- Comp-neuro - lists.cnsorg.org

Cajal Computational Neuroscience Course, Application deadline 28 March, 2022
by Gjorgjieva, Julijana March 22, 2022

March 22, 2022

Dear Students and Postdocs, There is still time to apply to the Cajal Computational Neuroscience course 2022! Application deadline: 28 March 2022 Apply here: http://cajal-training.org/on-site/ccn2022/ Stipends are available. Date and Location: 17 July - 6 August 2022 Champalimaud Center for the Unknown, Portugal Course directors: Brent Doiron, University of Chicago, US Maria Geffen, University of Pennsylvania, US Julijana Gjorgjieva, Max Planck Institute for Brain Research, Germany Joe Paton, Champalimaud Foundation, Portugal About the Cajal Computational Neuroscience Course The course teaches the central ideas, methods, and practices of modern computational neuroscience through a combination of lectures and hands-on project work. During the course’s mornings, distinguished international faculty deliver lectures on topics across the entire breadth of experimental and computational neuroscience. For the remainder of the time, students work on research projects in teams of 2 to 3 people under close supervision of expert tutors and faculty. Research projects are proposed by faculty before the course and include the modeling of neurons, neural systems, and behavior, the analysis of state-of-the-art neural data (behavioral data, multi-electrode recordings, calcium imaging data, connectomics data, etc.), and the development of theories to explain experimental observations. Confirmed Keynote Speakers: Megan Carey – Champalimaud Foundation, Portugal Alex Cayco-Gajic – École Normale Supérieure, France John Krakauer – Johns Hopkins University, USA Gilles Laurent – Max Planck Institute for Brain Research, Germany Máté Lengyel – Cambridge University, UK Ashok Litwin-Kumar – Columbia University, USA Christian Machens – Champalimaud Foundation, Portugal Olivier Marre – Vision Institute, France Ken Miller – Columbia University, USA Srdjan Ostojic – École Normale Supérieure, France Anne-Marie Oswald – University of Pittsburgh, USA Alfonso Renart – Champalimaud Foundation, Portugal Tim Vogels – IST Austria, Austria And others! CAJAL Advanced Neuroscience Training Programme is funded by FENS, IBRO and The Gatsby Foundation. For more information on the CAJAL programme: www.cajal-training.org<http://www.cajal-training.org> ----------------------------------------- Julijana Gjorgjieva, PhD Research Group Leader Max Planck Institute for Brain Research Max-von-Laue-Str. 4, Frankfurt Assistant Professor of Computational Neuroscience Technical University of Munich office: +49 69 850033 3600 https://www1.ls.tum.de/compneuro

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Call for Symposia - NEURONUS 2022 IBRO Neuroscience Forum (15-17 October 2022, Krakow, Poland)
by Michał Zaręba March 21, 2022

March 21, 2022

*On behalf of my colleagues, I would like to invite you to **submit symposia proposals for NEURONUS 2022 IBRO Neuroscience Forum, **which takes place on 15-17 October 2022 in Krakow, Poland. We await your proposals until 1 April 2022. More information can be found here: https://neuronusforum.pl/page/40,call-for-symposia <https://neuronusforum.pl/page/40,call-for-symposia>**.* With prominent speakers and unique atmosphere of one of the oldest and most beautiful Polish cities, NEURONUS IBRO Neuroscience Forums have established themselves in the European calendar of scientific events as a platform for communication between scientists from different fields of neuroscience. The program of the conference consists of numerous sessions on biological, cognitive, computational and medical aspects of neuroscience, creating a dynamic environment for sharing knowledge. The schedule of the meeting is further complemented with lectures by invited guests, and we invest a lot of effort to attract as influential neuroscientists as possible. This year we will host 6 keynote speakers including Lauri Nummenmaa (University of Turku, Finland), Florian Engert (Harvard University, Cambridge, USA) and Marina Bedny (Johns Hopkins University, USA). The remaining names will be announced soon. During the upcoming 12th edition of the conference, we will continue to put* emphasis on development of early-career researchers*. The main purpose of this event is to provide means for both young and experienced neuroscientists to share the latest discoveries, knowledge and experience in neuroscience, as well as make valuable contacts with scientists representing various fields of neurobiology. We actively promote young scientists through preferentially allocating oral presentations of their experimental results. To help us achieve this goal, we have opened the *call for symposia*. A symposium should last approximately 90 minutes and be composed of a talk by the Invited Speaker (of post-doc status or higher) and 3-4 talks given by early-career researchers. Early-career speakers may be proposed by the Symposium Organizer. At least two of the early-career speakers must be at pre-doctoral level. The general focus of the symposium should fall within the scope of biological and cognitive neuroscience. Please contact us if more information is needed. We strongly encourage you to join this special initiative and hope to see you in the beautiful scenery of Krakow! On behalf of my colleagues, Michal Zareba Organizing Committee Neuronus 2022 IBRO Neuroscience Forum

