- Comp-neuro - lists.cnsorg.org

Neural data scientist position at the Flatiron Institute
by Eftychios Pnevmatikakis May 9, 2019

May 9, 2019

Apologies for cross-posting: The Center for Computational Mathematics at the Flatiron Institute in New York City is looking for a full time data scientist to work on neuroscience related projects. The main focus of this position will be on the development and support of CaImAn <https://github.com/flatironinstitute/caiman>, an open source software package for standardized and reproducible analysis of fluorescence microscopy (calcium imaging) data. Basic duties: - Researching novel data analysis algorithms for large scale fluorescence microscopy data. - Maintenance of existing codebase and user support. Qualifications: - BA/BS degree (MA or PhD preferred) in Engineering, Computer Science, Mathematics, Neuroscience or related technical field. - Programming experience in Python. - Background in either neural data analysis, machine learning, statistics, image processing, or computer vision is preferred. Informal inquiries should be sent to epnevmatikakis(a)flatironinstitute.org For more information and to apply please follow this link <https://simonsfoundation.wd1.myworkdayjobs.com/en-US/simonsfoundationcareer…> .

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Professorship in Artificial Intelligence
by Steuber, Volker May 8, 2019

May 8, 2019

Professor of Artificial Intelligence University of Hertfordshire, UK School of Computer Science, College Lane Campus, Hatfield Salary £58,293 to £64,397 pa dependent on skills and experience FTE: Full time position working 37 hours per week (1.0FTE) Duration of Contract: Permanent position Closing date: 3 September 2018 Applications are invited for an exceptionally well qualified Professor of Artificial Intelligence of international standing who shares our commitment to research-informed teaching, embraces the research impact agenda, and values collegiality. Applicants will strengthen existing activity within the School and develop it further, enhancing the research strengths and external reputation of the School of Computer Science and contributing significantly to its performance in future research assessments and collaborations with public and commercial partners. The successful applicant will connect to and complement the research conducted by the Adaptive Systems Research Group within the Centre for Computer Science and Informatics Research. The School hosts the University of Hertfordshire Robot House, a facility ubiquitously equipped with low-cost sensors providing a realistic environment for experiments with robotics in a smart home; a fully-fledged RoboCup lab for development of humanoid robots participating in international competitions, and a large variety of different robotic platforms, including iCub and Baxter. We encourage applications from researchers across a wide spectrum of AI, and particularly encourage applications from researchers working on emerging topics in AI. Possible fields include, but are not limited to: • Machine learning: reinforcement learning, Deep Methods, statistical methods, large scale data modelling/intelligent processing and high-performance learning algorithms • Robotics: embodied and/or cognitive robotics, HRI, robot safety, emotional/social robots, smart homes and sensors, sensor fusion, assistive robotics • Complex Systems: collective intelligence, adaptive, autonomous and multi-agent/robot systems, collective and swarm intelligence, social and market modelling, adaptive, evolutionary and unconventional computation • Mathematical Modelling: statistical modelling, information-theoretic methods, compressive sensing, intelligent data visualization, multiscale models, optimization • Emerging Topics in AI: computer algebra and AI, topological methods (e.g. persistent homology), modern topics in games and AI • AI and applications: financial modelling, AI and biology/physics/cognitive sciences • Foundations: fundamental questions of intelligence and computation, emergence of life/intelligence, Artificial Life As well as providing research supervision at PhD and MSc level, the School of Computer Science offers modules in Artificial Intelligence, machine learning, neural and evolutionary computing, as well as Artificial Life on the BSc and MSc programmes. Applicants will be committed to a strong research and research-informed teaching agenda, and will actively contribute to increase research impact of the School, in the enthusiastic, welcoming and collegiate environment of the school. Applicants must hold a PhD (or equivalent) in a relevant subject, possess excellent communication skills in English, an internationally excellent research record and reputation, including publications of the highest quality suitable for submission to the REF (UK Research Excellence Framework). Applicants are expected to show evidence of experience and success in research/commercial income generation, engagement with the research impact agenda, engagement with key stakeholders in the relevant Artificial Intelligence community and management and leadership ability. The professor will have opportunity to contribute actively to interdisciplinary research projects at the school and university level. Applications must be made online https://www.herts.ac.uk/contact-us/jobs-and-vacancies/academic-vacancies?, reference 016194?. Informal enquiries may be addressed to Dr Volker Steuber (Associate Dean Research, v.steuber(a)herts.ac.uk) or Professor William Clocksin (Dean of School, w.clocksin(a)herts.ac.uk) Please note that applications sent directly by email will not be accepted.

