November 2018 - Comp-neuro - lists.cnsorg.org

Creating a list of important computational predictions
by Yiota Poirazi Jan. 4, 2021

Jan. 4, 2021

Dear all, I believe you would agree that, the greatest recognition of our computational work comes with the experimental verification of our computational predictions. To highlight the most important outcomes of our theoretical work and facilitate a closer interaction with experimental labs so as to increase the chances of our predictions being experimentally tested, I would like to encourage you to nominate your favorite prediction at the following google form: https://docs.google.com/forms/d/e/1FAIpQLSeJZ2RrXJ0nZonIuyNzN0Cl gXDKDb7xTzoJOiqZTGxm9Kh7ow/viewform?c=0&w=1&usp=mail_form_link This effort started during the CNS 2017 meeting in Antwerp with the support of the OCNS Board. The resulting list will be posted on the CNS 2017 web site and disseminated in social media, as a reference for experimentalists. Thank you very much for supporting this important effort! Best wishes, Yiota Poirazi -- Panayiota Poirazi, Ph.D. Research Director Computational Biology Laboratory Institute of Molecular Biology and Biotechnology (IMBB) Foundation of Research and Technology-Hellas (FORTH) Vassilika Vouton, P.O.Box 1385, GR 70013, Heraklion, Crete GREECE Tel: +30 2810 391139 Fax: +30 2810 391101 Εmail: poirazi(a)imbb.forth.gr Lab site: www.dendrites.gr FENS-Kavli Network of Excellence <http://www.fens.org/Outreach/FENS-Kavli-Network-of-Excellence/> -- This message has been scanned for viruses and dangerous content by *E.F.A. Project* <http://www.efa-project.org>, and is believed to be clean. Click here to report this message as spam. <http://mailgate1.imbb.forth.gr/cgi-bin/learn-msg.cgi?id=4BCD7A00A1.A57D7&to…> -- Panayiota Poirazi, Ph.D. Research Director Computational Biology Laboratory Institute of Molecular Biology and Biotechnology (IMBB) Foundation of Research and Technology-Hellas (FORTH) Vassilika Vouton, P.O.Box 1385, GR 70013, Heraklion, Crete GREECE Tel: +30 2810 391139 Fax: +30 2810 391101 Εmail: poirazi(a)imbb.forth.gr Lab site: www.dendrites.gr FENS-Kavli Network of Excellence <http://www.fens.org/Outreach/FENS-Kavli-Network-of-Excellence/>

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[publication and call for dialog] IEEE CIS Newsletter on Cognitive and Developmental Systems
by Pierre-Yves Oudeyer Jan. 23, 2020

Jan. 23, 2020

Dear colleagues, we are happy to announce the release of the latest issue of the IEEE CIS Newsletter on Cognitive and Developmental Systems (open access). This is a biannual newsletter addressing the sciences of developmental and cognitive processes in natural and artificial organisms, from humans to robots, at the crossroads of cognitive science, developmental psychology, artificial intelligence, machine learning and neuroscience. It is available at: https://goo.gl/NAwBfD Featuring dialog: === "Curiosity as Driver of Extreme Specialization in Humans" == Dialog initiated by Celeste Kidd with responses from: Elizabeth Bonawitz, Maya Zhe Wang, Brian Sweis, Benjamin Hayden, Susan Engel, Abigail Hsiung, Shabnam Hakimi, Alison Adcock, Moritz Daum, Arjun Shankar, Tobias Hauser, Goren Gordon and Perry Zurn == Topic: Curiosity-driven learning is probably one of the most fundamental mechanisms in human learning, and yet it is also probably one of the least understood. Broadly construed as spontaneous exploration and engagement with activities or material without any extrinsic goal (as opposed to searching for information useful for an extrinsic goal), many mysteries remain to be uncovered. What are the causal links between curiosity and learning? How does prior knowledge about a topic or an activity relates to curiosity about this topic? What is the role of curiosity in life-span development? Can human curiosity explain the apparently unique tendency of humans for extreme specialization? Reversely, how do different forms of curiosity (diversive or specific) evolve as children grow up and become adults? While early computational models of curiosity propose theoretical approaches to understand their cognitive mechanisms, how can we understand the affective/ emotional dimensions of curiosity? And how has the linguistic concept of “curiosity” evolved in occidental culture? Call for new dialog: === « Leveraging Adaptive Games to Learn How to Help Children Learn Effectively" == Dialog initiated by George Kachergis == Topic: How can one achieve efficiently “translational educational sciences” and get these principles used in real-world large-scale educational technologies? In this dialog, Georges Kachergis highlights challenges related to collaborations between cognitive scientists and game developers, how to deploy real world experiments, and how to enable scientific understanding when many variables cannot easily be controlled? Those of you interested in reacting to this dialog initiation are welcome to submit a response by December 15th, 2018. The length of each response must be between 600 and 800 words including references (contact pierre-yves.oudeyer(a)inria.fr) Let us remind you that all issues of the newsletter are all open-access and available at: https://goo.gl/ZjjZNz I wish you a stimulating reading! Best regards, Pierre-Yves Oudeyer, Editor of the IEEE CIS Newsletter on Cognitive and Developmental Systems Research director, Inria Head of Flowers project-team Inria and Ensta ParisTech, France http://www.pyoudeyer.com Twitter: https://twitter.com/pyoudeyer and Fabien Benureau, Editorial Assistant Cognitive NeuroRobotics Unit, Okinawa Institute of Science and Technology 1919-1 Tancha, Onna, Okinawa Japan Email: fabien.benureau [at] oist [dot] jp

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Postdoc positions on Consciousness Research at Monash Uni, Australia
by Naotsugu Tsuchiya Jan. 13, 2020

Jan. 13, 2020

Position A: DP180100396 (in collaboration with Masafumi Oizumi, Hiroto Kawasaki, Giulio Tononi) No report paradigm in EEG/MEG/intracranial recordings and the analysis of integrated information across sensory and prefrontal cortex Position B: DP180104128 (in collaboration with Marta Garrido, Ueli Rutishauser, Ralph Adolphs) The analysis of MEG/intracranial recordings, using Granger causality and integrated information We are looking for highly talented postdocs (application from PhD students with a prospect of getting PhD in 1 year are welcomed) for the above two ARC-funded positions. Ideal candidates in both positions would have strong publications, strong programming skills in Matlab/Python, strong background in data analysis, preferably neuroimaging data or neural spikes. The projects include 1) design of various psychophysical paradigms (*pdf <https://academic.oup.com/nc/article/doi/10.1093/nc/niw023/2970153/Are-we-un…>)*, including no-report paradigms (*pdf <https://drive.google.com/file/d/0B9N0ysU85rs7bEF5d1VVX3J4T3c/view>*), which can be used for subsequent EEG/MEG/intracranial recording experiments and 2) analysis of EEG/MEG/intracranial data using the approximations of integrated information (link1 <http://www.eneuro.org/content/4/5/ENEURO.0085-17.2017>, *link <https://drive.google.com/open?id=0B9N0ysU85rs7NFVSQlIza215eVU> *, *link <http://www.pnas.org/content/early/2016/12/02/1603583113.abstract>*, *link <http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.10046…>)* ). Please send the inquiry with your CV to naotsugu.tsuchiya(a)monash.edu. Applicants with most fit background and skills will be contacted for subsequent interview over the internet. The positions will be available until they are filled. Regards Nao Tsuchiya -- -- *Nao (Naotsugu) Tsuchiya* Associate Professor *Monash Institute of Cognitive and Clinical Neurosciences* Attention and Memory Program School of Psychological Sciences Monash University 770 Blackburn Monash Brain Imaging facility, Clayton, VIC 3800 Australia T: +61 3 9905 4564 E: naotsugu.tsuchiya(a)monash.edu W: homepage: http://users.monash.edu.au/~naotsugt/Tsuchiya_Labs_Homepage http://med.monash.edu.au/psych/email-sig/miccn-email-sig.jpg <http://www.monash.edu/neuro-institute/> 2. Visiting Researcher at Department of Dynamic Brain Imaging, Advanced Telecommunications Research (ATR), Japan 3. Visiting Researcher at CiNet, Osaka University, Japan orcid.org/0000-0003-4216-8701

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Professorship in Artificial Intelligence
by Steuber, Volker May 8, 2019

May 8, 2019

Professor of Artificial Intelligence University of Hertfordshire, UK School of Computer Science, College Lane Campus, Hatfield Salary £58,293 to £64,397 pa dependent on skills and experience FTE: Full time position working 37 hours per week (1.0FTE) Duration of Contract: Permanent position Closing date: 3 September 2018 Applications are invited for an exceptionally well qualified Professor of Artificial Intelligence of international standing who shares our commitment to research-informed teaching, embraces the research impact agenda, and values collegiality. Applicants will strengthen existing activity within the School and develop it further, enhancing the research strengths and external reputation of the School of Computer Science and contributing significantly to its performance in future research assessments and collaborations with public and commercial partners. The successful applicant will connect to and complement the research conducted by the Adaptive Systems Research Group within the Centre for Computer Science and Informatics Research. The School hosts the University of Hertfordshire Robot House, a facility ubiquitously equipped with low-cost sensors providing a realistic environment for experiments with robotics in a smart home; a fully-fledged RoboCup lab for development of humanoid robots participating in international competitions, and a large variety of different robotic platforms, including iCub and Baxter. We encourage applications from researchers across a wide spectrum of AI, and particularly encourage applications from researchers working on emerging topics in AI. Possible fields include, but are not limited to: • Machine learning: reinforcement learning, Deep Methods, statistical methods, large scale data modelling/intelligent processing and high-performance learning algorithms • Robotics: embodied and/or cognitive robotics, HRI, robot safety, emotional/social robots, smart homes and sensors, sensor fusion, assistive robotics • Complex Systems: collective intelligence, adaptive, autonomous and multi-agent/robot systems, collective and swarm intelligence, social and market modelling, adaptive, evolutionary and unconventional computation • Mathematical Modelling: statistical modelling, information-theoretic methods, compressive sensing, intelligent data visualization, multiscale models, optimization • Emerging Topics in AI: computer algebra and AI, topological methods (e.g. persistent homology), modern topics in games and AI • AI and applications: financial modelling, AI and biology/physics/cognitive sciences • Foundations: fundamental questions of intelligence and computation, emergence of life/intelligence, Artificial Life As well as providing research supervision at PhD and MSc level, the School of Computer Science offers modules in Artificial Intelligence, machine learning, neural and evolutionary computing, as well as Artificial Life on the BSc and MSc programmes. Applicants will be committed to a strong research and research-informed teaching agenda, and will actively contribute to increase research impact of the School, in the enthusiastic, welcoming and collegiate environment of the school. Applicants must hold a PhD (or equivalent) in a relevant subject, possess excellent communication skills in English, an internationally excellent research record and reputation, including publications of the highest quality suitable for submission to the REF (UK Research Excellence Framework). Applicants are expected to show evidence of experience and success in research/commercial income generation, engagement with the research impact agenda, engagement with key stakeholders in the relevant Artificial Intelligence community and management and leadership ability. The professor will have opportunity to contribute actively to interdisciplinary research projects at the school and university level. Applications must be made online https://www.herts.ac.uk/contact-us/jobs-and-vacancies/academic-vacancies?, reference 016194?. Informal enquiries may be addressed to Dr Volker Steuber (Associate Dean Research, v.steuber(a)herts.ac.uk) or Professor William Clocksin (Dean of School, w.clocksin(a)herts.ac.uk) Please note that applications sent directly by email will not be accepted.

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[journals] CfP : Special Issue on Continual Unsupervised Sensorimotor Learning
by Nguyen, Sao Mai March 14, 2019

March 14, 2019

Dear Colleagues, IEEE Transactions on Cognitive and Developmental Systems is currently running a Special Issue entitled " Continual Unsupervised Sensorimotor Learning". Dr. José Antonio Iglesias Martínez, Assoc. Prof. We would like to invite you to prepare a research article or a comprehensive review to be published in this special issue. AIM AND SCOPE Although machine learning algorithms continue to improve at a rapid pace enabling technologies and products such as autonomous driving cars and sophisticated image and speech recognition, it is often forgotten that these applications represent tailored solutions to specific tasks. Thus it is not clear if or how these autonomous systems can pave the road to general purpose machines envisioned by many. The pursuit for higher levels of autonomy and versatility in robotics is arguably lead by two main factors. Firstly, as we push robots out of the labs and productions lines, it becomes increasingly difficult to design for all possible scenarios that a particular robot might encounter. Secondly, the cost of designing, manufacturing, and maintaining such systems becomes prohibitive. As the algorithms for learning single tasks in restricted environments are improving, new challenges have gained relevance in order to get more autonomous artificial systems. These challenges include multi-task learning, multimodal sensorimotor learning and lifelong adaptation to injury, growth and ageing. Addressing these challenges promise higher levels of autonomy and versatility of future robots. This special issue on Continual Unsupervised Sensorimotor Learning is primarily concerned with the developmental processes involved in unsupervised sensorimotor learning in a life-long perspective, and in particular the emergence of representations of action and perception in humans and artificial agents in continual learning. These processes include action-perception cycle, active perception, continual sensory-motor learning, environmental-driven scaffolding, and intrinsic motivation. The special issue will highlight behavioural and neural data, and cognitive and developmental approaches to research in the areas of robotics, computer science, psychology, neuroscience, etc. Contributions might focus on mathematical and computational models to improve robot performance and/or attempt to unveil the underlying mechanisms that lead to continual adaptation to changing environment or embodiment and continual learning in open-ended environments. Contributions from multiple disciplines including cognitive systems, cognitive robotics, developmental and epigenetic robotics, autonomous and evolutionary robotics, social structures, multi-agent and artificial life systems, computational neuroscience, and developmental psychology, on theoretical, computational, application-oriented, and experimental studies as well as reviews in these areas are welcome. THEMES This special issue aims to report state-of-the-art approaches and recent advances on Continual Unsupervised Sensorimotor Learning with a cross-disciplinary perspective. Topics relevant to this special issue include but are not limited to: Emergence of representations via continual interaction Continual sensory-motor learning Action-perception cycle Active perception Environmental-driven scaffolding Intrinsic motivation Neural substrates, neural circuits and neural plasticity Human and animal behaviour experiments and models Reinforcement learning and deep reinforcement learning for life-long learning Multisensory robot learning Multimodal sensorimotor learning Affordance learning Prediction learning SUBMISSION Manuscripts should be prepared according to the “Information for Authors” of the journal found at http://cis.ieee.org/component/content/article/7/131-ieee-transactions-on-au…. Submissions must be done through the IEEE TCDS Manuscript center: https://mc.manuscriptcentral.com/tcds-ieee. Please select the category “SI: Continual Unsupervised Sensorimotor Learning”. IMPORTANT DATES 6th January 2019 – Paper submission deadline 15th March 2019 – Notification for authors 31st May 2019 – Deadline revised papers submission 30th June 2019 – Final notification for authors 31st July 2019 – Deadline for camera-ready versions September 2019 – Expected publication date More information on Continual Unsupervised Sensorimotor Learning http://projects.au.dk/socialrobotics/news-events/show/artikel/special-issue… GUEST EDITORS Nicolás Navarro-Gerrero Aarhus University, Aarhus, Denmark nng(a)eng.au.dk Sao Mai Nguyen IMT Atlantique, Francenguyensmai(a)gmail.com Erhan Öztop Özyeğin University, Turkeyerhan.oztop(a)ozyegin.edu.tr Junpei Zhong National Institute of Advanced Industrial Science and Technology (AIST), Japanjoni.zhong(a)aist.go.jp ---- Nguyen Sao Mai nguyensmai(a)gmail.com Researcher in Cognitive Developmental Robotics http://nguyensmai.free.fr

