- Comp-neuro - lists.cnsorg.org

Program and preliminary schedule for CNS*2021 Online
by Martin Zapotocky June 27, 2021

June 27, 2021

**Organization for Computational Neurosciences 2885 Sanford Ave SW #15359 Grandville, MI 49418 USA*** Program and preliminary schedule available for 30th Annual Computational Neuroscience Meeting (CNS*2021 Online, **July 3-7)***** The program of the CNS*2021 Meeting can now be viewed at https://www.cnsorg.org/cns-2021-calendar <https://www.cnsorg.org/cns-2021-calendar> Please note that this year, the main days of the meeting (*July 3-7*) are preceded by software tutorials on *J**une 28-29*, and satellite tutorials on *June 30 - July 2*. For registration information, please visit https://www.cnsorg.org/cns-2021-registration-fees <https://www.cnsorg.org/cns-2021-registration-fees> Following registration, the attendees can use the conference Sched page to access detailed information for each session and to assemble a personalized schedule. Instructions are sent upon registration. Please follow the Sched page for up-to-date information on the event schedule. -------------------------------------------------------------------------------------------- OCNS is the international member-based society for computational neuroscientists. Become a member to be eligible for awards and other benefits. Visit our website for more information: https://www.cnsorg.org <https://www.cnsorg.org> -------------------------------------------------------------------------------------------- ------------------------------------------------------------------------

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Open postdoctoral position in Niv lab at Princeton University
by Angela Langdon June 25, 2021

June 25, 2021

The lab of Dr Yael Niv in the Princeton Neuroscience Institute and Department of Psychology at Princeton University is looking for a talented and motivated postdoctoral researcher to join our team to study the neural mechanisms of reward prediction and learning in animals. This position is to work primarily with Dr Angela Langdon on a NIDA-funded project modeling behavior and neural recording data from rodents in a reward learning task (start date: as soon as possible). The ideal candidate will 1) have experience in computational or theoretical modeling, such as reinforcement learning, Bayesian inference, machine learning and/or neural circuit modeling; 2) be excited about mapping theories of learning and decision making onto behavior and its neural basis; 3) be keen to work in a collaborative and interdisciplinary scientific environment. More broadly, members of the lab study the behavioral and neural computations that support learning and decision making, and their interaction with attention and memory mechanisms. Our research spans a diverse set of theoretical tools from reinforcement learning, Bayesian inference and machine learning alongside various empirical techniques, including targeted behavioral experiments, eye tracking and fMRI. In addition, we work closely with our collaborators on model-guided analysis of animal behavior and neural activity across a number of learning paradigms – the current position is for a project in this domain, working with existing neural and behavioral data from rodents. We have a particular interest in research that can shed light on the changes to learning and decision making that are prevalent in a range of clinical disorders. The Princeton Neuroscience Institute and the Psychology Department at Princeton are highly interdisciplinary and collaborative, and provide excellent support for career development. You will be joining a vibrant and international research group, and will have opportunities to interact with and learn from a large number of researchers in cognitive and computational neuroscience. To apply, send your CV and statement of research interests to Yael Niv: yael(a)princeton.edu <mailto:yael@princeton.edu> and Angela Langdon: alangdon(a)princeton.edu <mailto:alangdon@princeton.edu>.

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Workshop on Clinical Computational Neuroscience at OCNS*2021
by Laure Buhry June 25, 2021

June 25, 2021

Dear all, We would like to announce the Workshop on *“Clinical computational neuroscience: How computational neuroscience can solve problems from the clinic”,* which will be held on *July 7th* during the OCNS annual meeting from 9:30 am to 5:45 am (Paris time) / 3:30 am to 11:45 am (NY time)/ 5:30 pm to 1:45 am (Sydney time). Please keep in mind that for workshop attendance a registration at the main conference (https://www.cnsorg.org/cns-2021-registration-fees) is necessary. More information here: https://xenia-kobeleva.com/CNS2021/ We would love to see you there! Organizing Committee: Laure Buhry (co-chair) Xenia Kobeleva -- Dr Laure Buhry Associate Professor LORIA UMR CNRS 7503 - INRIA - University of Lorraine, France

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Postdoc position in neuronal network modelling and simulation
by Andrew Davison June 24, 2021

June 24, 2021

Dear colleagues, A postdoc position in neuronal network modelling and simulation is available within the Neuroinformatics research group of the Paris-Saclay Institute of Neuroscience, as part of the Human Brain Project (https://neuropsi.cnrs.fr/en/departments/icn/group-leader-andrew-davison/) The large number of different simulation environments in neuroscience presents both a problem and an opportunity. Since each simulator has its own programming interface and output data format, reproducing, reusing, or combining models written for different simulators typically presents considerable difficulty. On the other hand, since each simulation environment has a different balance between efficiency, flexibility, scalability and user-friendliness, we can choose the most appropriate one for a given problem, or cross-check the results obtained with different tools. Simulator-agnostic model representation languages such as NeuroML and PyNN allow us to preserve the advantages of simulator diversity while reducing or eliminating the disadvantages, thereby making reproducibility and reuse much easier. Such languages let us take a single model description and simulate it in different environments without having to reimplement the model each time. The aim of this project is to expand the scope of PyNN from networks of simplified neuron models, such as integrate-and-fire, to networks consisting of biophysically- and morphologically-detailed neuron models, targeting the NEURON and Arbor simulators, the SpiNNaker and BrainScaleS neuromorphic computing systems, and interoperability with NeuroML and the SONATA format. We offer a flexible and collaborative working environment, including remote working up to two days per week. For more details and to apply, see https://emploi.cnrs.fr/Offres/CDD/UMR9197-ANDDAV-007/Default.aspx?lang=EN Informal enquiries are welcome, contact andrew.davison(a)cnrs.fr Andrew Davison, PhD Group leader, Neuroinformatics Department for Integrative and Computational Neuroscience (ICN) NeuroPSI - Paris-Saclay Institute of Neuroscience CNRS - Université Paris-Saclay 1, avenue de la Terrasse 91198 Gif-sur-Yvette France Tel: +33 1 69 82 34 51 Twitter: @apdavison https://neuropsi.cnrs.fr/en/departments/icn/group-leader-andrew-davison/

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Tutorial on "Understanding early visual receptive fields from efficient coding principles"
by Zhaoping Li June 23, 2021