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ML staff scientist position at NIMH/NIH
by Ryan Philips May 8, 2019

May 8, 2019

The National Institute of Mental Health (NIMH), a major research component of the National Institutes of Health (NIH), and the Department of Health and Human Services (DHHS), is seeking exceptional candidates for a Staff Scientist position in the Intramural Research Program (IRP), Section on Neurobiology of Fear & Anxiety. This section examines neural systems models of emotion/cognition interactions. This is done in two ways: one that focuses on anxiety in health and disease, and the other that uses a developmental perspective using large datasets. Four types of data are exploited, clinical/behavioral assessment, psychophysiology, fMRI (particularly 7T high-resolution scanner) and MEG. The candidate must have a doctoral degree (PhD) in computational neuroscience, or computer science/engineering and at least 5 years of experience post Ph.D. analyzing large datasets, modeling complex neural systems, using advanced machine learning algorithms. Experience with technical computing in MATLAB, R, C++ and a strong mathematical skill set is required. Knowledge of multi threaded and paralell computing environments is desirable. An interest in neuroscience or prior experience in neuroscience related fields is a plus. The staff scientist is expected to be a key member of the Section on Neurobiology of Fear and Anxiety, contributing to analytical methodology, design of new projects. Salary will be commensurate with education and experience. Applicants should send curriculum vitae and two letters of recommendation to Monique Ernst, MD, PhD, 301-675-4525, ernstm(a)mail.nih.gov. Applications will be accepted beginning April 1st. The position will be open until filled. HHS and NIH are Equal Opportunity Employers. Applications from women, minorities and persons with disabilities are strongly encouraged.

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Call for applications: NeuroNex Jr Scientist Workshop on Advance Neural Data Analysis
by Allison Ong May 8, 2019

May 8, 2019

Call for applications: NeuroNex Jr Scientist Workshop on Advance Neural Data Analysis at Columbia University Apply here: https://tinyurl.com/yyxnacmd Application Deadline: May 25, 2019 Workshop dates: August 26 - 29, 2019 Details: https://ctn.zuckermaninstitute.columbia.edu/junior Hosted by the Center for Theoretical Neuroscience at Columbia University Co-Organized by the NeuroNex Theory Team at University of Houston This workshop is intended for PhD students and postdocs who want to learn and share with their peers new advanced techniques in data analysis and apply them to complex neural datasets. Attendees will present their research projects, followed by a hands-on programming tutorial on the computational techniques used in their work. We encourage applications from female scientists and those belonging to underrepresented minorities. Funds will be provided by NSF's NeuroNex initiative to cover travel, accommodation, and meals. Questions? Email neuraldataworkshop(a)gmail.com

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Fully-funded 3 year PhD studentship in Mark Humphries' lab (Nottingham)
by Mark Humphries May 8, 2019

May 8, 2019

A fully funded PhD position is available with Prof. Mark Humphries at the University of Nottingham (UK), on a project entitled "Mapping the wires using neural activity". The studentship is for 3 years, and is open to UK/EU citizens. The wiring between neurons, the connectome, defines their activity. So in order to understand the activity of neurons we record from, we want to know the wiring between them. But current technology does not allow the simultaneous recording and tracing of the connections between neurons. To solve this problem, this project will develop computational techniques to accurately infer wiring between neurons from the next generation of imaging techniques that directly record neuron voltages. The project will combine development of algorithms, simulations of neural circuits as test-beds, and analysis of real imaging data from neural populations. For full details and application instructions please see: https://www.findaphd.com/phds/project/fully-funded-phd-position-mapping-the… For more on the Humphries Lab, see our website: https://www.humphries-lab.org/ For further information about the project, or to discuss other projects, please contact Prof Mark Humphries (mark.humphries(a)nottingham.ac.uk) This message and any attachment are intended solely for the addressee and may contain confidential information. If you have received this message in error, please contact the sender and delete the email and attachment. Any views or opinions expressed by the author of this email do not necessarily reflect the views of the University of Nottingham. Email communications with the University of Nottingham may be monitored where permitted by law.