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Postdoctoral positions in computational neuroscience and artificial intelligence
by Maxim Bazhenov March 1, 2019

March 1, 2019

Applications are invited for post-doctoral research positions in the laboratory of Dr. Maxim Bazhenov at the University of California, San Diego to study memory and learning and to develop neuroscience inspired computer algorithms capable of continual learning and adapting to the novel situations and contexts.This project involves close collaboration with the experimental laboratory of Dr. Bruce McNaughton (UC Irvine). The ultimate goal of the work is to advance the knowledge of how human and animal brains learn from experience and apply these principles to the artificial systems to enable continuous learning without catastrophic forgetting. The successful candidate will collaborate with a team of researchers to design neural network models of dynamic interactions between the hippocampus and neocortex during learning and memory consolidation in sleep and awake based on experimental data. These models will be used to derive learning principles that can be combined with advances in artificial intelligence and machine learning. An ideal candidate should have experience in computational/theoretical neuroscience and a basic knowledge of machine learning, or, alternatively, experience in machine learning algorithms and some basic knowledge of neuroscience. Experience with hierarchical learning, reinforcement learning, and/or goal-directed decision-making would be particularly helpful. The University of California offers excellent benefits. Salary is based on research experience. Applicants should send a brief statement of research interests, a CV and the names of three references to Maxim Bazhenov at mbazhenov(a)ucsd.edu -- Maxim Bazhenov, Ph.D. Professor, Department of Medicine, Neurosciences Graduate Program, UCSD, School of Medicine http://www.bazhlab.ucsd.edu/

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Columbia Workshop on Brain Circuits, Memory and Computation 2018
by Aurel A. Lazar Dec. 16, 2018

Dec. 16, 2018

Columbia Workshop on Brain Circuits, Memory and Computation 2018 <http://www.bionet.ee.columbia.edu/workshops/bcmc/2018> BCMC 2018 March 15-16, 2018 Center for Neural Engineering and Computation <http://cnec.columbia.edu/> Columbia University, New York, NY, USA Overview The goal of the workshop is to bring together researchers interested in developing executable models of neural computation/processing of the brain of model organisms. Of interest are models of computation that consist of elementary units of processing using brain circuits and memory elements. Elementary units of computation/processing include population encoding/decoding circuits with biophysically-grounded neuron models, non-linear dendritic processors for motion detection/direction selectivity, spike processing and pattern recognition neural circuits, movement control and decision-making circuits, etc. Memory units include models of spatio-temporal memory circuits, circuit models for memory access and storage, etc. A major aim of the workshop is to explore the integration of various sensory and control circuits in higher brain centers. A Fruit Fly Brain Hackathon <http://www.bionet.ee.columbia.edu/hackathons/ffbh/2018> is being conducted in conjunction with the workshop. Workshop participants are welcome to attend the hackathon. Registration Registration is free but all participants have to register <https://bcmc2018.eventbrite.com/>. Thank you! Organizer and Program Chair Aurel A. Lazar <http://www.ee.columbia.edu/~aurel>, Department of Electrical Engineering, Columbia University. Program Overview (Confirmed Speakers) Misha B. Ahrens <https://www.janelia.org/lab/ahrens-lab>, Janelia Research Campus, Ashburn, VA. Davi Bock <https://www.janelia.org/lab/bock-lab>, Janelia Research Campus, Ashburn, VA. Claude Desplan <https://wp.nyu.edu/desplanlab/>, Department of Biology, New York University. Mark A. Frye <http://www.fryelab.net/>, Department of Integrative Biology and Physiology, University of California, Los Angeles. C. Giovanni Galizia <http://neuro.uni-konstanz.de/03team/content/galizia.html>, Department of Biology, University of Konstanz. Maria N. Geffen <https://geffenlab.weebly.com/maria.html>, Department of Otorhinolaryngology and Department of Neuroscience, University of Pennsylvania. Hokto Kazama <http://kazama.brain.riken.jp/index.php>, Riken Brain Science Institute, Tokyo. Donggen Luo <http://mgv.pku.edu.cn/?co=posts&ac=faculty&catalog=enpiintro&pname=en_Dongg…>, McGovern Institute for Brain Research, Peking University, Beijing. Thomas Nowotny <http://www.sussex.ac.uk/profiles/206151>, Department of Informatics, University of Sussex. Pavan Ramdya <https://ramdya-lab.epfl.ch/home>, Brain Mind Institute, EPFL, Lausanne. Aravinthan D.T. Samuel <https://scholar.harvard.edu/aravisamuel/home>, Department of Physics and center for Brain Science, Harvard University. Simon G. Sprecher <http://www.sprecherlab.com/simon-sprecher/>, Department of Biology, University of Fribourg. Seth Tomchik <http://www.scripps.edu/tomchik/>, The Scripps Research Institute Florida. Joshua T. Vogelstein <http://jovo.me/>, Dept. of Biomedical Engineering and Institute for Computational Medicine, Johns Hopkins University. Scott Waddell <https://www.dpag.ox.ac.uk/research/waddell-group>, Department of Physiology, Anatomy and Genetics, University of Oxford. Anthony M. Zador <http://zadorlab.cshl.edu/>, Cold Spring Harbor Laboratory. Aurel http://www.bionet.ee.columbia.edu

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Postdoc position in Geometric Methods for Machine Learning and Deep Learning at RIST
by Luigi Malagò Dec. 14, 2018

Dec. 14, 2018

=========================================================== *Subject*: Postdoc position in Machine Learning (1 year, renewable up to 2 years) *Institution*: RIST - Romanian Institute of Science and Technology, Cluj-Napoca *Keywords*: Geometry of Latent Spaces, Optimization over Manifolds, Information Geometry, Natural Gradient, Riemannian Geometry *Application deadline*: 10 October 2018 (applicants are encouraged to apply earlier) *Salary*: around 2200 euro net *Official announcement*: http://rist.ro/en/details/news/postdoc-positions-in-deep-learning-and-machi… =========================================================== Dear colleagues, the Romanian Institute of Science and Technology (RIST) has an opening for a postdoc position, in the context of the DeepRiemann project “Riemannian Optimization Methods for Deep Learning”, funded by European structural funds through the Competitiveness Operational Program (POC 2014-2020). The appointments will be for 1 year, with possible extensions up to 2 years. The DeepRiemann project aims at the design and analysis of novel training algorithms for Neural Networks in Deep Learning, by applying notions of Riemannian optimization and differential geometry. The task of the training a Neural Network is studied by employing tools from Optimization over Manifolds and Information Geometry, by casting the learning process to an optimization problem defined over a statistical manifold, i.e., a set of probability distributions. The project is highly interdisciplinary, with competences spanning from Machine Learning to Optimization, Deep Learning, Statistics, and Differential Geometry. The objectives of the project are multiple and include both theoretical and applied research, together with industrial activities oriented to transfer knowledge, from the institute to a startup or spin-off of the research group. The positions will be part of the new Machine Learning and Optimization group https://rist.ro/en/teams.html, which performs research at the intersection of Machine Learning, Stochastic Optimization, Deep Learning, and Optimization over Manifolds, using geometric methods based on Information Geometry. The group is one of two newly-formed groups in Machine Learning at RIST. The official job announcement can be seen here: http://rist.ro/en/details/news/postdoc-positions-in-deep-learning-and-machi… Informal inquiries can be sent to Dr. Luigi Malagò <malago(a)rist.ro>, principal investigator of the DeepRiemann project. Application deadline: 10 October 2018 (applicants are encouraged to apply earlier) best regards, Luigi Malagò

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Researcher in NLP with focus on "identification of early signs of cognitive abnormalities in language"
by Dimitrios Kokkinakis Nov. 30, 2018

Nov. 30, 2018

*Type of employment:* Fixed-term employment, research position (12 months) *Extent*: 100 % *Location*: Department of Swedish, Gothenburg, Sweden *First day of employment: *2019-01-01 or as agreed. *Apply by*: 2018-12-13 *The position focus*:* identification of early signs of cognitive abnormalities in language* *Details of the post and instructions on how to apply are available from this link*: < *https://www.gu.se/english/about_the_university/job-opportunities/vacancies-details/?id=3417* <https://www.gu.se/english/about_the_university/job-opportunities/vacancies-…> *>* *Qualifications*: Ph.D. in Natural Language Processing (NLP), preferably in computer science with a strong focus on NLP and/or automatic speech processing (ASP), and *preferably *with a specialization in prior work related to mental and neurological impairments The Swedish Language Bank (SB) is a research unit at the Department of Swedish, University of Gothenburg. SB is the coordinating partner of the research project: “*Linguistic and extra-linguistic parameters for early detection of cognitive impairment*”. The successful applicant will conduct research in this project and particularly in the area in NLP and/or ASP in order to develop, adapt, analyze, and implement methods for processing *available* spoken and transcribed data samples acquired from people with mild and subjective forms of cognitive impairment as well as healthy controls (i.e. differentiating the different groups and/or identifying early cognitive abnormalities such as atypical language production, that precede the onset of dementia, especially Alzheimer’s). In particular, you will be using machine learning and other related techniques (deep learning) and develop, evaluate and deploy classification models and tools for experimenting with the data. Inquiries can be made to Dimitrios Kokkinakis ( dimitrios.kokkinakis(a)svenska.gu.se)

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'la Caixa' INPhINIT PhD opportunity at MCEN/BCAM and UChicago on neuron-glial connectomics
by Maurizio De Pitta Nov. 29, 2018

