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Analysis of human intracranial recordings using integrated information: (up to) 3 year postdoc in Melbourne, Australia
by Naotsugu Tsuchiya Jan. 7, 2018

Jan. 7, 2018

Postdoc position available (up to 3 years) at Monash Neuroscience of Consciousness (MoNoC), Monash University, Melbourne, Australia. We are seeking outstanding postdoctoral research fellows with strong skills in computational or mathematical neuroscience, whose research ambition is to identify the physical substrate of conscious experience. If you are successful, you will work in Tsuchiya's lab at Monash, on our two Australian Research Council (ARC) Discovery Project grants (2018-2020). Both projects will involve the analysis of intracranial neural recordings from multiple brain areas, which are simultaneously recorded, and conscious experience is also characterised. In one of the projects, you will develop mathematical tools and apply the tools to empirically test predictions from "integrated information theory of consciousness" (Tononi 2004 BMC, 2016 NRN). For the overall idea of the project, please see Haun et al 2017 eNeuro, Oizumi et al 2016 PLoS Comp & PNAS). You will work both independently and collaboratively with multiple PIs. Starting date is relatively flexible. Late-stage PhD students will be considered (only those with substantial publication records). If you are interested, please send your CV to Nao Tsuchiya <naotsugu.tsuchiya(a)monash.edu>. Strong candidates will be contacted through emails and interviews. Applications will be open until the ideal candidate is identified. Thank you Nao -- -- *Nao (Naotsugu) Tsuchiya* Associate Professor *Monash Institute of Cognitive and Clinical Neurosciences* Attention and Memory Program School of Psychological Sciences Monash University 770 Blackburn Monash Brain Imaging facility, Clayton, VIC 3800 Australia T: +61 3 9905 4564 <+61%203%209905%204564> E: naotsugu.tsuchiya(a)monash.edu W: homepage: http://users.monash.edu.au/~naotsugt/Tsuchiya_Labs_Homepage http://med.monash.edu.au/psych/email-sig/miccn-email-sig.jpg <http://www.monash.edu/neuro-institute/> 2. ARC Future Fellow 3. Visiting Researcher at Department of Dynamic Brain Imaging, Advanced Telecommunications Research (ATR), Japan 4. Visiting Researcher at CiNet, Osaka University, Japan orcid.org/0000-0003-4216-8701

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Postdoc at University of Leicester, UK
by Quian Quiroga, Rodrigo (Prof.) Jan. 6, 2018

Jan. 6, 2018

We are looking for a postdoc at the Centre for Systems Neuroscience at the University of Leicester, UK. The candidate will work on the analysis and recording of neurophysiology data as part of the research activities of the Centre for Systems Neuroscience (www.le.ac.uk/csn) The project will investigate concept representations in the mice hippocampus, analogous to the type of concept representations we have described in the human hippocampus – what are known as concept cells (a.k.a. Jennifer Aniston neurons) – that means, neurons that selectively fire to specific concepts, like different pictures and the written or spoken name of a particular person (see e.g. Quian Quiroga et al, Nature 2005; Quian Quiroga Nature Reviews Neuroscience 2012; Quian Quiroga et al, Scientific American 2013). The successful candidate will contribute to the recording and, particularly, the analysis of the 2-photon imaging and electrophysiology data collected in head fixed mice performing tasks in a virtual reality setup. The synergy between the human and mice recordings aims at gaining a deeper understanding of type of neural representations used by different species for memory processes. The candidate will not only contribute to the collection and analysis of the data but also to the development and optimization of advance methods for its analysis. The candidate should have, or be close to completing, a PhD in an area related to Neuroscience or signal processing (physics, mathematics, engineering, computer sciences). She/He will also have excellent programming skills, particularly in Matlab, a very good background on signal processing and, ideally, experience in neurophysiology recordings. Informal enquiries are welcome and should be made to Prof. Rodrigo Quian Quiroga (rqqg1(a)le.ac.uk) To apply and for more details see: https://ig5.i-grasp.com/fe/tpl_UniversityOfLeicester01.asp?newms=jj&id=1015… Please add a statement of research interests in your cover letter. The closing date for applications is: 25th January 2018. Rodrigo Quian Quiroga Centre for Systems Neuroscience University of Leicester www.le.ac.uk/csn

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Call for Applications - 2018 Nengo Summer School
by Peter Blouw Jan. 4, 2018

Jan. 4, 2018

[All details about this school can be found online at https://www.nengo.ai/summerschool] The Centre for Theoretical Neuroscience at the University of Waterloo is excited to announce a special version of our annual Nengo summer school that will host the* first public access* to *Braindrop*, a new mixed analog-digital neuromorphic chip developed in collaboration with Stanford and Yale. In addition to introducing Braindrop, this two-week school will teach participants to use the Nengo simulation package to build state-of-the-art cognitive and neural models to run both in simulation and on neuromorphic hardware. Nengo provides users with a versatile and powerful environment for designing cognitive and neural systems, and has been used to build what is currently the world's largest functional brain model, Spaun [1]. Nengo is also being used to program a variety of state-of-the-art neuromorphic chips, including Braindrop! For a look at last year's summer school, check out this short video: https://goo.gl/4tVUkQ We welcome applications from all interested graduate students, research associates, postdocs, professors, and industry professionals with a relevant background. [1] Eliasmith, C., Stewart T. C., Choo X., Bekolay T., DeWolf T., Tang Y., Rasmussen, D. (2012). A large-scale model of the functioning brain. Science. Vol. 338 no. 6111 pp. 1202-1205. DOI: 10.1126/science.1225266. [ http://compneuro.uwaterloo.ca/files/publications/eliasmith.2012.pdf] Application Deadline: February 15, 2018 *Format*: A combination of tutorials and project-based work. Participants are encouraged to bring their own ideas for projects, which may focus on testing hypotheses, modeling neural or cognitive data, implementing specific behavioural functions with neurons, expanding past models, or providing a proof-of-concept of various neural mechanisms. Hands-on tutorials, work on individual or group projects, and talks from invited faculty members will make up the bulk of day-to-day activities. A project demonstration event will be held on the last day of the school, with prizes for strong projects! Participants will have the opportunity to learn how to: - interface Nengo with various kinds of neuromorphic hardware - build perceptual, motor, and cognitive models using spiking neurons - model anatomical, electrophysiological, cognitive, and behavioural data - use a variety of single cell models within a large-scale model - integrate machine learning methods into biologically oriented models - interface Nengo with cameras and robotic systems - implement modern nonlinear control methods in neural models - and much more... *Date and Location:* June 3th to June 15th, 2018 at the University of Waterloo, Ontario, Canada. *Applications*: Please visit http://www.nengo.ai/summerschool, where you can find more information regarding costs, travel, lodging, along with an application form listing required materials. If you have any questions about the school or the application process, please contact Peter Blouw (peter.blouw(a)appliedbrainresearch.com) We look forward to hearing from you!

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Call for postdoctoral researcher in Kyoto university: Neuro-imaging with endoscope microscopy
by Hidetoshi Urakubo Jan. 4, 2018

Jan. 4, 2018

Dear Colleagues, We are seeking highly motivated post doctoral researchers working for a project (from 2017 October to 2023 March) developing neuro-imaging with endoscope microscopy to reveal to reveal function of corticostriatal circuit of mouse brain. We require a candidate with solid background on one of the following topics: local circuit model of neurons, neural basis of reinforcement leaning, and signal processing of neuronal activity. For this position, basic qualifications include PhD in relevant fields with proven track record of peer-reviewed publications, as well as excellent verbal and written communication skills in English and/or Japanese. The researcher will participate in the project with our researchers from various backgrounds including computational neuroscience, systems biology, bioinformatics, mathematical engineering, and machine learning. Our laboratory is also collaborating with Advanced Telecommunications Research Institute International (ATR), University of Tokyo, Okinawa institute of science and technology (OIST), RIKEN Brain Science Institute, and other international laboratories. Sincerely, Hidetoshi Urakubo [Job title and Job description] Title is a Full-time Researcher / Full-time Research Engineer Work location is in the main campus of Kyoto University. (Yoshida honmachi 36-1, Sakyo-ku, Kyoto-city, Japan. 606-8501) The contract is annually renewable up to the end of those projects based on the evaluation. Salary will be commensurate with qualifications and experience. Social insurance will be applied. Days off include weekends, public holidays, Year-end and New Year holidays, Foundation Day, and summer vacation. These and other provisions are in accordance with Kyoto University’s regulations. [Application and required documents] Please send the following five materials to the address below, either in printed or electronic form: 1. Complete CV 2. List of publications 3. Reprints of 1 to 3 major publications 4. Document (one or two pages in A4 or letter size) describing: - Summary of your previous research - Interests and proposal for research 5. Two letters of recommendation (including one from the current supervisor, if available) [Selection process] Selection will be made based on application screening and interviews. [Requirements] Applicants must: - have a Ph.D. (or be near completion). - have strong motivations and ambitions to participate in the research above. [Deadline for application] Feb. 15th (will remain open if positions are not filled) [Send application to] Shigeyuki Oba Integrated Systems Biology Laboratory (Prof. Shin Ishii), Graduate School of Informatics, Kyoto University Yoshida-honmachi, Sakyo, Kyoto 606-8501, Japan Email: Shigeyuki Oba <ishii-secr [at] sys.i.kyoto-u.ac.jp> http://ishiilab.jp/kyoto/en/

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Florence Levy Kay Fellow in Philosophy and Neuroscience
by Paul Miller Jan. 2, 2018

Jan. 2, 2018

*Florence Levy Kay Fellow in Philosophy and Neuroscience* *[POSTDOC] BRANDEIS UNIVERSITY*in Waltham, Massachusetts invites applications for a two-year, non-renewable Florence Levy Kay Fellowship in Philosophy and Neuroscience, beginning Fall 2018.The Kay Fellow will be appointed as a faculty member at the rank of lecturer with a joint appointment in Philosophy and Neuroscience. The ideal applicant will have an educational background in philosophy and neuroscience, and a demonstrated ability to foster formal and informal conversations among philosophers, psychologists, and neuroscientists.The postdoctoral fellow will actively pursue his or her own research and teach one course per semester, including a course in Neuro-ethics, while participating in and contributing to the intellectual life of the Philosophy Department, Neuroscience Program and the Brandeis community.Applicants must have a Ph.D. in hand by the start of the fellowship. The fellowship includes a salary of $57,500, plus benefits, with moving expenses (around $1,500), and a research fund of up to $4,000 per year.Questions about the position may be directed to Julie Seeger at jseeger(a)brandeis.edu. Applications, which should be submitted through AcademicJobsOnline at https://academicjobsonline.org/ajo/jobs/10500, should include a CV, a brief statement of research and teaching interests, a succinct writing sample, and three letters of reference.First consideration will be given to applications submitted by January 15, 2018. Brandeis University has a strong institutional commitment to the achievement of excellence and diversity among its faculty, students and staff.Women and underrepresented minority candidates are encouraged to apply.Consideration will also be given to candidates whose experience in teaching, research, or community service has prepared them to contribute to diversity and excellence.Brandeis University is an affirmative action/equal opportunity employer.All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, disability, age or protected veteran status.

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15 Academic Positions at the University of Melbourne
by Uwe Aickelin Jan. 2, 2018

Jan. 2, 2018

[Apologies if you receive multiple copies of this announcement] The University of Melbourne School of Computing and Information Systems is seeking applicants for 15 continuing (i.e. tenure-track / permanent ) Lecturer and Senior Lecturer positions. We seek dynamic academics with expertise in Computer Science or Information Systems who have the potential to build a stellar teaching and research career at Melbourne. The School of Computing and Information Systems is an international research leader in computer science, information systems and software engineering. In this discipline, the School was ranked number 1 in Australia and 13th in the world in the 2016 QS World University Ranking exercise. We are particularly seeking applicants with expertise in the areas of business information systems, health informatics/digital health, software engineering, cybersecurity, or high-performance and distributed systems, but applicants whose work is aligned with any of the research groups in the School are encouraged to apply. Applications close on 15 Jan 2018. The positions are advertised at http://go.unimelb.edu.au/jsp6, where the formal position description and a brochure with more information are available. Contact Karin Verspoor karin.verspoor(a)unimelb.edu.au<mailto:karin.verspoor@unimelb.edu.au> for enquiries and further information.

