October 2014 - Comp-neuro - lists.cnsorg.org

Postdoctoral Position in Neuroscience (BRAIN Initiative project): In vivo imaging of cortical dynamics

by Patrick Kanold

Dear all, A postdoctoral position utilizing in vivo 2-photon imaging is available in the laboratory of Dr. Patrick Kanold at the University of Maryland. The laboratory studies the function, development, and plasticity of the cerebral cortex (http://www.kanold.org) We are seeking highly motivated individuals that want to join exciting collaborative project, together with Dr. Dietmar Plenz (NIMH, http://www.nimh.nih.gov/labs-at-nimh/principal-investigators/dietmar-plenz.…) and Dr. Wolfgang Losert (UMd Physics), funded by the NIH BRAIN initiative. We use in vivo 2-photon imaging and stimulation technology that allows rapid imaging and stimulation in multiple focal planes and aim to develop new analysis techniques based on dynamic systems and graph theoretic measures to extract network dynamics at the single neuron and population level. We aim to identify the influence of single neurons relative to the synergistic influence of specific groups of neurons (the crowd) on network dynamics and ultimately behavior of the animal (see http://www.clfs.umd.edu/biology/kanold/Research.html) The ideal candidate will have a PhD in neuroscience, engineering, or related discipline, a background in systems neuroscience, and an ability to work in a large multidisciplinary team. Special considerations are given to applicants with training in imaging, in vivo physiology, computational approaches, and programming skills (esp. MATLAB). Qualified individuals should send a copy of curriculum vitae and names of three references to pkanold(a)umd.edu.

Oct. 31, 2014

Postodoctoral Position in Computational Neuroscience of Alcohol Addiction (ENS-Paris France- Indiana USA)

by GUTKIN Boris

A postdoctoral position is available for a USA-France collaborative project on the influence of alcohol on the central dopamine system. The project combines computational and experimental techniques. The post-doc will design and analyze a biophysical computational models of the brain circuitry affected by alcohol. The position is available immediately for up to three years. The position is based at the Group for Neural Theory, Ecole Normale Superieure Paris France, with extensive research visits between two institutions: Indiana University-Purdue University at Indianapolis, Indiana, USA, and École Normale Supérieure, Paris, France. In Paris, he or she will work with Prof. Gutkin (Group of Neural Theory, ENS) and Prof. Mamelli (Institut du Fer a Moulin, INSERM) on circuit level models. In Indianapolis, the post-doc will work with Prof. Kuznetsov (Mathematics Dept.) and Prof. Lapish (Psychology Dept.) on cellular level models. Both locations provide an excellent environment for collaborative research in quantitative biosciences. Ample travel support, competitive salary and full social coverage is offered. Qualifications: Applicants should have a Ph.D. in Computational Neuroscience, Mathematics, Physics, or a quantitative field, a background in dynamical systems, programming experience and working knowledge in Computational Neuroscience. How to Apply: Send your CV, list of publications, research statement, and contact information for three references to Prof. Boris Gutkin via e-mail: boris.gutkin(a)ens.fr.

Oct. 31, 2014

USA-Israel Postdoctoral Position

by Jean-Marc

*Postdoctoral Position* University of Arizona and University of Haifa The Computational and Experimental Neuroscience Laboratory is looking to fill a position for a Postdoctoral Research Fellow. The research project is geared towards understanding the role of hippocampal replay in spatial navigation and memory consolidation during sleep. The techniques used include high density electrophysiology in the behaving rat, neuropharmacology, optogenetics and computational modeling. The project is multidisciplinary and involves collaborations with research teams in the USA and France (Univ. South Florida Tampa, INSERM Lyon France, Harvard Univ MA, UCSD, UCR and Salk, California). Good communication skills are necessary. This is a joint position between the University of Haifa (Israel) and the University of Arizona (Tucson, USA). The successful candidate will be expected to spend part of his/her time in the USA and in Israel. Basic knowledge of Hebrew will be helpful. Applicants with a subset of the following skill set are strongly encouraged to apply: - Scientific expertise or interests in hippocampus and/or prefrontal-cortex - Electrophysiology (in vivo chronic behaving, or in vitro) - Behavioral Neuroscience (rat training/testing) - General laboratory skills (e.g. histology, surgery) - Matlab and/or NEURON programming and spike-data analyses Applicant should send a cover letter, CV and the names of at least 2 references to Dr. Jean-Marc Fellous (fellous at email.arizona.edu) Salary is competitive and commensurate with experience. The search is ongoing and is projected to be completed by November 30th, 2014. Information about the laboratory can be found at: http://amygdala.psychdept.arizona.edu/lab.html