June 23, 2021

Understanding principles of efficient coding can enable you to answer questions such as: why should the input contrast response function of a neuron take its particular form? Why do retinal ganglion cells have center-surround receptive fields? How correlated or uncorrelated should the visual responses from different retinal ganglion cells be? Why do receptive fields of retinal ganglion cells increase their sizes in dim light? How could visual coding depend on animal species? Why are color selective V1 neurons less sensitive to visual motion signals? How can one predict the ocular dominance properties of V1 neurons from developmental conditions? How should neurons adapt to changes in visual environment? This tutorial guides you on how to answer such questions. It contains: (1) A list of 45 short video lecture clips (about 10 minutes each on average) on YouTube, see http://www.lizhaoping.org/zhaoping/EfficientVisualCoding_Playlist.html (2) In addition to (1), you can join CNS *2021 (see https://www.cnsorg.org/cns-2021-tutorials#T3 ), which enables social interactions with the lecturer and other students via Discord, and on July 3rd (the tutorial day) for highlights, Q&As, and discussions. best, Li Zhaoping -- Li Zhaoping Ph.D. Prof. of Cognitive Science, University of Tuebingen Head of Dept of Sensory and Sensorimotor Systems, Max Planck Institute of Biological Cybernetics Author of "Understanding vision: theory, models, and data", Oxford University Press, 2014 www.lizhaoping.org

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CNS*2021 Workshop: Computational approaches for studying astrocyte dynamics and astrocyte-neuron communication (July 6-7, Online)
by Marsa Taheri June 23, 2021

June 23, 2021

Dear all, We are pleased to announce a workshop on “*Computational approaches for studying astrocyte dynamics and astrocyte-neuron communication*” at this year’s Annual Computational Neuroscience Meeting (CNS*2021). This workshop will run over 2 half-days: July 6-7 (9 am – 12:30 pm UTC-7). ------------------- *Brief Description*: Exciting experimental studies in the last decade have led to an entirely new body of work on the participation of astrocytes in normal and pathological brain function. However, the development of a solid theoretical framework to support and quantify some of the pathways has been somewhat limited, first, due to the lack of intensive collaboration between experimentalists and theorists, and second, due to a persistent neurocentrist view of brain function. Please join us to hear from an incredible lineup of speakers, bringing together specialists, theorists, and experimentalists in the field of astrocyte-neuron signaling: Yukiko Goda, Riken, Japan Alla Borisyuk, University of Utah, USA Jennifer Shih, MIT, USA Annalisa Scimemi, University of Albany, USA Guoqiang Yu, Virginia Tech, USA Laszlo Heja, Hungarian Academy of Sciences, Hungary Anup Pillai, University of Ottawa, Canada Renaud Jolivet, Université de Genève, Switzerland Max Collard, UCSF, USA Audrey Denizot, Okinawa Institute of Science and Technology, Japan Ron Refaeli, The Hebrew University, Israel Kerstin Lenk, Graz University of Technology, Austria ------------------- More information on the workshop at: https://astrocytenet.org/cns2021-online-workshop/ Register and gain access to all CNS*2021 presentations, tutorials, and workshops at: https://www.cnsorg.org/cns-2021 We look forward to your participation! *On behalf of the workshop organizers:* *Kerstin Lenk*, Institute for Neural Engineering, Graz University of Technology, Graz, Austria *Audrey Denizot*, Okinawa Institute of Science and Technology, Computational Neuroscience Unit, Onna-Son, Japan *Barbara Genocchi*, Faculty of Medicine and Health Technology, BioMediTech, Tampere University, Tampere, Finland *Suhita Nadkarni*, Indian Institute of Science Education and Research Pune (IISER Pune), Pune, India *Marsa Taheri*, Department of Neurobiology, University of California Los Angeles, CA, USA Contact information: cns2021.astro.workshop(a)gmail.com

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Software WG satellite tutorials at CNS*2021 on Bash, Git, and Python: June 28, 29 2021
by Ankur Sinha June 23, 2021

June 23, 2021

Dear all, Apologies for the cross-posts. The INCF/OCNS Software Working Group is running three beginner/intermediate level satellite tutorials on Bash, Git, and Python at CNS*2021. These tutorials are on Monday and Tuesday (28/29 June). They are intended for both complete beginners and occasional/regular users who are looking to expand and refresh their skills. More information on these, including topics that we will cover can be seen on our website: https://ocns.github.io/SoftwareWG/2021/06/09/software-wg-tutorials-at-cns-2… - Effective use of Bash (Felix B. Kern): 28 June, 2021 1200 UTC - Effective use of Git (Ankur Sinha): June 28, 2021 1700 UTC - Python for beginners (Joe Graham, Shailesh Appukuttan, Ankur Sinha): 29 June, 2021 1300 UTC One can register for CNS*2021 here to gain access to excellent set of tutorials/workshops/posters and oral presentations that are being organised this year: https://www.cnsorg.org/cns-2021 More information on the Software working group, our work, how you can contact us, and how you can join us (it is open to all) is here: https://ocns.github.io/SoftwareWG/index.html On behalf of the Software WG, -- Thanks, Regards, Ankur Sinha (He / Him / His) Research Fellow at the Silver Lab | http://silverlab.org/ Department of Neuroscience, Physiology, & Pharmacology University College London, London, UK Time zone: Europe/London

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Post-doc position on machine learning and human motion/physiological data analysis at AIST, Japan
by 平山淳一郎 June 23, 2021

June 23, 2021

Dear colleagues, We invite applications for a postdoctoral researcher position on machine learning and human motion/physiological data analysis, available at Mathematical Neuroscience Research Group, Human Informatics and Interaction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST) (https://www.aist.go.jp/index_en.html) Japan. The successful candidate will join a collaborative project with ATR, Kyoto University and Hokkaido University on human-AI co-evolution, funded by NEDO (https://www.nedo.go.jp/english/) and conduct research on machine learning modeling and analysis of human motion data and/or related physiological signals from the brain and body, depending on his/her interests. The starting date is negotiable, with a preference for candidates who can start early. The initial appointment will be until March 2022, with the possibility of extension until March 31, 2025. Salary for the postdoctoral fellow will follow the AIST guideline. To apply, please visit https://jrecin.jst.go.jp/seek/SeekJorDetail?fn=3&ln=1&id=D121020014&ln_jor=1 and send the required application documents to junichiro.hirayama(a)aist.go.jp. The deadline of application is August 31, 2021. The deadline may be extended until the position is filled. -- Jun-ichiro Hirayama Senior Researcher Human Informatics and Interaction Research Institute National Institute of Advanced Industrial Science and Technology (AIST) junichiro.hirayama(a)aist.go.jp https://staff.aist.go.jp/junichiro.hirayama

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Postdoctoral positions in the Geffen lab at the University of Pennsylvania
by Maria Geffen June 22, 2021