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Department of Scientific Computing
by Gordon Erlebacher Dec. 31, 2017

Dec. 31, 2017

Dear Colleagues, Florida State State University’s Department of Scientific Computing (DSC; https://sc.fsu.edu) is currently accepting applications for its interdisciplinary Masters and PhD programs. These programs provide graduate students broad and deep knowledge of the fundamental techniques used in computational modeling and data science, significant exposure to at least one application domain, and the opportunity to conduct significant original research in algorithms and/or applications relating to computational and data science,including deep learning and neuroscience. A brief overview of the MS and PhD programs can be found at http://sc.fsu.edu/education . To be considered for funding, the deadline for application for the Fall 2018 cohort is January 15, 2018. Application information can be found at https://www.sc.fsu.edu/graduate/application. Self-funded applicants interested in our one-year MS program are considered throughout the Spring Semester. Please forward this message (and the attached brochure) along to any students that you think might be interested in our graduate program. Requests for more information and questions about the graduate programs or about the Department of Scientific Computing should be addressed to the Graduate Coordinator Dr. Sachin Shanbhag at sshanbhag(a)fsu.edu or to the Chair Gordon Erlebacher (Chair) at gerlebacher(a)fsu.edu. Thank you! Regards, Gordon /Erlebacher ------------- Gordon Erlebacher Chair, Department of Scientific Computing Florida State University https://sc.fsu.edu -- Gordon Erlebacher Chair, Department of Scientific Computing

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BioSystems - Special Issue on Neural Coding 2016 (Vol. 161, November 2017)
by Lubomir Kostal Dec. 31, 2017

Dec. 31, 2017

Dear Colleagues, We would like to announce a BioSystems Special Issue on Neural Coding: BioSystems -- Volume 161 - November 2017 Available online for download now from: https://www.sciencedirect.com/science/journal/03032647/161/supp/C?sdc=1 The Table of Contents of this special issue can be seen at the end of this email. Best wishes for a happy new year, Guest Editors Chris Christodoulou, Lubomir Kostal and Angar Büschges ------------------------------------------------------------------------------------------ ------------------ BioSystems - Contents -- Volume 161 - November 2017 Special Issue: Neural Coding 2016 (Selected papers presented at the Twelventh International Workshop on Neural Coding, Cologne, Germany, 2016) Available online for download now from: https://www.sciencedirect.com/science/journal/03032647/161/supp/C?sdc=1 Editorial Chris Christodoulou, Lubomir Kostal and Angar Büschges To swim or not to swim: A population-level model of Xenopus tadpole decision making and locomotor behaviour Roman Borisyuk, Robert Merrison-Hort, Steve R. Soffe, Stella Koutsikou, Wen-Chang Li Linked Gauss-Diffusion processes for modeling a finite-size neuronal network M. F. Carfora, E. Pirozzi Information reduction in a reverberatory neuronal network through convergence to complex oscillatory firing patterns A. Vidybida, O. Shchur Efficiency of rate and latency coding with respect to metabolic cost and time Marie Levakova A single spike deteriorates synaptic conductance estimation Ryota Kobayashi, Hiroshi Nishimaru, Hisao Nishijo, Petr Lansky Synchrony measure for a neuron driven by excitatory and inhibitory inputs and its adaptation to experimentally-recorded data Christina Zavou, Antria Kkoushi, Achilleas Koutsou, Chris Christodoulou Dynamical properties of LFPs from mice with unilateral injection of TeNT Eleonora Vannini, Matteo Caleo, Santi Chillemi, Angelo Di Garbo Functional data analysis of single-trial auditory evoked potentials recorded in the awake rat Ondřej Pokora, Jan Koláček, Tzai-Wen Chiu, Wei Qiu Upozorneni: Neni-li v teto zprave vyslovne uvedeno jinak, ma tato E-mailova zprava nebo jeji prilohy pouze informativni charakter. Tato zprava ani jeji prilohy v zadnem ohledu ustavy AV CR, v.v.i. k nicemu nezavazuji. Text teto zpravy nebo jejich priloh neni navrhem na uzavreni smlouvy, ani prijetim pripadneho navrhu na uzavreni smlouvy, ani jinym pravnim jednanim smerujicim k uzavreni jakekoliv smlouvy a nezaklada predsmluvni odpovednost ustavu AV CR, v.v.i. Disclaimer: If not expressly stated otherwise, this e-mail message (including any attached files) is intended purely for informational purposes and does not represent a binding agreement on the part of Institutes of CAS. The text of this message and its attachments cannot be considered as a proposal to conclude a contract, neither the acceptance of a proposal to conclude a contract, nor any other legal act leading to concluding any contract; nor does it create any pre-contractual liability on the part of Institutes of CAS.

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Postdoctoral position in quantitative biological modeling
by William L. Kath Dec. 30, 2017

Dec. 30, 2017

We are looking to fill a postdoctoral position in our department through an NSF-funded Research Training Program in Quantitative Biological Modeling. Could you please be so kind as to pass this information along to anyone who would be interested or might know of suitable candidates? Note that NSF requires postdoctoral fellows to be U.S. citizens or permanent residents. More details about the positions and the program are listed below. I've also linked a flyer suitable for printing and posting at http://people.esam.northwestern.edu/~kath/rtg_advertisement_2018.pdf Best regards, - Bill Kath ------------------------------------------------- Postdoctoral Fellowships in Quantitative Biological Modeling Department of Applied Mathematics, Northwestern University Overview: The Department of Engineering Sciences and Applied Mathematics is soliciting applications for a postdoctoral fellowship in quantitative biological modeling that will be available starting September 1, 2018. This position is part of a National Science Foundation Research Training Grant (NSF-RTG). Duties: The postdoctoral fellow will conduct research on the quantitative modeling of biological systems and will teach three quarter courses per year in the department. The position will typically be for three years. The postdoctoral fellow will additionally participate in RTG-related training and career development activities. Environment: The postdoctoral fellow will be part of an interdisciplinary environment focusing on current problems in experimental and computational biology. The fellow will gain experience from training in mathematical modeling, numerical methods, and modern data analysis/statistical tools relevant to biological problems. Research internships outside of Northwestern will broaden the fellow's perspectives. The fellow's research will be mentored by faculty from both applied mathematics and a biological discipline. Ongoing collaborations exist with faculty in Neurobiology, Molecular Biosciences, Environmental Engineering and Preventive Medicine, and additional areas of interest are welcome. An overall goal of the program is to broaden computational biological modeling in the department and at Northwestern. Requirements: Applicants must be U.S. citizens or permanent residents. Interested candidates should submit a curriculum vitae, three reference letters (one addressing teaching qualifications) and brief research and teaching statements online at the URL: https://openposition.mccormick.northwestern.edu/apply/index/NjY= If desired, one or two representative publications may also be submitted. For full consideration applications should be received by January 15, 2018. Northwestern University is an Equal Opportunity, Affirmative Action Employer of all protected classes including veterans and individuals with disabilities. Women and minorities are encouraged to apply. Inquiries about the position may be directed to: Hermann Riecke Engineering Sciences and Applied Mathematics Northwestern University 2145 Sheridan Road Evanston, IL 60208-3125 Phone: (847) 491-3345 Email:h-riecke@northwestern.edu http://www.mccormick.northwestern.edu/applied-math/ -- William L. Kath, Professor Engineering Sciences and Applied Mathematics McCormick School of Engineering, Northwestern University 2145 Sheridan Road, Evanston, IL 60208-3125 Phone: 847-491-8784 Fax: 847-491-2178

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Direct PhD Track - Brain Sciences: Computational and Information Processing
by Nili Vershov Dec. 27, 2017

Dec. 27, 2017

*Direct PhD Track* *Brain Sciences: Computation and Information Processing* Now Accepting Applications from International Students! *Submission Deadline: February 1st, 2018* *For more information:* https://elsc.huji.ac.il/phd-program-computational-neuroscience -- *Nili Vershov* *Ph.D Program C**oordinator * *Edmond and Lily Safra Center for Brain Sciences* *The Hebrew University of Jerusalem* *Tel: +972-26584899 <+972%202-658-4899>* *Cell: +972-507858847 <+972%2050-785-8847>* ------------------------------ This message contains information which may be confidential and privileged. Unless you are the intended addressee (or authorized to receive for the intended addressee), you may not use, copy or disclose to anyone the message or any information contained in the message. If you have received the message in error, please advise the sender by reply and delete the message . To the extent contractual confidentiality obligations exist, this message and all information transmitted with it are designated "Confidential".

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Call for papers & tutorials: PRNI (Pattern Recognition in Neuroimaging) 2018
by Yuvaraj Rajamanickam (Dr) Dec. 27, 2017

Dec. 27, 2017

******* please accept our apologies for cross-posting ******* -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- FIRST CALL FOR PAPERS AND TUTORIALS PRNI 2018: 8th International Workshop on Pattern Recognition in Neuroimaging to be held 12-14 June 2018 at the National University of Singapore, Singapore www.prni.org<https://webmail.ntu.edu.sg/owa/redir.aspx?C=zAsK2tVRfU-VqajW2fbnHXBsaTVlUtU…> - @PRNIworkshop - www.facebook.com/PRNIworkshop/<https://webmail.ntu.edu.sg/owa/redir.aspx?C=zAsK2tVRfU-VqajW2fbnHXBsaTVlUtU…> ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- The 8th International Workshop on Pattern Recognition in Neuroimaging (PRNI) will be held at the Centre for Life Sciences Auditorium, National University of Singapore, Singapore on June 12-14, 2018.Pattern recognition techniques are an important tool for neuroimaging data analysis. These techniques are helping to elucidate normal and abnormal brain function, cognition and perception, anatomical and functional brain architecture, biomarkers for diagnosis and personalized medicine, and as a scientific tool to decipher neural mechanisms underlying human cognition. The International Workshop on Pattern Recognition in Neuroimaging (PRNI) aims to: (1) foster dialogue between developers and users of cutting-edge analysis techniques in order to find matches between analysis techniques and neuroscientific questions; (2) showcase recent methodological advances in pattern recognition algorithms for neuroimaging analysis; and (3) identify challenging neuroscientific questions in need of new analysis approaches. Authors should prepare full papers with a maximum length of 4 pages (two column IEEE style) for double-blind review. The manuscript submission deadline is 04 April 2018, 11:59 pm SGT. Accepted manuscripts will be assigned either to an oral or poster sessions; all accepted manuscripts will be included in the workshop proceedings. Similarly to previous years, in addition to full length papers PRNI will also accept short abstracts (500 words excluding the title, abstract, tables, figure and data legends, and references) for poster presentation. Finally, this year PRNI has an open call for tutorial proposals. A tutorial can take a form of 2h, 4h or whole day event aimed at demonstrating a computational technique, software tool, or specific concept. Tutorial proposals featuring hands on demonstrations and promoting diversity (e.g. gender, background, institution) will be preferred. PRNI will cover conference registration fees for up to two tutors per accepted program. The submission deadline is also 04 April 2018, 11:59 pm SGT. Please see www.prni.org<https://webmail.ntu.edu.sg/owa/redir.aspx?C=zAsK2tVRfU-VqajW2fbnHXBsaTVlUtU…> and follow @PRNIworkshop and www.facebook.com/PRNIworkshop/<https://webmail.ntu.edu.sg/owa/redir.aspx?C=zAsK2tVRfU-VqajW2fbnHXBsaTVlUtU…> for news and details. ________________________________ CONFIDENTIALITY: This email is intended solely for the person(s) named and may be confidential and/or privileged. If you are not the intended recipient, please delete it, notify us and do not copy, use, or disclose its contents. Towards a sustainable earth: Print only when necessary. Thank you.

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Announcing Okinawa/OIST Computational Neuroscience Course 2018
by Erik De Schutter Dec. 25, 2017

Dec. 25, 2017

OKINAWA/OIST COMPUTATIONAL NEUROSCIENCE COURSE 2018 Methods, Neurons, Networks and Behaviors June 25 to July 12, 2018 Okinawa Institute of Science and Technology Graduate University, Japan https://groups.oist.jp/ocnc The aim of the Okinawa/OIST Computational Neuroscience Course is to provide opportunities for young researchers with theoretical backgrounds to learn the latest advances in neuroscience, and for those with experimental backgrounds to have hands-on experience in computational modeling. We invite graduate students and postgraduate researchers to participate in the course, held from June 25th through July 12th, 2018 at an oceanfront seminar house of the Okinawa Institute of Science and Technology Graduate University. Applications are through the course web page (https://groups.oist.jp/ocnc) only; January 1 - February 3, 2018. Applicants will receive confirmation of acceptance in March. Like in preceding years, the 15th OCNC will be a comprehensive three-week course covering single neurons, networks, and behaviors with ample time for student projects. The first week will focus exclusively on methods with hands-on tutorials during the afternoons, while the second and third weeks will have lectures by international experts. The course has a strong hands-on component based on student proposed modeling or data analysis projects, which are further refined with the help of a dedicated tutor. Applicants are required to propose their project at the time of application. There is no tuition fee. The sponsor will provide lodging and meals during the course and provides partial travel support. We hope that this course will be a good opportunity for theoretical and experimental neuroscientists to meet each other and to explore the attractive nature and culture of Okinawa, the southernmost island prefecture of Japan. Invited faculty: • Maxim Bazhenov (University of California San Diego, USA) • Michael Brecht (Bernstein Center for Computational Neuroscience Berlin, Germany) • Erik De Schutter (OIST) • Kenji Doya (OIST) • Shaul Druckmann (Janelia Research Campus, USA) • Karl Friston (Wellcome Trust Centre for Neuroimaging, UCL, UK) • Wulfram Gerstner (École Polytechnique Fédérale de Lausanne, Switzerland) • Michele Giugliano (University of Antwerp, Belgium) • Mitsuo Kawato (ATR, Japan) • Bernd Kuhn (OIST) • Kazuhisa Shibata (Nagoya University, Japan) • Olaf Sporns (Indiana University, USA) • Greg Stephens (OIST) • Tatjana Tchumatchenko (MPI for Brain Research, Frankfurt, Germany) • Krasimira Tsaneva-Atanasova (University of Exeter, UK) • Yoko Yazaki-Sugiyama (OIST)

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COSYNE 2018: Cosyne tutorial session, Travel grants, Registration
by Tomas Hromadka Dec. 23, 2017

