- Malin Sandström, PhD Community Engagement Officer malin.sandstrom(a)incf.org International Neuroinformatics Coordinating Facility Karolinska Institutet Nobels väg 15 A SE-171 77 Stockholm Sweden http://www.incf.org

April 25, 2014

International Workshop on The Versatile Action of Noise, June 22-27, 2014 in Bremen

by Alberto Bernacchia

Dear Colleagues, we are organizing an international workshop on *The Versatile Action of Noise: Applications from Genetic to Neural Circuits* at Jacobs University Bremen, Germany from June 22-27, 2014. http://noise-workshop.user.jacobs-university.de/<https://exchange.jacobs-university.de/owa/redir.aspx?C=gZfK3TmIBkiF8b5kI43d…> Stochastic mechanisms, often summarized under “noise”, are ubiquitous in artificial and biological networks. In applications to genetic circuits the goal is to trace back the various manifestations of noise to a few sources on underlying levels like the stochastic fluctuations in biochemical reactions, to follow the propagation and modification of noise towards the cellular level and to pursue the interaction of different sources of noise with respect to their mutual repression or amplification. In applications to neural systems the focus is on microscopic noise, e.g. the thermal fluctuations on channel dynamics, the effect of synaptic noise on neuronal firing, but also on large-scale collective fluctuations of brain areas, information loss, effects of large-scale noise on attention and decision-making, as well as on bridges between the different levels. A comparison between both types of applications should reveal parallels in how natural systems transform or utilize noise. It is the tools of theoretical physics that provide a deeper understanding of its role, in particular when it acts counterintuitive. Advanced methods from statistical physics and nonlinear dynamics allow for predicting the action of noise on excitable media like neural systems, extinction events in various populations and noise-induced rare events. *We invite applications from graduate students, PhD students and postdocs with a background in theoretical physics, applied mathematics with an interest in biological applications and neuroscience. Applicants from the experimental side should be interested in the mathematical modeling and analysis of experimental data.* The fee is *150 Euro* *for early registration until April 30* and 250 Euro afterwards, including accommodation in the guesthouse on campus and all meals, for the period of the workshop. The workshop is generously supported by the WE-Heraeus foundation. For registration please visit our website. Selected abstracts will be invited for oral presentation, we shall also have poster sessions. Kind regards Hildegard Meyer-Ortmanns and Alberto Bernacchia *Invited speakers:* *Michael Assaf * (*Racah Institute of Physics, Hebrew University of Jerusalem);*Jan Benda* * (Eberhard Karls University, Tübingen);*Michael Breakspear ** (QIMR and UNSW Berghofer, Sidney, Australia);*Thierry Emonet ** (Yale University, New Haven, U.S.A.);*Tobias Galla ** (Manchester University, Manchester);*Jordi Garcia-Ojalvo ** (Universitat Pompeu Fabra, Barcelona );*Benjamin Lindner ** (Humboldt University, Berlin);*Wolfgang Maass * *(Graz Technical University, Graz);*Ralf Metzler * *(Potsdam University, Potsdam);*Sidney R. Nagel* (The University of Chicago, U.S.A.);*Simone Pigolotti* * (Universitat Politecnica de Catalunya, Barcelona);*Joachim Rädler ** (Ludwig Maximilians University, Munich);*Jaime de la Rocha* (*) (Institut D’ Invest. Biomèdiques August Pi i Sunyer, Barcelona);*Lutz Schimansky-Geier**(Humboldt University, Berlin);*Susanne Schreiber**(Humboldt University, Berlin);*Pieter Rein Ten Wolde ** (FOM Institute AMOLF, Amsterdam);*Raúl Toral ** (IFISC, UIB-CSIC, Palma de Mallorca) *confirmed *Topics include:* § The effects of extrinsic noise on cellular decision making; § Correlated fluctuations in genetic networks; § Propagation of noise of sequential gene regulation; § Error rates in biological copying; § Single cell response and decision making under noise; § The generation of transcriptional noise in bacteria; § Costs and benefits of biochemical noise; § Noise in large-scale cortical rhythms; § Noise-induced order in collective neural populations; § Computations by noisy networks of spiking neurons § Noise and irregular firing in cortical circuits; § Cellular mechanisms of temperature-compensation in receptor neurons; § Coherent noise, scale invariance and intermittency in large systems; § Shaping noise for population success; § Quasi-cycles induced by noise; § Interplay between noise and delay. § *Scientific Organization* *Prof. Dr. Hildegard Meyer-Ortmanns*<https://exchange.jacobs-university.de/owa/redir.aspx?C=gZfK3TmIBkiF8b5kI43d…>/ Statistical Physics Group / Jacobs University Bremen gGmbH / School of Engineering and Science / Campus Ring 8 / 28759 Bremen / Germany / Tel: ++49 (0) 421 / 200-3221 / Tel: ++49 (0) 421 / 200-3249 / Email: h.ortmanns(a)jacobs-university.de<https://exchange.jacobs-university.de/owa/redir.aspx?C=gZfK3TmIBkiF8b5kI43d…> *Prof. Dr. Alberto Bernacchia*<https://exchange.jacobs-university.de/owa/redir.aspx?C=gZfK3TmIBkiF8b5kI43d…>/ Computational Neuroscience Group / Jacobs University Bremen gGmbH / School of Engineering and Science / Campus Ring 6 / 28759 Bremen / Germany / Tel: ++49 (0) 421 / 200-3542 / Tel: ++49 (0) 421 / 200-3249 / Email: a.bernacchia(a)jacobs-university.de<https://exchange.jacobs-university.de/owa/redir.aspx?C=gZfK3TmIBkiF8b5kI43d…>