Nov. 29, 2018

Dear colleagues, please share with whoever could be interested and forward to your department mailing lists. PhD project : Structure and function of the glial connectome. Lab / Host institution : Group of Mathematical, Computational and Experimental Neuroscience (MCEN) at the Basque Center of Applied Mathematics (BCAM). Supervisors : Maurizio De Pittà (BCAM), SerafimRodrigues (BCAM), Narayanan Kasthuri (The University of Chicago, and Argonne National Labs). Location : Bilbao, The Basque Country, Spain. Duration : 3 years. Stipend : 30k+ EUR/year + mobility allowance. Starting date : May—Oct 2019 (negotiable). Award type: Preselection + competitive call. Categories: Incoming (for international students not living in Spain at the time of the call) and Retaining (for Spanish students) Preselection deadline: January 13th, 2019 (incoming); February 9th, 2019 (retaining). Application deadlines: February 6th, 2019 (incoming); February 27th, 2019 (retaining) (more details: https://goo.gl/HZCPxp) Scientific background : Neurons of the brain form complex circuits, connecting each other by means of synapses. The structure of these circuits is believed to closely relate with their function. Accordingly, mapping the architecture of neural circuits of the brain, otherwise known as the brain’s neuronal connectome, is a prominent area of investigation of modern neuroscience. In parallel, there is growing awareness that glial cells such as astrocytes, could modulate the physical structure of the neuronal connectome. Astrocytes indeed form barriers to neuronal connectivity and regulate synapse formation and deletion, but they could also modulate neuronal signal transmission in the extracellular space, along with structure and dynamics of synapses. In addition, astrocytes contact hundreds of thousand synapses, and are also connected in complex networks. This suggests that understanding the neuronal connectome should also include neuron-astrocyte interactions and thus mapping of the associated glial connectome in terms of synapse-astrocyte and astrocyte-astrocyte connections. Workplan : The candidate will be part of an international team of researchers within the framework of the Open Connectome Project (https://neurodata.io/) She/He will deploy mathematical tools borrowed from graph theory, statistical analysis, machine learning and algebraic topology to analyze big data sets from 3D electron microscopy of cortical tissue of rodent’s brain to seek the first map of astrocytic connections with synapses at subcellular spatial resolution. In parallel the candidate will develop expertise in modeling of complex heterogeneous cell networks of neurons and astrocytes, to explore potential functional relevance of specific synapse-astrocyte circuits and motifs in neuron-glial networks. Working environment : The candidate will be based in Bilbao (Spain) where she/he will work under the supervision of Drs. Maurizio De Pittà and Serafim Rodrigues at the Group of Mathematical, Computational and Experimental Neuroscience at the Basque Center of Applied Mathematics (BCAM). In addition, the candidate will also collaborate with and be supervised by Dr. Narayanan “Bobby” Kasthuri at the University of Chicago and Argonne National Labs (USA), where she/he will spend regular periods of time during her/his graduate training. Dr. De Pittà is a leading expert on computational modeling of neuron-glia interactions, with an experience in computational neuroscience of 10+ years who recently joined the MCEN group at BCAM as « Junior Leader » fellow with a start-up grant supported by la Caixa Banking Foundation. The MCEN group is a rapidly growing team led by Ikerbasque Professor Serafim Rodrigues, that was established in 2016 as part of the strategic research portfolio enacted by the Basque Country to foster interdisciplinary research in Neuroscience. Dr. Kasthuri is one of the leading experts in modern connectomics, who has pioneered large volume automated electron microscopy for mapping neuronal connections and synchrotron source X-ray microscopy to map the cellular composition of entire brains. BCAM is one of the Severo Ochoa’s excellence centers for scientific research in Spain and it provides an exeptionally fertile international environment for professional development and enriching scientific collaborations. Bilbao, as the capital of the Basque Country in Spain, is a vibrant, friendly city with one of the highest standards of life quality in Spain. Requirements : -- Master’s degree (or equivalent) in Physics, Mathematics, Engineering, or related fields. -- Excellent English skills (oral and written). – Experience in machine learning and/or statistical analysis and/or topology or algebraic topology. -- Programming skills in Matlab, Python and C/C++. -- High motivation for interdisciplinary research with strong interests for biological details and an analytic mindset. – Capacity to meet deadlines and outstanding propensity to work in an international dynamic environment. -- Essential knowledge of neuroscience and graph theory is preferred but not required. Additional notes : This is a cutting-edge project that ideally matches with outstanding and creative candidates, with a strong motivation for international collaborations, mobility, and independence. The candidate will work on the project full-time and no part-time agreements will be taken into consideration. Application process : The INPhINIT PhD Fellowship Program by la Caixa Banking Foundation is the most prestigious PhD fellowship program running in Spain. The program is highly competitive and offers unequalled training an financial support to its fellow. The ideal successful candidate should have an outstanding educational background and rank among the 5% best of his/her class. Candidates who are interested in the advertised PhD project, must first send a CV with letter of motivation (max 2 pages) to Drs. De Pittà (mdepitta(a)bcamath.org) and Kasthuri (bobbykasthuri(a)uchicago.edu) for review and preselection. Preselections are open now till January 13, 2019 (for incoming candidates) and February 3rd, 2019 (for retaining candidates). Specify as mail object: “INPhINIT PhD Project Application”. Relevant References: De Pittà et al., Astrocytes: orchestrating synaptic plasticity?, Neuroscience, 2015, 323:43. Katshuri et al., Saturated reconstruction of a volume of neocortex, Cell, 2015, 162 :648 Relevant links: Official call by BCAM: https://goo.gl/Vq8mto INPhINIT: https://goo.gl/d761sP BCAM homepage: https://goo.gl/ENSBAo Maurizio De Pittà: https://goo.gl/pJXEYJ Narayanan “Bobby” Kasthuri: https://goo.gl/pYmv2w Open Connectome Project: https://neurodata.io/ ----- Maurizio De Pitta' Research Fellow MCEN -- Group of Mathematical, Computational and Experimental Neuroscience BCAM -- Basque Center of Applied Mathematics https://sites.google.com/site/mauriziodepitta/home

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CFP Frontiers Research Topic: Closing the Loop: From Human Behavior to Multisensory Robots
by Pablo Barros Nov. 29, 2018

Nov. 29, 2018

Call For Papers - Frontiers Research Topic: Closing the Loop: From Human Behavior to Multisensory Robots I. Aim and Scope The ability to efficiently process crossmodal information is a key feature of the human brain that provides a robust perceptual experience and behavioral responses. Consequently, the processing and integration of multisensory information streams such as vision, audio, haptics, and proprioception play a crucial role in the development of autonomous agents and cognitive robots, yielding an efficient interaction with the environment also under conditions of sensory uncertainty. This Research Topic invites authors to submit new findings, theories, systems, and trends in multisensory learning for intelligent agents and robots with the aim to foster the development of novel and impactful research which will contribute to the understanding of human behavior and the development of artificial systems operating in real-world environments. II. Potential Topics Topics include, but are not limited to: - New methods and applications for crossmodal processing and multisensory integration (e.g. vision, audio, haptics, proprioception) - Machine learning and neural networks for multisensory robot perception - Computational models of crossmodal attention and perception - Bio-inspired approaches for crossmodal learning - Multisensory conflict resolution and executive control - Sensorimotor learning for autonomous agents and robots - Crossmodal learning for embodied and cognitive robots III. Submission - Abstract - 18th January 2019 - Paper Submission - 12th May 2019 More information: https://www.frontiersin.org/research-topics/9321/closing-the-loop-from-huma… IV. Guest Editors Pablo Barros, University of Hamburg, Germany Doreen Jirak, Hamburg University, Germany German I. Parisi, Apprente, Inc., USA Jun Tani, Okinawa Institute of Science and Technology, Japan -- Dr. Pablo Barros Postdoctoral Research Associate - Crossmodal Learning Project (CML) Knowledge Technology Department of Informatics University of Hamburg Vogt-Koelln-Str. 30 22527 Hamburg, Germany Phone: +49 40 42883 2535 Fax: +49 40 42883 2515 barros at informatik.uni-hamburg.dehttp://www.pablobarros.nethttps://www.inf.uni-hamburg.de/en/inst/ab/wtm/people/barros.htmlhttps://www.inf.uni-hamburg.de/en/inst/ab/wtm/

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Faculty position in Computational Neuroscience and AI at the University of Edinburgh
by Matthias Hennig Nov. 28, 2018

Nov. 28, 2018

The Institute for Adaptive and Neural Computation at the University of Edinburgh is inviting applications for a Lecturer/Senior Lecturer/Reader (Assistant/Associate professor) position in Computational Neuroscience and Artificial Intelligence. This position is part of an expansion of research and teaching in cognition, neuroscience, and AI. Candidates should have inter-disciplinary research interests, combining computational and machine learning based methods and cognitive science, and be able to teach undergraduate and master’s level courses in areas such as AI and machine learning, in addition to teaching in cognitive science. The closing date is 15. Jan 2019. For further details and to apply, go to: https://www.vacancies.ed.ac.uk/pls/corehrrecruit/erq_jobspec_version_4.jobs… Edinburgh is also recruiting faculty in Computational Cognitive Science: https://www.vacancies.ed.ac.uk/pls/corehrrecruit/erq_jobspec_version_4.jobs… -- The University of Edinburgh is a charitable body, registered in Scotland, with registration number SC005336.

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Cognitive, Computational, and Systems Neuroscience Training Program at University of Oregon
by Luca Mazzucato Nov. 27, 2018

Nov. 27, 2018

The Institute of Neuroscience (ION) at the University of Oregon is welcoming applications for graduate training in neuroscience (deadline December 1st 2018). The training program in Cognitive, Computational, and Systems Neuroscience ( CCSN <http://ion.uoregon.edu/content/cognitive-computational-and-systems-neurosci…>) is sponsored by the University of Oregon Institute of Neuroscience, the nation's first research institute of its kind. In keeping with the innovative origins of the Institute, the CCSN program provides a rare opportunity for graduate students to forge experimental and theoretical links between systems and cognitive neuroscience while becoming experts in their field of choice. We believe that such interdisciplinary training positions our graduates to become leaders in the growing field of integrative and behavioral neuroscience. The Computational Neuroscience core of the CCSN includes Yashar Ahmadian's and Luca Mazzucato's labs, in close collaboration with all other ION labs (Chris Doe, Santiago Jaramillo, Bryce Kuhl, Shawn Lockery, David McCormick, Cris Niell, Matt Smear, Mike Wehr, and many others). The heart of our program is thesis research. Twenty eight faculty members drawn from the departments of Biology, Psychology, and Mathematics serve as research mentors and instructors. These researchers use a wide range of approaches including molecular biology, genetics, electrophysiology, optogenetics, functional brain imaging, and computational neuroscience to tackle fundamental questions in the neuronal basis of perception, behavior, memory, and cognition. CCSN faculty study not only humans but a wide range of model organisms including C. elegans, Drosophila, zebrafish, and rodents. As a result, students enrolled in our PhD program come away with the broad conceptual and technical skills necessary to run an independent neuroscience research lab or pursue many other related career paths. Our state-of-the-art facilities and excellent support staff allow ION members to progress rapidly by making exploratory or pilot experiments accessible. When not "at the bench," trainees follow a customizable course of study that leads from a year-long graduate core course to a variety of elective courses that allow students to go deeper into their specialty. In addition to course work, trainees learn in a variety of interactive settings including lab meetings, journal clubs, seminars, bi-monthly research-in-progress meetings, and institute retreats. These activities, together with a culture of openness and engagement among CCSN faculty members, create a degree of cohesiveness that sets CCSN apart from programs at other universities. We're passionate about creating an inclusive environment that promotes and values diversity. Research institutions that are diverse in gender, gender identity, race, sexual orientation, ethnicity, age, and perspective are proven to foster greater creativity and promote synergistic, collaborative innovation and interactions. Our application deadline is December 1, 2018. If interested in applying, please contact David McCormick (davidmc(a)uoregon.edu) David A. McCormick Director, Institute of Neuroscience davidmc(a)uoregon.edu

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2 openings in vision rehabilitation and multi-modal data modelling: 1 PhD and 1 RA/postdoc
by Paul Matusz Nov. 27, 2018

Nov. 27, 2018

Institute of Information Systems at HES-SO in Valais and Foundation for the Blind in Lausanne (Switzerland) are looking for 1 PhD student and 1 RA/postdoc (open rank) interested in links between (eye) health, neuroscience and modelling links between sensory/ perceptual - brain - cognitive processes. Our project aims to asssess the potential of virtual reality games in the rehabilitation of the most common pediatric vision disorder - amblyopia ("lazy eye"). The recovery potential is assessed at the level of both the usual, basic vision skills (visual acuity or 3D vision) and functional "visual" skills like age-appropriate literacy skills. The project likewise aims to establish the role therein of different selective attention systems (visual, multisensory), as studied with rigorous experimental paradigms combined with the advantages of EEG and multi-variate EEG/ERP analyses (eg. Murray et al. 2008 BTOP; Tivadar & Murray 2018 ORM tinyurl.com/y8uxonnf ). The project is well-suited for students interested in modelling multi-modal clinical pediatric data and clinical change in the areas of medicine, neuroscience and/or cognition. More details here: https://drive.google.com/file/d/1VpzIFBz1wzrqHQNqEsD3CnktbD2axGgv/view Paul (Pawel) Matusz, Ph.D. Junior Group Leader Institute of Information Systems, HES-SO – Radiology, University Hospital Centre & University of Lausanne, Sierre – Lausanne, Switzerland Adjunct Assistant Professor Hearing & Speech Sciences, Vanderbilt University, Nashville, TN, USA https://groupforrealworldneuroscience.wordpress.com/ https://twitter.com/paweljmatusz +41 213141547

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Graduate Program in Computational Neuroscience at Tübingen - Deadline Jan 15th
by Philipp Berens Nov. 27, 2018

Nov. 27, 2018

The Master program "Neural Information Processing - Computational Neuroscience" covers theoretical and computational aspects of neuroscience. Faculty include: Peter Dayan, Matthias Bethge, Zhaoping Li, Martin Giese, Alexander Ecker, Philipp Berens, Fabian Sinz, Anna Levina and many more! Students obtain extensive training in computational modeling of neural systems, machine learning data analysis and neuroscience. While the first year is dedicated to course work at the graduate level, the second year provides hands-on research experience in leading labs in lab rotations and during thesis work. After finishing the Master program, students can smoothly transition to our PhD program and continue their research. The program provides research-oriented training in a wide spectrum of basic computational neuroscience topics with different options: machine learning for neuroscience and neural data analysis models of neural dynamics and coding motor control, rehabilitation robotics and brain-computer interfaces systems neuroscience and neurophysiology data science, bioinformatics and programming behaviour and cognition The deadline for applications is January, 15th (written documents must be in Tübingen). For more information please visit: https://www.bccn-tuebingen.de/education/master-of-science-neural-informatio… Please forward to interested students at the BSc level. -- Prof. Dr. Philipp Berens University of Tübingen Institute for Ophthalmic Research http://www.berenslab.org phone: +49-7071-2988833

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Three Postdocs in Epilepsy and Brain-Computer Interfaces, Melbourne, Australia
by David Grayden Nov. 27, 2018

Nov. 27, 2018

Three Postdocs in Epilepsy and Brain-Computer Interfaces ARC Training Centre in Cognitive Computing for Medical Technologies The University of Melbourne and IBM Research - Australia http://jobs.unimelb.edu.au/caw/en/job/898108/research-fellows-in-epilepsy-3… We have created a new research training centre dedicated to Cognitive Computing for Medical Technologies and are now looking for outstanding Research Fellows to join on us on three-year appointments. This is an exciting joint venture between the Department of Biomedical Engineering and the School of Computing and Information Systems in collaboration with our research partners IBM Research Australia, University of South Australia, Western Sydney University, RMIT University, and CSIRO. Our focus is to create a workforce that is expert in developing, applying, and integrating artificial intelligence technologies in data-intensive medical contexts by facilitating the next generation of data-driven and machine learning-based medical technologies. The Three Roles: 1. Epileptic Seizure Prediction - in this project, you will work to develop and apply state-of-the-art machine learning approaches for epileptic seizure prediction as well as assessing the efficacy of epilepsy medication. 2. Epilepsy Modelling - in this project, you will help understand the causes and behaviours of epileptic seizures and develop high fidelity models for seizure prediction. This will be done by bringing together neural models of the brain with machine learning. 3. Brain-Computer Interfaces - in this project, you will work to develop a neural network-based brain-computer interface that can be used to control augmentative devices for people with speech, vision or motor disorders. We are interested in applications from those whose expertise aligns with and reflects strengths in Biomedical Engineering, Electrical Engineering, Mathematics and Computer Science. We are also interested in specific experience in programming skills, machine learning, signal processing and computational neuroscience. Applications close: 07 Jan 2019 11:55 PM AUS Eastern Daylight Time Details: http://jobs.unimelb.edu.au/caw/en/job/898108/research-fellows-in-epilepsy-3… Regards, David Professor David B. Grayden Head of Department Dept of Biomedical Engineering Melbourne School of Engineering The University of Melbourne, Victoria 3010 Australia http://www.bme.unimelb.edu.au | https://www.linkedin.com/in/dgrayden