Dec. 23, 2017

==================================================== Computational and Systems Neuroscience 2018 (Cosyne) MAIN MEETING 01 - 04 March 2018 Denver, Colorado WORKSHOPS 05 - 06 March 2018 Breckenridge, Colorado www.cosyne.org ==================================================== IMPORTANT DATES Online registration is now open. Travel grant submission is now open. Hotel booking is currently open. Travel grant application deadlines Dec 31, 2017, 11.59PM PST (*Undergraduate* Travel Grant) Jan 17, 2018, 11.59PM PST (Other travel grants) ---------------------------------------------------- COSYNE ---------------------------------------------------- The annual Cosyne meeting provides an inclusive forum for the exchange of empirical and theoretical approaches to problems in systems neuroscience, in order to understand how neural systems function. The MAIN MEETING is single-track. A set of invited talks is selected by the Executive Committee, and additional talks and posters are selected by the Program Committee, based on submitted abstracts. The WORKSHOPS feature in-depth discussion of current topics of interest, in a small group setting. For details on workshop proposals please see below or visit Cosyne.org -> Workshops. Cosyne topics include but are not limited to: neural coding, natural scene statistics, dendritic computation, neural basis of persistent activity, nonlinear receptive field mapping, representations of time and sequence, reward systems, decision-making, synaptic plasticity, map formation and plasticity, population coding, attention, and computation with spiking networks. We would like to foster increased participation from experimental groups as well as computational ones. Please circulate widely and encourage your students and postdocs to apply. ---------------------------------------------------- COSYNE TUTORIAL SESSION ---------------------------------------------------- This year, Cosyne is hosting its first tutorial session. The tutorial on "Statistical models for neural data: from GLMs to latent variables" will be given by Jonathan Pillow on 01 March, before the main meeting starts. Space is limited. You can register for the tutorial when registering for the main meeting. For details on the tutorial and registration, see Cosyne.org -> Tutorial and Cosyne.org -> Registration. ----------------------------------------------- TRAVEL GRANTS ----------------------------------------------- Applications are now open for travel grants to attend the conference. Each awardee will receive at least $500 to help offset the costs of travel, registration, and accommodations. Larger grants may be available to those traveling from outside North America. Special consideration is given to scientists who have not previously attended the meeting, under-represented minorities, students who are attending the meeting together with a mentor, undergraduate students, and authors of submitted Cosyne abstracts. We currently offer five travel grant programs for New Attendees, Presenters, Mentors, Undergraduates, and Childcare travel grants. For details on applying, see Cosyne.org -> Travel grants. COSYNE SPEAKERS Tim Behrens (Oxford) Josh Berke (UCSF) Tiago Branco (UCL) Jessica Cardin (Yale) Claudia Clopath (Imperial) Marlene Cohen (Pittsburgh) Iain Couzin (Max-Planck) Carina Curto (Penn State) Ann Graybiel (MIT) Vivek Jayaraman (Janelia) Mate Lengyel (Cambridge) Joni Wallis (Berkeley) Byron Yu (CMU) ORGANIZING COMMITTEE General Chairs: Ilana Witten (Princeton) and Eric Shea-Brown (U Washington) Program Chairs: Linda Wilbrecht (Berkeley) and Brent Doiron (U Pittsburgh) Workshop Chairs: Laura Busse (LMU) and Ralf Haefner (U Rochester) Undergraduate Travel Chairs: Angela Langdon (Princeton) and Robert Wilson (U Arizona) Publicity Chair: Il Memming Park (Stony Brook) Development Chair: Michael Long (NYU) EXECUTIVE COMMITTEE Stephanie Palmer (U Chicago) Zachary Mainen (Champalimaud) Alexandre Pouget (U Geneva) Anthony Zador (CSHL) CONTACT meeting [at] cosyne.org COSYNE MAILING LISTS Please consider adding yourself to Cosyne mailing lists (groups) to receive email updates with various Cosyne-related information and join in helpful discussions. See Cosyne.org -> Mailing lists for details.

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EPSRC funded PhD in Computational/Mathematical Neuroscience (funded for UK students)
by James Rankin Dec. 21, 2017

Dec. 21, 2017

*3 EPSRC funded PhD positions in Computational & Mathematical Neuroscience* UK students (or students who have spent last 3 years in UK) fully funded (fees and stipend) EU students partially funded (fees but no stipend) International students not eligible *Application deadline: 10th January 2018* Starting: September 2018 The studentships will provide funding for a stipend which is currently £14,553 per annum for 2017-2018. It will provide research costs and UK/EU tuition fees at Research Council UK rates for 42 months (3.5 years) for full-time students, pro rata for part-time students. * Cortical network models to understand differential input response properties during active and silent states* Supervisors: Dr James Rankin and Dr Mick Craig (Medical School, Exeter) http://www.exeter.ac.uk/studying/funding/award/?id=2903 * Determination of parameter dependencies across diverse populations of neuronal and excitable cells* Supervisors: Dr James Rankin and Dr Joel Tabak (Medical School, Exeter) http://www.exeter.ac.uk/studying/funding/award/?id=2932 *The neural circuitry mediating multisensory integration in Platynereis larvae* Supervisors: Dr James Rankin and Prof Gáspár Jékely (Living Systems Institute, Exeter) http://www.exeter.ac.uk/studying/funding/award/?id=2901 Apply through links above or contact pgrenquiries(a)exeter.ac.uk or j.a.rankin(a)exeter.ac.uk directly with any questions. -- http://emps.exeter.ac.uk/mathematics/staff/jar226

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Groningen Spring School on Cognitive Modeling 2018
by Jelmer Borst Dec. 20, 2017

Dec. 20, 2017

Third Groningen Spring School on Cognitive Modeling – ACT-R, Nengo, PRIMs, & Accumulator Models – Date: April 9-13, 2018 Location: Groningen, the Netherlands Fee: € 250 (late fee after January 31 will be € 300) More information and registration: www.cognitive-modeling.com/springschool <http://www.cognitive-modeling.com/springschool> We are happy to announce the third Groningen Spring School on Cognitive Modeling (April 9-13, 2018). As in previous years, it will cover four different modeling paradigms: ACT-R, Nengo, PRIMs, and Accumulator models. It thereby offers a unique opportunity to learn the relative strengths and weaknesses of these approaches. See the attached flyer for more information about the paradigms. Each day will consist of four theory lectures, one on each modeling paradigm. Each paradigm also includes hands-on assignments. Although students are free to choose the number of lectures they attend, we recommend students to sign up for lectures on two of the paradigms, and complete the tutorial units for one of the paradigms. At the end of each day there will be a plenary research talk, to show how these different approaches to modeling are applied. The Spring School will be concluded with a keynote lecture and a conference dinner. This year we also offer the opportunity for project students to attend. The idea is that you have attended the spring school in an earlier year and now come back in the week of the spring school to work on your own modeling project under our supervision. Admission is limited, so register soon! We are looking forward to seeing you in Groningen! Niels Taatgen Jelmer Borst Marieke van Vugt Terry Stewart & Katja Mehlhorn

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Postdoctoral Swartz Fellowship Positions in Theoretical and Computational Neuroscience at Yale University
by Murray, John Dec. 20, 2017

Dec. 20, 2017

The Swartz Center in Theoretical Neurobiology at Yale University invites applications for up to two postdoctoral positions in Theoretical and Computational Neuroscience, with start date mid or late 2018. Competitive candidates include those with a strong quantitative background who wish to gain neuroscience research experience. We especially encourage candidates with an interest in collaborating directly with experimental neuroscientists. The candidates will be expected to perform theoretical/computational studies relevant to one or more laboratories of the Yale Swartz Center (https://medicine.yale.edu/neuroscience/swartz/corelabs.aspx) and will be encouraged to participate in an expanding quantitative biology environment. Candidates must hold a Ph.D. or equivalent degree. Please send a Curriculum Vitae, selected reprints, names of those whom we can contact for a reference, and a statement of research plans including the laboratories of interest. All application materials should be sent electronically to the following e-mail address: john.murray at yale.edu <mailto:john.murray at yale.edu>. Applications will be reviewed as they are received, but priority will be given to those received on or before January 20th 2018. For any questions, please contact John Murray <mailto:john.murray at yale.edu>. Yale University is an affirmative action/equal opportunity employer. Yale values diversity in its faculty, students, and staff and especially welcomes applications from women and underrepresented minorities. http://neurojobs.sfn.org/jobs/10584092/ John D. Murray ----------------------------------------------- Assistant Professor Department of Psychiatry Yale University School of Medicine murraylab.yale.edu<http://murraylab.yale.edu/> -----------------------------------------------

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Assoc Prof and lectureships in Data Science and Predictive Modelling
by Bruce Graham Dec. 19, 2017

Dec. 19, 2017

Dear all, We have 3 new posts at the University of Stirling in Scotland (in addition to 3 posts in Cyber-security, advertised recently and still open for applications). The new posts are an Associate Professor and 2 lecturers in Data Science and Predictive Modelling and are part of an exciting new University of Stirling initiative to strengthen our Computing Science and Mathematics capabilities and collaborations between our Data Science and Biological Modelling research groups and strengthen our related research and teaching. Mathematicians, as well as computer scientists or related disciplines, are particularly encouraged to apply. Computational neuroscience, machine learning, neural networks and other topics of interest to this mailing list fall within the remit of these posts. For complete details and how to apply, please see: https://www.stir.ac.uk/about/jobs/ Closing date is 21st January 2018. For informal enquiries, please email me directly. Best regards, Bruce Graham -- Prof. Bruce Graham (b.graham(a)cs.stir.ac.uk) Professor of Computing Science and Research Director Computing Science and Mathematics Faculty of Natural Sciences University of Stirling Stirling FK9 4LA phone: +44 1786 467 432 fax: +44 1786 464 551 Coauthor of "Principles of Computational Modelling in Neuroscience", CUP 2011. Editorial Board of Journal of Biological Dynamics.

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Post-doctoral research associate post in Computational Neuroscience, and PhD studentship in Computational Neuroimaging available
by Wong-Lin, Kongfatt Dec. 19, 2017

Dec. 19, 2017

1. A BBSRC funded post-doctoral research associate post in Computational Neuroscience is available at Ulster University, UK. The research project, in collaboration with The University of Oxford, is focused on analyzing and modelling serotonin and related brain systems. For more info, please see: <https://lnkd.in/eDsv3_i> https://atsv7.wcn.co.uk/search_engine/jobs.cgi?SID=amNvZGU9MTcwMzk4MyZ2dF90… 2. A fully funded Ph.D. studentship in Computational Neuroimaging of Dementia is available at Ulster University. The research project involves close collaboration with academics, clinicians and industrial partners. For more info, please see: <https://lnkd.in/e3scQ_H> https://www.ulster.ac.uk/doctoralcollege/find-a-phd/238180 Please contact me for more information if interested in the post/studentship. Best KongFatt Wong-Lin -------------------------------- E-mail: k.wong-lin(a)ulster.ac.uk https://www.ulster.ac.uk/staff/k-wong-lin This email and any attachments are confidential and intended solely for the use of the addressee and may contain information which is covered by legal, professional or other privilege. If you have received this email in error please notify the system manager at postmaster(a)ulster.ac.uk and delete this email immediately. Any views or opinions expressed are solely those of the author and do not necessarily represent those of Ulster University. The University's computer systems may be monitored and communications carried out on them may be recorded to secure the effective operation of the system and for other lawful purposes. Ulster University does not guarantee that this email or any attachments are free from viruses or 100% secure. Unless expressly stated in the body of a separate attachment, the text of email is not intended to form a binding contract. Correspondence to and from the University may be subject to requests for disclosure by 3rd parties under relevant legislation. The Ulster University was founded by Royal Charter in 1984 and is registered with company number RC000726 and VAT registered number GB672390524.The primary contact address for Ulster University in Northern Ireland is Cromore Road, Coleraine, Co. Londonderry BT52 1SA

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Python Exercises and Online textbook: Neuronal Dynamics
by Wulfram Gerstner Dec. 19, 2017

Dec. 19, 2017

We have now finished a series of Python exercises for the book 'Neuronal Dynamics - from single neurons to populations and Models of Cognition' by Gerstner-Kistler-Naud-Paninski (Cambridge Univ. Press) To go directly to the exercises, click here http://neuronaldynamics.epfl.ch/exercises.html An html online version of the book for students (as well as some teaching material for lecturers) is available here: http://neuronaldynamics.epfl.ch <http://neuronaldynamics.epfl.ch/index.html> The pdf of the e-book and printed versions of the book are available via Amazon or Cambridge Univ. Press. The series of exercises has been tested in classes at the EPFL, but we thought that they might be also useful for students at other places, best regards Wulfram Gerstner, Alex Seeholzer, Marco Lehmann EPFL, Switzerland

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Open position: Coordinator Scientific Computing at Research Center Juelich, Germany
by Martina Reske Dec. 19, 2017

Dec. 19, 2017

Dear Comp-Neuro community The Institute of Neuroscience and Medicine (INM) investigates the structure and function of the human brain on different spatial and temporal scales within the research program “Decoding the Human Brain”. The brain’s high complexity and plasticity over the lifespan of an individual, as well as changes during neuropsychiatric disorders, requires the use of innovative imaging methods and supercomputing technology. Basic neuroscience research heavily relies on modeling and simulation, which are necessary to approach the brain’s immense complexity, manage the huge amount of resulting data, and develop reliable control techniques. Acquired knowledge allows for the translation of basic findings into clinical applications to better understand neurological and psychiatric disorders, to refine diagnostic processes, and to develop therapy strategies – crucial tasks we have to face in ageing societies. The department INM-6, Computational and Systems Neuroscience, develops mathematical models of neuronal dynamics and function. We are active in neuromorphic computing and develop simulation technologies and analysis tools. We are looking to recruit a Coordinator Scientific Computing Your Job: * Design and continuous advancement of a roadmap for scientific computing with regard to hard- and software * Designing a cloud infrastructure and digitized workflows in theoretical neuroscience * Studying international developments in hard- and software in the fields of simulation and data science in neuroscience * Planning, purchasing, set-up and management of UNIX, Linux, Mac OS and Windows systems, communication systems and software * Support of institute’s databases and online tools (webdav, git, wordpress, website); user management * Further development of simulation and analysis codes with regard to system near aspects * Measurement of energy-to-solution and time-to-solution of simulations and analysis codes for scientific studies * Direct support of scientists * Participation in working group leaders’ meeting * Participation in relevant IT committees at Forschungszentrum Juelich * Participation in educating staff in HPC aspects Your Profile: * Completed study of informatics, mathematics or physics * Substantial expertise in C, C++ and Python * Substantial knowledge of UNIX, Windows and Mac OS * Experience with administration of HPC clusters, file, web and print servers as well as with parallel computing (ideally in neuroscience) * Beneficial: Basic knowledge of neuroscience concepts * Ability and willingness to work independently and proactively * Confident appearance and ability to work cooperatively in an interdisciplinary environment * Good interpersonal and communication skills * Structured and systematic working style * Fluent in English (spoken and written) Our Offer: * International, interdisciplinary working environment on an attractive research campus, ideally situated between the cities of Cologne, Düsseldorf, and Aachen * A comprehensive further training Programme * Flexible working hours and various opportunities to reconcile work and family life * Limited for 2 years with possible longer-term prospects * Salary and social benefits in conformity with the provisions of the Collective Agreement for the Civil Service (TVöD) Forschungszentrum Jülich aims to employ more women in this area and therefore particulary welcomes applications from women. We also welcome applications from disabled persons. We look forward to receiving your application, preferably online<https://www.hrecruiting.de/obf2/bewerbermanagement.php?kunden_nr=t5ChjatkIf…> via our online recruitment system on our career site, quoting the reference number 2017-321. Contact Human Resource Development and Recruiting Kristin Lux Tel.:+49 2461 61 9700 -- Dr. Martina Reske Scientific Coordinator Institute of Neuroscience and Medicine (INM-6) Computational and Systems Neuroscience & Institute for Advanced Simulation (IAS-6) Theoretical Neuroscience Jülich Research Centre and JARA Jülich, Germany Work +49.2461.611916 Work Cell +49.151.26156918 Fax +49.2461.619460 www.csn.fz-juelich.de<http://www.csn.fz-juelich.de> ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Juelich GmbH 52425 Juelich Sitz der Gesellschaft: Juelich Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Dr. Karl Eugen Huthmacher Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender), Karsten Beneke (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt, Prof. Dr. Sebastian M. Schmidt ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------