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PhD position in computational neuroscience with Prof. Laurenz Wiskott in Bochum, Germany
by Laurenz Wiskott May 8, 2019

May 8, 2019

Please forward this job advertisement to candidates who might be interested. Thanks, Laurenz Wiskott. ___________________________________________________________________________ Open position for a PhD student with Prof. Laurenz Wiskott at the Institute for Neural Computation, Bochum, Germany ___________________________________________________________________________ University: The Ruhr-Universität Bochum is one of the leading research universities. The university draws its strengths from both the diversity and the proximity of scientific and engineering disciplines on a single, coherent campus. This highly dynamic setting enables students and researchers to work across traditional boundaries of academic subjects and faculties. Institute: Institute for Neural Computation Ruhr-University Bochum Universitaetsstr. 150 D-44801 Bochum, Germany, EU The Institute for Neural Computation is a central research institute at the Ruhr-University Bochum, see https://www.ini.rub.de/. It focuses on the dynamics and learning of perception and behavior on a functional level but is otherwise very diverse, ranging from neurophysiology and psychophysics over computational neuroscience to machine learning and technical applications. Research group: Prof. Dr. Laurenz Wiskott, see https://www.ini.rub.de/research/groups/theory_of_neural_systems/ Research topics: We are looking for an outstanding candidate who will be working on a system-level model of spatial navigation with the hippocampus as one of its central areas. We use methods from neural networks and machine learning. It is also planned to simulate experiments done with rat and/or mice by our experimental partners. The position is part of a joint team with Prof. Sen Cheng working on developing a system-level model of hippocampal function for memory and navigation. This is being done in close interaction with a team working on similar questions from the machine learning perspective. Teaching: There is a teaching load of 3 hours per week during the semester, in particular for a programming course in python. Time: The appointment will be for three years and can then be extended for one more year if needed. The position is immediately available. Requirements: Candidates should have an education (equivalent to a MSc) in computer science, physics, mathematics, electrical engineering or any related field. Required are strong mathematical and programming skills (ideally in python) as well as the ability to communicate and work well in a team. Salary: Salary is 75% of salary scale TV-L E13. Inquiries: Informal inquiries can be addressed to Prof. Laurenz Wiskott <laurenz.wiskott(a)rub.de>. Application: Applications (CV, transcript of records for MSc and BSc, statement of purpose) should be sent as a single pdf file to Prof. Laurenz Wiskott <laurenz.wiskott(a)rub.de>. Ruhr-University Bochum is committed to equal opportunity in employment and gender equality in its working environment. We therefore look forward to applications from qualified women. Applications from appropriately qualified handicapped persons are also encouraged.

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Registration and Call for Abstracts for the 2nd Conference of the Timing Research Forum
by teki May 7, 2019

May 7, 2019

Dear all, Registration and call for abstracts and symposium proposals for the 2nd Conference of the Timing Research Forum <http://timingforum.org/> (TRF2) is now open. TRF2 is the second international conference dedicated to multidisciplinary research on timing and time perception and will be held at UNAM in Queretaro, Mexico from October 15-17, 2019. TRF2 builds upon the massive success of TRF1 held in Strasbourg, France in Oct. 2017 that was attended by 250+ scientists with a shared passion for understanding timing and time perception through varied experimental, computational and clinical approaches. The deadline to submit abstracts and symposium proposals is May 25, 2019. During the submission process, please indicate if you wish to present an oral or poster presentation, and express your interest for student travel awards. All selected abstracts will be published in the journal, Timing and Time Perception Reviews <http://www.brill.com/node/37536>. We are pleased to announce three impressive Keynote Speakers - - Kia Nobre, Oxford University - Mehrdad Jazayeri, MIT - Albert Tsao, Stanford University Albert Tsao will give the TRF2 ECR Keynote Prize Lecture based on his paper - ’Tsao, Sugar, Lu, Wang, Knierim, Moser, Moser (2018; Nature) Integrating time from experience in the lateral entorhinal cortex’, that was selected by the members of TRF as the 'Best Timing Paper of 2018'. We look forward to proposals of sponsorship. Our sponsorship booklet is available here <https://drive.google.com/open?id=1UzZk6pYk5RgaNOXgpbnPXP4hHcHf1bz6>. Anyone interested in joining the Timing Research Forum can do so by following the instructions at this link <http://timingforum.org/membership>. For further details about abstract submission guidelines, conference program, registration, accommodation etc., please visit the TRF2 conference website - http://trf2.inb.unam.mx/. We encourage everyone to register early to avail discounted prices and look forward to seeing you in Queretaro! TRF2 Conference Chairs: Hugo Merchant, UNAM Victor de Lafuente, UNAM trf2mexico(a)gmail.com TRF2 Scientific Committee: Dean Buonomano, UCLA John Iversen, UCSD Rich Ivry, UC Berkeley Laurel Trainor, McMaster University Virginie van Wassenhove, INSERM Martin Wiener, George Mason University https://trf2.inb.unam.mx/?page_id=228 Timing Research Forum: Sundeep Teki, Amazon Alexa AI Argiro Vatakis, Panteion University TRF ECR Committee timingforum.org