June 22, 2021

The Geffen laboratory <http://hosting.med.upenn.edu/hearing> at the University of Pennsylvania <http://www.upenn.edu/> has multiple postdoctoral positions open in systems neuroscience with the broad goal of understanding the neuronal circuits for auditory perception and learning. We are looking for energetic and talented scientists interested in studying the function of the brain. The postdoctoral fellow will have the opportunity to learn and apply a host of systems neuroscience techniques, including two-photon imaging of population activity, optogenetic manipulations, large-scale electrophysiology and behavior in mice. Prior experience with some of these methods is preferred, but not required. Depending on the candidate’s interests, all projects provide an opportunity to learn and apply advanced computational methods, including dynamic systems analysis of neuronal population activity; Bayesian approaches for understanding the relation between neuronal activity and behavior; machine learning methods to understand large-scale neuronal activity. We currently have openings for postdoctoral fellows for three projects: (1) Neuronal mechanisms for predictive coding: Auditory perception relies on predicting statistics of incoming signals, be it identifying the speech of a conversation partner in a crowded room or recognizing the sound of a babbling brook in a forest. The human brain detects statistical regularities in sounds as a fundamental aspect of prediction, evidenced by reduced responses to repeated sound patterns and enhanced responses to unexpected sounds. Multiple studies demonstrate that the neuronal responses to regular signals are reduced through adaptation, which can contribute to prediction. However, adaptation alone is not sufficient to account for prediction and studies at cellular and neuronal population levels in animals thus far lend only partial support to existing theories of predictive coding. The goal of the project is to close this gap in knowledge and to determine the circuits that predict signals and detect statistical regularity and its violation in auditory behavior. Funded by NIH NIDCD. (2) Neuronal circuits for learning-driven changes in auditory perception: Everyday auditory behavior depends critically on learning-driven changes in auditory perception that rely on neuronal plasticity within the auditory pathway. By combining state-of-the-art optogenetic, electrophysiological, behavioral and computational approaches, the project seeks to identify the function of specific circuit elements in auditory learning. Funded by NIH NIDCD. (3) Neuronal mechanisms for hearing under uncertainty: In everyday life, because both sensory signals and neuronal responses are noisy, important cognitive tasks, such as auditory categorization, are based on uncertain information. To overcome this limitation, listeners incorporate other types of signals, such as the statistics of sounds over short and long time scales and signals from other sensory modalities into their categorization decision processes. This project will identify the contribution of specific cell types to categorization and the neuronal mechanisms for how contextual signals bias auditory categorization. In collaboration with Dr. Yale Cohen <https://auditoryresearchlaboratory.weebly.com/> and Dr. Konrad Kording <http://kordinglab.com/>, funded by NIH BRAIN Initiative. Our laboratory is a close community of fun-loving scientists, striving to help each other while exploring the mysteries of the brain. Our trainees have won numerous awards and have been awarded government and private foundation grants. We value diversity and promote equity in the scientific community and beyond <https://hosting.med.upenn.edu/hearing/philosophy/>. The systems neuroscience community at the University of Pennsylvania is top-notch and highly collaborative, and postdoctoral fellows will have opportunities to engage in interdepartmental initiatives, including MindCore <https://mindcore.sas.upenn.edu/>, MINS <https://www.med.upenn.edu/ins/> and CNI <https://www.cni.upenn.edu/>. Penn has a gorgeous campus and offers many cultural activities. Philadelphia is a beautiful city with world-class music, food and entertainment. To apply, please email Dr. Geffen at mgeffen(a)pennmedicine.upenn.edu <mailto:mgeffen@pennmedicine.upenn.edu> : a cover letter (summarize your prior research experience, why you are interested in the position, and your future plans) and your CV. __________________________ Maria N. Geffen, Ph.D. (she/her) Associate Professor Department of Otorhinolaryngology Department of Neuroscience Department of Neurology Stemmler Hall G14 3450 Hamilton Walk Philadelphia PA 19104 (215)898-0782 mgeffen(a)pennmedicine.upenn.edu http://hosting.med.upenn.edu/hearing Twitter: @neimarkgeffen

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Three Assistant Professor Positions at University of Sussex
by Thomas Nowotny June 22, 2021

June 22, 2021

Dear all, The School of Engineering and Informatics at the University of Sussex is seeking to hire three Assistant Professors (“Lecturers”, permanent position) in Computer Science and AI. One of the positions is particularly focused on a researcher with interests in one or more of the following areas: machine learning, ethical AI, computational Neuroscience, complexity science, consciousness science and bio-inspired AI and robotic control. They should be able to teach general subjects in Computer Science and Artificial Intelligence at Undergraduate and Taught Postgraduate levels. They will work within the Artificial Intelligence Research Group, including opportunities to interact with the robotics group in the Department of Engineering. The AI Research Group at the University of Sussex was created through the merger of the Evolutionary and Adaptive Systems (EASy) and the Data Science groups. We conduct research and teach a wide range of AI related topics, often cross-disciplinary and with a unique Sussex angle. We collaborate internationally and locally with academics, businesses, and public stakeholders, working at the frontiers of knowledge, on solving real-world problems, and in policy and public outreach. Applications should be accompanied by a full CV, and statements of future research plans and ways in which the applicant could contribute to teaching across the School. Please contact Dr Ian Mackie I.Mackie(a)sussex.ac.uk<mailto:I.Mackie@sussex.ac.uk> , Head of the Department of Informatics, for informal enquiries. The full job advert is posted at https://t.co/K0CdIYx6xH?amp=1 including a detailed person specification and details how to apply. Please get in touch if you are interested in these positions and forward to any interested colleagues. Kind regards, Thomas -- Prof Thomas Nowotny Head of the AI Research Group Director of Research and Knowledge Exchange School of Engineering and Informatics University of Sussex Falmer, Brighton BN1 9QJ, UK Phone: +44-1273-678593 FAX: +44-1273-877873

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Post-doc / research associate position in neural reinforcement learning using causal models (Sheffield, UK, 33 months, deadline 4th July)
by Aditya Gilra June 22, 2021

June 22, 2021

Dear All, We're looking for a post-doc / research associate to work on bio-plausible neural networks that learn causal models of the environment and utilize these to plan and explain actions in reinforcement learning. The position is for 33 months at the University of Sheffield, UK. Read more at: https://www.chistera.eu/projects/causalxrl . Apply via (deadline: 4th July): https://jobs.shef.ac.uk/sap/bc/webdynpro/sap/hrrcf_a_posting_apply?PARAM=cG… Best, Aditya. -- Aditya Gilra, Lecturer (Assistant Professor), Machine Learning Group <https://www.sheffield.ac.uk/dcs/research/groups/machine-learning> & Neuroscience Institute <https://www.sheffield.ac.uk/neuroscience-institute/research/computational-a…> , Department of Computer Science, University of Sheffield, UK. https://www.sheffield.ac.uk/dcs/people/academic/aditya-gilra

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WWNeuRise series on neuromodulation & applications/recommendations
by William Podlaski June 21, 2021