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Operations Research in Neuroscience, Special Issue of Annals of Operations Research
by Ruben A. Tikidji-Hamburyan Dec. 19, 2017

Dec. 19, 2017

Dear colleagues, [apologies for any crossposting] I would like to bring your attention to the special issue on applications of *Operations Research in Neuroscience* recently published in* Annals of Operations Research* Volume *258* Number 1 (Springer). ISSN: 0254-5330 (Print) 1572-9338 (Online) The volume is available online: https://link.springer.com/journal/10479/258/1?wt_mc=alerts.TOCjournals Please find the table of contents below. After a positive response from the journal and the publisher, we are planning to announce another special issue (SI) on the same topic in the same journal early next year. Please let me know if you are interested in contributing to this SI. Best Regards, Ruben ---- Ruben Tikidji-Hamburayn, Ph.D. =================================================================================== Preface *Operations research in neuroscience* Erik Kropat, Ruben A. Tikidji-Hamburyan… Pages 1-4 OR in Neuroscience *A bi-objective network design approach for discovering functional modules linking Golgi apparatus fragmentation and neuronal death* Eduardo Álvarez-Miranda, Hesso Farhan, Martin Luipersbeck… Pages 5-30 OR in Neuroscience *Voxel-MARS: a method for early detection of Alzheimer’s disease by classification of structural brain MRI* Alper Çevik, Gerhard-Wilhelm Weber, B. Murat Eyüboğlu… Pages 31-57 OR in Neuroscience *A semi-supervised inattention detection method using biological signal* Yerim Choi, Jonghun Park, Dongmin Shin Pages 59-78 OriginalPaper *Structure preserving integration and model order reduction of skew-gradient reaction–diffusion systems* Bülent Karasözen, Tuğba Küçükseyhan, Murat Uzunca Pages 79-106 OR in Neuroscience *Totally model-free actor-critic recurrent neural-network reinforcement learning in non-Markovian domains* Eiji Mizutani, Stuart Dreyfus Pages 107-131 OR in Neuroscience *A comparative stationarity analysis of EEG signals* V. Rasoulzadeh, E. C. Erkus, T. A. Yogurt, I. Ulusoy… Pages 133-157 OR in Neuroscience *Anti-periodic solutions for state-dependent impulsive recurrent neural networks with time-varying and continuously distributed delays* Mustafa Şaylı, Enes Yılmaz Pages 159-185

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Postdoc position in Bristol
by Cian O'Donnell Dec. 18, 2017

Dec. 18, 2017

A postdoctoral position is available to work on statistical analysis and computational modelling of large-scale two-photon imaging data of neural population activity from rodent neocortex. This work is part of a Simons Foundation-funded project that seeks to compare the fidelity and stability of neural coding of sensory stimuli between wild-type mice and Fragile-X Syndrome mouse models. The project is a collaboration between the computational neuroscience group of Cian O’Donnell at University of Bristol (http://seis.bris.ac.uk/~co15268) where you will be based, and the experimental neuroscience group of Carlos Portera-Cailliau at University of California, Los Angeles (https://porteralab.neurology.ucla.edu) You will be part of the growing Bristol Computational Neuroscience Unit (http://www.bris.ac.uk/engineering/research/computational-neuroscience; faculty Rui Costa, Conor Houghton, Nathan Lepora, Naoki Masuda, Rosalyn Moran, and Cian O'Donnell). You should ideally have a PhD in Computational Neuroscience or Machine Learning/Statistics, but we will also accept applications from candidates with PhDs in related disciplines such as Neuroscience, Physics, Mathematics, or Engineering. This post is offered on a full time, open-ended contract with funding for up to 18 months in the first instance. You should be able to start on or before April 2018. Please email Cian O’Donnell (cian.odonnell(a)bristol.ac.uk<mailto:cian.odonnell@bristol.ac.uk>) for informal enquires. More application details here: http://www.jobs.ac.uk/job/BGN179/research-associate-senior-research-associa….

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Open letter: A commitment to open source in neuroscience
by Andrew Davison Dec. 18, 2017

Dec. 18, 2017

Dear colleagues, We would like to point the members of this list to an initiative which resulted from a workshop on collaborative model development <https://www.janelia.org/you-janelia/conferences/collaborative-development-d…> at Janelia Research Campus. A number of participants agreed to sign an open letter committing to releasing as open source all the software they develop for data analysis and modelling in their publications (whether or not the article is specifically about the software). The letter and current signatories can be found here: http://opensourceforneuroscience.org/ <http://opensourceforneuroscience.org/> A NeuroView article describing this initiative has just been published in Neuron: A Commitment to Open Source in Neuroscience <http://www.cell.com/neuron/fulltext/S0896-6273(17)30981-9>. While many on this list are already sold on the idea of making their own code publicly available, there is another significant statement in the open letter: "If and when asked to serve as peer-reviewers, we will henceforth ask authors about the availability of any code they have developed for data analysis and modelling which is essential to reproducing the results of their paper and require that this be shared publicly upon acceptance." We hope that this public commitment will make it clear to the wider neuroscience community that trying to publish work on the assumption that they will not have to release their code will become more and more difficult, and that the sooner they plan to make it available the better for them and for the wider field. Regards, Padraig Gleeson Andrew P. Davison R. Angus Silver Giorgio A. Ascoli

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Open position at Institute of Neuroinformatics (Zürich) / Institute of Neuroscience Paris Saclay (Orsay)
by Nicolas Giret Dec. 18, 2017

Dec. 18, 2017

*PhD or Post-Doc for neuroscientist or engineer: neural population activity associated with a complex learned behavior* Dear all, We have an open position for a PhD student or Post-Doc at the interface of engineering and neuroscience. This is a collaborative effort between the Institute of Neuroinformatics (ETH Zurich, University of Zurich) and the Neuroscience Paris Saclay Institute (CNRS, Université Paris Sud, Université Paris Saclay). The goal of our collaboration is to study the principles of vocal learning and communication in songbirds. We combine diverse experimental and theoretical approaches to gain new insights into higher cognitive functions associated with complex vocal behaviors such as song learning. We are interested in decoding neural activity associated with song production and song learning in songbirds. We have recently developed a system for simultaneously recording from many neurons in freely behaving animals. Our miniature lightweight motorized 32-channel recording device incorporates novel carbon fiber electrodes, as described in (Guitchounts, Markowitz, Liberti, & Gardner, 2013). The project is to refine and put this technology to use to study the mysteries of neural population codes and to advance our understanding of how individual neurons contribute to forming a representation of motor plans and of sensory feedback. The engineering part of the work will be done in Zürich, Switzerland (~1/3) and the testing will be done in Orsay, France (~2/3). We are looking either for a PhD student (CHF 47040 starting salary, ~40 200€) or a Post-doc (CHF 80000 starting salary 100%, ~68 500€). Depending on the required training of the post-doc, the employment percentage is reduced to a value between 70 and 90%. Your Profile: You have a MSc degree in neuroscience, electrical engineering, physics, mathematics, biology, or computer science or you have a PhD in neuroscience or engineering. You are strongly interested in neuroscience. You have expertise in signal processing and machine learning. You like to collaborate with biologists and engineers in a nurturing environment. You can work independently and want to be part of a team that fosters flexibility and innovation. The ETH is an equal opportunity employer, we believe in people and their ability to innovate. If you want to apply for this position, feel inspired to send your application material to Prof. Richard Hahnloser (rich(a)ini.ethz.ch <mailto:rich@ini.ethz.ch>) and to Dr Nicolas Giret (nicolas.giret(a)u-psud.fr <mailto:nicolas.giret@u-psud.fr>). It would be great if you could circulate it around in your institute. Best regards, -Nicolas Giret- -- *Chargé de Recherche CNRS* Institut des Neurosciences Paris Saclay, UMR9197 <http://neuro-psi.cnrs.fr/> Université Paris Sud, Univ. Paris Saclay, bât. 446 Rue Claude Bernard 91405 Orsay cedex France 00331.69.15.49.75 Personal website <https://sites.google.com/site/nicolasgiret/>

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[jobs] Postdoctoral Research Fellow position in machine learning / robotics / computational neuroscience at QUT funded by Asian Office of Aerospace Research and Development (AOARD)
by Michael Milford Dec. 18, 2017

Dec. 18, 2017

We are seeking a Postdoctoral Research Fellow to continue research at QUT on the Asian Office of Aerospace Research and Development (AOARD)-funded research project "An infinitely scalable learning and recognition network". The role involves developing neuroscience-based machine learning systems to create highly compressible and scalable learning and recall systems for autonomous systems. In particular, we are modelling the multi-scale, periodic encoding properties of grid cells found in the mammalian brain to create sub-linear scaling mapping and localization systems, and then expanding these systems into other sensory domains including sound. The project has collaborative partners at Harvard and Uni Notre Dame in neuroscience, computer vision and machine learning. The role requires strong mathematical, machine learning, computer vision and large dataset processing skills, as well as paper writing and oral presentation experience. This appointment will be offered on a fixed- term, full-time basis for 1 (one) year. Pending further funding outcomes, the appointment may be extendable by another year. Apply and Enquiries To express an interest in the role or for any enquiries, please e-mail michael.milford(a)qut.edu.au<mailto:michael.milford@qut.edu.au> with the subject line "infinitemapping" and include: - a one page cover letter detailing your interest in and experience for the role, and the earliest date you could feasibly start, - a detailed resume including details of past research, and - a link to your Google Scholar profile. Applications close January 15th 2018. Best regards, Michael Milford Professor of Robotics, Queensland University of Technology

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EPFL: faculty position in computational neuroscience
by Wulfram Gerstner Dec. 14, 2017

Dec. 14, 2017

The School of Life Sciences of the Ecole Polytechnique Fédérale de Lausanne (EPFL) invites applications for an Assistant Professor (tenure track) position in Computational Neuroscience. In exceptional cases, appointment at the level of associate or full professor may also be considered. for details see: https://professeurs.epfl.ch/page-152604-fr.html Kind regards Wulfram Gerstner E-mail for enquiries regarding this position: bmi-search2(a)epfl.ch <mailto:bmi-search2@epfl.ch>

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CFP: Special Session on “Neural Models for Behavior IJCNN 2018
by Pablo Barros Dec. 14, 2017

Dec. 14, 2017

Call for papers: special session on “Neural Models for Behavior Recognition” at IJCNN 2018 - http://www.ecomp.poli.br/~wcci2018/ International Joint Conference on Neural Networks, hosted at IEEE World Congress on Computational Intelligence (IEEE WCCI 2018) 8-13 July 2018, Rio de Janeiro, Brazil Special Session on Neural Models for Behavior Recognition Organized by: Pablo Barros (Universität Hamburg, Germany), Bruno Fernandes (Universidade de Pernambuco, Brazil) and Stefan Wermter (Universität Hamburg, Germany) Categorizing and, to a certain degree, understanding human behavior is an important skill for autonomous systems. A robot able to identify whether a person needs help, an autonomous car to perceive whether a pedestrian is crossing the road, or a camera to localize someone in danger need a robust and reliable human behavior understanding. Although many different solutions have appeared in the past years, most of them do not take longer contextual information into consideration, usually only relying on instantaneous or short-context scenarios which limits the applicability of such systems in a real-world scenario. The potential of having neural models that take into consideration contextual information is substantial and it would be beneficial to develop this technology further for this field. To have a system which is capable of learning, understanding and generalizing human behavior within a longer contextual scene is a challenging task. With recent neural computing technologies, such as training and understanding deep neural networks, life-long learning and unsupervised approaches, to name a few, we believe that autonomous systems which are capable of learning from long-context human behavior are feasible. This kind of processing would provide contextual information which would be beneficial to understanding and acting in real-world scenarios. We invite papers on both practical and theoretical issues about neural learning for behavior recognition. In particular, topics of interest include, but are not limited to: - Gesture processing, recognition and/or generation - Models for emotional behavior analysis and/or understanding - Speech based sentiment analysis and/or dialog processing - Action recognition and/or generation - Crossmodal human behavior learning - Temporal architectures for human behavior learning - Emotional feedback and modulation in decision-making processes - Life-long learning for human behavior processing Submitted papers will be reviewed according to the IJCNN reviewing process and will be evaluated on their scientific value: originality, correctness, and writing style. More details: http://www.ecomp.poli.br/~wcci2018/submissions/#papersubmission IMPORTANT DATES: Paper submission: 15th January 2018 Paper acceptance: 15th March 2018 Final paper submission: 1st May 2018 Early registration: 1st May 2018 IEEE WCCI 2018 conference: 8-13 July 2018 Dr. rer. nat. Pablo Barros Knowledge Technology Department of Informatics University of Hamburg barros at informatik.uni-hamburg.de https://www.inf.uni-hamburg.de/en/inst/ab/wtm/people/barros.html https://www.informatik.uni-hamburg.de/wtm/ -- Dr.rer.nat. Pablo Barros Research Associate Knowledge Technology Department of Informatics University of Hamburg Vogt-Koelln-Str. 30 22527 Hamburg, Germany Phone: +49 40 42883 2535 Fax: +49 40 42883 2515 barros at informatik.uni-hamburg.de https://www.inf.uni-hamburg.de/en/inst/ab/wtm/people/barros.html www.knowledge-technology.info