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2019 NEURON Summer Course
by Carnevale, Nicholas May 7, 2019

May 7, 2019

A few seats remain open for the 2019 NEURON Summer Course, but you'll have to act quickly because the registration deadline is Friday, May 31, and no applications will be accepted after that date. This year's course will be held at the Minneapolis campus of the University of Minnesota (UMN) from Monday, June 10, through Saturday, June 15. It provides a thorough introduction to computational modeling of neurons and networks with NEURON, and is suitable for individuals at all levels of expertise. UMN has made a limited number of private and semiprivate rooms in graduate student housing available to course registrants at very affordable rates; further information will be provided to applicants upon payment of the course's registration fee. For more information and the on-line registration form, see https://neuron.yale.edu/neuron/static/courses/summer2019/summer2019.html --Ted

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7th Baltic-Nordic School on Neuroinformatics BNNI 2019, August, Frankfurt Germany
by Martin Mittag May 6, 2019

May 6, 2019

*7th Baltic-Nordic School on Neuroinformatics BNNI 2019* *Modeling Healthy and Diseased Brain: From Dendrites to Neurons and Networks*** *Frankfurt am Main, Germany* *26-28 August 2019* ** *We invite* Advanced master students, doctoral students, and postdoctoral researchers are welcome to participate in the BNNI 2019 to be held at the FIAS, the Frankfurt Institute for Advanced Studies, Frankfurt Main, Germany in August 2019. *The Course* The course is interdisciplinary and covers modeling at different levels of organization of the brain, from single neurons to microcircuits and networks. We will focus on differences between healthy and diseased brains. Participants will learn about compartmental and morphological modeling of synapses, dendrites and neurons, as well as simulating local field potentials (LFPs). The course combines lectures, tutorials and computer exercises. This summer school is the seventh in the series of the Baltic-Nordic Courses on Neuroinformatics (BNNI 2013 in Kaunas, Lithuania; BNNI 2014 in Tampere, Finland; BNNI 2015 in Tartu, Estonia; BNNI 2016 in Warsaw, Poland; BNNI 2017 in Kaunas, Lithuania; BNNI 2018 in Ventspils, Latvia). *Target audience* The target audience of the course will be advanced master students, doctoral students and postdoctoral researchers in biomedical and technology sciences, from medicine, biology, psychology, to mathematics, informatics, information technology, physics, chemistry, who would like to get an introduction to neuroinformatics and computational neuroscience. Some experience with programming and quantitative reasoning as well as strong interest in computational and mathematical modeling of the brain will be desirable but not necessary to benefit from the school. We will use the NEURON simulation environment for biophysical realistic models of neurons and the Matlab software package including the TREES toolbox. Desktop computers will be provided for the exercise part. *Important Dates* * 15 May 2019*: Application deadline * 1 June 2019:* Acceptance notification *26 - 28 August 2019:* School *Venue* The lectures will be held on 26th to 28th of August, 2019, at the: Frankfurt Institute for Advanced Studies, Ruth-Moufang-Straße 1, 60438 Frankfurt am Main, Germany. Frankfurt is a very international city in the heart of Germany and Europe. The city centre combines the historic, medieval past with the modern, economic present. We are looking forward to welcoming you in Frankfurt! *More information and applications at* _web.lsmuni.lt/bnni2019/en <http://web.lsmuni.lt/bnni2019/en>_ *Practical arrangements* The organizers will provide teaching materials, meals and coffee during the course. The participants are expected to cover their travel and health insurance expenses. There is a small fee to be paid (30 - 100 EUR). If you are not sure whether you can afford it, apply anyway. We have some stipends for members of OCNS (www.cnsorg.org) to give away. Student residence is provided and close to the campus in the Relexa hotel. *Faculty includes* Marja-Leena Linne, Faculty of Medicine and Health Technology, Tampere University, Tampere, Finland Bruce Graham, Institute of Mathematics and Informatics, University of Stirling, UK Ausra Saudargiene, Neuroscience Institute, Lithuanian University of Health Sciences, Kaunas, Lithuania Arnd Roth, Wolfson Institute of Biomedical Research, University College London, UK Misha Tsodyks, Department of Neurobiology, Weizmann Institute of Science, Israel Dieter Jäger, Biology Department, Emory University, Atlanta, USA Gaute Einevoll, Norwegian University of Life Sciences & University of Oslo, Norway Matthew Larkum, Neurocure Cluster of Excellence, Humboldt University, Berlin, Germany Daniel Wojcik, Nencki Institute of Experimental Biology, Warsaw, Poland Hermann Cuntz, ESI & FIAS, Frankfurt, Germany Peter Jedlicka, ICAR3R, Justus Liebig University Gießen, Germany Gilles Laurent, MPI for Brain Research, Frankfurt, Germany Jochen Triesch, FIAS, Frankfurt, Germany Tatjana Tchumatchenko, MPI for Brain Research, Frankfurt, Germany Julijana Gjorgjieva, MPI for Brain Research, Frankfurt, Germany Arvind Kumar, KTH Royal Institute of Technology, Stockholm, Sweden Aiste Pranckeviciene, Lithuanian University of Health Sciences, Kaunas, Lithuania Viola Priesemann, MPI Göttingen, Germany Matthias Kaschube, FIAS, Frankfurt, Germany *Organizing committee* **** **Peter Jedlicka, ICAR3R, Justus Liebig University Gießen, Germany Ausra Saudargiene, Neuroscience Institute, Lithuanian University of Health Sciences, Kaunas, Lithuania Marja-Leena Linne, Faculty of Biomedical Sciences and Engineering, Tampere University of Technology, Tampere, Finland Jochen Triesch, FIAS, Frankfurt, Germany * We are looking forward to welcoming you at the BNNI 2019 in Frankfurt am Main, Germany!*