June 21, 2021

WorldWideNeuRise will host several online talks throughout June-July on the topic of neuromodulation in the brain from the following speakers: Wednesday, 30 June, 5pm CET Lindsay Collins (McCormick Lab, University of Oregon, USA) Cristina Colangelo (Blue Brain Project, EPFL, Switzerland) Wednesday, 14 July, 5pm CET Jasmine Pickford (Apps Lab, University of Bristol, UK) Luke Coddington (Dudman Lab, Janelia Research Campus, USA) Wednesday, 28 July, 5pm CET Rohan Sharma (Suhita Lab, IISER Pune, India) Ines Guerreiro (Gutkin Lab, Ecole Normale Superieure, France) For more information, please visit our website (https://neurise.github.io/) find us on WorldWideNeuro (https://www.world-wide.org/Neuro/WWNeuRise/) or follow us on Twitter (https://twitter.com/WWNeuRise) We are actively searching for PhD students and postdocs to give talks in our upcoming seminar blocks. On our website (https://neurise.github.io/) you can find an application form to directly apply, as well as a recommendation form, where you can suggest individuals from your lab, institute, or otherwise who you think might have an interesting story to tell! We are looking forward to seeing you at our upcoming seminars! The organising committee, Ellen Boven (Apps lab, University of Bristol) Christina Buetfering (Häusser lab, University College London) Lucie Descamps (Kentros lab, Norwegian University of Science and Technology) Gily Ginosar (Ulanovsky lab, Weizmann Institute) Loreen Hertäg (Clopath lab, Imperial College London) Joram Keijser (Sprekeler lab, TU Berlin) Bill Podlaski (Machens lab, Champalimaud Research)

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NeuroML hands-on satellite tutorial at CNS*2021 on July 2nd 2021 at 1500 UTC
by Ankur Sinha June 21, 2021

June 21, 2021

Dear all, Apologies for the cross-posts. We will be running a half day satellite tutorial at the 30th annual meeting of the Organization for Computational Neurosciences (OCNS), CNS*2021 Online. The tutorial will be held on July 2nd, 2021 at 1500 UTC. https://docs.neuroml.org/Events/202107-CNS2021.html The goal of the tutorial is to teach users to build, visualise, analyse, and simulate models using NeuroML. Why take part? --------------- This tutorial is aimed at new and current NeuroML users. We will start with a quick introduction to the NeuroML standard and the associated software ecosystem, after which we will proceed to conduct hands-on sessions to show how one can build computational models with NeuroML. Times and dates ---------------- - Friday 2nd July 1500 UTC Click here for your local time: https://www.timeanddate.com/worldclock/fixedtime.html?msg=NeuroML+tutorial+… Registration ------------- To take part in the tutorial, please register here for the CNS*2021 meeting: https://www.cnsorg.org/cns-2021 Pre-requisites --------------- The sessions will make use of the NeuroML Python tools. Please follow the documentation to install them on your system if you wish to use them locally: - PyNeuroML: https://docs.neuroml.org/Userdocs/Software/pyNeuroML.html#pyneuroml - libNeuroML: https://docs.neuroml.org/Userdocs/Software/libNeuroML.html#libneuroml You can also use the interactive Jupyter notebooks from the documentation if you prefer (example: https://docs.neuroml.org/Userdocs/NML2_examples/SingleNeuron.html) These can be run on Binder and Google Collab in your web browser and do not require you to install anything locally on your computer. Slack ----- To aid communication with the community during (and after) the meeting, we have a Slack channel for NeuroML related discussions. Please contact Padraig Gleeson (p DOT gleeson AT ucl DOT ac DOT uk) or Ankur Sinha (ankur DOT sinha AT ucl DOT ac DOT uk) for an invite. You can also contact the NeuroML community using one of our other channels: https://docs.neuroml.org/NeuroMLOrg/CommunicationChannels.html#contact-chat We look forward to working with the community to drive further uptake of NeuroML compliant models and tools! -- Thanks, Regards, Ankur Sinha (He / Him / His) Research Fellow at the Silver Lab | http://silverlab.org/ Department of Neuroscience, Physiology, & Pharmacology University College London, London, UK Time zone: Europe/London

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Q&A about INCF activities and membership
by Helena Ledmyr June 21, 2021

June 21, 2021

Hello! Are you an open neuroscience practitioner or want to become one? Do you want to have input on global strategies for data sharing in neuroscience? Join the INCF network! INCF directors Helena Ledmyr and Mathew Birdsall Abrams will answer all your questions about INCF participation in our webinar on June 29th at 10am EDT / 4pm CEST, where long-time community member Samir Das (McGill U) will reflect on how he has benefited from membership. Register at bit.ly/INCFwebinar Information about INCF and memberships can be found on our website <https://www.incf.org/>. All the best, Helena Ledmyr ----------------------------- Helena Ledmyr, PhD *Director* *Development and Communications* International Neuroinformatics Coordinating Facility Secretariat Karolinska Institutet. Nobels väg 15A, SE-171 77 Stockholm. Sweden Email: helena.ledmyr(a)incf.org Phone: +46 8 524 870 35 incf.org neuroinformatics.incf.org

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Assistant professor position in Göttingen, Germany
by Ecker, Alexander June 21, 2021

June 21, 2021

We have an opening for an assistant professor position for ML/CV for biomedical applications in the computer science department at the University of Göttingen, Germany. Application deadline it July 11. For details see below or at https://www.uni-goettingen.de/en/645470.html The Faculty of Mathematics and Computer Science at the Georg-August-University of Goettingen invites applications for a Sartorius AG Endowed Junior Professorship W1 – „Computational Cell Analytics“ (all genders welcome) The junior professorship will be part of the "CIDAS-Sartorius lab for AI-based high-throughput analysis of cell systems" and will actively contribute to its further development. In the CIDAS-Sartorius Lab, we will develop novel data analysis methods to obtain scientific insights from observations of cell systems in various areas of the life sciences. It is a collaboration between the Campus Institute Data Science (CIDAS), the Institute for Computer Science, the University Medical Center Goettingen and Sartorius AG. The junior professorship will also be part of the Campus Institute Data Science (CIDAS) and contribute to its development. CIDAS is a central institution of the University of Goettingen and works closely with the partners of the Goettingen Campus such as the University Medical Center, several Max Planck Institutes, the German Primate Center, the Academy of Sciences and the German Aerospace Center Goettingen. The junior professorship is thus optimally integrated into Goettingen's top-notch life science research environment. The future holder of the position should have expertise in computer science with a focus on machine learning/deep learning and/or computer vision. The professorship contributes to the development of new analytical methods and their application in the field of cell analysis. Possible research foci are among others: - Computer vision in biomedical imaging - Biomedical image processing - Image based cell and biomolecular analytics - Methods for object recognition and image segmentation - Large-scale machine learning & deep learning - Nonlinear and dynamic prognosis models for the description and prediction of complex, nonlinear processes in cell models The candidate should have a track record of internationally competitive high-quality research and a high potential for groundbreaking research in internationally visible projects. The candidate is expected to contribute to teaching in the data science programs. Goettingen University is committed to research-oriented teaching. Applications of international scientists are highly encouraged. The University is an equal opportunity and family friendly employer. We specifically encourage women to apply. Disabled persons with appropriate qualifications and aptitude for the position will be given special consideration. Applications including CV, publications list and details of teaching and research including funded research projects should be submitted by 11 July 2021 online via the application portal: https://tinyurl.com/44r336yn For further information please contact Prof. Dr. Alexander Ecker, Institute of Computer Science and Campus Institute Data Science: ecker(a)cs.uni-goettingen.de. -- Alexander Ecker Professor of Data Science Department of Computer Science • Campus Institute Data Science University of Göttingen • Max Planck Inst. for Dynamics and Self-Organization Goldschmidtstr. 1 • room 2.137 • 37077 Göttingen https://eckerlab.org • @alxecker • +49 551 39-21272