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PhD studentship in Biocomputation Research Group, Centre for Computer Science and Informatics Research, University of Hertfordshire
by Shabnam Kadir Dec. 14, 2017

Dec. 14, 2017

Applications are invited for a *PhD studentship* on *Computational frameworks for high-dimensional neural data* with *Dr. Shabnam Kadir *in the *Biocomputation Research Group* in the Centre for Computer Science and Informatics Research, University of Hertfordshire, U.K. *Project Description* New developments in experimental technology have led to petabytes of raw data being produced by experimental neuroscientists, which are increasingly publicly available, e.g. Allen Institute data http://www.brain-map.org/. In particular, we are in the realm where population recordings of tens of thousands of neurons are feasible thanks to, e.g. a new generation of large dense probes for electrophysiological recordings, imaging using 2-photon microscopy coupled with calcium fluorescent sensors. Large scale neuronal recordings require novel approaches for both processing and quantitative analysis. As well as using techniques from high-dimensional statistics, machine learning, information theory, we aim to explore new approaches from mathematical fields outside statistics, such as algebraic topology. The study of networks is a particularly important topic in neuroscience: neurons communicate with each other electrically via synapses, forming intricate networks. These networks can be studied using techniques from computational topology (e.g. persistent homology, clique topology). These could be used to extract information about subnetworks and assemblies, both from large scale recordings, and via connectomics derived from simulations (Blue Brain Project). We aim in this project to go beyond spike sorting and develop new tools and computational frameworks which would help interpret high dimensional data and interrogate how information is being processed by the brain, e.g. How are sensory stimuli (location in environment, visual and auditory stimuli) encoded? How can we characterise the neural activity associated with memory, attention, decision making and motor control? We shall be collaborating with labs at Imperial, Pennsylvania State University and UCL. More information can be found here: http://www.herts.ac.uk/_ _data/assets/pdf_file/0003/187455/Dec2017-computational-frameworks-for-high- dimensional-neural-data.pdf *Requirements * We are looking for candidates with the following profile: - Strong first degree in a quantitative field such as mathematics, physics, computer science, engineering, computational neuroscience. - Strong programming skills (e.g. Python, MATLAB, C++). - Interest in neuroscience and biology would be helpful. A studentship from the PhD Programme in Computer Science provides approximately £14,550 per annum bursary plus the payment of student fees. Applicants from outside the UK or EU are eligible. Research in Computer Science at the University of Hertfordshire has been recognised as excellent in the latest Research Excellence Framework Assessment, with 50% of the research submitted rated as internationally excellent or world-leading. The Centre for Computer Science and Informatics Research provides a very stimulating environment, offering a large number of specialised and interdisciplinary seminars as well as general training and researcher development opportunities. The University is situated in Hatfield, in the green belt just north of London. Please contact *Dr Shabnam Kadir* (shabnam.kadir(a)imperial.ac.uk) for informal enquiries. Application forms are available under http://www.herts.ac.uk/apply/schools-of-study/computer-science/our-research/ the-phd-programme-in-computer-science and should be returned to Mrs Lorraine Nicholls and Mrs Emma Thorogood, Research Student Administrators, University of Hertfordshire, College Lane, Hatfield, Herts, AL10 9AB, Tel: 01707 286083, doctoralcollegeadmissions(a)herts.ac.uk. The short-listing process will begin on 8 January 2018. The earliest start date will be mid-April 2018. -- ---------------------------------------------------------------------------------------------------------------- Dr. Shabnam Kadir Department of Bioengineering Imperial College London Royal School of Mines Exhibition Road London, SW7 2AZ United Kingdom ----------------------------------------------------------------------------------------------------------------

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Connectome to Behaviour Discussion Meeting, London January 29th-31st 2018
by Stephen Larson Dec. 13, 2017

Dec. 13, 2017

Hi all, The Royal Society is hosting a 2-day discussion meeting on the topic of *Connectome to behaviour: modelling C. elegans at cellular resolution*. The meeting is an interdisciplinary look at the future of data collection for and simulation of the only complete adult nervous system that has been mapped at EM resolution. Free registration is available on the website: https://royalsociety.org/science-events-and-lectures/2018/01/mind-of-a-worm/ Additional events related to the OpenWorm Foundation (http://openworm.org) will occur the day following the discussion meeting, also in London. More details available here: http://blog.openworm.org/post/168271424220/royal-society-meeting-open-house… Please register for any events you plan to attend so we can get a good head count. I hope to see you in London! Best, Stephen -- Stephen D. Larson, Ph.D OpenWorm Project Director http://openworm.org

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Complex Oscillatory Systems conference AMCOS, Barcelona March 2018 - 1 week until abstract submission deadline!
by AMCOS Conference Dec. 13, 2017

Dec. 13, 2017

*ONLY 1 WEEK UNTIL ABSTRACT SUBMISSION DEADLINE* *AMCOS – ANALYSIS AND MODELING OF COMPLEX OSCILLATORY SYSTEMS* March 19-23, 2018 Barcelona, Spain The *AMCOS conference* aims at bringing together renowned experts and young researchers who work on the modeling of complex systems and the emergence of collective phenomena, as well as on the analysis of complex data sets in order to infer structure and functionality of networks. Accompanying TUTORIALS by leading experts will interactively introduce the different conference themes. Do you want to present your work? *Abstract submission deadline is in 1 week**.* More info at amcosconference.com. *DATE AND VENUE* March 19, 2018 March 20 - 23, 2018 PRBB <http://www.prbb.org/>, Biomedical Research Park of Barcelona *KEYNOTE SPEAKERS* - Leon Glass, - Damian H. Zanette. *LIST OF SPEAKERS (*TBC)* - Peter Ashwin, - Ernest Barreto, - Ginestra Bianconi*, - Raffaella Burioni, - Dante R. Chialvo, - Gustavo Deco, - Albert Díaz-Guilera, - Jordi Garcia-Ojalvo, - Wulfram Gerstner*, - Sonja Grün, - Cristina Masoller, - Yamir Moreno, - Florian Mormann, - Hiroya Nakao, - Diego Pazó , - Juan G. Restrepo , - Alex Roxin, - Tilo Schwalger. *TOPICS COVERED* synchronization and nonlinear dynamics - dynamics on networks - connectivity and network inference - data analysis in neuroscience - critical phenomena - neural field models - computational neuroscience - complex oscillatory behaviour in physiology *TUTORIALS* Leading experts in the field will introduce the different conference themes interactively in tutorials on the first day of the conference week. The speakers are: - Ralph G. Andrzejak, - Arkady Pikovsky, - Michael Rosenblum, - Aneta Stefanovska. A (tentative) list of topics comprises basic theory of synchronization, synchronization approach to data analysis, basic concepts of nonlinear time series analysis, and time series analysis of non-autonomous dynamics. The participants are required to bring laptops installed with MATLAB/Octave if they want to take part in the practical activities. ORGANIZERS The doctoral students (Early Stage Researchers <http://www.uni-potsdam.de/cosmos-itn/people/early-stage-researchers-esrs/>) of the H2020 Marie Curie project COSMOS <http://www.uni-potsdam.de/cosmos-itn/>. For further information see amcosconference.com or contact us via e-mail <amcosconference(a)upf.edu>. Please forward to anyone interested. Follow us on social media. Twitter: @amcosconference <https://twitter.com/amcosconference> Facebook: amcosconference <https://www.facebook.com/amcosconference/>

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RaPID-2 2018 Workshop @ LREC: Resources and ProcessIng of linguistic, para-linguistic and extra-linguistic Data from people with various forms of cognitive/psychiatric impairments
by Dimitrios Kokkinakis Dec. 13, 2017

Dec. 13, 2017

[Apologies if you receive multiple copies] *2nd Call for Papers* RaPID 2018: "*Resources and ProcessIng of linguistic, para-linguistic and extra-linguistic Data from people with various forms of cognitive/psychiatric impairments*" Half-day workshop at LREC2018 | Miyazaki, Japan | May 8th, 2018 Submission deadline: January 14th, 2018 (see also Important dates below) RaPID website: <https://spraakbanken.gu.se/eng/rapid-2018> The RaPID 2018 Workshop will follow up on the successful RaPID Workshop @ LREC2016 (<https://spraakbanken.gu.se/eng/rapid-2016>) *CALL FOR PAPERS:* RaPID-2018 will be an interdisciplinary forum for researchers to share information, findings, and experience on the creation and processing of data acquired or produced by people with various forms of mental, cognitive, neuropsychiatric, or neurodegenerative impairments, such as aphasia, dementia, autism, Parkinsons or schizophrenia. Particularly, the workshop focus on the creation, annotation, description, processing and analysis of linguistic, paralinguistic and extra-linguistic resources (e.g., spontaneous spoken language; audio-recorded samples and transcripts; eye tracking measurements; wearable and in-situ sensor data etc.) from individuals at various stages of these impairments and with varying degrees of severity in order to identify, extract, process, correlate, evaluate and disseminate various linguistic phenotypes and measurements and thus aid the diagnosis, monitor the progression or predict individuals at risk. A central aim is to facilitate the study of the relationships among various levels of linguistic, paralinguistic and extra-linguistic observations (e.g., acoustic measures; phonological, syntactic and semantic features; eye tracking measurements; sensors, signs and multimodal signals). Submission of papers are invited in all of the aforementioned areas, particularly emphasizing multidisciplinary aspects of processing such data and the interplay between clinical/nursing/medical sciences, language technology, computational linguistics, natural language processing (NLP) and computer science. The workshop will act as a stimulus for the discussion of several ongoing research questions driving current and future research by bringing together researchers from various research communities. *TOPICS OF INTEREST:* The topics of interest for the workshop session include but are not limited to: - Building, adapting and availability of linguistic resources, data sets and tools - Data collection methodologies - Acquisition and combination of novel data samples - Guidelines, annotation schemas, annotation tools - Addressing the challenges of representation, including dealing with data sparsity and dimensionality issues, feature combination from different sources and modalities - Domain adaptation of NLP tools - Acoustic/phonologic/phonetic, syntactic, semantic and pragmatic/discourse analysis of data; including modeling of perception (e.g. eye-movement measures of reading) and production processes (e.g. recording of the writing process by means of digital pens, keystroke logging etc.); use of gestures accompanying speech and non-linguistic behavior - Modeling and deep / machine learning approaches for early diagnostics, prediction, monitoring, classification etc. of various cognitive and psychiatric impairments - Information fusion - Evaluation of the significance of features in diagnostics - Evaluation of tools, systems, components, metrics, applications and technologies including methodologies making use of NLP - Evaluation, comparison and critical assessment of resources - Digital platforms/technologies for cognitive assessment and brain training - Involvement of medical/clinical professionals and patients - Ethical and legal questions in research with human data in the domain, and how they can be handled - Deployment - Experiences, lessons learned and the future of NLP/AI in the area *SUBMISSION DETAILS:* Papers are invited in all of the areas outlined in the Topics of interest, particularly emphasizing multidisciplinary aspects of processing such data and the interplay between clinical/nursing/medical sciences, language technology, computational linguistics, NLP, and computer science. We welcome also papers discussing problems derived from the design of relevant data samples and populations, but also the exploitation of results and outcomes as well as legal and ethical questions on how to deal with such data and make it available. The workshop solicits papers describing original research. Papers may preferably describe substantial and completed work, but may also focus on a contribution, a negative result, an interesting application nugget, a software package, a small, focused contribution *or* work in progress. The workshop will act as a stimulus for the discussion of several ongoing research questions driving current and future research and challenges by bringing together researchers from various research communities. RaPID-2018 will be a half-day LREC workshop to be held in the afternoon of Tuesday the 8th of May 2018. The oral presentations will be allocated 10-20 minutes (please see the program for details), possibly, followed by a common poster session (depending on the volume of received submissions). Submitted papers must be formatted according to the camera-ready style for LREC 2018 (style guidelines, templates etc. for the camera-ready papers are provided on LREC's main conference page/Submission), and submitted electronically in PDF format through the START conference manager page < https://www.softconf.com/lrec2018/RAPID-2/>. Authorship does not have to be anonymous and *papers should be 4-8 pages of content*. Additional, unlimited pages containing the list of references and appendices are allowed. We will strive to have all submissions reviewed by at least three, or more, members of the program committee. Depending on the volume of contributions, papers that describe systems or tools will be invited to give a demo of their system during a poster session. *IMPORTANT DATES:* - Second call for papers: 13th of December, 2017 - Submission deadline: Sunday 14th of January, 2018 - Notification of acceptance: Saturday 10th of February, 2018 - Early-bird registration for the main conference *and* workshops is the 15th of February, 2018 - Camera-ready papers: Sunday 10th of March 2018 - RaPID Workshop: Tuesday 8th of May, 2018 *CONTACT:* Dimitrios Kokkinakis: dimitrios _DOT_ kokkinakis _AT_ gu _DOT_ se *INVITED SPEAKER:* Yasunori Yamada, PhD. Aging Research, IBM Research - Tokyo. *ORGANIZING COMMITTEE:* - Dimitrios Kokkinakis, University of Gothenburg, Sweden - Kristina Lundholm Fors, University of Gothenburg, Sweden - Kathleen Fraser, University of Gothenburg, Sweden - Charalambos Themistocleous, University of Gothenburg, Sweden - Graeme Hirst, University of Toronto, Canada - Alexandra König, Geriatric Hospital Nice and the University of Côte d'Azur, France - Frank Rudzicz, Toronto Rehabilitation Institute and the University of Toronto, Canada *PROGRAMME COMMITTEE**:* - Osvaldo Agamennoni, Universidad Nacional del Sur, Argentina - Jan Alexandersson, DFKI GmbH, Germany - Eiji Aramaki, Kyoto University, Japan - Heidi Christensen, University pf Sheffield, UK - Simon Dobnik, University of Gothenburg, Sweden - Marie Eckerström, University of Gothenburg, Sweden - Jens Edlund, KTH - Royal Institute of Technology, Sweden - Gerasimos Fergadiotis, Portland State University, USA - Kathleen Fraser, University of Gothenburg, Sweden - Peter Garrard, St George's, University of London, UK - Lena Hartelius, the Sahlgrenska Academy, University of Gothenburg, Sweden - Graeme Hirst, University of Toronto, Canada - Kristy Hollingshead, Florida Institute for Human & Machine Cognition (IHMC), USA - Richard Johansson, University of Gothenburg, Sweden - Masatomo Kobayashi, IBM Research, Tokyo, Japan - Dimitrios Kokkinakis, University of Gothenburg, Sweden - Alexandra König, Geriatric Hospital Nice and the University of Côte d'Azur, France - Peter Ljunglöf, Chalmers University of Technology, Sweden - Kristina Lundholm Fors, University of Gothenburg, Sweden - Marcus Nyström, University of Lund, Sweden - Paul Rayson, Lancaster University, UK - Vassiliki Rentoumi, SKEL, NCSR Demokritos, Greece - Fabien Ringeval, Université Grenoble Alpes, France - Frank Rudzicz, Toronto Rehabilitation Institute and the University of Toronto, Canada - Kairit Sirts, University of Tartu, Estonia - Hironobu Takagi, IBM Research, Tokyo, Japan - Charalambos Themistocleous, University of Gothenburg, Sweden - Athanasios Tsanas, University of Oxford, UK - Magda Tsolaki, Aristotle University of Thessaloniki, Greece - Spyridoula Varlokosta, National and Kapodistrian University of Athens, Greece - Åsa Wengelin, University of Gothenburg, Sweden - Yasunori Yamada, IBM Research, Tokyo, Japan ------------------------------ ------------------------------