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open rank faculty position in Human Movement Science at Northeastern, Boston, MA
by Marta Russo Nov. 26, 2018

Nov. 26, 2018

The Department of Biology at College of Science and the Department of Physical Therapy, Movement and Rehabilitation Science at the Bouve College of Health Sciences invites nominations and applications for a tenure track faculty position (open rank, from the Assistant to the Full Professor rank). Applicants are encouraged to submit their application by November 29, 2018 to receive full considerations, but review of applications will continue until the position is filled. More info can be found below or here <https://neu.peopleadmin.com/postings/57607.>. Informal inquiries can be addressed to: Dr. Dagmar Sternad, Chair of the Search Committee (d.sternad(a)northeastern.edu) Apologies for multiple posting. -- Marta Russo, PhD Postdoctoral Research Associate Action Lab Office: 503 Richards Hall Mail: 134 Mugar Life Sciences Building Northeastern University 360 Huntington Avenue Boston, MA 02115 m.russo(a)northeastern.edu *Faculty Position in Human Movement Science* *Northeastern University, Boston, MA* *Assistant, Associate, or Full Professor* *A tenure-track position is open in Human Movement Sciences in the Department of Biology, College of Science and the Department of Physical Therapy, Movement and Rehabilitation Science, Bouve College of Health Sciences, at Northeastern University.* The position is open for applicants from the Assistant to the Full Professor rank. The candidate’s research can be in the areas of experimental, computational, or clinical human movement, with a possible bridge to prosthetics and robotics. This position is part of a growing university-wide cluster in the science of human movement, spanning research strengths from basic experimental and computational research to rehabilitation science, robotics, and neuroengineering. Priority will be placed on research strengths that complement existing strengths in computational human movement science, rehabilitation science, neurophysiology, neuroimaging, and control theory, although excellence is of top-most priority. Depending on the research profile, an affiliated appointment with Bioengineering or Electrical and Mechanical Engineering is possible. The anticipated start date is Fall Semester, 2019. Responsibilities will include conducting an independent, externally funded research program, teaching undergraduate and graduate courses, and participating in departmental, college and university service. Qualified candidates should have experience in, or be able to demonstrate a commitment to, working with diverse student populations and/or in a culturally diverse work and educational environment. The Department of Biology is strongly interdisciplinary, with 20 tenured and tenure-track faculty in Biology and an additional 9 faculty with joint appointments in other departments. The department administers programs in the College of Science at Northeastern University for 1,200 undergraduates, and 100 students in Ph.D., Masters, and Professional Masters programs. The Department of Physical Therapy, Movement and Rehabilitation Sciences, located within Bouvé College of Health Sciences, is comprised of 10 tenured and tenure track faculty and 20 clinical faculty. The Department offers a Ph.D. program in Human Movement and Rehabilitation Sciences, as well as one of the oldest and largest Doctorate in Physical Therapy (DPT) programs in the country. Grounded in its signature co-op program, Northeastern provides unprecedented global experiential learning opportunities. Northeastern University occupies a vibrant 67-acre campus in the heart of Boston, surrounded by other leading educational, health care, technological, and research institutions, as well as world-renowned venues for art and music. Applicants must have a PhD in the life sciences, including physical medicine and physical therapy, neuroscience, neurophysiology, bioengineering, electrical or mechanical engineering, kinesiology, rehabilitation sciences, or other related disciplines. All applicants should have a strong record of scholarly accomplishment that demonstrate research productivity and the ability to perform cutting edge research. Candidates seeking appointment at the associate or full professor level should have substantial research productivity and a history of grant support and academic service. *Please submit a curriculum vitae, cover letter, a two-page description of research accomplishments and plans, a statement on teaching, and the name and contact information for three references through the application portal* https://neu.peopleadmin.com/postings/57607 <https://na01.safelinks.protection.outlook.com/?url=https%3A%2F%2Furldefense…> . Review of applications will begin immediately and will continue until the position is filled. Applications should be submitted by November 29, 2018 to receive full considerations. Informal inquiries can be addressed to: Dr. Dagmar Sternad, Chair of the Search Committee (d.sternad(a)northeastern.edu) -- <http://www.hsantalucia.it/5x1000-sostieni-la-nostra-ricerca> *Rispetta l'ambiente: se non ti è necessario, non stampare questo messaggio - **Please consider the environment before printing this email.*

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Using spike train distances to identify the most discriminative neuronal subpopulation
by Thomas Kreuz Nov. 26, 2018

Nov. 26, 2018

Dear all, may I kindly draw your attention to our most recent paper which contains several new algorithms to address neuronal population coding using spike train distances: Satuvuori E, Mulansky M, Daffertshofer A, Kreuz T: Using spike train distances to identify the most discriminative neuronal subpopulation <https://www.sciencedirect.com/science/article/pii/S0165027018302747> JNeurosci Methods, 308, 354 [PDF <https://www.sciencedirect.com/science/article/pii/S0165027018302747>] and arXiv [PDF <https://arxiv.org/pdf/1805.10892.pdf>] (2018). For the abstract see below. This paper is part of the dissertation "Spike train distances and neuronal coding <http://dare.ubvu.vu.nl/bitstream/handle/1871/55855/abstract%20english.pdf?s…>" of my PhD student Eero Satuvuori whose full thesis can now be found here <http://dare.ubvu.vu.nl/bitstream/handle/1871/55855/abstract%20english.pdf?s…>. Besides some original parts and the paper cited above it also contains these recent works: Satuvuori E, Kreuz T: Which spike train distance is most suitable for distinguishing rate and temporal coding? JNeurosci Methods 299, 22 [PDF <https://ac.els-cdn.com/S0165027018300372/1-s2.0-S0165027018300372-main.pdf?…>] and arXiv [PDF <https://arxiv.org/pdf/1708.07508.pdf>] (2018). Kreuz T, Satuvuori E, Pofahl M, Mulansky M: Leaders and followers: Quantifying consistency in spatio-temporal propagation patterns New J. Phys., 19, 043028 [PDF <https://doi.org/10.1088/1367-2630/aa68c3>] and arXiv [PDF <https://arxiv.org/pdf/1610.07986v4.pdf>] (2017). Satuvuori E, Mulansky M, Bozanic N, Malvestio I, Zeldenrust F, Lenk K, Kreuz T: Measures of spike train synchrony for data with multiple time-scales JNeurosci Methods 287, 25 [PDF <https://doi.org/10.1016/j.jneumeth.2017.05.028>] and arXiv [PDF <https://arxiv.org/pdf/1702.05394.pdf>] (2017). All the best, Thomas Kreuz PS: Satuvuori E, Mulansky M, Daffertshofer A, Kreuz T: Using spike train distances to identify the most discriminative neuronal subpopulation <https://www.sciencedirect.com/science/article/pii/S0165027018302747> JNeurosci Methods, 308, 354 [PDF <https://www.sciencedirect.com/science/article/pii/S0165027018302747>] and arXiv [PDF <https://arxiv.org/pdf/1805.10892.pdf>] (2018). Abstract: Background Spike trains of multiple neurons can be analyzed following the summed population (SP) or the labeled line (LL) hypothesis. Responses to external stimuli are generated by a neuronal population as a whole or the individual neurons have encoding capacities of their own. The SPIKE-distance estimated either for a single, pooled spike train over a population or for each neuron separately can serve to quantify these responses. New method For the SP case we compare three algorithms that search for the most discriminative subpopulation over all stimulus pairs. For the LL case we introduce a new algorithm that combines neurons that individually separate different pairs of stimuli best. Results The best approach for SP is a brute force search over all possible subpopulations. However, it is only feasible for small populations. For more realistic settings, simulated annealing clearly outperforms gradient algorithms with only a limited increase in computational load. Our novel LL approach can handle very involved coding scenarios despite its computational ease. Comparison with existing methods Spike train distances have been extended to the analysis of neural populations interpolating between SP and LL coding. This includes parametrizing the importance of distinguishing spikes being fired in different neurons. Yet, these approaches only consider the population as a whole. The explicit focus on subpopulations render our algorithms complimentary. Conclusions The spectrum of encoding possibilities in neural populations is broad. The SP and LL cases are two extremes for which our algorithms provide correct identification results. -- Institute for complex systems, CNR Via Madonna del Piano 10 50119 Sesto Fiorentino (Italy) Tel: +39-349-0748506 Email: thomas.kreuz(a)cnr.it Webpage: http://www.fi.isc.cnr.it/users/thomas.kreuz/

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Frontiers Research Topic "Discrimination of Genuine and Posed Facial Expressions of Emotion"
by Jian Liu Nov. 26, 2018

Nov. 26, 2018

Call for Papers: Frontiers Research Topic "Discrimination of Genuine and Posed Facial Expressions of Emotion" More information: https://www.frontiersin.org/research-topics/9221/discrimination-of-genuine-… About this Research Topic Facial expressions demonstrate one emotional states in interpersonal situations. Evidence shows that part of the facial display reflects the emotional experience that is literally felt by the expresser. Interestingly, human beings are capable of identifying facial expressions of the felt emotions as a form of intentional deception to conduct social interaction and to stage displays that have the support of others. Staged or posed facial expressions implement an emotion that an expresser intends to convey, where genuine expressions are considered as the companion of spontaneous emotional expressions. The ability to differentiate genuine displays of emotional experience from posed ones is very important for dealing with day-to-day social interactions. Recent work has been conducted on whether or not people can distinguish between posed and genuine displays of emotion. In spite of few studies to investigate this ability, most prior research suggests that people have the ability to judge genuine and posed facial displays. Unfortunately, previous research has suffered from two major shortcomings: (1) the mixture of staged and genuine displays due to the lack of accounting for possible effects of intentional manipulation, and (2) struggling to consider dynamic aspects when people prepare facial stimuli for experimental investigation. This Research Topic encourages the submission of theoretical and experimental perspectives to broaden understanding of the importance of the discrimination of genuine and posed facial expressions of emotion. These may be new theoretical approaches, those from other disciplines of psychology not usually utilized within the discrimination of genuine and staged emotion identification or new theories and designs. We seek articles that present new hypotheses, concepts, experimental observations, and theories or models; demonstrate how theories adapted from other disciplines may be utilized for emotion identification or provide recommendations to improve current models or theories to enhance their capacity. We look for papers that may combine critical analysis of current models, synthesis of early empirical work by single- or multi-modality analysis (e.g. video, ECG, EEG, fMRI, and single cells in humans and/or animals), and explore the potential for their development applied to the context of emotion recognition. Submissions of systematic reviews and meta-analysis should discuss and promote comprehensive approaches to update and evolve concepts, hypotheses, and theories with potential applications in the community. Keywords: face expression, discrimination, genuine, posed, emotion Guest editors: Huiyu Zhou, Department of Informatics, University of Leicester, United Kingdom. Caroline Ling Li, School of Computing, University of Kent, United Kingdom. Shiguang Shan, Institute of Computing Technology, Chinese Academy of Sciences, China. Shuo Wang, Chemical and Biomedical Engineering, West Virginia University, United States. Jian Liu, Centre for Systems Neuroscience, University of Leicester, United Kingdom.

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Call for applications - 2019 Nengo Summer School
by Peter Blouw Nov. 23, 2018

Nov. 23, 2018

[All details about this school can be found online at https://www.nengo.ai/summerschool] The Centre for Theoretical Neuroscience at the University of Waterloo is excited to announce our 6th annual Nengo summer school on large-scale brain modelling and neuromorphic computing. This two-week school will teach participants to use the Nengo simulation package to build state-of-the-art cognitive and neural models to run both in simulation and on neuromorphic hardware. Summer school participants will be given on-site access to Loihi, Intel’s new neuromorphic research chip [1], and will learn to run high-level applications on Loihi using Nengo! More generally, Nengo provides users with a versatile and powerful environment for designing cognitive and neural systems, and has been used to build what is currently the world's largest functional brain model, Spaun [2], which includes spiking deep learning, reinforcement learning, adaptive motor control, and cognitive control networks. For a look at last year's summer school, check out this short video: https://www.youtube.com/watch?v=NwtYgBB2N6I We welcome applications from all interested graduate students, postdocs, professors, and industry professionals with a relevant background. [1] Davies, et al. (2018). Loihi: A neuromorphic manycore processor with on-chip learning. IEEE Micro. Vol. 38 no. 1 pp. 82-99. [ https://ieeexplore.ieee.org/document/8259423] [2] Eliasmith, C., Stewart T. C., Choo X., Bekolay T., DeWolf T., Tang Y., Rasmussen, D. (2012). A large-scale model of the functioning brain. Science. Vol. 338 no. 6111 pp. 1202-1205. DOI: 10.1126/science.1225266. [ http://compneuro.uwaterloo.ca/files/publications/eliasmith.2012.pdf] ***Application Deadline: February 15, 2019*** Format: A combination of tutorials and project-based work. Participants are encouraged to bring their own ideas for projects, which may focus on testing hypotheses, modeling neural or cognitive data, implementing specific behavioural functions with neurons, expanding past models, or providing a proof-of-concept of various neural mechanisms. Hands-on tutorials, work on individual or group projects, and talks from invited faculty members will make up the bulk of day-to-day activities. A project demonstration event will be held on the last day of the school, with prizes for strong projects! Participants will have the opportunity to learn how to: - interface Nengo with neuromorphic hardware (e.g. Loihi, SpiNNaker) - build perceptual, motor, and cognitive models using spiking neurons - model anatomical, electrophysiological, cognitive, and behavioural data - use a variety of single cell models within a large-scale model - integrate machine learning methods into biologically oriented models - interface Nengo with cameras and robotic systems - implement modern nonlinear control methods in neural models - and much more… Date and Location: June 9th to June 21st, 2019 at the University of Waterloo, Ontario, Canada. Applications: Please visit http://www.nengo.ai/summerschool, where you can find more information regarding costs, travel, lodging, along with an application form listing required materials. If you have any questions about the school or the application process, please contact Peter Blouw (peter.blouw(a)appliedbrainresearch.com) The school is also partly supported by ONR and ABR, Inc. We look forward to hearing from you!