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PhD Studentship in Improving medication verification for cancer patients
by Shangming Zhou June 20, 2021

June 20, 2021

Dear All, *PhD Studentship in Improving medication verification for cancer patients: An AI driven population health study* Applications are invited for a three-year PhD studentship. The studentship will start on* 1 October, 2021, *or as soon as possible after that. *Overview of the Studentship* This fully funded PhD studentship is based at the University of Plymouth’s Centre for Health Technology <https://eur03.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.plymo…>, a leading international research group focused on the design, development and implementation of health technology innovations in health and care. This vibrant team of researchers work within the intersection of digital health, software engineering, data science, clinical artificial intelligence, and innovation strategy, with a primary aim to create a global hub for technology incubation in the South West of the United Kingdom. *Project Description* Medication errors, including those in prescribing, dispensing, or administration of a drug, are the single most preventable cause of patient harm. They have a significant impact on the efficiency of the workflow in pharmacy, raise safety concerns for patients, and result in a financial burden on the healthcare systems. Within cancer treatment, emphasis on reducing the number of medication errors has been an active research area for many years, with understanding that interdisciplinary approaches are vital to assure continuous improvement. Opportunities created by the reduction of transaction times for complex computational processes and use of machine learning to support clinical decision making, create a potential catalyst for the development of tools for reduction in medication errors. This PhD studentship offers an exciting opportunity of exploring AI and machine learning with large clinical data sets residing within electronic health records to create methods to assure the effective use of systemic anticancer treatment (including traditional cytotoxic chemotherapy, immunotherapy, novel oral therapies etc.) without compromising patient safety. The studentship will require application of interdisciplinary skills to enable cooperation between the research, clinical, industry and patient communities in the development of a novel approach which could enhance clinical outcomes. *Supervision Team* - Professor Shang-Ming Zhou <https://eur03.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.plymo…> (shangming.zhou(a)plymouth.ac.uk) https://scholar.google.com/citations?user=iWiXGWMAAAAJ&hl <https://eur03.safelinks.protection.outlook.com/?url=https%3A%2F%2Fscholar.g…> - Dr Edward Meinert (edward.meinert(a)plymouth.ac.uk) https://scholar.google.com/citations?hl=en&user=7V-WsrwAAAAJ <https://eur03.safelinks.protection.outlook.com/?url=https%3A%2F%2Fscholar.g…> - Mrs Andrea Preston (Andrea.Preston(a)uhbw.nhs.uk) This PhD student will be academically advised by Professor Shang-Ming Zhou and Dr Edward Meinert, research scientists with research interests in applied artificial intelligence and machine learning, computing science in health and care. The student will also be advised by Mrs Andrea Preston, a Macmillan Divisional Lead Haematology & SW Cancer Commissioning Pharmacist. This supervision team will assure the execution of a world-class PhD embedded into the wider digital health ecosystem at the University of Plymouth. *Eligibility* · This PhD studentship is offered for UK and international applicants. · Applicants should have: 1) A first or upper second-class honours degree, and a relevant Master’s qualification in Computing Science, Data Science, Statistics, Health Informatics, Medical Informatics, Bioinformatics, or any areas related; 2) Interest in working with real-world problems and large data sets; 3) Excellent proficiency in English and outstanding communication skills; 4) Strong analytical and programming skills; 5) A “can do”, positive attitude with an aspiration to change the world. · Experience in machine learning is advantageous. · Experience in publication of peer-reviewed literature is desirable. *International Students* International applicants should meet the English language requirements, please see the details from the University’s website https://www.plymouth.ac.uk/international/how-to-apply/english-language-requ… <https://eur03.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.plymo…>. IELTS Academic 6.5 or above (or equivalent) with 5.5 in each individual category is commonly required by the University’s Doctoral College. *How to Apply* *To apply for this position,* please visit: https://www.plymouth.ac.uk/student-life/your-studies/research-degrees/postg… <https://eur03.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.plymo…>. *Please clearly state the name of the studentship that you are applying for on your Personal Statement.* A research proposal is required. Please see: https://www.plymouth.ac.uk/student-life/your-studies/research-degrees/appli… <https://eur03.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.plymo…> for a list of supporting documents to upload with your application. *Enquiry * If you wish to discuss this project further informally, please contact Professor Shang-Ming Zhou (shangming.zhou(a)plymouth.ac.uk) Dr Edward Meinert (edward.meinert(a)plymouth.ac.uk) or Mrs Andrea Preston ( Andrea.Preston(a)uhbw.nhs.uk) For more information on the admissions process, please contact doctoralcollege(a)plymouth.ac.uk. *Closing Date* *The closing date for applications is 30 July 2021. *Shortlisted candidates will be invited for interview. Best wishes Shangming Zhou _______________________________________________________ Shang-Ming Zhou Professor in e-Health, Fellow of the Higher Education Academy, Centre for Health Technology, Faculty of Health, University of Plymouth, Plymouth, PL4 8AA, UK Tel: +44 (0)1752 586513 Email: shangming.zhou(a)plymouth.ac.uk ; smzhou(a)ieee.org https://www.plymouth.ac.uk/staff/shang-ming-zhou <https://eur03.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.plymo…> https://www.hdruk.ac.uk/people/dr-shang-ming-zhou <https://eur03.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.hdruk…> https://www.plymouth.ac.uk/research/centre-for-health-technology <https://eur03.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.plymo…>

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BrainCosmos Summer School on Neural Circuit Complexity from Aug 30-Sep 3
by Shyam Diwakar June 19, 2021