April 24, 2014

Special issue of the Journal of Mathematical Neuroscience

by Olivier Faugeras

Dear all, I am pleased to announce that a Special Issue of the Journal of Mathematical Neuroscience on Uncertainty and the Brain has just appeared in Open Access at: http://www.mathematical-neuroscience.com/series/UB Uncertainty and the Brain Edited by: Dr Olivier Faugeras, Prof Michele Thieullen Theoretical and applied neuroscientists are in great need of stochastic models to account for sources of uncertainty in neural tissues in a mathematically rigorous framework allowing for quantitative descriptions and predictions. Collection published: 17 April 2014 Editorial ** *Editorial for the Special Issue on Uncertainty in the Brain <http://www.mathematical-neuroscience.com/content/4/1/7>* Olivier Faugeras, Michèle Thieullen /The Journal of Mathematical Neuroscience/ 2014, *4*:7 (17 April 2014) ** *Measuring Edge Importance: A Quantitative Analysis of the Stochastic Shielding Approximation for Random Processes on Graphs <http://www.mathematical-neuroscience.com/content/4/1/6>* Deena R Schmidt, Peter J Thomas /The Journal of Mathematical Neuroscience/ 2014, *4*:6 (17 April 2014) Research ** *How Uncertainty Bounds the Shape Index of Simple Cells <http://www.mathematical-neuroscience.com/content/4/1/5>* D Barbieri, G Citti, A Sarti /The Journal of Mathematical Neuroscience/ 2014, *4*:5 (17 April 2014) ** *Fokker--Planck and Fortet Equation-Based Parameter Estimation for a Leaky Integrate-and-Fire Model with Sinusoidal and Stochastic Forcing <http://www.mathematical-neuroscience.com/content/4/1/4>* Alexandre Iolov, Susanne Ditlevsen, André Longtin /The Journal of Mathematical Neuroscience/ 2014, *4*:4 (17 April 2014) ** *Goodness-of-Fit Tests and Nonparametric Adaptive Estimation for Spike Train Analysis <http://www.mathematical-neuroscience.com/content/4/1/3>* Patricia Reynaud-Bouret, Vincent Rivoirard, Franck Grammont, Christine Tuleau-Malot /The Journal of Mathematical Neuroscience/ 2014, *4*:3 (17 April 2014) ** *Large Deviations for Nonlocal Stochastic Neural Fields <http://www.mathematical-neuroscience.com/content/4/1/1>* Christian Kuehn, Martin G Riedler /The Journal of Mathematical Neuroscience/ 2014, *4*:1 (17 April 2014) ** *A Density Model for a Population of Theta Neurons <http://www.mathematical-neuroscience.com/content/4/1/2>* Grégory Dumont, Jacques Henry, Carmen Tarniceriu /Journal of Mathematical Neuroscience/ 2014, *4*:2 (17 April 2014) --------------------------------------------------------------------------------------- : Olivier Faugeras : Professor : Equipe INRIA NeuroMathComp Team : co-editor in chief, Journal of Mathematical Neuroscience : http://www-sop.inria.fr/members/Olivier.Faugeras/index.en.html : Email: olivier.faugeras(a)inria.fr : Tel: +334 92 38 78 31 : Sec: +334 92 38 78 30 : ---------------------------------------------------------------------------------------