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Postdoc position at The Krembil Centre for Neuroinformatics
by Leon French Nov. 21, 2018

Nov. 21, 2018

The Computational Neurobiology Laboratory at The Krembil Centre for Neuroinformatics seeks a postdoctoral fellow to join our efforts to understand brain disorders. We focus on mining datasets of connectivity, gene expression, and epigenetics across the genome and the brain. We employ multifaceted approaches that gain information by using data that crosses scales, modalities, and species. We seek one postdoctoral fellow interested in bioinformatics and neuroscience. The primary project will be to join large transcriptomic resources with the polygenic signal of major depression to gain insight into the disorder. In addition to this project, there would be opportunities to pursue other research interests. Some of our frequently used keywords give a good description of our work: neuroinformatics, molecular neuroanatomy, genetics, transcriptomics, machine learning, text mining, neuroimaging, software development, and connectomics. The ideal candidate should have a PhD in computational biology, bioinformatics, computer science or related field with extensive knowledge in genome wide data integration. Significant interest in neuroscience and experience working with large datasets are requested. Familiarity with The Library of Integrative Network-based Cellular Signatures (LINCS) is a plus. Preferred qualifications and experience: - Excellent written and verbal communication skills - Extensive experience in programming and scripting (e.g., R or Python) - Expertise in genomics, bioinformatics, computational biology, neuroscience or related areas - Experience in analyzing, visualizing and integrating large-scale biological data - Contributions to public software projects Writing manuscripts and applying for independent grants and fellowships will be strongly encouraged. Highly motivated individuals (Ph.D. and/or M.D.) should submit a curriculum vitae, names of 3 references and a cover letter explaining their interest, and a brief description of research experience to leonfrench+recruit at gmail.com. You will support a healthy workplace that embraces diversity, encourages teamwork and complies with all applicable and regulatory requirements. This position will be located at 250 College Street, Toronto.

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2 years postdoc position in reinforcement learning-based modeling of animal behavior
by david robbe Nov. 21, 2018

Nov. 21, 2018

Dear Colleagues, Please find below an announcement for a postdoc position in Marseille (France) to develop reinforcement learning-based models of animal behavior. The Turing Centre for Living Systems in Marseille seeks applicants for a postdoc position in computational neuroscience/robotics under the joint supervision of David Robbe and Christophe Eloy. The initial appointment will be for 2 years. The goal of this project is to understand, at an algorithmic level, how animals learn to develop adaptive behavior by trial-and-error interaction with their environment. We propose an interdisciplinary approach combining behavioral experiments in rats and the development of an "artificial" agent facing challenges similar to those experienced by the rats. The experimental data (already available) show that rats challenged in a time estimation task converged progressively toward a conserved embodied strategy (Rueda-Orozco and Robbe, Nature Neuroscience, 2015). Key determinants of that strategy have been isolated experimentally, by altering task rules and environment and quantifying how these alterations affect animal performance. Learning theoretical models will be based on reinforcement learning and more recent developments coming from artificial intelligence (deep learning). The main task of the project will be to develop computational model and therefore we expect the candidates to have a solid background in the gerenal field of machine learning. The successful applicant will work in close collaboration with experimentalists and robotic engineers. We are therefore looking for an enthusiastic applicant with excellent communication skills and a track record in interdisciplinary collaborative environments Deadline for application: 1st of December 2018 (late application will be considered until the end of the year) More information and application.<http://centuri-livingsystems.org/pdp2018-11/>http://centuri-livingsystems.org/pdp2018-11/ -- David Robbe, PhD Neural Bases of Sensorimotor learning Institut de Neurobiologie de la Méditerranée (INMED) INSERM-UMR1249 163, avenue de Luminy. BP13 13273 Marseille Cedex 9 France Tel: +33 4 91 82 81 99 Fax: +33 4 91 82 81 05 Team Web Page <http://www.inmed.fr/en/en-avenir-dynamiques-neuronales-et-fonctions-des-gan…> /"It is disturbingly common for studies to include behavior as simply a hasty add-on in papers that are otherwise crammed full of multiple techniques, types of results, and even species. It is as if every paper needs to be a methodological decathlon in order to be considered important."/ Krakauer et al., Neuron 2017 <https://www.cell.com/neuron/abstract/S0896-6273(16)31040-6>

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New AFOSR Cognitive & Computational Neuroscience research funding portfolio
by GREENWALD, HAL S DR-04 USAF AFMC AFOSR/RTA Nov. 19, 2018

Nov. 19, 2018

Dear Colleagues, Please check out AFOSR's new research funding portfolio in Cognitive and Computational Neuroscience! The Cognitive and Computational Neuroscience program funds high-risk, high-potential basic research that uses experimental and computational modeling techniques from systems neuroscience, cognitive neuroscience, computational/theoretical neuroscience, cognitive science, and cognitive psychology to understand the neural mechanisms responsible for perception, cognition, and behavior. The program also supports brain-inspired algorithm and hardware development provided these are useful for testing proposed neuroscience theories and/or enabling novel capabilities in computing, artificial intelligence, or autonomous systems. The Broad Agency Announcement is posted at https://www.grants.gov/web/grants/view-opportunity.html?oppId=305996 (see file FA9550-18-S-0003 Amendment 002.pdf) Awards under this BAA are not limited to US researchers. Although the BAA remains open year round, to be considered for FY19 funding, full proposals should be submitted via grants.gov no later than mid-February. Emailed pre-proposals in the form of white papers (approximately 3-5 pages, excluding references) describing specific research questions and approaches are encouraged. Regards, Hal Greenwald Hal S. Greenwald, Ph.D. Program Officer, Cognitive & Computational Neuroscience Air Force Office of Scientific Research (AFOSR/RTA) 875 N. Randolph St. Arlington, VA 22203-1768 (703) 588-8441 neuroscience(a)us.af.mil

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PhD studentship, University of Exeter
by Goodfellow, Marc Nov. 19, 2018

Nov. 19, 2018

A fully funded studentship is available to work with Dr. Marc Goodfellow (University of Exeter, UK) and Prof. George Augustine (NTU, Singapore). The deadline for applications is 31st January 2019. Healthy brain function is mediated by the coordination of neuronal activity - both locally and across different brain regions - giving rise to large-scale brain dynamics. These dynamics are measured using a variety of techniques, for example magneto-/electro-encephalography or functional MRI in humans, or by fluorescence-based imaging of voltage- or calcium-sensitive indicators in animal models in vivo. Uncovering the nature and mechanisms of large-scale brain dynamics at rest, or during sensory processing, remains a fundamental challenge in neuroscience. In addition to basic insight, improving our understanding of healthy brain dynamics will help us elucidate reasons why abnormal dynamics occur, for example in neurological or neuropsychiatric disorders. This studentship will develop a novel program of interdisciplinary research across in vivo (mouse) experimentation and mathematical modelling. The overall aim is to construct and validate mathematical models of large-scale brain dynamics that are able to explain the spontaneous activity of the rodent brain in vivo. The student will train in optogenetic technologies and in vivo imaging, as well as mathematical model development, multi-variate time series analysis and parameter fitting tools, thus placing them at the forefront of interdisciplinary neuroscience. In a first step, targeted optogenetic stimuli will be combined with voltage sensitive dye imaging in awake mice to probe the response of brain tissue to excitatory and inhibitory afferent stimuli. Neural mass models will be fit to these data, using machine learning approaches (for example random forests). This information will be compiled into a predictive model of cortical dynamics and tested against experimental recordings of spontaneous activity. The studentship is part of a joint program between The University of Exeter (UoE) and Nanyang Technological University (NTU), Singapore. They are offering six fully funded postgraduate studentships to undertake collaborative research projects at the two institutions, leading to PhD degrees (split-site) to be conferred either by the UoE or NTU. Students pursuing these postgraduate research projects will benefit from the unique opportunity to conduct their research at both institutions. Students will be registered at one or other institution, where they will be based for the majority of their time, but will spend at least 12 and not more than 18 months at the partner institution over the duration of the programme. The frequency and length of stays at each institution will be agreed with successful candidates prior to offers being made. All six projects are advertised concurrently at both institutions and three will be allocated to each institution after the deadline has passed, based on a collaborative decision made between the UoE and NTU. The final decision on the successful applicant for each project will be made by the institution hosting the project. Project allocation will be based on the applicant's best fit to a project, following a review of applications submitted to each institution. Applications to undertake the projects at the UoE and NTU are open to all nationalities. The programme start dates are August 2019 for NTU and September 2019 for UoE The home institution will determine the regulations that will apply to the successful applicant. The student's main supervisor will be based at the home institution. For further information and to register interest, please contact Dr. Marc Goodfellow (m.goodfellow(a)exeter.ac.uk) To apply and for further details, please see http://www.exeter.ac.uk/studying/funding/award/?id=3058

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Ph.D. positions in Math Biology and Computational Neuroscience at NJIT
by Victor Matveev Nov. 17, 2018

Nov. 17, 2018

Dear all, The Department of Mathematical Sciences at New Jersey Institute of Technology (NJIT) is inviting candidates to apply to one of our doctoral program tracks: (1) Applied Mathematics or (2) Applied Probability & Statistics. The Department's research focus spans Mathematical Biology and Computational Neuroscience, Scientific Computing, Fluid Dynamics, Materials Science, Wave Propagation, Applied Analysis, Applied Probability & Statistics, including Biostatistics. Teaching and research assistantships are available, and include a tuition waiver and a competitive stipend. Application target date is December 15, 2018 but ongoing review will continue until all available positions are filled. To apply, please visit our homepage: https://www.njit.edu/graduatestudies/department-mathematical-sciences/?utm_… For more information, please email us (math(a)njit.edu, CC to:rmoore@njit.edu, matveev(a)njit.edu) PhD Program advertisement flyer is available at http://web.njit.edu/~matveev/NJIT_DMS_PhD_flyer.pdf Sincerely, -- Admissions Committee, Department of Mathematical Sciences, NJIT -- _____________________________________________ Victor Matveev, Professor Applied Math, Biophysics, Neuroscience Department of Mathematical Sciences Graduate Faculty, Dept of Biological Sciences New Jersey Institute of Technology Newark, NJ 07102-1982 Office: Cullimore Hall 616 E-mail: matveev(a)njit.edu http://web.njit.edu/~matveev/

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Threshold Networks Workshop - First announcement
by Stephen Coombes Nov. 16, 2018

Nov. 16, 2018

First announcement Threshold Networks July 22 - 24, 2019 Nottingham, UK https://www.nottingham.ac.uk/conference/fac-sci/maths-sci/threshold-network… This workshop will bring together a community of people interested in both networks and dynamics, with an eye to both mathematical tractability and applications to biology, engineering, physics, and the social sciences. The emphasis will be on ‘thresholds’ in their broadest sense as exemplified by node dynamics or interactions that are described by simple, yet possibly non-smooth or discontinuous switch-like processes. The workshop will cover both theory and applications. The meeting will have no parallel sessions, and it is expected to involve around 60 participants (with 12 main speakers) and contributed poster presentations. Speakers: Alex Arenas, Universidad Rovira i Virgili, Spain Mario Di Bernardo, University of Bristol, UK Ginestra Bianconi, Queen Mary University of London, UK Des Higham, University of Strathclyde, UK Renaud Lambiotte, University of Oxford, UK Naoki Masuda, University of Bristol, UK Peter Mucha, University of North Carolina, USA Sarah Muldoon, University at Buffalo, USA Yamir Moreno, University of Zaragoza, Spain Important dates Registration deadline: 1st June 2019 Poster abstract submission deadline: 12th April 2019. Notification of acceptance: 1st May 2019 The registration fee for the conference is 100.00 GBP. A “Tutorial Day” (covering key concepts in dynamical systems and network science) will also take place prior to the meeting (on July 21). Some financial assistance may be available to assist graduate students who attend both the training workshop and the conference. Further details of this meeting and how to register may be found at https://www.nottingham.ac.uk/conference/fac-sci/maths-sci/threshold-network… Scientific Organisers Yi Ming Lai, Rüdiger Thul, and Stephen Coombes, University of Nottingham Mason A. Porter, UCLA Enquiries should be sent to: ThresholdNetworks2019(a)nottingham.ac.uk<mailto:ThresholdNetworks2019@nottingham.ac.uk> ------------------------------------------------------- Stephen Coombes Professor of Applied Mathematics School of Mathematical Sciences Nottingham, UK Tel: 0115 846 7836 http://www.maths.nott.ac.uk/~sc/ ------------------------------------------------------- This message and any attachment are intended solely for the addressee and may contain confidential information. If you have received this message in error, please contact the sender and delete the email and attachment. Any views or opinions expressed by the author of this email do not necessarily reflect the views of the University of Nottingham. Email communications with the University of Nottingham may be monitored where permitted by law.