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Postdoctoral position in "Multiphysics Brain Aging Modeling" at Stevens Institute of Technology, New York City, USA
by Johannes Weickenmeier March 21, 2022

March 21, 2022

Dear all. A postdoctoral position in “Multiphysics Brain Aging Modeling” is available in the group of Prof. Johannes Weickenmeier (www.weickenmeierlab.com<http://www.weickenmeierlab.com>). The Matter Biomechanics Lab combines experimental methods to biomechanically characterize brain tissue properties and various computational modeling techniques (e.g. finite element analysis, multiphysics modeling, medical image analysis) with the ultimate goal to better understand healthy brain aging and neurodegenerative diseases. Our constitutive aging and Alzheimer’s disease models couple neurobiology and mechanics (i.e. morphological shape changes and tissue loading) in order to identify abnormal aging patterns and brain regions at risk of developing secondary damage, such as white matter hyperintensities, hypoperfusion, traumatic injury, and vascular degeneration. We validate our models against longitudinal imaging data from databases such as the Alzheimer’s Disease Neuroimaging Initiative (ADNI). We are looking for applications with prior experience in advanced medical image analysis, data analysis, and modeling. Knowledge in the biology of aging is a significant advantage. The research will be performed at the campus of Stevens Institute of Technology right outside of New York. The position is funded through a grant from the NIH. The position is available now until filled. To apply, please send a motivation letter, CV, and contact information for 2-3 references to Prof. Johannes Weickenmeier (johannes.weickenmeier (at) stevens.edu) Stay well, Johannes Weickenmeier _______________________________________ Johannes Weickenmeier, PhD, Assistant Professor and Director of the Center for Neuromechanics Stevens Institute of Technology | Department of Mechanical Engineering |phone: 201-216-5527 | pronouns: he/him/his | Soft Matter Biomechanics: www.weickenmeierlab.com<https://nam02.safelinks.protection.outlook.com/?url=http%3A%2F%2Fwww.weicke…>

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New INCF endorsement standard: MBF file format
by INCF March 21, 2022

March 21, 2022

We are pleased to inform you that on January 25 2022, the INCF Standards and Best Practices (SBP) committee <https://incf.org/about/governance/SBP-subcommittee> endorsed the MBF file format as a standard, with the standard number INCFSN-22-01 <https://www.incf.org/mbf-file-format-v-40>. All INCF standards undergo re-review every two years. MBF Bioscience and INCF will work together to further improve the FAIRness of the standard until the next review, including implementation of the governance policy and modification of the standard’s license from the CC-BY-ND-NC to a CC-BY-ND. The committee is pleased to see an open format from a commercial entity go through the endorsement process, and applaud MBF Bioscience for taking this very important step in support of open and FAIR neuroscience. See the community review <https://f1000research.com/documents/10-712> Read the endorsement statement <https://f1000research.com/documents/11-336> *Why endorse community standards? * INCF (incf.org) has implemented a formal procedure for evaluating and endorsing community standards and best practices in support of the FAIR principles. Our mission is to make neuroscience more open and FAIR, to ensure that research funds and efforts are well invested, and that neuroscientific findings are robust and replicable. Open community review is a very important step in the process. Quality community standards are necessary to make FAIR resources and processes work, but too many neuroscience communities lack robust standards or have competing incompatible standards. The rapid development of new techniques also means that there is a continuous need for new and updated standards, and that old standards need an active developer and user community keeping them up to date. By endorsing standards, INCF wants to: - Make it easy to find the best, most reliable standard appropriate for your research - Ensure recognition for community members investing their time and effort in standards Similar to other standards, the review criteria <https://incf.org/incf-standards-review-criteria-v20> include: - Openness - FAIRness - Design, testing, and implementation - Governance - Adoption and use - Stability and support - Extensibility - Comparison (similarity to other standards)