Oct. 30, 2014

PhD in interdisciplinary ML / Robotics / BCI project

by Michael Tangermann

Dear colleagues, there is a new offer for an interdisciplinary Machine Learning / BCI / Robotics PhD position in Freiburg. Please circulate it in your lab and email lists. Thanks a lot, Michael --- snip --- Doctoral Research Position at the University of Freiburg, Germany The University of Freiburg invites candidates to apply for a fully funded three-year PhD position (TV-L E13). The job offers a novel perspective to relevant problems in robotics in an inter-disciplinary approach involving engineering, artificial intelligence / machine learning, neuroscience and assistive technology. The interaction between a (semi-autonomous) robotic device (e.g., a robotic wheelchair) and a human user is often ruled by a set of strategies executed by the robot. Typical robotic tasks are to accomplish a navigation task, to map the environment or to manipulate objects of the environment. The user may either control the actions of the robot or be an interaction partner for the robot. The level of control the user has over the robot's actions can be placed on the continuum between absolute low-level control (e.g., a joystick), over mid-level control ("turn right on next occasion") up to high-level control ("take me to the kitchen"). While state-of-the-art robotic control already takes the changing environment into account before strategies are selected and executed, the internal state of the user and fluctuations thereof typically are disregarded. Examples of informative mental states of users would be the level of task-induced workload, the sense of control/agency in the current situation or the perceived complexity of the current situation. In the project, relevant internal mental states of the user shall continuously be assessed. Therefore, electrophysiological recordings (e.g., EEG, MEG, GSR, HRV, etc.) will be exploited with methods developed in the field of brain-computer interface (BCI) systems. Upon successful decoding of a mental state of interest, the robotic behavior can be adapted specifically to an individual user and to the perceived situation. Using the resulting co-adaptive strategy between human and robot, we expect an enhancement of usability and user acceptance during various tasks in human-robot interaction. During the project, expected tasks will comprise offline experiments with assessment of electrophysiological signals, simulated robotic control, offline and online data analysis with BCI methods, online experiments with a robotic application and mental state monitoring, evaluation of adaptive strategies of the robot. The candidate is expected to actively participate in the dissemination of research results in publications, on conferences and by teaching. The target group are candidates with a degree at master level in robotics, computer science, artificial intelligence / machine learning, electrical engineering or cognitive science, with a strong relation to science, technology or innovation studies. Candidates are expected to have practical experience in all of the three fields robotics, machine learning/AI, and Brain-Computer Interfaces. We furthermore expect outstanding qualifications, the motivation to obtain a Doctoral degree and the interest to work in an interdisciplinary environment. Finally we require applicants to have excellent communication skills in English. Applications should be send to ais-applications(a)informatik.uni-freiburg.de. The application documents should consist of a single PDF file and include - Motivation letter (Expose, respectively) - Two letters of recommendation from professors or persons authorized to supervise dissertation projects - Curriculum vitae - Copies of the following documents: a. Higher education entrance qualification (school-leaving certificate) b. University examination certificates (intermediate examinations) c. University diploma d. Any documents providing evidence of academic achievements, relevant practical experience, and qualifications earned at or outside of the university Further information can be obtained from Wolfram Burgard and Michael Tangermann ({burgard|tangerm}(a)informatik.uni-freiburg.de)

Oct. 29, 2014

Neurocontrol Frontiers Research Topic, Call for Papers

by Ritt, Jason T

Hello comp-neuro, Daniel Moran, ShiNung Ching and I are guest editing a Research Topic in the journal Frontiers in Neuroscience/Neuroprosthetics, titled "From Neurostimulation to Neurocontrol: Advances and Challenges in Adapting Control Theory to the Brain”: http://www.frontiersin.org/Neuroprosthetics/researchtopics/From_neurostimul… We encourage all interested in advancing the theory of control of neural systems to consider submitting an article to this Research Topic. Frontiers articles are published upon acceptance, without waiting for other submissions to finish peer review, and are available open access. To find more information on the Topic or submission process, please follow the link above, and/or email me. Cheers, Jason Ritt, Boston University, jritt(a)bu.edu with Daniel Moran, Washington University, St. Louis ShiNung Ching, Washington University, St. Louis --- Jason Ritt Assistant Professor Department of Biomedical Engineering Boston University 44 Cummington Mall Boston MA 02215 jritt(a)bu.edu 617-353-5903 (office) http://www.bu.edu/dbin/bme/people/primary/ritt.php