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Multiple Postdocs available in the Neurobiology of Language
by Woolnough, Oscar Nov. 16, 2018

Nov. 16, 2018

POSTDOCTORAL RESEARCH POSITIONS Multiple Postdoctoral research positions are available in the Tandon Lab at The University of Texas in Houston as part of the newly formed Texas Epilepsy Neurotechnologies and Neuroinformatics (TENN) Institute. Positions are funded either via multi year Institute funding or by NIH funds (an R01 and a U01). The lab uses multimodal approaches – fMRI, lesional analysis following epilepsy surgery, intracranial recordings and direct stimulation to create validate network level representations of language. Lab Collaborators include Greg Hickok (UCI), Stanislas Dehaene (NeuroSpin), Nathan Crone (JHU), Simon Fisher Baum (Rice) and Xaq Pitkow (Rice-Baylor); the post-doc will benefit from a close interaction with these experts in the fields of reading, semantics, speech production and computational neuroscience. The selected individual must have a Ph.D. in one or more of the following: neuroscience, psychology, cognitive science, mathematics, electrical engineering or computer science. Previous experience in neural time series data analysis, functional imaging studies of language, or studies of speech production are desirable – but not crucial. They must possess the ability to independently code in any or all of the following: MATLAB, R or python. They are expected to be highly motivated, team players with a passion to study cognitive processes using any or all of the various modalities available in the lab - imaging, direct recordings and closed-loop cortical stimulation in humans. Given the multiple unpredictable variables and privacy issues around data collection in human patients, the individual must possess high ethical and professional standards and be adaptable. A strong publication record and excellent academic credentials are highly desirable. CONTACT: Nitin.Tandon(a)uth.tmc.edu<mailto:Nitin.Tandon@uth.tmc.edu> Eliana.Klier(a)uth.tmc.edu<mailto:Eliana.Klier@uth.tmc.edu> More information @ www.tandonlab.org

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PhD fellowship on analysis/large-scale modelling of cross-frequency coupling and stimulation
by BATTAGLIA Demian Nov. 16, 2018

Nov. 16, 2018

Applications are invited for a: PhD fellowship at Aix-Marseille University (AMU, southern France) under the mentoring of Dr. Demian Battaglia (Institute for Systems Neuroscience - INS). This three-years fellowship is funded by the ANR grant (Agence National de la Recherche) “ERMUNDY (Exact Reduction of Multiscale Neural Dynamics)”. In the context of this project we will develop computational multi-scale models of cortical oscillatory dynamics (multiple frequencies, cross-frequency coupling…) and of its control via stimulation. The used models (from the regional to the whole-brain level) will be constrained by realistic information on the phase response properties of actual neural populations, which will be inferred from both extra-cranial (TMS) and intra-cranial (sEEG) stimulation data, acquired in house at AMU. Interactions with other researchers will take place as well, including experimentalists located in AMU, and theorists at Cergy-Pontoise University (Alessandro Torcini) and Ecole Normale Supérieure in Paris (Boris Gutkin). The PhD fellow will participate to both experimental data analysis (extraction of Phase Response Curves, functional connectivity analyses…) and model design and simulation. The successful candidate will integrate the Theoretical Neuroscience Group at the Institute for Systems Neuroscience (INS), located on the same campus of the Timone University hospital (AP-HM). The integrative and clinical neuroscience community in Marseille is among the most lively in Europe and Marseille is a vibrating city, with wonderful natural surroundings and home to the largest French-speaking university in the world, with an emphasis on interdisciplinary studies. Salary (~1.4k euros net, after all taxes and full social security coverage) is defined according to French national guidelines and cannot be negotiated. Interested candidates should send a cv, a brief description of qualifications and research interests and the name of one or two reference contacts to: Demian Battaglia demian.battaglia(a)univ-amu.fr Feel free to inquire for further information. Applications from under-represented categories in STEM sciences are welcome and supported.

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PhD position at HU Berlin (Physics Dep.) available
by Benjamin Lindner Nov. 16, 2018

Nov. 16, 2018

*Calcium spiking with cumulative refractoriness - statistics of the fluctuations and implications for Calcium signaling** *We are looking for a PhD candidate to theoretically explore models of noisy spike-generating cellular signalling systems for which the intracellular Calcium dynamics is a prominent example. Methods will be developed within the frameworks of the theory of stochastic processes, statistical physics and nonlinear dynamics. The project is a collaboration between the research groups of Martin Falcke (Max-Delbrueck Center for Molecular Medicine Berlin and Humboldt University Berlin) and Benjamin Lindner (Bernstein Center for Computational Neuroscience Berlin and Humboldt University Berlin) and the PhD students of both groups are expected to closely collaborate. The successful candidate should have a degree in physics (a background in physical biology is desirable but not obligatory), expertise in analytical calculations, programming skills (C++ or C, Python, LaTeX, Linux), and excellent command of the English language, good communication skills, and team spirit. Funding is provided for three years, starting at the latest February 1, 2019. For details on the doctoral examination process at the Physics Department of Humboldt University Berlin, see https://fakultaeten.hu-berlin.de/en/mnf/wisskar/promotionen/index_html?set_…. Applications, including a letter of motivation, a CV, and a list of three potential referees should be sent by email to   me benjamin.lindner(a)physik.hu-berlin.de  (cc to nikola.schrenk(a)bccn-berlin.de)  The deadline for applications is December 31st 2018, however, later applications might also be considered. HU is seeking to increase the proportion of women in research and teaching, and specifically encourages qualified female scholars to apply. Severely disabled applicants with equivalent qualifications will be given preferential consideration. People with an immigration background are specifically encouraged to apply. Since we will not return your documents, please submit copies in the application only. Kind regards, Benjamin Lindner -------------------------------------------------------------------------------------------------------------------- Benjamin Lindner Professor for Theory of Complex Systems and Neurophysics Bernstein Center for Computational Neuroscience Berlin Philippstr. 13, Haus 2, 10115 Berlin Room: 1.17, phone: 0049(0)302093 6336 Department of Physics Humboldt University Berlin Newtonstr. 15 12489 Berlin Room: 3.408, phone: 0049(0)302093 7934 http://people.physik.hu-berlin.de/~lindner/index.html --------------------------------------------------------------------------------------------------------------------

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Associate Professor in Mathematical Imaging
by Stephen Coombes Nov. 14, 2018

Nov. 14, 2018

Dear all, As part of the growth of activity in Precision Imaging at Nottingham there is an opening at Associate Professor level in the area of Mathematical Imaging. The post-holder will undertake original research of international excellence in Mathematical Imaging or closely related areas including Neuroimaging and Computational Neuroscience, complementing and enhancing the current activity of the Mathematical Medicine and Biology group (https://www.nottingham.ac.uk/cmmb/index.aspx) and the University Beacon in Precision Imaging (https://www.nottingham.ac.uk/research/beacons-of-excellence/precision-imagi…) For information about how to apply please visit https://www.nottingham.ac.uk/jobs/currentvacancies/ref/MED1511 Best regards, Steve ------------------------------------------------------- Stephen Coombes Professor of Applied Mathematics School of Mathematical Sciences Nottingham, UK Tel: 0115 846 7836 http://www.maths.nott.ac.uk/~sc/ ------------------------------------------------------- This message and any attachment are intended solely for the addressee and may contain confidential information. If you have received this message in error, please contact the sender and delete the email and attachment. Any views or opinions expressed by the author of this email do not necessarily reflect the views of the University of Nottingham. Email communications with the University of Nottingham may be monitored where permitted by law.

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XI. Dubrovnik Conference on Cognitive Science - Computational Rationality
by Gergo Orban Nov. 13, 2018

Nov. 13, 2018

Dear All, We are happy to announce the XI. Dubrovnik Conference on Cognitive Science, which is devoted to the topic of Computational Rationality. The conference will take place between 23-25 May 2019 in Dubrovnik, Croatia. Invited speakers are: Ulrike Hahn (Birkbeck, University of London, UK) Quentin Huys (ETH Zürich, Switzerland) Julian Jara-Ettinger (Yale University, USA) Mate Lengyel (University of Cambridge, Central European University) Azzurra Ruggeri (Max Planck Institute for Human Development, Berlin, Germany) Laura Schultz (MIT, USA) For more information please visit: http://www.cecog.eu/ducog/page_invitation.php <http://www.cecog.eu/ducog/page_invitation.php> or email us: ducog(a)cogsci.bme.hu <mailto:ducog@cogsci.bme.hu> On behalf of the organisers, Oana Stanciu Gergő Orbán

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Postdoc positions in computational and multimodal neuroimaging
by Laura Lewis Nov. 13, 2018

Nov. 13, 2018

Postdoc positions at Boston University and Harvard Medical School/MGH POSITION 1: We have openings for postdoctoral associates to lead multimodal neuroimaging studies of brain function in Laura Lewis' lab at Boston University, aiming to advance computational and systems neuroscience of the human brain. These positions offer the opportunity to develop computational neuroimaging approaches using state-of-the-art MR techniques, and study the neural basis and cognitive consequences of sleep, wake, arousal, and attentional states. We use fast fMRI, multimodal imaging (e.g. EEG-fMRI, PET-fMRI), computational modeling, ultra-high field (7 Tesla) imaging, and other multimodal approaches to measure and analyze brain function across diverse states. The lab is a fast-paced and interdisciplinary environment that supports its members in achieving their long-term research and career goals, and has strong collaborations throughout the Boston-area computational neuroscience and neuroimaging communities. POSITION 2: Postdoctoral Research Fellow in advanced functional MRI based at the Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital (MGH) and Harvard Medical School. Our research aims to enable new kinds of analyses of brain activity through advanced neuroimaging and signal processing approaches. Working with Drs. Jonathan Polimeni and Laura Lewis, the fellow will study the neural and vascular origins of fast fMRI signals and test the upper limits of the speed and sensitivity of fMRI. The postdoctoral fellow will use advanced accelerated fMRI methods and ultra-high field imaging (7T) to study and model the dynamics of neural activation at fast timescales and across cortical layers. Multimodal imaging (including ASL, CBV, and simultaneous EEG/fMRI) and computational models of physiological dynamics may also be used, to ultimately track fast and local neural dynamics using accelerated fMRI. The Martinos Center is home to state-of-the-art imaging facilities and technological expertise in neuroimaging. The center houses over 200 faculty and postdoc members, conducting diverse neuroimaging research with great potential for collaborations and career development. BU and MGH are equal opportunity employers. Position is well suited for a highly motivated researcher with a desire to begin an independent career related to advanced fMRI and/or neuroscience. A Ph.D. in engineering, physics, neuroscience, psychology, or related field, is required. A background in neuroimaging techniques and/or neurophysiology is an asset but not required. Strong analysis skills and independent motivation and creativity are essential. TO APPLY: Interested applicants should send a cover letter describing research experience, interests, and future goals, as well as a CV and contact information for three references, to ldlewis(a)bu.edu For more information see: http://www.lewisneurolab.org/positions

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Postdoc in auditory thalamocortical system modeling & data analysis
by Neymotin, Samuel (NKI) Nov. 13, 2018

Nov. 13, 2018

A computational neuroscience postdoctoral position is available at the Nathan Kline Institute for Psychiatric Research under the auspices of a NIH R01 (MPI: Peter Lakatos, Sam Neymotin). The aim of our project is to develop/utilize computer models of the auditory thalamocortical system to investigate mechanisms and functions of neuronal oscillatory patterns observed in the auditory system in the electrophysiological recordings from Dr. Lakatos' group. The broad goal is to develop a biologically-realistic data-driven computer model of the thalamocortical auditory system that is able to support critical auditory information processing features, with special emphasis on neuronal oscillations. The combined in vivo and in silico results of our project will pave the way for model-driven neuromodulation, offering precise predictions on how to efficiently control biological circuits. Besides modeling, our group also focuses heavily on developing and applying novel signal processing techniques for the analysis of electrophysiological data on multiple spatial scales, from single neurons to ECoG recordings. Applicants should have a strong background in: computer programming, with demonstrated proficiency in Python and Matlab, analysis of electrophysiological data, development of signal processing methods for neural data, detailed computational modeling of neurons/neuronal circuits using NEURON with Python. The job will be based at the Nathan Kline Institute (www.nki.rfmh.org<http://www.nki.rfmh.org> ~1 hour north of NYC), but some telecommuting will be allowed. Applicants should contact Sam Neymotin by email (samuel.neymotin(a)nki.rfmh.org<mailto:samuel.neymotin@nki.rfmh.org>) with a CV and cover letter. The Nathan Kline Institute is an equal opportunity employer. ________________________________ IMPORTANT NOTICE: This e-mail is meant only for the use of the intended recipient. It may contain confidential information which is legally privileged or otherwise protected by law. If you received this e-mail in error or from someone who was not authorized to send it to you, you are strictly prohibited from reviewing, using, disseminating, distributing or copying the e-mail. PLEASE NOTIFY US IMMEDIATELY OF THE ERROR BY RETURN E-MAIL AND DELETE THIS MESSAGE FROM YOUR SYSTEM. Thank you for your cooperation.

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Post-doc position in neuroimaging and computational neuroscience in Bordeaux, France
by Alexandre Zenon Nov. 13, 2018

Nov. 13, 2018

Post-doctoral position in neuroimaging Applications are invited for a Research Fellow in the Aquitaine Institute for Cognitive and Integrative Neuroscience, Bordeaux, France. The successful applicant will pursue research projects on the neurobiological and computational underpinnings of the cost of cognition. These projects will combine neuroimaging and computational approaches. The post is available from early 2019 and is funded for two years by a grant from the Agence Nationale de la Recherche. Applicants must have, or be close to obtaining, a PhD in neuroscience, psychology, or a related area. Experience in conducting neuroscience research and in programming (Matlab and/or Python) is required. Experience in conducting neuroimaging research and in building computational models of behavior will be very appreciated. To apply for the vacancy, or for more information, please contact Dr. Alexandre Zénon (email: alexandre.zenon(a)u-bordeaux.fr ). Applications should include CV, motivation letter and contact information for 3 references.

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PhD positions in computational neuroscience, University of Edinburgh
by Matthias Hennig Nov. 13, 2018

Nov. 13, 2018

3 YEAR PhD IN COMPUTATIONAL NEUROSCIENCE, UNIVERSITY OF EDINBURGH. We invite applications for our PhD programme in COMPUTATIONAL NEUROSCIENCE at the Institute for Adaptive and Neural Computation at the University of Edinburgh. The studentships are ideal for students who want to apply their computational and analytical skills to problems in neuroscience and related fields. The following supervisors have openings: Matthias Hennig: Neural network models; homeostasis and development; visual and auditory neuroscience; analysis of large-scale recordings. Arno Onken: Neural coding; machine learning for neural data analysis; multi-modal and multi-scale analysis. Peggy Seriès: Bayesian approaches to cognition and perception; computational psychiatry. The PhD project can be done in collaboration with one of the many affiliated departments and institutes. Edinburgh has been voted as 'best place to live in Britain', and has many exciting cultural and student activities. Students with a strong background in either computer science, mathematics, physics or engineering are particularly welcome to apply. Motivated students with other backgrounds will also be considered. To apply, visit https://www.ed.ac.uk/studying/postgraduate/degrees/index.php?r=site/view&ed… Applications completed by 16. January 2019 will receive full consideration. -- The University of Edinburgh is a charitable body, registered in Scotland, with registration number SC005336.