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2022 Neuro-Inspired Computational Elements Conference -- Final Agenda -- March 29-April 1 Virtual!
by Aimone, James Bradley March 21, 2022

March 21, 2022

Dear colleagues, The final agenda for NICE 2022 has been published here https://flagship.kip.uni-heidelberg.de/jss/HBPm?mI=235&m=showAgenda This is the 9th annual NICE meeting, and we will be virtual again this year due to global travel considerations related to the COVID-19 pandemic. NICE covers the neuromorphic computing field with parallel considerations of the neuroscience inspiration and application drivers of brain-inspired computing technologies. Keynote talks Stefano Fusi (Columbia University) Jeff Clune (University of British Columbia) Please join us! Brad Aimone 2022 NICE Organizing Committee -------------------------- James Bradley Aimone, Ph.D. Cognitive and Emerging Computing Department Center for Computing Research Sandia National Laboratories Phone: (505) 284-3147 Fax: (505) 844-4728 http://neuroscience.sandia.gov

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4-year postdoc in cognitive science
by Dominik Endres March 21, 2022

March 21, 2022

The research group for Theoretical Cognitive Science of Prof. Dr. Dominik Endres at the Department of Psychology, Philipps Universität Marburg, Germany, is currently accepting applications for a *** Postdoctoral Researcher **** We expect the successful applicant to independently develop, implement and execute virtual reality experiments for the validation of (deep) learning and Bayesian models of human behavior and perception and/or to develop, implement and analyze these models. Contributions to scientific publications and regular and active participation in the CRC’s scientific program are required. More details about the project's research directions can be found in these publications: https://dl.acm.org/doi/10.1145/3355401 https://jov.arvojournals.org/article.aspx?articleid=2678770 https://ieeexplore.ieee.org/document/7829376 https://psycnet.apa.org/doi/10.1037/rev0000330 The position is offered for a period of 4 years, if no former times of qualification need to be considered. The starting date is as soon as possible. The position is full-time with salary and benefits commensurate with a public service position in the state Hesse, Germany (TV-H E 13). The position is a part of the project C6 (sensorimotor primitives, collaboratively supervised by Prof. D. Endres, Prof. A. Schütz and Prof. A. Schubö) of the DFG-funded *** Collaborative Research Center CRC/TRR 135 “Cardinal Mechanisms of Perception” *** More Information on the CRC can be found at http://www.allpsych.uni-giessen.de/sfb/index_en.html. Formal requirements are a qualified degree (diploma, master or equivalent) in psychology, cognitive science, computer science, engineering or physics (Master, Diploma, or comparable), a completed or nearly completed PhD as well as demonstrable programming experience in a high-level language, e.g. Python. We expect you to be interested in the topic of the project (to be documented in a motivation letter (1 page max), in which you may refer to prior experiences, for instance, a thematically pertinent thesis, student research assistant positions, etc.), developing virtual-reality scenarios and technology for research purposes as well as quantitative modelling. Advantageous qualifications are prior exposure to machine learning, Bayesian statistics, experience with human behavioral experiments as well as willingness to acquire basic German language skills. The full job advert can be found at https://www.uni-marburg.de/de/universitaet/administration/verwaltung/dezern… Please send your application (including a project-specific motivation letter in English, relevant diplomas, curriculum vitae and contact details of two potential referees) mentioning reference no. fb04-0010-wmz-2022 only as a single PDF file to dominik.endres(a)uni-marburg.de, before 15.04.2022. Feel free to contact Prof. Dr. Dominik Endres, mailto:dominik.endres@uni-marburg.de for more information. -- Prof. Dr. Dominik Endres Theoretische Kognitionswissenschaft - Theoretical Cognitive Science FB 04 Psychologie Tel: 06421-28 23818