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NEST Conference 2019 / Registration Deadline 15 May / Extended Poster Deadline 15 May
by Hans Ekkehard Plesser May 6, 2019

May 6, 2019

Dear Colleagues! We are looking forward to an exciting NEST Conference 2019 at NMBU, Ås, Norway on 24-25 June 2019 with talks covering a wide range of topics from simulation technology to large-scale network simulations as shown below. Please register at https://www.nest-initiative.org/conference by Wednesday, 15 May 2019 We still have a few slots for conference posters available, so you are still welcome to submit your poster until 15 May. Please see the conference website for instructions. We are looking forward to seeing you in Ås in June! Hans Ekkehard Plesser, Susanne Kunkel & Dennis Terhorst NEST Conference 2019 Talks (only presenting author shown) • GeNN: GPU-enhanced neural networks (James Knight) • Communication sparsity in distributed Spiking Neural Network Simulations to improve scalability (Carlos Fernandez-Musoles) • Sleep-like slow oscillations induce hierarchical memory association and synaptic homeostasis in thalamo-cortical simulations (Cristiano Capone) • Implementation of a Frequency-Based Hebbian STDP in NEST (Alberto Antonietti) • Spike Timing Model of Visual Motion Perception and Decision Making with Reinforcement Learning in NEST (Petia Koprinkova-Hristova) • What’s new in the NEST user-level documentation (Jessica Mitchell) • ICEI/Fenix: HPC and Cloud infrastructure for computational neuroscientists (Jochen Eppler) • Construction and characterization of a detailed model of mouse primary visual cortex (Stefan Mihalas) • Large-scale simulation of a spiking neural network model consisting of cortex, thalamus, cerebellum and basal ganglia on K computer (Jun Igarashi) • Simulations of a multiscale olivocerebellar spiking neural network in NEST: a case study (Alice Geminiani) • A NEST CPG for pythonic motor control: Servomander (Harry Howard) • NEST desktop: A web-based GUI for NEST simulator (Sebastian Spreizer) • Tools for the Visual Analysis of Simulation Datasets (Óscar David Robles) • Neural Network Simulation Code for Extreme Scale Hybrid Systems (Kristina Kapanova) • NEST performance profiling (Susanne Kunkel) -- Prof. Dr. Hans Ekkehard Plesser Head, Data Science Section Faculty of Science and Technology Norwegian University of Life Sciences PO Box 5003, 1432 Aas, Norway Phone +47 6723 1560 Email hans.ekkehard.plesser(a)nmbu.no Home http://arken.nmbu.no/~plesser

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