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PhD in cortical memory storage at the University of Edinburgh
by Matthias Hennig Nov. 12, 2018

Nov. 12, 2018

Applications are invited for an EASTBIO-funded PhD position in the labs of Dr. Gulsen Surmeli and Dr. Matthias Hennig. This is an excellent training opportunity for a highly motivated individual to learn both the use of modern in vivo functional neuron imaging technologies and the applications computational methods to address fundamental questions in neuronal computation. Objectives: Cognitive abilities are a result of coordinated activity of billions of neurons. Recent advances in neuroscience research now enables monitoring activity of thousands of neurons during cognitive tasks. Decoding these large ensemble codes enable unprecedented insight into the inner workings of the brain. This project aims to investigate neural ensemble coding of cortical memory networks. In this project, we will investigate the encoding of memories in cortical networks. In Dr. Surmeli’s lab, a miniaturized head attached fluorescent microscope (miniscope) will be used to perform cellular resolution imaging of activity of neuronal ensembles in freely moving mice during memory tasks. Combined with advanced genetic techniques this method allows tracking activity of thousands of neurons during memory formation and recall. Since memory engrams are typically sparse and highly distributed over many neurons, tracking the acquisition of new memories will require advanced analysis methods, which will be developed in collaboration with the second supervisor based in the School of Informatics. Moreover, the results will enable constructing new models of short and long-term memory acquisition that can advance artificial neural networks used in machine learning applications. For conditions of applying and to apply please refer to: https://www.findaphd.com/search/ProjectDetails.aspx?PJID=100855 Download application and reference forms via: https://www.ed.ac.uk/roslin/postgraduate/bbsrc-eastbio-dtp Lab website/Online Profile https://www.ed.ac.uk/discovery-brain-sciences/our-staff/research-groups/dr-… http://homepages.inf.ed.ac.uk/mhennig/ -- The University of Edinburgh is a charitable body, registered in Scotland, with registration number SC005336.

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Doctoral studies in Computational/Theoretical Neuroscience at NYU
by Eero P Simoncelli Nov. 12, 2018

Nov. 12, 2018

New York University is home to a thriving interdisciplinary community of researchers using computational and theoretical approaches in neuroscience. We are interested in exceptional PhD candidates with strong quantitative training (e.g., physics, mathematics, engineering) coupled with a clear interest in scientific study of the brain. A listing of faculty, sorted by their primary departmental affiliation, is given below. Doctoral programs are flexible, allowing students to pursue research across departmental boundaries. Nevertheless, admissions are handled separately by each department, and students interested in pursuing graduate studies should submit an application to the program that best fits their goals and interests. Center for Neural Science (CNS), Graduate School of Arts & Sciences (deadline: 1 December) [http://neuroscience.nyu.edu/graduate-programs/, and http://www.cns.nyu.edu/doctoral/] * Andre A. Fenton - Molecular, neural, behavioral, and computational aspects of memory. * Paul W. Glimcher - Decision-making in humans and animals. Neuroeconomics. * Roozbeh Kiani - Vision and decision-making. * Wei Ji Ma (also in Psychology) - Perception, working memory, and decision-making. * Tony Movshon - Vision and visual development. * Bijan Pesaran - Neuronal dynamics and decision-making. * Alex Reyes - Functional interactions of neurons in a network. * John Rinzel (also in Mathematics) - Biophysical mechanisms and theory of neural computation. * Cristina Savin (also in the Center for Data Science) - Computational models of learning and memory, machine learning. * Robert Shapley - Visual physiology and perception. * Eero Simoncelli - Computational vision and audition. * Xiao-Jing Wang - Computational neuroscience, decision-making and working memory, neural circuits. Neuroscience Institute, School of Medicine (deadline: 1 December) [http://neuroscience.nyu.edu/graduate-programs/, and https://med.nyu.edu/departments-institutes/neuroscience/] * Gyorgy Buzsaki - Rhythms in neural networks. * Dmitri Chklovskii (also in the Simons Foundation) - Neural computation and connectomics. * Dmitry Rinberg - Sensory information processing in the behaving animal. * Mario Svirsky - Auditory neural prostheses; experimental/computational studies of speech production/perception. Psychology, Cognition & Perception program (deadline: 1 December) [http://as.nyu.edu/psychology/graduate/phd-cognition-perception.html] * Todd Gureckis - Memory, learning, and decision processes. * David Heeger (also in CNS) - Computational neuroscience, vision, attention. * Brendan Lake (also in the Center for Data Science) - Computational modeling of cognition. * Michael Landy - Computational approaches to vision. * Laurence Maloney - Mathematical approaches to psychology and neuroscience. * Gary Marcus - Origins of the human mind. * Denis Pelli - Visual object recognition. * Jonathan Winawer - Visual perception and memory. Mathematics (deadline: 18 December) [http://math.nyu.edu/degree/phd/] * David McLaughlin - Nonlinear wave equations, computational visual neuroscience. * Aaditya Rangan - Computational neurobiology, numerical analysis. * Charles Peskin - Mathematical biology. * Michael Shelley - Modeling and large-scale computation, computational visual neuroscience. * Daniel Tranchina - Information processing in the retina. * Lai-Sang Young - Dynamical systems, statistical physics, computational modeling and theoretical neuroscience. Center for Data Science (deadline: 12 December) [https://cds.nyu.edu/academics/phd-in-data-science/] * Joan Bruna (also in Computer Science) - Machine learning, signal/image processing. * Kyungyun Cho (also in Computer Science) - Machine learning, natural language processing. * Carlos Fernandez-Granda (also in Mathematics) - Optimization methods for medical imaging, neuroscience, computer vision. * Brenden Lake - Computational modeling of cognition, deep learning. Physics (deadline: 18 December) [http://physics.as.nyu.edu/page/graduate] * Marc Gershow - Perception, decision-making, and learning in neural circuits. Computer Science (deadline: 12 December) [http://www.cs.nyu.edu/home/phd/] * Davi Geiger - Computational vision and learning. * Yann LeCun - Machine learning, computer vision, robotics, computational neuroscience. Economics (deadline: 18 December) [http://as.nyu.edu/econ/degree-programs/phd.html] * Andrew Caplin - Economic theory, neurobiology of decision. * Andrew Schotter - Experimental economics, game theory, neurobiology of decision.

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REMINDER: Special Issue Operations Research for Neuroscience II
by Ruben A. Tikidji-Hamburyan Nov. 11, 2018

Nov. 11, 2018

Dear Colleagues, Just a friendly reminder: Deadline for paper submission is in a few weeks. December 1, 2018 We strongly encourage colleagues who are using modern operations research methods, to consider submitting a manuscript. We also invite manuscripts which propose further developments of modern formal theories (such as the free-energy principle, integrated information, Bayesian learning, etc). Please find the CfP attached as a pdf file or as plain text below. Best regards, Ruben Tikidji-Hamburyan. ____________________________________________________ ― Call for Papers ― Annals of Operations Research Special Issue Operations Research for Neuroscience II ____________________________________________________ After the positive and encouraging response from the scientific and wider community to the special issue Operations Research for Neuroscience, the journal Annals of OperationsResearch (Springer) now invites submissions of papers to a second special issue on the same subject, called Operations Research for Neuroscience II. Neuroscience, a multidisciplinary science, is concerned with the study of the structure and functions of the nervous system. It comprises aspects of physiology, cellular and molecular biology, as well as behavioral and cognitive science. Recent technological and theoretical advances offer promising opportunities for better understanding of the nervous system at the quantitative level. New optogenetic, in vitro and in vivo multielectrode recording, neuroimaging, brain imaging, and other modern techniques provide high-quality data that can be used in elucidating the fundamental mechanisms of information processing in the nervous system. The rapidly growing pool of experimental data has triggered the development of new mathematical models that can provide new insights into the functioning of the nervous system at various scales, ranging from that of molecular biology to that of the organizational principles of behavior and cognition. Sophisticated analyses of intracellular signaling or dynamics in heterogeneous neural networks, conditional behavior, or connections of brain regions in decision-making lead to theoretical problems, addressed by operations research. Although, operations research is actively used in bottom-up approaches--from experimental observation to consistent theory-- it also widely overlaps modern and rapidly developing formal theories, for example the free-energy principle, integrated information theory, and may others. The special issue will cover a broad range of topics in the field of neuroscience using operations research approaches, methods, and theories. Potential topics include, but are not limited to, the following areas and methodologies of neuroscience: o intracellular signaling and regulation o synaptic plasticity o dynamics in heterogeneous neural networks o intelligent systems and control o perceptual, cognitive, and behavioral functions o learning and memory o spatio-temporal network analysis o behavioral economics and finance o linguistics and cognition o combinatorial optimization o signal and information processing o neuroimaging and functional brain imaging processing o computational modeling and simulation o formal theoretical approaches: the free-energy principle, integrated information, Bayesian inference, etc. The use of methods from modern operations research in neuroscience is a prerequisite for any paper submitted to this special issue to enter the reviewing process. Annals of Operations Research is abstracted and indexed in the following databases: Science Citation Index, Science Citation Index Expanded (SciSearch), Journal Citation Reports/Science Edition, SCOPUS, INSPEC, Zentralblatt Math, Google Scholar, EBSCO, CSA, ProQuest, ABS Academic Journal Quality Guide, Academic OneFile, Academic Search, Computer Abstracts International Database, Computer Science Index, CSA Environmental Sciences, Current Contents/Engineering, Computing and Technology, DBLP, ECONIS, Expanded Academic, International Abstracts in Operations Research, Mathematical Reviews, OCLC, SCImago, STMA-Z, Summon by ProQuest. The Special Issue is officially endorsed by EURO Conference 2018, Valencia. Guest Editors: Erik Kropat, Ruben A. Tikidji-Hamburyan, Gerhard-Wilhelm Weber Important Date: Submission deadline of full papers: December 1, 2018. Submission Details: The format of manuscripts for the Annals of Operations Research as well as guidelines can be found on the web page of Springer, the publisher of the journal: http://www.springer.com/journal/10479/submission. Authors should submit a cover letter mentioning that the paper is for a special issue and a manuscript via the journal's online submission site: http://www.editorialmanager.com/anor. When prompted, please select the article type “S.I.: OR in Neuroscience II”. All papers submitted for publication will be carefully refereed. In case of any question please contact by e-mail one of the following guest editors: Dr. Erik Kropat Department of Computer Science Universität der Bundeswehr München Werner-Heisenberg-Weg 39 85577 Neubiberg, Germany E-mail: erik.kropat(a)gmx.de Dr. Ruben A. Tikidji-Hamburyan Department of Cell Biology and Anatomy Health Sciences Center, Louisiana State University New Orleans, Louisiana 70112, USA E-mail: rtikid(a)lsuhsc.edu Prof. Dr. Gerhard-Wilhelm Weber Faculty of Engineering Management Chair of Marketing and Economic Engineering Poznan University of Technology ul. Strzelecka 11 60-965 Poznan, Poland E-mail: gerhard.weber(a)put.poznan.pl

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PhD Position in Computational Neuroscience and Neuroimaging at Jülich Research Centre and University of Düsseldorf Germany
by Martina Reske Nov. 9, 2018

Nov. 9, 2018

PhD Position in Computational Neuroscience and Neuroimaging at Jülich Research Centre and University of Düsseldorf Germany One PhD position is available in computational neuroscience with a focus on mathematical modeling of brain dynamics based on neuroimaging data in the lab of Prof. Dr. Simon Eickhoff at Jülich Research Centre and University of Düsseldorf in Germany. The PhD candidate will work on projects involving large-scale dynamical brain models derived from multimodal neuroimaging data (structural, functional & diffusion magnetic resonance imaging, MRI) combined with numerical simulations and analysis of model dynamics and parameter space. We are specifically looking for candidates with training in applied mathematics/computational neuroscience or related fields and experience in programming and numerical simulation of neuronal models/nonlinear dynamics systems. The candidate will be responsible for derivation, validation and analytical and numerical investigation of the whole-brain dynamical models, preparation of necessary neuroimaging data, and writing manuscripts for publication. The position provides an opportunity to work in an interdisciplinary environment and training in mathematical modeling of neuroimaging data and methods for data analysis. More details on the lab: http://www.fz-juelich.de/inm/inm-7/EN/ Requirements: * Master’s degree (or equivalent) in Applied Mathematics, Physics, Engineering, Computer Science or a related field. * Experience with programming languages such as C/C++/CUDA/Python/Matlab/R. * Familiarity with numerical simulations of nonlinear dynamical systems/differential equations. Experience with high-performance computing is a plus. * Strong writing, communication, interpersonal and organizational skills. * Experience with neuroimaging data processing and related analysis packages (FSL, SPM, MRtrix, etc.) will be of advantage. To apply: Please send your CV, names of two referees, one-page letter of motivation (emphasizing any related work/projects) and representative publications if any (up to 3) to Oleksandr Popovych via email (o.popovych(a)fz-juelich.de<mailto:o.popovych@fz-juelich.de>). Please mention “PhD application” in the subject. -- Dr. Martina Reske Scientific Coordinator Institute of Neuroscience and Medicine (INM-6) Computational and Systems Neuroscience & Institute for Advanced Simulation (IAS-6) Theoretical Neuroscience Jülich Research Centre and JARA Jülich, Germany Work +49.2461.611916 Work Cell +49.151.26156918 Fax +49.2461.619460 www.csn.fz-juelich.de<http://www.csn.fz-juelich.de> Office hours: TU & FR 9.00-17, WE & TH 9.00-13 ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Juelich GmbH 52425 Juelich Sitz der Gesellschaft: Juelich Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Dr. Karl Eugen Huthmacher Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender), Karsten Beneke (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt, Prof. Dr. Sebastian M. Schmidt ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------