June 19, 2021

Dear Fellow Neuroscientists and Students, We would like to welcome you to a BrainCosmos Summer School titled "Neural circuit complexity: Neuroscience, Models and Robotics - Where do they lead?" organized at Lake Como, Italy from August 30-September 3, 2021. For more info: https://brco.lakecomoschool.org/ <https://brco.lakecomoschool.org/> The BrainCosmos summer school focuses on the study of the brain, neuroscience of circuits and behavior in micro and macro scales, models, experiments, alongside topics of robotics and artificial intelligence and a perspective on brain diseases. The school primarily targets PhD students across all research disciplines, but applications from professionals, masters students and post-doctoral researchers are welcome as well. The School will also cater to early career researchers in Neuroscience and will aim to promote critical thinking within the field and beyond. The scope covers a very wide range of topics that we believe to be of interest to many fields related to neuroscience, modeling, robotics and artificial intelligence. PARTICIPATION: The school will run in parallel with two simultaneous batches, one in presence (20 participants) and another remotely (20 participants). The lectures will be streamed. APPLY: https://brco.lakecomoschool.org/application/ FEES: There are some nominal fees for participation. In presence attendance: € 120, 22% VAT included (including lunches, coffee breaks, and all lectures and school materials). Online attendance: €100, 22% VAT included (including the possibility to participate remotely to all the lectures given during the school and to the related initiatives, and to have access to the recordings of the lessons from the school portal for a period of three months after the end of the school. KEY DATES Application deadline: July 20 Acceptance notification: July 23 Registration (only accepted students): August 3 Confirmed FACULTY list: Anna Letizia Allegra Mascaro - LENS, Florence, Italy Alberto Antonietti - EPFL, Swiss Silvia Casarotto – University of Milan, Italy Claudia Casellato - University of Pavia, Italy Marco Dal Maschio – University of Padoa, Italy Egidio D'Angelo - University of Pavia, Italy Damien Depannemaecker - CNRS, Paris, France Shyam Diwakar - Amrita Mind Brain Center, Amrita University, India Kenji Doya – Okinawa Institute of Science and Technology Graduate University, Japan Claudia Gandini Wheeler-Kingshott - University College London, UK & University of Pavia, Italy Alice Geminiani - University of Pavia, Italy Michele Giugliano – SISSA, Trieste, Italy Alberto Mazzoni - Scuola Superiore Sant’Anna Pisa, Italy Michele Migliore - CNR Palermo, Italy Fulvia Palesi – BCC Pavia, Italy Alessandra Laura Giulia Pedrocchi - Politecnico Milano, Italy Michele Piana - University of Genoa, Italy Isabella Pozzi - CWI, Amsterdam Holland Simone Sarasso – University of Milan, Italy The School DIRECTORS: Giovanni Naldi - University of Milan, Department of Environmental Science and Policy, Italy. giovanni.naldi(a)unimi.it<mailto:giovanni.naldi@unimi.it> Thierry Nieus - University of Milan, Italy. thierry.nieus(a)unimi.it<mailto:thierry.nieus@unimi.it> Simone Sarasso - University of Milan, Department of Biomedical and Clinical Sciences “Luigi Sacco”, Italy. simone.sarasso(a)unimi.it<mailto:simone.sarasso@unimi.it> Shyam Diwakar - Amrita Mind Brain Center, Amrita University, India. shyam(a)amrita.edu<mailto:shyam@amrita.edu> Please feel free to circulate! With best wishes, -- Prof. Shyam Diwakar, Ph.D. Director - Amrita Mind Brain Center Faculty Fellow - Amrita Center for International Programs Amrita Vishwa Vidyapeetham (Amrita University) Amritapuri, Clappana P.O. Kollam, India. Pin: 690525 Ph:+91-476-2803116 Fax:+91-476-2899722 http://amrita.edu/mindbrain [https://docs.google.com/uc?export=download&id=1_nOxaCXob6wVcuQyYI5KVk1PhMgi…] [https://intranet.cb.amrita.edu/sig/RankingLogo.png] Disclaimer : The information transmitted in this email, including attachments, is intended only for the person(s) or entity to which it is addressed and may contain confidential and/or privileged material. Any review, retransmission, dissemination or other use of, or taking of any action in reliance upon this information by persons or entities other than the intended recipient is prohibited. Any views expressed in any message are those of the individual sender and may not necessarily reflect the views of Amrita Vishwa Vidyapeetham. If you received this in error, please contact the sender and destroy any copies of this information.

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Job: Editor with Nature Machine Intelligence (9 month locum position - London, NY, Berlin)
by Yann Sweeney June 18, 2021

June 18, 2021

Dear all, Nature Machine Intelligence are looking to recruit a locum editor. We are a new Nature Research journal that launched in 2019. It publishes both fundamental and applied research in a wide range of areas in artificial intelligence and robotics. The journal incorporates elements of computer science, electrical engineering, mathematics, physics, neuroscience, cognitive science and psychology. The journal also publishes news, commentary and perspectives on the impact of machine intelligence on science and society. We are inviting applications from those with a background in any of the above and related fields. Applicants should have completed a PhD, have a strong research record, feel driven to continually learn about new fields and trends and have a keen interest in exploring the wide implications of research on other scientific areas, industry and society. We would be interested in hearing from candidates who can demonstrate strong science writing skills. Editorial experience is not required, although applicants with significant editorial experience are encouraged to apply and will potentially be considered for a Senior Editor position. The successful candidate will report to the Chief Editor. They will participate in all aspects of the editorial process, including manuscript selection, commissioning and editing News and Views, Comments, Perspectives and Reviews, as well as writing for the journal. The successful candidate must be dynamic and outgoing, and have excellent communication and interpersonal skills. A key aspect of the job is liaising with the research community through laboratory visits and international conferences, and therefore a willingness to travel is essential. The position is offered on a full-time basis, for an initial fixed term of 9 months, and will ideally be located in our London, Berlin or New York office. The starting date is envisaged as soon as possible within the next few weeks. Full advert here, apply by 22 June: https://career5.successfactors.eu/sfcareer/jobreqcareer?jobId=33925&company… Feel free to email with informal inquiries. All the best, Yann Senior Editor Nature Machine Intelligence yann.sweeney(a)nature.com

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Postdoc opportunity at Stanford Cognitive and Systems Neuroscience Laboratory
by Mai-Phuong K Bo June 18, 2021

June 18, 2021

The Stanford Cognitive and Systems Neuroscience Laboratory (scsnl.stanford.edu<https://med.stanford.edu/scsnl.html>) invites applications for post-doctoral positions with expertise in cognitive, systems and computational neuroscience. Candidates must have a PhD and research experience in cognitive neuroscience, psychology, cognitive science, computer science, electrical/biomedical engineering, or related fields. The successful candidate will develop a vigorous research program that contributes to, and complements, ongoing research studies of human brain function and psychopathology. The candidate will have access to multiple large datasets and state-of-the-art computational resources, including HPCs and GPUs. We are especially interested in talented and highly motivated individuals with expertise in at least one of these areas: cognitive neuroscience; computational psychiatry; cognitive modeling of behavioral dynamics; computational and statistical analysis of brain imaging and electrophysiological data, including dynamic brain circuit analysis, statistical modeling and Bayesian inference, machine learning, and deep neural networks. Please email your CV and a statement of research interests, explaining how your skills and past experience will advance human neuroscience research, to Prof. Menon at scsnl.stanford+postdoc(a)gmail.com<mailto:scsnl.stanford+postdoc@gmail.com>. Mai-Phuong Bo (She/Her) Lab & Recruitment Manager Stanford Cognitive & Systems Neuroscience Lab Department of Psychiatry & Behavioral Sciences Email: maipbo(a)stanford.edu [cid:461d2e43-3a74-4692-8e70-e709a54c2c86]

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Postdoc position at Inria Sophia Antipolis
by Etienne Tanré June 17, 2021

June 17, 2021

Dear colleagues, Apologies for Cross-Posting, This is an announcement for a 24 months post-doctoral position at Inria Sophia Antipolis on the theme ``Heterogeneity in interacting neural networks'’. The candidate will be supervised by E. Tanré, R. Veltz and O.Faugeras. This project is part of the Human Brain Project HBP SGA3. More information is available on : https://jobs.inria.fr/public/classic/en/offres/2021-03818 <https://jobs.inria.fr/public/classic/en/offres/2021-03818> Please note that you must apply for the position using the link above. Can you please forward this announcement to your interested contacts? Thank you, Best regards, E. Tanré, R. Veltz and O. Faugeras.