Oct. 29, 2014

2014 SFN Mtg Workshop: Portal for parallel simulations

by Ted Carnevale

A few seats remain open for the workshop Using the Neuroscience Gateway Portal (NSG) for Parallel Simulations which will be held on the morning of Saturday, November 15, 2014, from 9 AM to Noon in Washington DC as a satellite to the SFN 2014 meeting. The NSG is being developed with suport from NSF to help neuroscientists access high performance computing resources. Several parallel simulators are already installed, including Brian, NEST, NEURON, PGENESIS, and PyNN, and more are planned for the future. Find out how the NSG makes it easy to get allocations of free CPU time, upload your model, launch and monitor jobs, and download results. The registration deadline is Friday, Oct. 31, so you'll need to act quickly. See http://www.neuron.yale.edu/neuron/static/courses/nsg2014/nsg2014.html for further details and the registration form. --Ted

Oct. 28, 2014

Postdoctoral Position in Neuroengineering and Cognitive Engineering at the SiNAPSE Institute, Singapore

by Justin Dauwels (Asst Prof)

Postdoctoral Position in Neuroengineering and Cognitive Engineering at the SiNAPSE Institute, Singapore Inquiries and applications are invited from highly productive, creative and ambitious young scientists for a postdoctoral fellowship in the recently launched the SiNAPSE Institute (www.sinapseinstitute.com<http://www.sinapseinstitute.com>) - a multidisplinary research Institute devoted to research on neurotechnologies, cognitive sciences, neuroengineering, and translational and clinically motivated research at the National University of Singapore under the direction of Prof. Nitish Thakor (www.jhu.edu/nthakor<http://www.jhu.edu/nthakor>). For this project, the postdoctoral fellow is expected to interact with PIs at the SiNAPSE Institute (Profs Nitish Thakor and Anastasios Bezerianos), as well as collaborators at Nanyang Technological University (Prof. Justin Dauwels and others) and International Collaborators (Prof. Hasan Al-Nashash). Candidates with a PhD degree in Electrical and Computer Engineering, Computer Science, Neurosciences or Neuroengineering with outstanding skills and credentials are invited to apply for appropriate positions in the Institute. The main objectives of the research project are (but not limited to): 1. Cognitive science studies involving attention, vigilance, benefits of training, novel modes of cognitive enhancement and learning. 2. Mathematical modeling of brain connectome from EEG, ERP, fNIR and fMRI, 3. Principled statistical models for merging different brain imaging modalities (EEG/MEG/fMRI/DTI). The researchers will have access to impressive financial and physical resources, including noninvasive human and small animal experimental facilities, laboratory instrumentation, computing and imaging resources, and additional project-specific discretionary funding. SINAPSE will provide excellent work conditions (an environment about 20 collaborative PIs and more than 100 researchers in steady state). The salaries will be internationally competitive and commensurate with experience, and health insurance coverage as well as travel to international conferences will be included. Interested researchers and fellows should contact as soon as possible Prof. Nitish Thakor (sinapsedirector(a)gmail.com<mailto:sinapsedirector@gmail.com>) and Justin Dauwels (jdauwels(a)ntu.edu.sg<mailto:jdauwels@ntu.edu.sg>) sending a CV with two external references and a letter of accomplishments, motivation and career goals. ________________________________ CONFIDENTIALITY: This email is intended solely for the person(s) named and may be confidential and/or privileged. If you are not the intended recipient, please delete it, notify us and do not copy, use, or disclose its contents. Towards a sustainable earth: Print only when necessary. Thank you.

Oct. 27, 2014

Research Associate in Neuroscience, University of Leicester

by Atkinson, Sue

Dear Colleagues, We are recruiting for a Research Associate here at the Centre for Systems Neuroscience, University of Leicester. You will work on calcium imaging (2-photon) and electrophysiology recordings in mice as part of the research activities of the Centre for Systems Neuroscience. Research will be done in collaboration with the Department of Cell Pharmacology and Physiology (Ian Forsythe). The project aims to use a virtual navigation environment for the head restrained mice to record neuronal activity in the mouse hippocampus whilst the animal performs different tasks. The work will be performed in synergy with experiments done in humans ("concept cells") to gain a deeper understanding of perception and memory processes. You will contribute to imaging and electrophysiology data collection and analysis, as well as the design of the experiments and overall setup of the system. In particular you will work on the development and optimization of advance methods for the analysis of the data. You will have, or be close to completing, a PhD in an area related to Neuroscience or signal processing (physics, mathematics, engineering, computer sciences). You will also have good programming skills, particularly in Matlab, and ideally you have experience in neurophysiology and imaging recording. Informal enquiries are welcome and should be made to Sue Atkinson on sam45(a)le.ac.uk or 0116 252 3249. The closing date for this post is midnight on 24 November 2014. Click here and search on the reference number SEN00519 for more information and to apply. http://www2.le.ac.uk/offices/jobs/opportunities/jobsearch Sue ------------------------------------------------------------------------------------- Susan Atkinson Centre Manager Centre for Systems Neuroscience, University of Leicester, 9 Salisbury Road, Leicester, LE1 7QR, UK T: +44 116 252 3249 E: sam45(a)le.ac.uk<mailto:sam45@le.ac.uk> W: http://www2.le.ac.uk/centres/csn [cid:image001.jpg@01CFF1FC.B7D361D0] Elite without being elitist Follow us on Twitter<https://twitter.com/uniofleicester> or visit our Facebook<http://www.facebook.com/uniofleicester> page