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PhD funded opportunity
by Eirini Mavritsaki March 18, 2022

March 18, 2022

PhD funded opportunity (computational cognitive psychology) https://www.bcu.ac.uk/social-sciences/research/phd_opportunities Title: Covid-19 effects on Cognitive Health School: School of Social Sciences The COVID-19 pandemic has affected everyday life and cognitive health including sustained attention and depression (Hampshire et al., 2021; Zhou et al., 2020 (a)(b)). However, little is known about whether depression is due to COVID-19 infection, or an effect of cognitive decline caused by the COVID-19, as depression is also linked to changes in attention and memory (Fossati, 2018; Dillon & Pizzagalli, 2018). Therefore, it is imperative to understand the interaction between cognition and depression, an area of research that is poorly understood in recent work related to COVID-19 and how this is progressing over time. Here, we propose to investigate the link between COVID-19 and cognitive health - depression, cognitive flexibility, and attention. We are using an interdisciplinary approach that combines online behavioural data with computational modelling using a computational approach developed by our team. Contact information: Name: Prof. Eirini Mavritsaki E-mail: eirini.mavritsaki(a)bcu.ac.uk<mailto:eirini.mavritsaki@bcu.ac.uk> Tel: 0121 331 6361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Prof. Eirini Mavritsaki, Ph.D., CPsychol , SFHEA, SEDA Recognised Supervisor Professor of Cognitive Psychology Director of Research for the School of Social Sciences Department of Psychology Faculty of Business Law and Social Sciences Birmingham City University The Curzon Building 4 Cardigan Street Birmingham B4 7BD eirini.mavritsaki(a)bcu.ac.uk<mailto:eirini.mavritsaki@bcu.ac.uk> 0121 331 6361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

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Postdoctoral position in the cognitive neuroscience of aging at UC Riverside and Irvine
by Aaron Seitz March 18, 2022

March 18, 2022

A postdoctoral position in the cognitive neuroscience of aging is available at the University of California, Riverside (UCR) to work with a research team including Professors Xiaoping Hu, Aaron Seitz, Ilana Bennett, and Weiwei Zhang at UCR, and in collaboration with Megan Peters at UC Irvine. This opportunity will involve working on a NIA-funded project to understand how individual differences in the structure and function of the locus coeruleus moderate perception and memory in an older adult population. The postdoctoral researcher is expected to take a lead role in the project, including setting up experiments, collecting and analyzing data, training and supervising graduate students and undergraduate research assistants, and disseminating results at conferences and in research publications. https://aprecruit.ucr.edu/JPF01540 Successful candidates should have a strong background in fMRI data collection and analysis, advanced computational and statistical competencies, management skills, creativity and a high-level of conscientiousness. They should also have expertise in one or more of the following areas (and knowledge of the others): cognitive aging, brain aging, psychophysics, perception or memory processes, eye-tracking, metacognition, and the role of the locus coeruleus in cognition. Experience in programming psychophysical experiments, in either MATLAB or Python, is preferred. Researchers must possess a doctoral degree in Psychology, Education, Cognitive Science, Neuroscience, or a related field. The primary appointment will be either in the UCR Psychology or Bioengineering Departments, depending upon candidate interest and primary expertise. Working with our diverse research team will provide a unique interdisciplinary research and mentoring experience. Research will be conducted at the UCR Center for Advanced Neuroimaging, which features a 3T Prisma fMRI system with state of the art eye-tracking and psychophysical systems. Applications must include a cover letter, curriculum vitae, 1-2 sample publications, statement of research interests, statement of past and/or planned future contributions to advancing diversity and inclusive excellence, and the names of three to five references with phone numbers and emails. Review of applications will begin on April 7, 2022 and may continue until the position is filled. Applications received by April 7, 2022 will receive full consideration. UCR is a world-class research university with an exceptionally diverse student body. Its mission is explicitly linked to providing routes to educational success for underrepresented and first-generation college students. A commitment to this mission is a preferred qualification. The University of California is an Equal Opportunity/Affirmative Action Employer. All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, age, disability, protected veteran status, or any other characteristic protected by law. Best, -Aaron ************************************************** Aaron Seitz, Ph.D. Professor of Psychology Director of UCR Brain Game Center University of California, Riverside 900 University Ave. Riverside, CA 92521 Ph: (951) 827-6422 Fax: (951) 827-3985 Email: aseitz(a)ucr.edu<mailto:aseitz@ucr.edu> Web: http://faculty.ucr.edu/~aseitz/ BGC: http://braingamecenter.ucr.edu<http://braingamecenter.ucr.edu/> **************************************************