April 24, 2014

[RSS2014] CfP: First Workshop on Affordances: Affordances in "Vision for Cognitive Robotics" (in conjunction with RSS 2014)

by Karthik Mahesh Varadarajan

====================================================================== *Call for Papers- First Workshop on Affordances: Affordances in Vision for Cognitive Robotics* (in conjunction with RSS 2014), July 13, 2014, Berkeley, USA http://affordances.info/workshops/RSS.html ====================================================================== Based on the Gibsonian principle of defining objects by their function, "affordances" have been studied extensively by psychologists and visual perception researchers, resulting in the creation of numerous cognitive models. These models are being increasingly revisited and adapted by computer vision and robotics researchers to build cognitive models of visual perception and behavioral algorithms in recent years. This workshop attempts to explore this nascent, yet rapidly emerging field of affordance based cognitive robotics while integrating the efforts and language of affordance communities not just in computer vision and robotics, but also psychophysics and neurobiology by creating an open affordance research forum, feature framework and ontology called AfNet (theaffordances.net) In particular, the workshop will focus on emerging trends in affordances and other human-centered function/action features that can be used to build computer vision and robotic applications. The workshop also features contributions from researchers involved in traditional theories to affordances, especially from the point of view of psychophysics and neuro-biology. Avenues to aiding research in these fields using techniques from computer vision and cognitive robotics will also be explored. Primary topics addressed by the workshop include the following among others - Affordances in visual perception models - Affordances as visual primitives, common coding features and symbolic cognitive systems - Affordances for object recognition, search, attention modulation, functional scene understanding/ classification - Object functionality analysis - Affordances from appearance and touch based cues - Haptic adjectives - Functional-visual categories for transfer learning - Actions and functions in object perception - Human-object interactions and modeling - Motion-capture data analysis for object categorization - Affordances in human and robot grasping - Robot behavior for affordance learning - Execution of affordances on robots - Affordances to address cognitive and domestic robot applications - Affordance ontologies - Psychophysics of affordances - Neurobiological and cognitive models for affordances The workshop also seeks to address key challenges in robotics with regard to functional form descriptions. While affordances describe the function that each object or entity affords, these in turn define the manipulation schema and interaction modes that robots need to use to work with objects. These functional features, ascertained through vision, haptics and other sensory information also help in categorizing objects, task planning, grasp planning, scene understanding and a number of other robotic tasks. Understanding various challenges in the field and building a common language and framework for communication across varied communities in are the key goals of the proposed workshop. Through the course of the workshop, we also envisage the establishment of a working group for AfNet. An initial version is available online at www.theaffordances.net. We hope the workshop will serve to foster greater collaboration between the affordance communities in various fields. *Paper Submissions* Paper contributions to the workshop are solicited in four different formats - *Conceptual papers* (1 page): Authors are invited to submit original ideas on approaches to address specific problems in the targeted areas of the workshop. While a clear presentation of the proposed approach and the expected results are essential, specifics of implementation and evaluations are outside the scope of this format. This format is intended at exchange and evaluation of ideas prior to implementation/ experimental work as well as to open up collaboration avenues. - *Design papers* (3 pages): Authors submitting design papers are required to address key issues regarding the problem considered with detailed algorithms and preliminary or proof-of-concept results. Detailed evaluations and analyses are outside the scope of this format. This format is intended at addressing late-breaking and work in progress results as well as fostering collaboration between research and engineering groups. - *Experimental papers* (3 pages): Experimental papers are required to present results of experiments and evaluation of previously published algorithms or design frameworks. Details of implementation and exhaustive test case analyses are key to this format. These papers are geared at benchmarking and standardizing previously known approaches. - *Full papers* (5 pages): Full papers must be self-inclusive contributions with a detailed treatment of the problem statement, related work, design methodology, algorithm, test-bed, evaluation, comparative analysis, results and future scope of work. Submission of original and unpublished work is highly encouraged. Since the goal of this workshop is to bring together the various affordance communities, extended versions/ summary reports of recent research published elsewhere, as adapted to the goals of the workshop, will also be accepted. These papers are required to clearly state the relevance to the workshop and the necessary adaptation. The program will be composed of oral as well as Pecha-Kucha style presentations. Each contribution will be reviewed by three reviewers through a single-blind review process. The paper formatting should follow the RSS formatting guidelines (Templates: Word<http://www.roboticsconference.org/paper-template-word.zip> andLaTeX <http://www.roboticsconference.org/paper-template-latex.tar.gz>). All contributions are to be submitted via Microsoft Conference Management Tool <https://cmt.research.microsoft.com/A2014/Default.aspx> in PDF format. Appendices and supplementary text can be submitted as a second PDF, while other materials such as videos (though, preferably as links on vimeo or youtube) as a zipped file. All papers are expected to be self-inclusive and supplementary materials are not guaranteed to be reviewed. Please adhere to the following strict deadlines. In addition to direct acceptance, early submissions may be conditionally accepted, in which case submission of a revised version of the paper based on reviewer comments, prior to the late submission deadline is necessary. The final decision on acceptance of such conditionally accepted papers will be announced along with the decisions for the late submissions. *Important Dates* - Initial submissions (Early): 23:59:59 PDT May 5, 2014 - Notification of acceptance (Early submissions): May 15, 2014 - Initial submissions (Late): 23:59:59 PDT May 27, 2014 - Notification of acceptance (Late submissions): June 5, 2014 - Submission of publication-ready version: June 10, 2014 - Workshop date: July 13, 2014 *Organizers* Karthik Mahesh Varadarajan <http://www.karthikmahesh.com/> (varadarajan(at) acin.tuwien.ac.at), TU Wien Markus Vincze <http://www.acin.tuwien.ac.at/index.php?id=231&L=1> (vincze(at)tuwien.ac.at), TU Wien Trevor Darrell <http://www.eecs.berkeley.edu/~trevor/> (trevor(at) eecs.berkeley.edu) UC. Berkeley Juergen Gall <http://www.vision.ee.ethz.ch/~gallju/>(gall(at)iai.uni-bonn.de), Univ. Bonn *Speakers and Participants* (To be updated) Abhinav Gupta (Affordances in Computer Vision), Carnegie Mellon University Ashutosh Saxena (Affordances in Cognitive Robotics), Cornell University Lisa Oakes (Psychophysics of affordances)*, UC. Davis TBA (Neurobiology of affordances)* *Program Committee* Irving Biederman (USC) Aude Olivia (MIT) Fei-Fei Li (Stanford University) Martha Teghtsoonian (Smith College) Derek Hoiem (UIUC) Barbara Caputo (Univ. of Rome, IDIAP) Song-Chun Zhu (UCLA) Antonis Argyros (FORTH) Tamim Asfour (KIT) Michael Beetz (TUM) Norbert Krueger (Univ. of Southern Denmark) Sven Dickinson (Univ. of Toronto) Diane Pecher (Erasmus Univ. Rotterdam) Aaron Bobick (GeorgiaTech) Jason Carso (UB New York) Juan Carlos Niebles (Universidad del Norte) Tamara Berg (UNC Chapel Hill) Moritz Tenorth (Univ. Bremen) Dejan Pangercic (Robert Bosch) Roozbeh Mottaghi (Stanford) Alireza Fathi (Stanford) Xiaofeng Ren (Amazon) David Fouhey (CMU) Tucker Hermans (Georgia Tech) Tian Lan (Stanford) Amir Roshan Zamir (UCF) Hamed Pirsiavash (MIT) Walterio Mayol-Cuevas (Univ. of Bristol)