Oct. 27, 2014

PhD opportunities in Computational Neuroscience

by Clopath, Claudia

Computational Neuroscience Laboratory Headed by Dr. Claudia Clopath Department of Bioengineering Imperial College London -----------------Requirements:----------------- The Computational Neuroscience Laboratory, headed by Dr. Claudia Clopath, is looking for a talented PhD student, interested in working in the field of computational neuroscience, specifically addressing questions of *learning and memory*. The perfect candidate has a strong mathematical, physical or engineering background (or equivalent), and a keen interest in biological and neural systems. Demonstrated programming skills are a plus. -----------------Research topic:----------------- Learning and memory are among the most fascinating topic of neuroscience, yet our understanding of it is only at the beginning. Learning is thought to change the connections between the neurons in the brain, a process called *synaptic plasticity*. Using mathematical and computational tools, it is possible to model synaptic plasticity across different time scales, which helps understand how different types of memory are formed. The PhD candidate will be working to build those models of synaptic plasticity, and study the functional role of synaptic plasticity in artificial neural networks. They will have the opportunity to collaborate with experimental laboratories, which study connectivity changes and behavioural learning. Candidates should be EU nationals. ----------------- The lab:----------------- The Computational Neuroscience Laboratory is very young and dynamic, and publishes in prestigious journals, such as Nature and Science. It is part of the Department of Bioengineering, which conducts state-of-the-art multidisciplinary research in biomechanics, neuroscience and neurotechnology. The lab is at *Imperial College London*, the 3rd ranked university in Europe, is in the top 10 worldwide, and is located in the city centre of London. More information can be found at: http://www.bg.ic.ac.uk/research/c.clopath/lab/index.html<http://www.bg.ic.ac.uk/research/c.clopath/>

Oct. 27, 2014

Neucomp 2015 CFP (in conjunction with DATE'15 conference)