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BRAIN Initiative Fellows: Ruth L. Kirschstein National Research Service Award (NRSA) Individual Postdoctoral Fellowship (F32)
by Michele Ferrante Dec. 12, 2017

Dec. 12, 2017

The NIH has reissued a postdoctoral funding opportunity through the BRAIN Initiative to encourage applications from those with quantitative backgrounds including physics, math, chemistry, etc. Please share this information widely. *BRAIN Initiative Fellows: Ruth L. Kirschstein National Research Service Award (NRSA) Individual Postdoctoral Fellowship (F32)* - Purpose is to enhance research training of promising postdoctorates, early in their postdoctoral training period, who have the potential to become productive investigators in research areas that will advance the goals of the BRAIN Initiative. - Applications must be relevant to one or more goals of the BRAIN 2025 <https://braininitiative.nih.gov/pdf/BRAIN2025_508C.pdf> report, including neuroethics. - Formal training in analytical tools appropriate for the proposed research is expected to be an integral component. - Eligible trainees must be must be citizens or non-citizen nationals of the United States or have been lawfully admitted for permanent residence. - On the application due date, candidates may not have completed more than 12 months of postdoctoral training, excluding well-justified leave. - Due dates: *March 15, 2018; December 7, 2018; August 7, 2019; April 7, 2020.* - *Pre-submission Webinar December 12, 2017 at 1 PM EST https://nih.webex.com/nih/onstage/g.php?MTID=e48f6b7a4f3ca4f2172c591e4838af… <https://nih.webex.com/nih/onstage/g.php?MTID=e48f6b7a4f3ca4f2172c591e4838af…>* - Contact: Ashlee Van’t Veer Brain.Initiative.Training(a)nih.gov - RFA link: https://grants.nih.gov/grants/guide/rfa-files/RFA-MH-18-510.html

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NIH/NSF funded postdoc (U Penn/U Houston/CU Boulder)
by Zachary Kilpatrick Dec. 12, 2017

Dec. 12, 2017

We are seeking a postdoctoral fellow to join an NIH/NSF funded interdisciplinary project that includes Joshua Gold (University of Pennsylvania), Krešo Josić (University of Houston), and Zack Kilpatrick (University of Colorado, Boulder). Our aim is to understand how the brain accumulates evidence in dynamic environments. The project is guided by the overriding hypothesis that brain networks involved in decision-making computations incorporate learned expectations of the environment to implement adaptive decision-making. We seek a candidate who can work at the interface of experimental, computational, and theoretical neuroscience. As part of an interdisciplinary team, The candidate will develop models of neural circuits that approximate normative evidence accumulation in dynamic environments. The candidate will also help to validate these models, using behavioral data from humans and neural recordings from primates performing dynamic decision tasks. For further information please contact Krešimir Josić (josic(a)math.uh.edu <mailto:josic@math.uh.edu>) or Zack Kilpatrick (zpkilpat(a)colorado.edu <mailto:zpkilpat@colorado.edu>)

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Call for Workshops - Bernstein Conference 2018
by Kerstin Schwarzwaelder Dec. 12, 2017

Dec. 12, 2017

The Bernstein Network Computational Neuroscience invites proposals for Satellite Workshops directly preceding the Bernstein Conference 2018 in Berlin. ************************************************************** Important Dates: Satellite Workshops: September 25 - 26, 2018 Main Bernstein Conference: September 26 - 28, 2018 Deadline for Satellite Workshop proposal submission: March 15, 2018 Notification of Workshop acceptance: April 2018 ************************************************************** Since 2013, the Bernstein Conference hosts pre-conference workshops which provide a stage to discuss topical research questions, novel scientific approaches and challenges in Computational Neuroscience and related fields. Workshops addressing controversial issues, open problems, and comparisons of competing approaches are encouraged. The format should be designed to foster debate, rather than a mere series of talks. The Bernstein Conference started out as the annual meeting of the Bernstein Network Computational Neuroscience and has become the largest annual single-track Computational Neuroscience conference in Europe in recent years. Satellite Workshop schedule: September 25, 2018, 2:00 pm - 6:30 pm September 26, 2018, 8:30 am - noon Workshop proposals are welcome for either half-day or full-day workshops. Workshop costs – FINANCIAL SUPPORT: All organizers and speakers of accepted workshops will receive a waiver for the workshop fee. Organizers of accepted workshops additionally receive a waiver for the main conference. Up to 10 selected workshops can receive financial support up to 1.500,00 € each. For further information about the conference, please visit the conference website http://www.bernstein-conference.de. INSTRUCTIONS FOR WORKSHOP PROPOSAL PREPARATION Workshop proposals must contain: 1) Workshop Title 2) Concise description of workshop topic 3) List of potential speakers indicating speaker commitment Please use the Workshop Proposal Form that can be downloaded here: http://www.nncn.de/de/bernstein-conference/2018/satellite-workshops Deadline for submission of Workshop proposals: March 15, 2018 CONTACT: bernstein.network(at)fz-juelich.de We are looking forward to seeing you in Berlin! WORKSHOP SELECTION COMMITTEE: Jakob Macke (Workshop Chair) Tatjana Tchumatchenko (Workshop Vice Chair) Axel Borst Nicolas Brunel Anne Churchland Claudia Clopath Gaute Einevoll Adrienne Fairhall Gilles Laurent (Program Chair) Mate Lengyel Elad Schneidman Susanne Schreiber (Program Vice Chair) Terry Sejnowski Henning Sprekeler (Conference Host) Fred Wolf -- Dr. Kerstin Schwarzwälder Scientific Coordination / Management Officer Please note: Our email addresses have changed. Please use k.schwarzwaelder(a)fz-juelich.de<mailto:k.schwarzwaelder@fz-juelich.de> Bernstein Network Computational Neuroscience | Bernstein Coordination Site (BCOS) Branch Office of the Forschungszentrum Jülich at the University of Freiburg Hansastr. 9A | 79104 Freiburg, Germany phone: (+49) 0761 203 9589 mail: k.schwarzwaelder(a)fz-juelich.de<mailto:k.schwarzwaelder@fz-juelich.de> web: www.nncn.de<http://www.nncn.de> Twitter: NNCN_Germany<https://twitter.com/NNCN_Germany> YouTube: Bernstein TV<https://www.youtube.com/user/BernsteinNetwork> Facebook: Bernstein Network Computational Neuroscience, Germany<https://www.facebook.com/BernsteinNetwork/> LinkedIn: Bernstein Network Computational Neuroscience, Germany<https://www.linkedin.com/company/bernstein-network-computational-neuroscien…> <https://www.linkedin.com/company/bernstein-network-computational-neuroscien…> ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Juelich GmbH 52425 Juelich Sitz der Gesellschaft: Juelich Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Dr. Karl Eugen Huthmacher Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender), Karsten Beneke (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt, Prof. Dr. Sebastian M. Schmidt ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------

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[meetings] 2nd CFP IEEE WCCI/IJCNN Special Session: Cognition and Development
by Nikolas HEMION Dec. 11, 2017

Dec. 11, 2017

=============== CALL FOR PAPERS =============== IEEE WCCI / IJCNN 2018 Special Session: Cognition and Development 8-13 July 2018, Rio de Janeiro, Brazil Important dates: 15th January 2018 – Paper Submission 15th March 2018 – Paper Acceptance 1st May 2018 – Final Paper Submission 8-13 July 2018 – IEEE WCCI / IJCNN 2018, Rio de Janeiro, Brazil Scope and Topics The special session aims at the presentation of the latest results in the investigation of machine learning and cognitive robotics models that are taking inspiration from our understanding of sensorimotor, cognitive, and social development in humans and other animals. The aim is twofold: On the one hand, the special session provides a platform for presenting insights about the functions and processes underlying developmental learning. On the other hand, it encourages discussion of the role of developmental aspects in learning, in particular in the light of the ongoing success of deep learning methods. Relevant research questions include: – How can deep learning models be improved by including developmental processes, such as intrinsic motivation, sensorimotor exploration, or social learning and interaction? – Is current deep learning methodology suited for autonomous and open-ended learning in cognitive robots? Or will it be necessary to consider developmental processes, and if so, which ones? – What are the mechanisms that allow a child or robot to autonomously develop cognitive capabilities? – How does the social and physical environment, with which the child interacts, shape and scaffold the child’s developing cognitive skills and knowledge? And how can machine learning systems (including cognitive robots) exploit these beneficial factors? – What is the relative contribution of Nature and Nurture in the development of human and machine intelligence? – What do qualitative stages during development, and body and brain maturational changes, tell us about the mechanisms and principles supporting development? The special session also encourages submissions of relevant research on cognition and development from other disciplines, such as child psychology, developmental linguistics, neuroscience, philosophy, and interdisciplinary approaches to cognition and development. List of main topics: – developmental robotics – epigenetic robotics – developmental deep learning – neuro-robotics – bio-inspired and cognitive robotics – cognitive modelling – intrinsic motivation – sensorimotor development – cognitive development – social development – language acquisition Submission Guidelines: Please follow the general submission guidelines of the IEEE WCCI / IJCNN 2018 (see http://www.ecomp.poli.br/~wcci2018/) Please make sure to select the Special Session "Cognition and Development" as the "Main Research Topic" of your submission. Organizers: Nikolas J. Hemion, SoftBank Robotics Europe, Paris, France Anna-Lisa Vollmer, Bielefeld University, Germany Angelo Cangelosi, Plymouth University, UK Pierre-Yves Oudeyer, Inria Bordeaux, France -- Nikolas Hemion, Ph.D. Senior Researcher, AI Lab Manager SoftBank Robotics Europe 43 rue du Colonel Pierre Avia 75015 PARIS http://nikolas.hemion.org/ -- *This email and any attachment thereto are confidential and intended solely for the use of the individual or entity to whom they are addressed.If you are not the intended recipient, please be advised that disclosing, copying, distributing or taking any action in reliance on the contents of this email is strictly prohibited. In such case, please immediately advise the sender, and delete all copies and attachment from your system.This email shall not be construed and is not tantamount to an offer, an acceptance of offer, or an agreement by SoftBank Robotics Europe on any discussion or contractual document whatsoever. No employee or agent is authorized to represent or bind SoftBank Robotics Europe to third parties by email, or act on behalf of SoftBank Robotics Europe by email, without express written confirmation by SoftBank Robotics Europe’ duly authorized representatives.* ------------------------------ *Ce message électronique et éventuelles pièces jointes sont confidentiels, et exclusivement destinés à la personne ou l'entité à qui ils sont adressés.Si vous n'êtes pas le destinataire visé, vous êtes prié de ne pas divulguer, copier, distribuer ou prendre toute décision sur la foi de ce message électronique. Merci d'en aviser immédiatement l'expéditeur et de supprimer toutes les copies et éventuelles pièces jointes de votre système.Ce message électronique n'équivaut pas à une offre, à une acceptation d’offre, ou à un accord de SoftBank Robotics Europe sur toute discussion ou document contractuel quel qu’il soit, et ne peut être interprété comme tel. Aucun employé ou agent de SoftBank Robotics Europe n'est autorisé à représenter ou à engager la société par email, ou à agir au nom et pour le compte de la société par email, sans qu’une confirmation écrite soit donnée par le représentant légal de SoftBank Robotics Europe ou par toute autre personne ayant reçu délégation de pouvoir appropriée.*