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Opening: Postdoctoral Researcher in Computational Neuroscience to study network dynamics, brain function, and psychedelics
by Joern Davidsen June 16, 2021

June 16, 2021

Dear all: We are recruiting a talented postdoctoral researcher to participate in a cutting-edge International Network for Brain-Inspired Computation<https://www.nsf.gov/awardsearch/showAward?AWD_ID=2019976&HistoricalAwards=f…> that includes nodes in Montreal, Paris, and the Pacific Northwest of the US and Canada (e.g. University of Washington, Allen Brain Institute). The project is at the intersection of mathematics, physics, and neuroscience in the general area of complex network dynamics and emergent activity patterns and representations that drive biological computation. The specific objective is to understand cognitive brain function and the effects of psychedelics by analyzing large-scale ensemble neural data collected in our labs, in conjunction with computational and/or analytical work to identify key mathematical principles and develop theories of core function. The ideal candidate will have a quantitative background (e.g. PhD in mathematics, physics, computer science) along with experience in applying this background to neuroscience. This postdoctoral position is partially funded by the Pacific Institute for Mathematical Sciences<https://www.pims.math.ca/> and is aimed to strengthen the link between the Campus Alberta computational neuroscience community at the University of Calgary (Complexity Science Group<https://www.ucalgary.ca/complexity/>, Hotchkiss Brain Institute<https://hbi.ucalgary.ca/>) and the University of Lethbridge (Canadian Center for Behavioural Neuroscience<https://www.uleth.ca/artsci/neuroscience/about>) with the other network members including the Computational Neuroscience Center<https://cneuro-web01.s.uw.edu/> at the University of Washington. The position is open immediately with primary locations in either Calgary or Lethbridge. The specific start date has to be within five years of being awarded a PhD degree. The position is funded for at least two years and includes an annual stipend in the range of CAD$42,000 – $50,000 plus benefits. Opportunities for brief residences in partner nodes (Montreal, Seattle, or Paris) are also available. Interested candidates should submit their application package including a cover letter, their CV with a list of publications, brief statement of research interests and their possible start dates in PDF format to Dr. Jörn Davidsen (davidsen(a)phas.ucalgary.ca<mailto:davidsen@phas.ucalgary.ca>) and Dr. Aaron Gruber (aaron.gruber(a)uleth.ca<mailto:aaron.gruber@uleth.ca>). Applicants should arrange for at least two letters of reference to be sent as well. Review of applications will begin July 31st, 2021, and continue until the position is filled. For additional information and informal inquiries, please contact Dr. Davidsen or Dr. Gruber. We strive for a diverse and inclusive environment, and encourage applications from members of any identity. --- Dr. Jörn Davidsen Professor of Physics & Humboldt Research Fellow University of Calgary www.ucalgary.ca/davidsen<http://www.ucalgary.ca/davidsen>

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PostDoc position in Neuroinformatics, Nijmegen, The Netherlands
by Rembrandt Bakker June 16, 2021

June 16, 2021

(apologies for any cross-postings) The FLAG-ERA project NeuronsReunited is looking for a postdoctoral research associate (Neuroinformatics/Computational Neuroscience) for a 2 year position at 0.9 fte. Each mental event or voluntary motor act involves the coordinated activity of neurons in areas of the brain far apart. Thin, branched and extremely long cellular processes called axons provide the physical substrate of these interactions. Since a few years it is possible to fully trace these long- range axons one at a time. The goal of the FlagERA research project "NeuronsReunited" (https://www.flagera.eu/wp-content/uploads/2020/06/FLAG-ERA_JTC2019_HBP_Neur…) is to create tools for speeding up the conversion of experimental data into digital axons, and to precisely place neurons into a digital reference brain to reveal their context. The tools are applied to existing and new data in mouse, and the resulting insights are incorporated into new models for brain function. The project is a collaboration between five international partners, two experimental partners (Prof. Francisco Clasca, Madrid; Prof. Egidio d'Angelo, Pavia) and three computational/theoretical partners (Prof. Paul Tiesinga, Dr. Rembrandt Bakker, Nijmegen; Prof. Michele Giugliano, Trieste; Prof. Sacha Van Albada, Jülich). As a postdoctoral research associate you will design strategies to get axonal arbors precisely registered in a brain atlas. The brain atlas consists of high-resolution 3d dataset that represents the average mouse brain anatomy, while the neuron consists of a vector representation of its morphology that can be extended with images of selected tissue sections. Depending on your field of expertise, further steps can focus on automating the process to trace neurons from stained tissue sections or to integrate the resulting database of precisely registered neurons with other data modalities to generate new knowledge. You will be part of a team that deals with atlasing and data integration (Nijmegen) and model building (Jülich, Padova, Trieste). A key deliverable will be the creation of a gold standard online catalog of precisely placed neurons that future generations of neuroscientists can contribute to and compare data to. The tools make use of an existing body of work that consists of web-based applications: HBP Morphology Viewer (https://neuroinformatics.nl/HBP/morphology-viewer) Scalable Brain Atlas (https://scalablebrainatlas.incf.org/) and interactive notebooks (Python). Besides being a member of the project team, you will also be part of the European Human Brain Project and have access to the expertise of the large neuroscience community at the Donders Institute for Brain, Cognition and Behavior. We ask: • A PhD degree in a quantitative field (engineering, physics, computational neuroscience, etc). • Expertise in neuroscience or interest in acquiring it. • Excellent programming skills, preferably in JavaScript applications or Python-based pipelines. • Experience with neuroinformatics, visualization/3d-graphics, image processing, and/or machine learning. • Demonstrated ability to work in a multidisciplinary environment at the forefront of science. • Excellent communication skills in spoken and written English. We are: The Donders Institute for Brain, Cognition and Behaviour, home to more than 600 researchers from 35 countries, is a world-class research centre devoted to understanding the mechanistic underpinnings of human cognition and behaviour in health and disease. The institute's mission includes conducting excellent interdisciplinary research at the unique interface between genetic, molecular and cellular processes at one end and computational, system-level neuroscience with cognitive and behavioural analysis at the other end. Within this playing field, the Neuroinformatics department plays an essential role in developing new approaches for both computational modeling and data processing, all with the aim to turn raw data into highly valuable and well-integrated resources from which neuro-scientific insights can be extracted. Radboud University We want to get the best out of science, others and ourselves. Why? Because this is what the world around us desperately needs. Leading research and education make an indispensable contribution to a healthy, free world with equal opportunities for all. This is what unites the more than 22,000 students and 5,000 employees at Radboud University. And this requires even more talent, collaboration and lifelong learning. You have a part to play! We offer: • Employment: 0.9 FTE. • A maximum gross monthly salary of € 4,402 based on a 38-hour working week (salary scale 10). • The exact salary depends on the candidate's qualifications and amount of relevant professional experience. • In addition to the salary: an 8% holiday allowance and an 8.3% end-of-year bonus. • Duration of the contract: 25 months. • The intended start date is 1 September 2021. • You will be able to use our Dual Career and Family Care Services. Our Dual Career and Family Care Officer can assist you with family-related support, help your partner or spouse prepare for the local labour market, provide customized support in their search for employment and help your family settle in Nijmegen. • Have a look at our excellent employment conditions. They include a good work-life balance (among other things because of the excellent leave arrangements), opportunities for development and a great pension scheme. Apply directly Please use this link to apply: https://www.ru.nl/english/working-at/vacature/online-solliciteren/?tk=uk&re…. Address your application to Paul Tiesinga and submit it no later than 1 July 2021. Your application should include the following attachments: • Letter of motivation. • CV including contact details of two references. • Your research statement. The first round of interviews will take place on 6th July 2021. The second round of interviews will take place on 13th July 2021. For more information about this vacancy, please contact: Paul Tiesinga, Full Professor Tel.: +31 24 365 22 32 Email: p.tiesinga(a)science.ru.nl<mailto:p.tiesinga@science.ru.nl> Rembrandt Bakker, Postdoctoral Researcher Tel.: +31 24 365 26 33 Email: r.bakker(a)donders.ru.nl<mailto:r.bakker@donders.ru.nl> ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Juelich GmbH 52425 Juelich Sitz der Gesellschaft: Juelich Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Volker Rieke Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender), Karsten Beneke (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt, Dr. Astrid Lambrecht, Prof. Dr. Frauke Melchior ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------

