September 2018 - Comp-neuro - lists.cnsorg.org

Open Ph.D. position on whole-brain calcium imaging at Technical University of Munich
by Gil Westmeyer 10 Sep '18

10 Sep '18

We are currently looking for a Ph.D. Student interested in functionally dissecting whole-brain calcium imaging data with cellular resolution obtained from zebrafish larvae undergoing systematic perturbations of neuronal activity. Our laboratory (westmeyerlab.org) at the School of Medicine of Technical University of Munich (https://www.tum.de/nc/en/homepage/) and The Institute for Biological and Medical Imaging (IBMI) http://www.helmholtz-muenchen.de/en/ibmi/ focuses on biological engineering of molecular sensors and actuators for neurobehavioral imaging. We have built a molecular imaging pipeline consisting of state-of-the-art fluorescent imaging techniques including neurobehavioral methods to simultaneously image behavior and brain activity in freely behaving animals (see for example NeuBtracker.org). We complement these dataset with exoeriments conducted by Light Sheet Microscopy and Light Field microscopy to obtain imaging volumes with high temporal sampling and confocal / 2-photon microscopy. We also capture calcium signaling from adult zebrafish and rodent brains using combined acquisitions with optoacoustic tomography or MRI. For our inter-disciplinary work, we are actively collaborating within Europe and in particular also with MIT and Caltech. If you are interested in computational analyses of whole-brain calcium imaging data, please visit westmeyerlab.org and submit a brief statement of your research interests and your CV to Gil Westmeyer.

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postdoc positions in statistical neuroscience
by xaq pitkow 07 Sep '18

07 Sep '18

POSITION: We seek several highly motivated postdoctoral research fellows for a collaborative team project building statistical tools for interpreting large scale neural recordings (10^5 neurons per animal). The fellows will develop new methods and applications of probabilistic graphical models to infer statistical interactions amongst neurons and with their environment. The tools will be validated in neural network simulations, tested in physiological recordings, and made widely available to the neuroscience community for understanding data from next-generation experiments. TEAM: Fellows will join principal investigators and theorists Krešimir Josić, Genevera Allen, Xaq Pitkow, Ankit Patel, and Robert Rosenbaum. The team will interact closely with experimentalists including co-Investigator Andreas Tolias and several other labs interested in applying novel methods we develop. Fellows will also be members of the new Center for Neuroscience and Artificial Intelligence housed at the Baylor College of Medicine and supported in part by the NSF NeuroNex program. The Center brings together interdisciplinary researchers from across Houston, including members from Baylor College of Medicine, Rice University, University of Houston, and University of Texas Health Sciences. Researchers at the Center contribute diverse expertise in fields including neuroscience, machine learning, statistics, physics, computer science, electrical engineering, and applied mathematics. QUALIFICATIONS: Candidates must have outstanding mathematical skills, a PhD in a relevant quantitative discipline, and expertise in probabilistic graphical models or statistical machine learning. APPLYING: Applicants should email a letter of research interests and CV to Camila Lopez (Camila.Lopez at bcm.edu), along with contact information for three references. We look forward to hearing from you!

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Multiple Faculty Positions in Neuroengineering, Rice University
by Caleb Kemere 07 Sep '18

07 Sep '18

Multiple Assistant Professor Positions in Neuroengineering Rice University in Houston, Texas Rice University’s School of Engineering invites applicants for multiple open tenure-track faculty positions at the assistant professor level in the emerging and broad area of neuroengineering. Research areas of interest include but are not limited to, development of technologies for interfacing with and manipulating the nervous system, as well as computational, data, and theory-driven approaches to improve our understanding of the function of the brain, neurological disorders, and treatment outcomes. Rice University has recently launched a $50 million initiative in neuroengineering to support growing research and education programs in neuroengineering, signal processing, data science, sensing, and nano-electronics with great national and international visibility. A Ph.D. is required, or the Ph.D. requirements must be fulfilled by July 1 of the year employment commences, and the successful applicants will be required to teach undergraduate and graduate courses and build successful research programs. Applicants should submit a cover letter, curriculum vitae, statement of research and teaching interests, and at least three references through school’s faculty application website: http://jobs.rice.edu/postings/16626/ Applications for this position will be reviewed on a rolling basis beginning December 15, 2018, through January 15, 2019. The positions are expected to be available July 1, 2019, and successful candidates can choose any of the nine departments in the school of engineering as their home department. Additional information can be found on our website: http://neuroengineering.rice.edu/ Caleb Kemere : 713-348-6089 / 832-356-6089 : MS-384 : BRC727 : http://rnel.rice.edu Asst. Prof, Rice University Electrical & Computer Engineering