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Postdoctoral position at Brandeis in theoretical neuroscience
by Jonathan Touboul Dec. 10, 2017

Dec. 10, 2017

A postdoctoral position is available at Brandeis University to work on exciting problems in theoretical neuroscience (mathematical-neuroscience.net <http://mathematical-neuroscience.net/> <http://mathematical-neuroscience.net/ <http://mathematical-neuroscience.net/>>). The techniques we employ rely on dynamical systems (with delays, multiple timescales, nonlocal terms or jumps) and stochastic processes (statistical physics), and our research topics include the analysis of the dynamics of neuron model or neural networks with heterogeneous elements, learning, memory and pathological brain states, as well as the embryonic development of neural assemblies. All projects will involve heavy collaboration with experimental groups in the Boston area, Paris and abroad. The positions are up to 3 year terms, contingent upon satisfactory progress, with competitive salary and benefits packages. The fellows will participate to the vibrant scholar life in the Boston area. The successful candidates will join the Mathematics Department at Brandeis University (http://www.brandeis.edu/departments/mathematics/ <http://www.brandeis.edu/departments/mathematics/> <http://www.brandeis.edu/departments/mathematics/ <http://www.brandeis.edu/departments/mathematics/>>) with strong ties to the Neuroscience group (http://www.bio.brandeis.edu/ <http://www.bio.brandeis.edu/> <http://www.bio.brandeis.edu/ <http://www.bio.brandeis.edu/>>). Opportunities to teach in the math department could be available and are encouraged! Candidates should have a Ph.D. in mathematics, (computational) neuroscience, physics or engineering and have an excellent track record of scholarship, have experience in dynamical systems and/or stochastic models, and be familiar with computational programing. Applications from under-represented groups are strongly encouraged. Candidates should send their applications through MathJobs with a CV, a cover letter indicating their research interests and professional goals: https://www.mathjobs.org/jobs/jobs/11351 <https://www.mathjobs.org/jobs/jobs/11351> <https://www.mathjobs.org/jobs/jobs/11351 <https://www.mathjobs.org/jobs/jobs/11351>> Best wishes, Jon http://mathematical-neuroscience.net <http://mathematical-neuroscience.net/>

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4-year postdoc position in neural systems modelling at the University of Oslo
by Gaute Einevoll Dec. 9, 2017

Dec. 9, 2017

Postdoctoral Research Fellowship in Neural Systems Modelling Position as postdoctoral research fellow available at the Department of Bioscience at the University of Oslo. The fellowship period is 4 years, with 25 % compulsory work. Anticipated start date is 01.02.2018. Project description: We study neural processing and plasticity of neural circuits at multiple levels, from the morphological changes at the synapse to functional changes of network activity in behaving animals. The position will be part of the project 'BrainMatrix' funded by the Norwegian Research Council, and seeks to explore the biophysical and physiological roles of perineuronal nets (PNNs) in neuron information processing and plasticity. PNNs are extracellular protein complexes thought to act as long-lasting synaptic anchors, thereby defining stable structural and functional connectivity in widespread but discrete regions of the brain. The entire BrainMatrix project is built on interdisciplinary principles and will involve strong interaction between mathematical modelling and experimental goals across the levels of investigation. As such, a key feature of this position will be to work between the outstanding computational and experimental groups at Simula Research Laboratory (www.simula.no)<http://www.simula.no%29/> andthe University of Oslo (www.mn.uio.no/ibv/english/research/sections/fyscell/cinpla)<http://www.mn.uio.no/ibv/english/research/sections/fyscell/cinpla)>. For this reason, the candidate should have experience in either computational neurophysiology/cell electrophysiology or experimental, and a strong desire and potential to expand their skillset to include the other discipline. Job description: We are searching to fill a 4-year full time postdoctoral, with 75% of the time devoted to research and 25% reserved for other career promoting activities such as lecturing or mentoring. The successful candidate will develop and implement models for interrogating the effects of genetic and pharmacologic manipulation of PNNs on single neuron and network function in visual and spatial information processing. The modeling approach will take advantage of tools and resources available through the Human Brain Project, and developed locally such as the NEST and LFPy simulators. The experimental goals will involve opportunities to apply or learn classical slice electrophysiology and single/multi-unit extracellular recordings, as well as advanced in vivo optical recordings and in vivo patch clamping. Within the framework of the position duties corresponding to one year of compulsory work may be assigned. For more information, including on how to apply, see: https://www.jobbnorge.no/ledige-stillinger/stilling/145487/postdoctoral-res… Deadline for application: January 10th 2018 For questions, please contact: Associate Professor Andy Edwards, phone: +47 40472451, e-mail:andrew.edwards@ibv.uio.no ********************************************** Gaute T. Einevoll Faculty of Science and Technology Norwegian University of Life Sciences, 1432 Aas, Norway; Department of Physics, University of Oslo, Oslo, Norway Ph. +47-64965433, Mobile: +47-95124536 email: Gaute.Einevoll(a)nmbu.no<mailto:Gaute.Einevoll@nmbu.no>, web: compneuro.nmbu.no, cinpla.org

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PhD positions at the University of Bristol
by Tsaneva-Atanasova, Krasimira Dec. 8, 2017

Dec. 8, 2017

Wellcome Trust 4 year PhD Programme in Neural Dynamics University of Bristol Deadline for applications: Sunday 7 January 2018 Why investigate neural dynamics? A vital key to comprehending the brain is to understand how the complex changes in activity occurring at all levels of neural organization give rise to normal brain function. Furthermore, an understanding of normal brain activity will allow us to investigate abnormalities of neural dynamics that underlie many neurological and psychiatric disorders (e.g. epilepsy, Parkinson’s disease, schizophrenia). Understanding neural dynamics<https://www.findaphd.com/common/clickCount.aspx?theid=602&type=185&url=http…> requires interdisciplinary approaches that span many neuroscience areas, but crucially, also depends on the integration of experimental and clinical approaches with mathematical and computational expertise. This PhD programme trains a future generation of neuroscientists to successfully combine experimental and theoretical techniques in their research. Structure of the programme First year: students attend taught courses to gain an understanding of the biology of the nervous system and the ability to describe systems dynamics in mathematical models. Students carry out two extended research projects, each investigating dynamics in a different neural system. Each project is co-advised by one experimental or clinical neuroscientist and one mathematician or computer scientist. Subsequent years: Students develop one of the initial projects into a PhD project for the remaining 3 years. Who are we looking for? Applicants will have a 1st class/2.1 degree or a Masters in a biomedical science discipline or a relevant theoretical discipline (mathematics, computer science or physics). Crucially, we are looking for talented and motivated students willing to take up the many challenges in neural dynamics and who are open to learning about new disciplines and working across different fields. Why study at Bristol? Bristol has one of the largest concentrations of neuroscientists in Europe and is a major centre for basic and clinical neuroscience. The University of Bristol is an acknowledged world leader in many key areas of neural dynamics from both an experimental and theoretical perspective: Our research spans molecular, cellular and systems levels of neuroscience. Together with experts in systems dynamics, based in the Departments of Engineering Mathematics, Mathematics, Computer Science and the Bristol Robotics Lab we can provide considerable scope for ground breaking integrative research projects. How to apply: Application process: Please apply online at www.bris.ac.uk/study/postgraduate/apply<https://www.findaphd.com/common/clickCount.aspx?theid=602&type=185&url=http…> by selecting ‘Faculty of Biomedical Sciences’ and ‘Wellcome 4-year PhD in Neural Dynamics’ Please ensure you include a CV, and two referees plus a cover letter outlining your own neuroscience interests by Sunday 7 January 2018. Please upload your covering letter into the Personal Statement section of the application form. Shortlisted applicants will be invited to an interview in late January. The Wellcome Trust provides a stipend and PhD registration fees at UK/EU student rate, research expenses, contribution towards travel and a contribution towards transferable-skills training. The Wellcome Trust does not pay fees at the overseas rate. For further information please see www.bristol.ac.uk/neural-dynamics<https://www.findaphd.com/common/clickCount.aspx?theid=602&type=185&url=http…> or contact: Lindsey Watson, Graduate Administration Manager, Faculty of Biomedical Sciences, Graduate School (Lindsey.Watson(a)bris.ac.uk)

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Scientist opening at the Allen Institute: "Simulation & Analysis of Human Circuit Dynamics"
by Costas Anastassiou Dec. 7, 2017

Dec. 7, 2017

Dear All: We are seeking a Scientist to be an essential team member in our ongoing effort to understand how the human brain processes information. The core responsibility for this position is to setup large-scale computational simulations and data analysis workflows from slice and in vivo brain physiology in humans. Find the full job description attached below. To apply for this position, apply through the link below: https://apply.hrmdirect.com/resumedirect/ApplyOnline/Apply.aspx?req_id=6535… Best, Costas -- Costas Anastassiou Assistant Investigator T: 206.548.8434 E: costasa(a)alleninstitute.org alleninstitute.org Professor (adj.) of Neurology University of British Columbia, Vancouver BC, CA http://neuroscience.ubc.ca/people/Anastassiou Our mission at the Allen Institute for Brain Science is to accelerate the understanding of how the human brain works in health and disease. By implementing a team science approach on a large scale, we strive to generate useful public resources, drive technological innovations and discover fundamental brain properties through integration of experiments, modeling and theory. POSITION SUMMARY We are seeking a Scientist to be an essential team member in our ongoing effort to understand how the human brain processes information. The core responsibility for this position is to setup large-scale computational simulations and data analysis workflows from slice and in vivo brain physiology in humans. More specifically, the Scientist will (i) design and conduct simulations with an existing large-scale computational framework allowing simulation of a multitude of reconstructed, interconnected and biophysically realistic human neurons (e.g. [Schomburg, Anastassiou et al, J Neurosci, 2012; Reimann, Anastassiou et al, Neuron, 2013]; (ii) analyze simulated and experimental data to establish structure-function relationships (e.g. [Taxidis, Anastassiou et al, Neuron, 2015]); (iii) develop dimensionally reduced representations of neural function (e.g. using machine learning or statistical data modeling) based on recorded signals (encoding) and develop methods for reconstructing! neural function from neural activity (decoding); (iv) compare computational findings with experimental observables. ESSENTIAL DUTIES AND RESPONSIBILITIES In close collaboration with theoreticians and experimental colleagues, design, implement and conduct single-neuron and large-scale network simulations of human middle temporal gyrus. Contribute to ongoing efforts in computational framework development (simulation and data analysis) as well as to scientific questions relevant to the system under investigation. Contribute to adjacent projects related to human pathophysiology and neurotherapies. Publish/present findings in peer-reviewed journals/scientific conferences. Prepare written and oral reports on a regular basis. Maintain clear and accurate communication with supervisor, team members and external collaborators. BASIC QUALIFICATIONS PhD degree in computational neuroscience, physics, applied mathematics, bioengineering or related field. Strong background in scientific computing; experience in computational neuroscience is preferred, but other strong applicants will be considered (with background in computational physics, applied mathematics, biophysics, and related disciplines). Experience with parallel computing is a plus as well as familiarity with high-level programming languages such as Python. Familiarity with in vitro and in vivo electrophysiological monitoring techniques and analysis. DESIRED QUALIFICATIONS: Ability to meet aggressive timelines and deliverables in a collaborative environment. Strong publication record. Experience in pursuing research projects in collaborative fashion. Proven independent thinking and flexibility. Strong written and verbal communication skills.

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[SUSPECTED SPAM] PhD at Florida Atlantic Universitys Center for Complex Systems and Brain Sciences
by Emmanuelle Tognoli Dec. 7, 2017

Dec. 7, 2017

Applications are currently being accepted for fully funded multidisciplinary PhD training in Complex Systems & Brain Sciences (http://www.ccs.fau.edu/phd_overview.php) at Florida Atlantic University. Students will be trained to perform cutting-edge brain research that combines neuro-behavioral and cognitive experiments, laboratory neurobiology, medical imaging, and computational/theoretical modeling. Research projects will focus on approaches to understanding the brain as a complex dynamical system, with possible concentrations in areas such as cognitive, developmental, social, and systems neuroscience, neurorobotics, molecular and cellular neurobiology, and neuronal regeneration. Individuals with undergraduate degrees in any pertinent discipline are invited to apply. Two routes are available to enter the PhD program: the Graduate Neuroscience Training Program (http://www.ibrain.fau.edu/gradneuro/) or directly into the core program from the Center for Complex Systems & Brain Sciences (http://www.ccs.fau.edu/requirements.php) Applicants should review both tracks to determine which one best suits their interests. Students may also submit applications to both tracks. Application deadline for the Graduate Neuroscience Training Program: December 11, 2017 Application deadline for the core PhD program in Complex Systems & Brain Sciences: January 15, 2018 -- This message has been scanned for viruses and dangerous content by MailScanner, and is believed to be clean. -- This message has been scanned for viruses and dangerous content by MailScanner, and is believed to be clean.