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PhD studentships at University of Hertfordshire, UK
by Nada Yousif March 17, 2022

March 17, 2022

Applications are invited by the Centre for Future Societies Research for three fully funded PhD studentships at the University of Hertfordshire. These research studentships will be part of the University Alliance (UA) Doctoral Training Alliance in Future Societies, and include the proposed project: "Low-cost, accessible neurostimulation, experiments and simulations" to be supervised by Dr Nada Yousif and Prof Volker Steuber. The PhD project will combine experimental cerebellar stimulation and computational modelling of the cerebellum to show the feasibility of low-cost, accessible non-invasive neurostimulation for treating movement disorders. Please see the Centre for Future Societies Research web page where project details are held on https://www.herts.ac.uk/research/centres/centre-for-future-societies-resear… and the external advert on https://www.jobs.ac.uk/job/CND466/three-fully-funded-phd-research-studentsh…. Closing date for applications: 22nd April 2022. Interviews will start soon after the closing date. Studentship start date: September 2022. For informal enquiries contact Dr Nada Yousif (n.yousif(a)herts.ac.uk<mailto:n.yousif@herts.ac.uk>) or Prof Volker Steuber (v.steuber(a)herts.ac.uk<mailto:v.steuber@herts.ac.uk>, biocomputation.herts.ac.uk<http://biocomputation.herts.ac.uk/>). Dr Nada Yousif School of Physics, Engineering and Computer Science University of Hertfordshire +44 (0)1707 284129 n.yousif(a)herts.ac.uk<mailto:n.yousif@herts.ac.uk> go.herts.ac.uk/nada_yousif https://sites.google.com/view/nada-yousif/home

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EBRAINS Brain Simulation School 2022, 30 May – 3 June 2022, REGISTRATION DEADLINE: 30 April 2022
by Luca Leonardo Bologna March 17, 2022

March 17, 2022

We are glad to announce the *EBRAINS Brain Simulation School 2022* to be held in Palermo, Italy, from 30 May to 3 June, 2022. The EBRAINS Brain Simulation School 2022 aims at introducing the participants to the latest achievements and innovations of the *digital infrastructure for brain research EBRAINS* (ebrains.eu), created by the Human Brain Project. The School will offer tutorials on EBRAINS Tools and eServices. The students will be presented with the overview of the EBRAINS research platform, discussed by the leaders of the Human Brain Project, and gain practical skills in using EBRAINS resources to implement cellular and network level computational models, to use *EBRAINS Computing Services* configure and run simulations, and to visualise/analyse the results. Through tutorials, interactive sessions and hands-on activities, attendees will learn how to interact with EBRAINS to *carry out their own research*, to set up and manage a data-driven collaborative project, or to use the EBRAINS platform to interact with internal and external databases. The *target audience* of this school are advanced master students, doctoral students and postdoctoral researchers in biomedical and technology sciences, from medicine, biology, psychology, to mathematics, informatics, information technology, physics, chemistry, who would like to get an *introduction to the neuroinformatics and computational neuroscience tools available in the EBRAINS Infrastructure*. Registrations close on *30 April, 2022*. The event is limited to *40 participants*. Registration and Program are available on the School website: https://www.humanbrainproject.eu/en/education/BRAINSIM/ The School Scientific Chairs & Organizers Michele Migliore, Aušra Saudargienė, Francesca Spataro, Alessia Bonafede

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