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Open Faculty Positions in Cognitive and Information Sciences at the University of California, Merced
by David Noelle 06 Sep '18

06 Sep '18

Four Open Faculty Positions Assistant Professor of Cognitive and Information Sciences University of California, Merced The Department of Cognitive and Information Sciences (CIS) at the University of California, Merced seeks applicants for four (4) tenure-track faculty positions at the Assistant Professor level. CIS is a highly interdisciplinary group offering bachelor’s degrees in Cognitive Science and Philosophy as well as an intensive research-based PhD in Cognitive and Information Sciences. We seek outstanding scholars who will establish and maintain creative research paradigms, participate actively in the development of interdisciplinary programs, and teach and mentor effectively at both the undergraduate and graduate levels. Applicants must have either a strong research record or evidence of the potential to develop an independent and innovative research program. We are especially seeking candidates whose research involves one or more of the following areas: (1) Cognitive and Data Science, (2) Language, Communication, and Culture, and (3) Applied Ethics. Applicants must hold a PhD in a relevant discipline, such as Cognitive Science, Psychology, Philosophy, Neuroscience, Linguistics, Computer Science, or Anthropology, by the position start date, which is anticipated to be July 1, 2019. Applications must be received no later than November 15, 2018 to be considered. For further information, please visit “https://aprecruit.ucmerced.edu/apply/JPF00699”.

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Hearst Postdoc position at Rhodes College in Memphis
by Blustein_Daniel 06 Sep '18

06 Sep '18

Dear Colleagues! We are hiring for a unique post-doctoral position in any area of neuroscience for someone from an historically underrepresented minority group. The position has teaching and research responsibilities and can convert to a tenure-track appointment after two years. The ad is below and I'm happy to answer any questions. Sincerely, Dan Blustein Assistant Professor of Psychology Neuroscience Program Rhodes College Phone: 901-843-3963 | Twitter: @bloostein | web: www.danblu.com Neuroscience Hearst Post-Doctoral Fellowship Ad (2018-2019) Rhodes College invites applicants for a two-year William Randolph Hearst Post-Doctoral Fellowship in Neuroscience<http://www.rhodes.edu/neuro> (area of specialization open) for aspiring faculty from historically underrepresented minority groups in higher education. The position will begin in Fall 2019. Candidates completing a successful two-year fellowship will be considered for conversion to a tenure-track appointment. Rhodes College greatly values diversity of faculty, staff, and students. In 1988 Rhodes College received a gift from the William Randolph Hearst Foundations to establish a fellowship for aspiring faculty from underrepresented minority groups. A primary goal of the fellowship is to provide teaching and research experience at a liberal arts college and mentorship toward a successful teacher-scholar career. The successful candidate will contribute to an interdisciplinary Neuroscience major that includes faculty from Biology, Psychology, Chemistry, and Philosophy. Candidates must have earned a Ph.D. in Neuroscience or a related field (e.g., Biology, Psychology, Chemistry) by August 2019. Teaching responsibilities will include 3 lecture or seminar courses per year, including an introductory lecture course in Neuroscience, and a senior seminar course for Neuroscience majors. Research will be supported by start-up funds and lab space. Extensive opportunities for collaborative research are available through our partnerships with St. Jude Children's Research Hospital, University of Memphis, University of Tennessee Health Science Center, and Le Bonheur Children's Hospital. Founded in 1848, Rhodes College is a highly selective, private, residential, undergraduate college, located in Memphis, Tennessee. We aspire to graduate students with a lifelong passion for learning, a compassion for others, and the ability to translate academic study and personal concern into effective leadership and action in their communities and the world. We encourage applications from candidates interested in helping us achieve this vision<https://www.rhodes.edu/content/rhodes-vision>. Rhodes College values an inclusive and welcoming environment. We are an equal opportunity employer committed to diversity<http://handbook.rhodes.edu/diversity> (http://handbook.rhodes.edu/diversity) in the workforce. Memphis has a metropolitan population of over one million and provides multiple opportunities for research and for cultural and recreational activities<http://www.rhodes.edu/content/our-city> (http://www.rhodes.edu/content/liberal-arts-city). Please apply online at jobs.rhodes.edu<https://jobs.rhodes.edu/>. A complete application includes a cover letter, a curriculum vitae, a statement of teaching philosophy, a research plan, graduate transcripts, up to three representative publications, three letters of recommendation, and a separate statement that addresses how your experiences with teaching, scholarship, and/or service might contribute to a college community that includes a commitment to diversity and inclusion as one of its core values. Please address in your cover letter your interest in a postdoctoral fellowship like the William Randolph Hearst Teaching Fellowship and in teaching at a liberal arts college. Review of completed applications will begin on November 16th and continue until the position is filled. The online application system will solicit letters of recommendation electronically from the candidate's recommenders, once their contact information has been entered and all other required application materials have been submitted. Rhodes College policy requires background checks before candidates can be brought to campus for interviews. For further information, please contact Dr. David Kabelik, kabelikd(a)rhodes.edu<mailto:kabelikd@rhodes.edu>.