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Ph.D. position in deep learning for signal processing at University of Oldenburg
by Jörn Anemüller Nov. 9, 2018

Nov. 9, 2018

A Ph.D. position in the field of deep learning for signal processing is available at University of Oldenburg, Germany, within the newly established, DFG-funded collaborative research centre "CRC 1330 - Hearing Acoustics" in the group of Jörn Anemüller. For details, see below or contact me directly (joern.anemueller(a)uol.de, https://uol.de/en/computational-audition/statistical-modelling/) Kind regards, Jörn The Computational Audition Group at the Department of Medical Physics and Acoustics, University of Oldenburg, Germany, seeks a highly motivated PhD student (75 % of full time, TV-L E13, 3 years, with possibility of extension) in the field of Deep Learning for Signal Processing Our group investigates audio signal recognition with multi-channel microphone arrays, identifying important sound sources in real-world acoustic scenes, and performing source separation to enhance e.g. an attended speech signal. Applicants for the position must hold an academic university degree (master or equivalent) in physics, engineering, computer science or a related discipline and should have knowledge in at least one of the following fields: - machine learning, - speech recognition, - acoustic event detection, - speech and audio processing. Excellent knowledge of scientific programming languages such as Python or MATLAB, as well as excellent English language skills are required. The position is funded by the newly established DFG collaborative research centre CRC 1330 "Hearing Acoustics", which aims at improving human communication in real-world acoustic scenes and is a long-term collaboration of researchers from Oldenburg, Aachen and Munich. For more information about the CRC see https://www.uni-oldenburg.de/sfb1330. The Computational Audition Group is part of the Department of Medical Physics and Acoustics at University of Oldenburg. We offer an international scientific environment and world-class research facilities. For more information about the group and the department see https://uol.de/computational-audition/ and https://uol.de.de/en/mediphysics-acoustics/. The University of Oldenburg is dedicated to increase the percentage of women in science. Therefore, female candidates are strongly encouraged to apply. In accordance to § 21 Section 3 NHG, female candidates with equal qualifications will be preferentially considered. Applicants with disabilities will be given preference in case of equal qualification. Applications including a CV, a motivation letter, copies of relevant certificates and the name and contact details of two references should be sent as single pdf-file to joern.anemueller(a)uni-oldenburg.de or to Dr. Jörn Anemüller Faculty VI Department of Medical Physics and Acoustics Universität Oldenburg D - 26111 Oldenburg Tel. (+49) 441 798 3610 The application deadline is 28th of November 2018. *******************************************************

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Re: [Comp-neuro] PhD Studentship in Computational Neuroscience
by Dimitris Pinotsis Nov. 9, 2018

Nov. 9, 2018

The School of Psychology at City, University of London, is offering * one full-time, three-year doctoral studentship for 2019/20 entry*. Applications are invited from exceptional UK, EU, and international graduates wishing to pursue cutting-edge research in the following areas of Neuroscience and Psychology: *Autism Spectrum Disorders, Cognitive Neuroscience, Computational Neuroscience, Brain Imaging, Computational Psychiatry, Decision Making, Behavioral Economics, Counselling, Health and Organizational Psychology. * For information on how to apply for the studentships, please go to https://www.city.ac.uk/courses/research-degrees/psychology *Closing date: 23.59 on 20th January 2019* For any enquiries, please email SASS-enquiries(a)city.ac.uk We encourage potential applicants to contact prospective supervisors to discuss possible research projects prior to submitting an application. For further details about the psychology department please go to https://www.city.ac.uk/arts-social-sciences/psychology#unit=research where you will find information about research groups and individual staff interests. Full information about all our doctoral studentships can be found at: https://www.city.ac.uk/study/fees-and-funding/scholarships-and-bursaries/sa… *What is Offered* · An annual bursary at the prevailing ESRC rate (£16,777 in 2018/19) · A full tuition-fee waiver for UK and EU students. Applications from overseas applicants are welcome, but the applicant must make appropriate arrangements to cover the difference between the overseas and UK tuition fee. · Further funds to support research expenses (up to £1000 over three years) As part of our commitment to doctoral student training, you will also be eligible for appointment as a Graduate Teaching Assistant and are likely to be offered teaching-related duties within your department (to a maximum of 150 hours each year). This work will be paid in full. *Eligibility* The studentships will be awarded on the basis of outstanding academic achievement and the potential to produce cutting-edge research. · Applicants must hold at least a 2.1 honours degree and a merit-level Master’s degree in a relevant subject (or international equivalent) · Applicants whose first language is not English must have achieved at least 7.0 in IELTS or a recognised equivalent · Applicants must not be currently registered as a doctoral student at City, University of London, or any other academic institution <SASS-enquiries(a)city.ac.uk>

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PhD Projects - ARC Training Centre in Cognitive Computing for Medical Technologies
by David Grayden Nov. 7, 2018

Nov. 7, 2018

Current PhD Project Openings at the ARC Training Centre in Cognitive Computing for Medical Technologies We are seeking Expressions of Interest from potential Graduate Researchers to work on the following PhD projects in Australia. These project are embedded within the Centre, where up to 14 PhD students, 5 post-doctoral researchers, and 11 University of Melbourne staff will collaborate across 4 research streams with researchers at IBM Research and a number of Australian Universities, including The University of Melbourne, RMIT University, the University of South Australia, and Western Sydney University. Each student will be jointly supervised by Universities and IBM Research and will spend at least 12 months of their candidature working on site at an IBM Research laboratory. These positions are supported by a scholarship and a supplemented living stipend of A$34,848 per annum. Projects available: 1. Context-specific clinical decision support leveraging clinical practice guidelines 2. Multi-document summarisation supporting clinical evidence review 3. Seizure forecasting using neural networks 4. Deep learning for fitting neural mass models to EEG 5. Brain-computer interfaces for low-powered mobile/wearable devices 6. Multimodal brain-computer interfaces for augmented reality and virtual reality applications If interested, please visit: http://aimedtech.org.au/phd-openings.html Regards, David Professor David B. Grayden Head of Department Dept of Biomedical Engineering Melbourne School of Engineering The University of Melbourne, Victoria 3010 Australia http://www.bme.unimelb.edu.au | https://www.linkedin.com/in/dgrayden [cid:image001.jpg@01D1F264.94C20650] This email and any attachments may contain personal information or information that is otherwise confidential or the subject of copyright. Any use, disclosure or copying of any part of it is prohibited. The University does not warrant that this email or any attachments are free from viruses or defects. Please check any attachments for viruses and defects before opening them. If this email is received in error please delete it and notify us by return email.

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One fMRI MVPA Post-Doc (very competitive salary) 5 year position available under an ERC Starting Grant on the organization of object knowledge
by Jorge Almeida Nov. 6, 2018

Nov. 6, 2018

The Proaction Laboratory (Perception and Recognition of Objects and Actions; http://gaius.fpce.uc.pt/pessoais/jorgealmeida/proaction_home.html; Jorge Almeida’s Lab) at the University of Coimbra (www.uc.pt) Portugal is looking for a motivated and bright Post-doctoral researcher to work on an ERC Starting Grant project (ContentMAP) on the neural organization of object knowledge. In this project we will explore how complex information is topographically organized in the brain using fMRI and state of the art analytical techniques, as well as computational approaches, and neuromodulation. Excellent understanding of and experience with fMRI and data analysis is required. Strong programming skills (matlab, python, etc.) are also a requirement. Experience with data analysis techniques using MVPA and other multivariate approaches (e.g., Representation Similarity Analysis). Very good English (oral and written) communicative skills are necessary. The position is for a maximum of 5 years, and will start in February 2019. The position involves no formal teaching (unless the candidate wants to). It does involve, however, lab mentoring. The salary is extremely competitive – between 2200 and 2400 euros per month (dependent on experience), tax free (annual 26400-28800 euros tax free). This value is on par with the average salaries at top American institutions, as well as London, Paris, etc. However, the cost of living in Portugal (and particularly in Coimbra) is much lower. According to Numbeo, 2400 euros would be equivalent to 4850 pounds in London/4800 euros in Paris/6615 USD in Boston/6210 USD in Los Angeles/ 8330 USD in New York). The researcher will work directly with Jorge Almeida in Coimbra, but the laboratory has extensive collaborations with researchers throughout the world. In fact, there may be the option of spending some time in another lab as part of the position. The researcher will also be encouraged to develop her/his own projects and look for additional funding so that the stay can be extended. We have access to a 3T MRI scanner with a 32-channel coil (with EEG inside the scanner), to tDCS with neuronavigation, and to a fully set psychophysics lab. We have EEG and eyetracking on site. We also have access, through other collaborations, to a 7T scanner. Finally, the University of Coimbra is a 700 year old University and has been selected as a UNESCO world Heritage site. Coimbra is one of the most lively university cities in the world, and it is a beautiful city with easy access to the beach and mountain. The deadline for the application is NOVEMBER 20, but you should apply as soon as you can, as we may fill in the positions sooner than the deadline if there are candidates with a superb fit with the requirements and project. The interested candidates should email Jorge Almeida for questions and applications. Please send an email with the subject “Post-doc position underERC - ContentMAP” with your*curriculum vitae, list of publications, 2 reference letters, and a short description of your experience in the field and how you fulfill the requirements (fit with the position)* to: jorgealmeida(a)fpce.uc.pt.

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Research internship for 2nd year master student in Toulouse, France
by MASQUELIER Timothee Nov. 5, 2018

Nov. 5, 2018

TOPIC: Spiking neural networks for bird song detection SUPERVISORS: Timothée Masquelier (computational neuroscience) and Thomas Pellegrini (machine learning for audio processing) STARTING DATE: early 2019 DURATION: 5 months PLACE: Toulouse, France (Centre de Recherche Cerveau et Cognition and Institut de Recherche en Informatique de Toulouse) STIPEND: 560€/month The goal of the internship is to use spiking neural networks (SNN) to detect bird songs in audio recordings. Several learning rules will be evaluated, including spike-timing-dependent plasticity (STDP). More information: https://www.dropbox.com/s/psvqubjdlral6zf/Masquelier-Pellegrini-AO%20M2%20T… We are looking for an outstanding student with a strong quantitative background (computer science, physics, applied maths...) and a keen interest in neuroscience. Applicants should send their CV and a brief statement of purpose to: timothee.masquelier(a)cnrs.fr and Thomas.Pellegrini(a)irit.fr Informal enquiries are welcome.

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Postdoc at Aix-Marseille University in computational modelling of basal-ganglia-cortico-cerebellar circuits
by BATTAGLIA Demian Nov. 4, 2018

Nov. 4, 2018

Applications are invited for a: POSTDOCTORAL POSITION at Aix-Marseille University (southern France) under the joint mentoring of Dr. Demian Battaglia (Institute for Systems Neuroscience - INS) and Dr. Nicole Malfait (Institut de Neurosciences de la Timone - INT). This two-years position is funded by the project ANR (Agence National de la Recherche) “SENCE - Movement disorders in Parkinson’s disease: The role of somatoSENsory deficits and CErebellar anomalies”, involving researchers from Aix-Marseille University and the University of Oxford, as well as clinicians of the Hôpital de la Timone (AP-HM). In the context of this project, behavioral, electrophysiological (EEG/subthalamic nucleus LFP) and neuroimaging data will be recorded in patients with Parkinson's disease, under different medication (ON/OFF L-Dopa) and deep brain stimulation (DBS) conditions. In particular, effects of conventional continuous “open-loop” and "closed-loop" (adaptive) DBS will be contrasted. Rich expertise will be thus available in psychophysics and electrophysiology of sensorimotor systems (Nicole Malfait, INT; Huiling Tan, University of Oxford), structural and functional neuroimaging analyses (Olivier Coulon, INT), basal ganglia involvement in sensorimotor coordination (Andrea Brovelli, INT), and DBS (Alexandre Eusebio, AP-HM; Huiling Tan, University of Oxford) and theoretical and computational modelling of oscillating circuits dynamics (Demian Battaglia, INS). The postdoctoral fellow will participate to the design of circuit models (mean-field and spiking) with realistic anatomy, including known basal ganglia/cortical loops, as well as connections between basal ganglia and cerebellum, whose role has been until now only poorly studied. It has indeed recently been hypothesized that basal ganglia deregulation may directly interact with cerebellar predictive functions contributing to movement disorders in Parkinsons’s disease. Computational simulations of extended BG–cortex–cerebellum circuits will be used to reverse engineer circuit mechanisms responsible for the transition from normal to pathological oscillatory dynamics –also in relation to Dopamine levels– and to model and optimize the impact of adaptive deep brain stimulation protocols. Candidates should have already acquired experience in the computational modelling of neural circuits during their PhD. Previous experience in the modelling of BG circuits is a plus. Candidates should be able to work in a dynamic, interdisciplinary and international work environment. Salary corresponds to French national guidelines (~2K € net per month, experience-dependent), with travel and equipment funds. The successful candidate will integrate the Theoretical Neuroscience Group at the Institute for Systems Neuroscience (INS), located on the same campus as the Institut des Neuroscience de la Timone (INT) and the Hôpital de la Timone (AP-HM). The integrative and clinical neuroscience community in Marseille is among the most lively in Europe and Marseille is a vibrating city, with wonderful natural surroundings and home to the largest French-speaking university in the world, with an emphasis on interdisciplinary studies. Interested candidates should send a cv, a brief description of qualifications and research interests and the name of two reference contacts to both the co-directors: Demian Battaglia demian.battaglia(a)univ-amu.fr<mailto:demian.battaglia@univ-amu.fr> Nicole Malfait nicole.malfait(a)univ-amu.fr<mailto:nicole.malfait@univ-amu.fr> Feel free to inquire for further information. Applications from under-represented categories in STEM sciences are welcome and supported.

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