April 23, 2014

new MATLAB toolbox for Granger causality analysis

by Anil Seth

Dear all, Lionel Barnett and I are pleased to announce the availability of our wholly new MATLAB toolbox for implementing Granger causality analysis. This new free software is a wholesale revision of my previous ‘GCCA’ toolbox which has been available since 2010 (http://www.ncbi.nlm.nih.gov/pubmed/19961876) and which has enjoyed a wide uptake within the neuroscience community and beyond. Granger causality is a powerful analysis method which can be used to detect directed functional connectivity in stationary time-series data, of the sort often (but not always) found in neuroscience datasets. The new ‘multivariate Granger causality’ ‘MVGC’ toolbox offers a range of enhancements. It easily handles conditional spectral analyses. It requires only estimation of the ‘full’ regression model, avoiding biases inherent in estimation of both full and reduced models. It is accompanied by a fully functional help system integrated into the online MATLAB documentation. And much else besides. The toolbox can be downloaded here: http://www.sussex.ac.uk/sackler/mvgc/ A paper describing the toolbox and the basic concepts and maths underlying Granger causality has been recently published in Journal of Neuroscience Methods: http://www.sciencedirect.com/science/article/pii/S0165027013003701 … which is the appropriate citation for any published work utilizing the software. Preparation of the toolbox was supported by the Sackler Centre for Consciousness Science, which is funded by the Dr. Mortimer and Dame Theresa Sackler Foundation. We hope you find it useful! Best regards Anil Seth and Lionel Barnett ------------------------------------------- Anil K. Seth, D.Phil. Professor of Cognitive and Computational Neuroscience Co-Director, Sackler Centre for Consciousness Science University of Sussex www.anilseth.com<http://www.anilseth.com> a.k.seth(a)sussex.ac.uk<mailto:a.k.seth@sussex.ac.uk>