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Workshop- Sept 28th, 2018. Latest Advances in Understanding Complex Spatial Navigation
by Fellous, Jean-Marc - (fellous) 05 Sep '18

05 Sep '18

WORKSHOP - Friday Sept 28th, 2018 INSERM U1208, Bron/Lyon, France Latest Advances in Understanding Complex Spatial Navigation in Animals, Computational Models and Neuro-inspired Robots The goal of this one-day workshop is to discuss the latest advances in understanding the neural mechanisms of complex spatial navigation using experimental studies in Animals, Computational Neuroscience and Neuro-robotics. The format of the workshop will be 30 minute presentations giving emphasis on studies that relate at least 2 of the 3 techniques (Animals, Computational Neuroscience and Neuro-robotics). The succinct presentation format will allow for ample time for discussion of current and future advances in the area, and collaboration opportunities. Registration is free but required. The workshop will be limited to 30 people. Registration : http://spaq2018.robolat.org/registration Website : http://spaq2018.robolat.org/ Schedule (subject to change, please check the website): 8:45: Peter Dominey: Introduction and Welcome 9:00: Jean-Marc Fellous - Complex Spatial Navigation and the Dorso-Ventral Hippocampal Axis 9:30: Peter Dominey - Cortico-Hippocampal Interaction for Synthesis of Novel Adaptive Experiences 10:00: Alfredo Weitzenfeld - Multi-Scale Spatial Navigation 10:30 - 11:00 Break 11:00: Laurenz Wiskott - Self-Organization of Place Cells in the Hippocampus 11:30: Philippe Gaussier - The Hippocampo-cortical Loop: Spatial and Temporal Dimensions of information Processing 12:15 - 14:00 Lunch 14:00: Sidney Wiener - Navigational Rule and Strategy Related Activity in the Hippocampal-Prefrontal-Striatal System, and Neuromodulator Relations 14:30: Mehdi Khamassi - Hippocampal Replays under the Scrutiny of Reinforcement Learning Models: From Theory to Neurorobotics Experimentation Back to Biology 15:00: Jeff Krichmar - Conjunctive Coding in an Evolved Spiking Model of Retrosplenial Cortex 15:30 - 16:00 Break 16:00: Francesco Battaglia - Chasing Cell Assemblies in Cortico-Hippocampal Neural Ensembles 16:30: Michael Arbib - From Visual Construction and Spatial Navigation to Episodic Memory and Imagination 17:00 - 17:30 Discussion Sponsored by the National Science Foundation and the Agence Nationale pour la Recherche (CRCNS-ANR Collaborative grant) >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>

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EEG Basic Oscillations Workshop
by TORRALBA CUELLO, MIREIA 05 Sep '18

05 Sep '18

Dear all, It is our pleasure to announce the first edition of Barcelona EEG Basic Oscillations Workshop (BEBOW) that will take place in UPF next 26-28th September in Barcelona. The BEBOW is organized by the Multisensory Research Group, part of Cognition and Brain Center and aims at enabling students to perform time-frequency analysis of the EEG (electroencephalography) signal for neurocognitive research. The workshop will cover experimental design and how to perform time-frequency analysis from a theoretical and a practical point of view. It is addressed to master and PhD students, and post-docs who already have some experience with EEG/ERP analyses. You can find more information in the website of BEBOW <https://eventum.upf.edu/21978/detail/barcelona-eeg-basic-oscillations-works…> . Mireia Torralba Cuello Multisensory Research Group Center for Brain and Cognition, Universitat Pompeu Fabra Address: Edifici Mercè Rodoreda 24.313 c\ Ramon Trias Fargas, 25-27 08005 Barcelona http://www.mrg.upf.edu Tel +34 935422745