by Jeff Krichmar

Dear CompNeuro, This CFP may be of interest to many of you. Best regards, Jeff Krichmar Department of Cognitive Sciences 2328 Social & Behavioral Sciences Gateway University of California, Irvine Irvine, CA 92697-5100 jkrichma(a)uci.edu http://www.socsci.uci.edu/~jkrichma Begin forwarded message: > From: Philippe Coussy <philippe.coussy(a)univ-ubs.fr> > Subject: Neucomp 2015 CFP (in conjunction with DATE'15 conference) > Date: October 23, 2014 at 4:25:07 PM GMT+2 > To: Nikil Dutt <dutt(a)ics.uci.edu>, Jeff Krichmar <jkrichma(a)uci.edu>, Philippe Coussy <philippe.coussy(a)univ-ubs.fr> > > ---------------------------------------------------------------------------- > Apologies in advance for any duplicate announcements > ---------------------------------------------------------------------------- > > CALL FOR POSTER ABSTRACTS > > 2nd International Workshop on Neuromorphic and Brain-Based Computing Systems (NeuComp 2015) > http://www.date-conference.com/conference/workshop-w03 > Friday March 13, 2015, Grenoble, France > > held in conjunction with DATE'15 conference > (http://www.date-conference.com) > > > **Description** > Biological neural systems are well known for their robust and power-efficient operation in highly noisy environments. Biological circuits are made up of low-precision, unreliable and massively parallel neural elements with highly reconfigurable and plastic connections. Two of the most interesting properties of the neural systems are its self-organizing capabilities and its template architecture. Recent research in biologically-plausible neural networks has demonstrated interesting principles about learning and neural computation. Understanding and applying these principles to practical problems is only possible if large-scale neural simulators or circuits can be constructed. This workshop will outline key modelling abstractions for the brain and focus on recent neural network models. Aspects of neuronal processing and computational issues related to modelling these processes will be discussed. Hardware and software solutions readily usable by neuroscientists and computer scientists and efficient enough to construct very large networks comparable to brain networks will be presented. > > > **Target Audience and Workshop Format** > NeuComp 2015 is the second edition of a DATE workshop designed to attract both newcomers to neuromorphic computing, as well as neuromorphic researchers who wish to interact with the DATE community to stimulate new ideas, topics and collaborations. Since this is a hot area but one that is probably new to a large segment of the DATE community, half of the workshop will be devoted to a comprehensive introduction to Neuromorphic and Brain-Based Computing, where the audience will be exposed to basic definitions, key concepts, abstractions, design flows, and design constraints; also some highly visible research projects will be presented as exemplars to provide an overview of existing and emerging solutions in this domain. The other half of the event will create a forum for interactive discussion and exchange of ideas and experiences between researchers through posters and demonstrations, with the goal of highlighting details on applicability, performance, and strengths of current solutions. Our aim is for attendees to learn about emerging Neuromorphic and Brain-Based computing techniques, highlight publicly available modelling and simulation tools, and view directions for longer term research. > > > **Topics of interest** > Authors are invited to submit original unpublished works on topics from a wide range of Neuromorphic and Brain-Based computing areas, including but not limited to: > - Formal models > - Hardware architectures > - Software tools > - Systems and applications > - Simulation Infrastructures > > > **Submission** > Submissions are invited in the form of 2-page extended abstract describing the novelties and advantages of the work. > Submissions must be done through Easychair at https://easychair.org/conferences/?conf=neucomp2015 > All submissions will be evaluated with regard to their suitability for the workshop, originality and technical soundness. Selected submissions will be accepted for oral presentation and/or poster/interactive presentations. This workshop does not require blind submissions. Informal proceedings with accepted papers will be made available at the workshop as detailed below. > > > **Important dates** > - Submission deadline October 30th, 2014 > - Notification of acceptance November 30th, 2015 > - Final program December 15th, 2015 > > > **Informal Workshop Digest** > NeuComp 2015 will distribute an informal workshop digest to all workshop participants. NeuComp 2015 presenters are encouraged to submit papers for inclusion in this informal workshop digest. > Note that since the informal workshop digest is only distributed to workshop participants (and is not archived as part of DATE or ACM/IEEE digital libraries), authors are free to submit their work to other archival conferences and journals. > > > **Proceedings** > Selected results of the two first editions of Neucomp will be published in form of an edited book by Springer. > > > **Workshop format** > The workshop will combine oral and interactive sessions (posters and demonstrations) together with invited talks representing major neuromorphic research projects. The event will be designed to be highly interactive, with ample time for discussion and cross-disciplinary engagement. > > > **Confirmed Invited speakers** > - Romain Brette (ENS, FR) > - Kristofor Carlson (UCI, US) > - Jörg Conradt (TU Munich, DE) > - Steve Furber (Manchester Univ., UK) > - Todd Hylton (Brain Corporation, US) > - Giacomo Indiveri (ETHZ, CH) > - Anders Lansner (KTH, SW) > - Rajit Manohar (Cornell Univ., US) > > > **General Co-chairs** > Philippe Coussy Université de Bretagne-Sud/Lab-STICC, FR > Nikil Dutt University of California – Irvine, Irvine, CA USA > > > **Preliminary Technical Program Committee** > Jeff Krichmar University of California – Irvine, Irvine, USA (Program Co-Chair) > Philippe Coussy Université de Bretagne-Sud/Lab-STICC, FR (Program Co-Chair) > > Angelo Arleo Université Pierre et Marie Curie, FR > Romain Brette ENS Paris, FR > Gert Cauwenberghs UCSD, USA > Yiran Chen University of Pittsburgh, USA > Jorg Conradt TU Munich, GER > Nikil Dutt UC Irvine, USA > Steve Furber Manchester University, UK > Karlheinz Meier Heidelberg University, GER > Vijaykrishnan Narayanan Pennsylvania State University, USA > Narayan Srinivasa HRL, USA > Massimiliano Versace Boston University, USA > > > If you have any questions about the workshop, please contact philippe.coussy(a)univ-ubs.fr > > **Previous edition** > For more information about Neucomp 2013 program, see > http://www-labsticc.univ-ubs.fr/~coussy/neucomp2013/ > > > -- > ================================================ > Pr. Philippe COUSSY > > Université de Bretagne-Sud - UEB > Laboratoire Lab-STICC - CNRS, UMR 6285 > Centre de Recherche - BP 92116 > F-56321 Lorient Cedex - FRANCE > > Phone +33 (0)2 97 87 45 65 > Web http://www-labsticc.univ-ubs.fr/~coussy/ > ================================================ > > >

Oct. 24, 2014