April 23, 2014

DecMeg2014 data analysis competition

by Emanuele Olivetti

DecMeg2014 data analysis competition Biomag 2014 Decoding Challenge - Brain Decoding Across Subjects https://www.kaggle.com/c/decoding-the-human-brain Decoding mental states from functional neuroimaging data is a data analysis paradigm adopted both in neuroscience studies and in brain-computer interface applications. Decoding means determining, from the recorded brain activity, what stimulus was provided to a subject. In this competition, a large number of trials, from a face vs. scrambled face visual task, are available from multiple subjects. The brain activity was recorded by means of magnetoencephalography (MEG). MEG recordings from various subjects and the category of the associated visual stimuli are given to the participants of the competition in order to train their prediction algorithms. With their algorithms, the participants will have to predict the category of the stimulus of a different set of MEG recordings, from other subjects. Each submission to the competition will be scored according to the accuracy of prediction. Decoding across subjects is a difficult task because of the variability in head shape, cortical folding and functional organisation. For MEG data, the literature on decoding across subjects is still in early stages and this competition aims at raising the awareness about this complex scientific problem. This competition is associated with the the 19th International Conference on Biomagnetism, Biomag 2014, Halifax (Canada), August 24-28, 2014. The competition begins: April 21st, 2014. The competition ends: July 27th, 2014. Prizes: 1st 3,000 USD, 2nd 1,500 USD, 3rd 500 USD. Organizers: Emanuele Olivetti, Seyed Mostafa Kia and Paolo Avesani (NeuroInformatics Lab, Bruno Kessler Foundation and University of Trento, IT), e-mail: decmeg2014(a)list.fbk.eu . Scientific steering committee: Ole Jensen (Donders Institute, NL), Nathan Weisz (University of Trento, IT), Richard Henson (MRC/CBU, UK) and Alexandre Gramfort (Telecom ParisTech, CNRS, CEA / Neurospin). We would also like to thank Daniel Wakeman (Martinos Center, MGH, USA). The awards for this competition are funded by Elekta Oy, MEG International Services Ltd (MISL), Fondazione Bruno Kessler and Besa Gmbh. Relevant links: - competition website: https://www.kaggle.com/c/decoding-the-human-brain - Biomag 2014: http://www.biomag2014.org - NeuroInformatics Lab: http://nilab.fbk.eu - Elekta Oy: http://www.elekta.com - MISL (CTF MEG): http://www.ctfmeg.com - Fondazione Bruno Kessler: http://www.fbk.eu - Besa GmbH: http://www.besa.de Please feel free to forward this message to your colleagues or contacts who might be interested in this competition.

April 22, 2014

NEURON Summer Course deadline approaching

by Ted Carnevale

The early registration deadline for the NEURON Summer Course is Friday, May 9, less than three weeks from today. Applicants who sign up by that date are eligible for reduced registration fees. NEURON Fundamentals June 21-24 This course shows how to model individual neurons and networks of neurons, and introduces parallel simulation. The early registration fee is $1050, but after May 9 registration goes up to $1200. Parallel Simulation with NEURON June 25-26 This is for users who are already familiar with NEURON and now need to parallelize an existing model or create a new model that will run on parallel hardware. The early registration fee is $650, but after May 9 it goes up to $750. Sign up for both courses by May 9 and pay only $1600, or wait until May 10 or later and pay $1800. Registration is limited, and the final registration deadline is Friday, May 30, 2014. For more information about these courses see http://www.neuron.yale.edu/neuron/courses or contact Ted Carnevale ted dot carnevale at yale edu 203-494-7381

April 22, 2014

CoSMo 2014: application deadline approaching!

by Gunnar Blohm

Just a quick reminder that the application deadline for the summer school on Computational Sensory-Motor Neuroscience (CoSMo 2014) is approaching fast: Apr 28, 2014!!! http://www.compneurosci.com/CoSMo/ Best Gunnar Blohm, Konrad Körding, Paul Schrater -- ------------------------------------------------------- Dr. Gunnar BLOHM Assistant Professor in Computational Neuroscience Centre for Neuroscience Studies, Departments of Biomedical and Molecular Sciences, Mathematics & Statistics, and Psychology, School of Computing, and Canadian Action and Perception Network (CAPnet) Queen’s University 18, Stuart Street Kingston, Ontario, Canada, K7L 3N6 Tel: (613) 533-3385 Fax: (613) 533-6840 Email: Gunnar.Blohm(a)QueensU.ca Web: http://www.compneurosci.com/

April 22, 2014