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NEURON Course at SFN 2018 meeting
by Ted Carnevale 05 Sep '18

05 Sep '18

Space is still available for the NEURON course at this year's meeting of the Society for Neuroscience. Are you a lab director trying to decide whether to add computational modeling to your research program? A grad student or postdoc who is just getting started in modeling? An established NEURON user who wants to find out about NEURON's latest features? If so, this one-day course is for you! The course starts with a practical introduction that reviews basic concepts and presents a workflow for building and using models of cells and networks, and moves on to topics that include: --how to speed up simulations --how to use Python with NEURON (and take advantage of NEURON's GUI!) --how to model reaction-diffusion with the RxD class For more information and the registration form, see https://neuron.yale.edu/neuron/static/courses/sd2018/sd2018.html --Ted

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High Performance Computing workshop at SFN 2018 meeting
by Ted Carnevale 04 Sep '18

04 Sep '18

This year's workshop on High Performance Computing Resources for Parallel Simulations and Data Analysis will be held on Saturday, Nov. 3, from 8:30 AM to 12:30 PM in downtown San Diego as a satellite to the 2018 meeting of the Society for Neuroscience. It will feature presentations from developers and users of powerful hardware and software tools for dealing with computationally-intensive modeling and data analysis tasks. For more information and a link to the registration form, see https://neuron.yale.edu/neuron/static/courses/nsg2018/nsg2018.html The registration deadline for this workshop is Friday Oct. 12, but you should sign up early because space is limited. --Ted

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Postdoctoral position available in computational muscle modelling
by Sang-Hoon Yeo 04 Sep '18

04 Sep '18

Postdoctoral position available: Active spring muscle model - a new phenomenological model of skeletal muscle mechanics Understanding Machina Carnis, how our muscles mechanically generate movement, is one of the fundamental research questions in human movement science and also has significant implications in many application areas. Phenomenological muscle models, such as the Hill-type muscle model, have been widely used in studies on motor control and biomechanics. However, the performances of such models in predicting the dynamic contractile behaviours of the muscle, such as eccentric or sub-maximal contractions, are known to be far from accurate. This BBSRC (Biotechnology and Biological Sciences Research Council, United Kingdom)–funded postdoctoral research associate will join Dr Sang-Hoon Yeo’s research group to develop a new phenomenological model of the skeletal muscle mechanics. The key idea is to incorporate a newly proposed “active spring model” that involves titin as the third filament, together with actin and myosin filament, that actively regulates the mechanical behaviour of the muscle (see figures below). This new model is expected to be effectively utilized in various areas involving musculoskeletal simulation models, where the current prevalent use of the Hill-type model is identified as a major limiting factor. For two years starting in early 2019, the research associate will lead the first stage of the study focusing on in-vitro muscle/fiber experiments and model development. The research programme includes one-month visits to two prominent muscle biomechanics laboratories: 1) Prof Walter Herzog’s lab in University of Calgary (Calgary, Canada) and 2) Prof Kiisa Nisikawa’s lab in Northern Arizona University (Flagstaff, USA) to carry out data collection. Based on the collected data, the research associate will lead the data analysis, computational modelling and simulation of a new muscle mechanics model, and will also collaborate with other research associates to apply the developed muscle model to human biomechanics. The host institution, The University of Birmingham, is a Russell Group university in the vibrant City of Birmingham, United Kingdom. The university has produced eleven affiliated Nobel laureates and is also known as a cradle of modern muscle mechanics, dating back to the seminal work of Peter Rack and David Westbury. The School of Sport Exercise and Rehabilitation Sciences, where the research associate will be based, is a world-leading research institution in sport science, ranked 5th in the world (QS World Ranking, Sport-related subject). This highly interdisciplinary project is waiting for an ambitious and open-minded individual with substantial experience in computational motor control and muscle/musculoskeletal biomechanics. Individuals whose expertise lies in engineering and physical science and want to apply your skills in muscle biomechanics are also strongly encouraged to apply. Experience in wet-lab work is preferred but not strictly required. If you are interested to apply, please contact the principal investigator Dr Sang-Hoon Yeo (s.yeo(a)bham.ac.uk) to initiate discussion. Best wishes, Sang-Hoon -- Dr Sang-Hoon Yeo Lecturer in Biomechanics and Motor Control School of Sport, Exercise & Rehabilitation Sciences The University of Birmingham Edgbaston, Birmingham, B15 2TT, United Kingdom +44(0)121 414 8748

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