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Postdoctoral position - Pinto Lab @ Northwestern University
by Lucas Pinto June 15, 2021

June 15, 2021

Dear colleagues, The Pinto Lab<http://www.pintolab.org> is seeking a postdoc who is excited about studying how neural circuits across many brain areas interact to support decision making, at the interface between experimental and computational neuroscience. In particular, the lab is interested in understanding the circuit mechanisms the control how these interactions are flexibly reconfigured when animals make decisions that use different underlying computations. To answer these questions, the candidate will use a combination high-throughput behavior in virtual reality, optical and genetic tools to measure and/or manipulate the dynamics of single neurons and neuronal populations, and computational approaches to understand both the behavior and its relationship to neural activity. We are a brand new lab that started in January 2021 at the Feinberg School of Medicine<https://www.feinberg.northwestern.edu/> at Northwestern University<http://www.northwestern.edu>, located in the heart of Chicago. Come join a vibrant neuroscience community<https://www.nuin.northwestern.edu/> in a world-class and highly livable city, working with a young PI committed to mentoring. Please visit our website<http://www.pintolab.org> for more details. Applicants should be nearing completion or already hold a PhD in neuroscience, biology, engineering, computer science, psychology or other related fields. Coding and/or experimental skills are preferred, but the applicant will have the opportunity to be trained in these techniques. We strongly encourage candidates from underrepresented groups to apply. Please send a CV, a one-page statement of research interests and skills, and contact information for 2-3 references to Lucas Pinto at lucas.pinto(a)northwestern.edu<mailto:lucas.pinto@northwestern.edu>. Best, Lucas - - - - - - - - - - - - - - - - - - - - - - - - - - - Lucas Pinto, M.D., Ph.D. Assistant Professor Department of Physiology Feinberg School of Medicine Northwestern University lucas.pinto(a)northwestern.edu<mailto:lucas.pinto@northwestern.edu> www.pintolab.org

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NEST Conference 2021 — Registration Deadline 21 June
by Hans Ekkehard Plesser June 15, 2021

June 15, 2021

Dear all, Just a little reminder that the registration deadline for the NEST Conference 2021 is on Monday next week, June 21. More information on the programme and how to register can be found on the conference website https://nest-simulator.org/conference This year's conference will again take place as a virtual conference on Monday/Tuesday 28/29 June 2021 followed by a virtual NEST User Hackathon until Friday 2 July. The NEST Conference provides an opportunity for the NEST Community to meet, exchange success stories, swap advice, learn about current developments in and around NEST spiking network simulation and its application. We are looking forward to seeing you all! Hans Ekkehard Plesser & many more -- Prof. Dr. Hans Ekkehard Plesser Head, Department of Data Science Faculty of Science and Technology Norwegian University of Life Sciences PO Box 5003, 1432 Aas, Norway Phone +47 6723 1560 Email hans.ekkehard.plesser(a)nmbu.no<mailto:hans.ekkehard.plesser@nmbu.no> Home http://arken.nmbu.no/~plesser

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INCF/OCNS Software WG Dev session on SciUnit/NeuronUnit (June 21, 1600 UTC)
by Ankur Sinha June 14, 2021

June 14, 2021

Dear all, Apologies for the cross posts. The INCF/OCNS Software WG[1] is happy to announce the next Dev Session where members of the developer teams of commonly used neuroscience software introduce their software and then discuss their *development* pipelines. ---- In the next Dev Session, Rick Gerkin will introduce the SciUnit framework and discuss its development: https://ocns.github.io/SoftwareWG/2021/06/04/dev-session-rick-gerkin-sciuni… The session will be held at June 21, 2021, 1600 UTC over Zoom: https://ucl.zoom.us/j/91246735902?pwd=WVdVK3I5SGdlaDFZdllDQ0w2djVBdz09 Click here to see the event in your local time: https://www.timeanddate.com/worldclock/fixedtime.html?msg=Dev+session%3A+Ri… SciUnit is a discipline-agnostic framework for model validation, handling all of the testing workflow by using a implementation-independent interface to models. SciUnit also contains code for visualization of model results, and command line tools for incorporating testing into continuous integration workflows. SciUnit is used in model validation in neuroscience via NeuronUnit, which implements an interface to several simulators and model description languages, handles test calculations according to domain standards, and enables automated construction of tests based on data from several major public data repositories. ------- The aim of these sessions is to stimulate discussion of the development practices and tools used by different teams to improve the software we use while also improving our knowledge of these practices and tools. We also hope to encourage more users of these tools to contribute to their development to ensure their longevity. If you develop software for neuroscience, we would love to hear about your development pipeline. Please get in touch with the Software WG on our communication channels[2]. The WG is a community based group that is open to everyone at all levels of their careers (academic or otherwise). Please introduce yourself to the community on our channels to get involved. [1] https://ocns.github.io/SoftwareWG/ [2] https://ocns.github.io/SoftwareWG/pages/contact.html On behalf of the Software WG, -- Thanks, Regards, Ankur Sinha (He / Him / His) Research Fellow at the Silver Lab | http://silverlab.org/ Department of Neuroscience, Physiology, & Pharmacology University College London, London, UK Time zone: Europe/London

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