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Fully-funded four-year PhD studentship in Computational Neuroscience at Imperial College London
by Reichenbach, Johann D T Dec. 6, 2017

Dec. 6, 2017

An exciting PhD project in Computational Multisensory Neuroscience is available for UK/EU candidates in the group of Tobias Reichenbach (http://www.bg.ic.ac.uk/research/reichenbach/index.html) at Imperial College London. The student will develop state-of-the art neuronal network models to investigate the effects of custom-build tactile stimuli on speech processing. The model development and results will be linked with neuroimaging and behavioural experiments, and will pave the way to aid speech comprehension in people with hearing impairments. The PhD position is part of the Center for Neurotechnology (http://www.imperial.ac.uk/neurotechnology/cdt) at Imperial College London. The successful candidate will join an international cohort of PhD students working on cutting-edge topics of computational and experimental neuroscience and engineering. To apply please visit the Centre's project page (http://www.imperial.ac.uk/neurotechnology/cdt/projects/) access the tab "Projects available for Oct 2018" and select the project "Engineering tactile signals to aid hearing in noisy backgrounds.” ------------------------------------------- Tobias Reichenbach Senior Lecturer (Associate Professor) Department of Bioengineering Imperial College London South Kensington Campus SW7 2AZ London, UK http://www.bg.ic.ac.uk/research/reichenbach/

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PhD or postdoctoral position at the Max Planck Institute for Biological Cybernetics in Tübingen, Germany
by Filip Sobczak Dec. 5, 2017

Dec. 5, 2017

Dear Colleagues, The Department of High-field Magnetic Resonance at the Max Plank Institute for Biological Cybernetics in Tübingen is offering one PhD or postdoctoral position under the supervision of Dr. Xin Yu (Group Leader at MPI for Biological Cybernetics). This position is open now until filled, starting in Jan, 2018. Research Description: Understand and learn to control the brain circuits underlying critical brain states, such as coma or arousal. Potential assignment: a) Build up a real-time bio-feedback controlling system for brain functional studies: i) Neural network system-based signal processing, ii) MR-guided robotic system development, iii) Machine learning-based multi-modal brain signal dynamic prediction. b) Implement the MRI/EEG/calcium recording methods for global brain state monitoring. c) Target specific nuclei with deep brain optogenetic stimulation methods to study circuit-specific brain state neuromodulation: hippocampus, lateral hypothalamus, and VTA. Students with strong computational skills are highly encouraged to apply for this position. Experience with viral transfection, or in vivo. / in vitro. electrophysiology in animal models (rodents) with brain injury is highly desirable. The candidates should bear a certain experience or strong interest in brain functional imaging, e.g. task-based BOLD fMRI. The Max Plank Institute for Biological Cybernetics is located in Tübingen, Germany. The High-field Magnetic Resonance Department is equipped with the 3T, 9.4T human MR scanner and 14.1T animal Bruker MR Scanner. The Max Planck Society is an affirmative action/equal opportunity employer, and encourages applications from qualified women and minority candidates. Please send your CV (in English) to Dr. Yu (E-mail: xin.yu(a)tuebingen.mpg.de ). Dr. Yu has published seminal papers on high field MRI functional brain mapping in Nature Neuroscience, Nature Methods, Neuron, PNAS, NeuroImage etc.

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Postdoctoral Associate Positions in Computational Psychiatry, Virginia Tech Carilion Research Institute
by Pearl Chiu Dec. 4, 2017

Dec. 4, 2017

Postdoctoral Associate Positions in Computational Psychiatry Virginia Tech Carilion Research Institute Multiple postdoctoral associate positions are available immediately in the labs of Dr. Pearl Chiu and Dr. Brooks King-Casas at the Virginia Tech Carilion Research Institute (http://research.vtc.vt.edu/) Projects in the labs use fMRI to examine the neuroscience of motivated behavior and social influences on decision-making with methods from behavioral & computational neuroscience, experimental economics, computational psychiatry, and psychology; ongoing projects examine processes in healthy and psychiatric individuals. Qualified candidates with basic science, theoretical, and/or computational backgrounds are welcome, and training in applied science will be provided; a subset of projects also involve multi-dimensional biomarker development. For interested candidates, the labs provide plentiful opportunities to examine how neurobehavioral anomalies may be quantified and rehabilitated in depression, substance dependence, post-traumatic stress, personality disorders, and at-risk adolescents. The labs are located in the Virginia Tech Carilion Research Institute in Roanoke, VA, just off the Blue Ridge Parkway. The VTCRI provides full access to outstanding infrastructure, including three research-dedicated Siemens 3T scanners and a high-throughput computing cluster. The successful candidate will play a lead role in highly collaborative multidisciplinary scientific efforts. Minimum requirements for the position include: 1) a PhD in computational or cognitive neuroscience, engineering, psychology, experimental economics, or a related field; 2) facility with computational neuroscience, signal processing, Bayesian inference, or machine learning; and 3) demonstrated potential for excellence. Please forward a statement of interest and CV. Three letters of recommendation will be requested from candidates under final consideration. Consideration of applications will begin immediately and will end when the positions are filled. Salary is competitive and will be commensurate with experience and qualifications. Virginia Tech Carilion is an Affirmative Action/Equal Opportunity employer and is committed to cultural diversity and compliance with the Americans with Disabilities Act. Send inquiries and materials to: Pearl Chiu, PhD and Brooks King-Casas, PhD chiup(a)vtc.vt.edu<mailto:chiup@vtc.vt.edu> and bkcasas(a)vtc.vt.edu<mailto:bkcasas@vtc.vt.edu>

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1 PhD/PostDoc position in neuromorphic systems
by elisabetta chicca Dec. 4, 2017

Dec. 4, 2017

Dear colleagues, 1 PhD/PostDoc position is available at the Neuromorphic Behaving Systems group (https://www.cit-ec.de/en/nbs) Faculty of Technology and Center of Excellence Cognitive Interaction Technology at Bielefeld University. You can find details here: http://uni-bielefeld.de/Universitaet/Aktuelles/Stellenausschreibungen/Anzei… Best regards, Elisabetta Chicca -- Prof. Dr. Elisabetta Chicca CITEC - Bielefeld University Inspiration 1 33619 Bielefeld - Germany Tel.: +49 521 106-12043 Fax : +49 521 106-12348

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Master 2 internship
by Bruno Cessac Dec. 4, 2017

Dec. 4, 2017

Decoding cortical activity evoked by artificial retinal implants The NeOpTo team (Institut des Neurosciences de la Timone, Marseille, France) and the Biovision Team (Inria, Sophia Antipolis, France) propose a joint Master 2 internship, entitled "Decoding cortical activity evoked by artificial retinal implants" from March 2018 to August 2018. The details of the internship can be found here https://team.inria.fr/biovision/files/2017/11/StageINT.pdf To apply, please send us a CV, a letter of application outlining your academic interests, prior research experience and reasons for wishing to undertake the project, a transcript(s) giving full details of subjects studied and grades/marks obtained. Dr Bruno Cessac, Research Director at INRIA, Head of the BioVision team -INRIA 2004 Route des Lucioles-BP93 FR-06902 Sophia Antipolis Cedex

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PhD position at the University of Exeter
by Tsaneva-Atanasova, Krasimira Dec. 2, 2017

Dec. 2, 2017

Mathematical Modelling of Event-Related Potentials in Semantic Representation and Memory - Mathematics - EPSRC DTP funded PhD Studentship Ref: 2891 About the award This project is one of a number funded by the Engineering and Physical Sciences Research Council (EPSRC<https://www.epsrc.ac.uk/skills/students/>) Doctoral Training Partnership to commence in September 2018. This project is in direct competition with others for funding; the projects which receive the best applicants will be awarded the funding. The studentships will provide funding for a stipend which is currently £14,553 per annum for 2017-2018. It will provide research costs and UK/EU tuition fees at Research Council UK rates for 42 months (3.5 years) for full-time students, pro rata for part-time students. Please note that of the total number of projects within the competition, up to 15 studentships will be filled. Supervisors Professor Krasimira Tsaneva-Atanasova<http://emps.exeter.ac.uk/mathematics/staff/kt298> Location Streatham Campus, Exeter Project Description N400 is an event-related potential (ERP) component that tap into semantic representation and memory and is an important markers of cognitive function, hence valuable clinical tools for quantifying integrity of the semantic system in populations with semantic comprehension deficit including stroke survivors, patients with traumatic brain injuries (TBI) or focal seizure disorders. Yet the neural origin of this component is largely unknown, which limits robustness of its measurement and clinical applicability. This project investigates the origin of N400, i.e., whether it emerges as a result of phase alignment in the ongoing oscillatory activity or as a result of an evoked neural activity. In the first stage of the project, the student will explore the neural dynamics of N400 by applying model-based data analysis and feature extraction to already collected in the second supervisor’s lab in Bristol human scalp electroencephalogram (EEG) data from healthy younger and older people responding to meaningful stimuli such as words, sentences or pictures of objects. This analysis will inform data-driven generative model(s) parameterization. In the second stage, the network models developed in stage 1 will be perturbed to identify the parameters (features) for conditions such as stroke and traumatic brain injuries (TBI). The final stage of the project will aim to link the event-related response with the underlying induced and evoked activity and to further investigate this activity using learning in the model space approach. There is a potential to reveal therapeutic targets for stroke and TBI. Entry Requirements You should have or expect to achieve at least a 2:1 Honours degree, or equivalent, in applied mathematics, computer science, physics or engineering. Experience in biomedical engineering or experimental psychology is desirable. The majority of the studentships are available for applicants who are ordinarily resident in the UK and are classed as UK/EU for tuition fee purposes. If you have not resided in the UK for at least 3 years prior to the start of the studentship, you are not eligible for a maintenance allowance so you would need an alternative source of funding for living costs. To be eligible for fees-only funding you must be ordinarily resident in a member state of the EU. For information on EPSRC residency criteria click here<https://www.epsrc.ac.uk/skills/students/help/eligibility/>. Applicants who are classed as International for tuition fee purposes are NOT eligible for funding. International students interested in studying at the University of Exeter should search our funding database<http://www.exeter.ac.uk/postgraduate/money/fundingsearch/> for alternative options. Summary Application deadline: 10th January 2018 Value: 3.5 year studentship: UK/EU tuition fees and an annual maintenance allowance at current Research Council rate. Current rate of £14,553 per year. Duration of award: per year Contact: Doctoral College pgrenquiries(a)exeter.ac.uk<mailto:pgrenquiries@exeter.ac.uk> How to apply Apply now You will be required to upload the following documents: • CV • Letter of application outlining your academic interests, prior research experience and reasons for wishing to undertake the project. • Transcript(s) giving full details of subjects studied and grades/marks obtained. This should be an interim transcript if you are still studying. • If you are not a national of a majority English-speaking country you will need to submit evidence of your current proficiency in English. For further details of the University’s English language requirements please see http://www.exeter.ac.uk/postgraduate/apply/english/. The closing date for applications is midnight (GMT) on Wednesday 10 January 2018. Interviews will be held at the University of Exeter in late February 2018. If you have any general enquiries about the application process please email: pgrenquiries(a)exeter.ac.uk<mailto:pgrenquiries@exeter.ac.uk>. Project-specific queries should be directed to the supervisor. ________________________________ Krasimira Tsaneva-Atanasova Professor of Mathematics for Healthcare Department of Mathematics & Living Systems Institute, T02.17 University of Exeter, Stocker Road, Exeter, EX4 4QD, UK email: k.tsaneva-atanasova(a)exeter.ac.uk<mailto:k.tsaneva-atanasova@exeter.ac.uk> tel: +44 (0) 1392 723615 web: http://emps.exeter.ac.uk/mathematics/staff/kt298

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PhD position at the University of Exeter
by Tsaneva-Atanasova, Krasimira Dec. 2, 2017

Dec. 2, 2017

Developing Gaze Training for Skilled Upper-Limb Prosthetic Use - Mathematics - EPSRC DTP funded PhD Studentship Ref: 2892 About the award This project is one of a number funded by the Engineering and Physical Sciences Research Council (EPSRC<https://www.epsrc.ac.uk/skills/students/>) Doctoral Training Partnership to commence in September 2018. This project is in direct competition with others for funding; the projects which receive the best applicants will be awarded the funding. The studentships will provide funding for a stipend which is currently £14,553 per annum for 2017-2018. It will provide research costs and UK/EU tuition fees at Research Council UK rates for 42 months (3.5 years) for full-time students, pro rata for part-time students. Please note that of the total number of projects within the competition, up to 15 studentships will be filled. Supervisors Professor Krasimira Tsaneva-Atanasova<http://emps.exeter.ac.uk/mathematics/staff/kt298> Dr Gavin Buckingham<http://sshs.exeter.ac.uk/staff/index.php?web_id=Gavin_Buckingham> Dr Sam Vine<http://sshs.exeter.ac.uk/staff/index.php?web_id=Samuel_Vine> Professor Mark Wilson<http://sshs.exeter.ac.uk/staff/index.php?web_id=Mark_Wilson> Location Streatham Campus, Exeter Project Description Learning to use a prosthetic limb is inherently difficult and requires a huge amount of concentration. Like learning how to wield a new tool for the first time, amputees need to acquire the confidence and dexterity required for skilled action. In order to produce accurate goal-directed movements the motor system requires accurate and timely visual information making the timing and location of the person’s gaze, with relation to the movement of their limbs, critical for skilled behaviour. There is, however, no structured training protocol for use with prosthetic hands. We aim to develop a novel gaze training regime to facilitate the use of a prosthetic hand to skilfully interact with objects. In the first phase of the project, the student will undertake an observational study to determine what factors lead some individuals to become skilled with a prosthesis faster than others. We will test large numbers of intact (i.e., without amputation) participants learning to use a state-of-the-art myoelectric prosthetic arm simulator, which is controlled by muscle feedback but ergonomically designed to fit over the wrist of an intact hand. Participants will move objects of different of sizes and weights from one location to another with a range of precision requirements and in the presence of a range of obstacles. Over multiple sessions we will measure hand and object kinematics, fingertip forces, and eye path with a head-mounted eye tracker. We will then develop a data-driven mathematical model of the eye tracking and biomechanical performance data. Statistical analysis of the patterns of eye movement will provide new insights into the ‘signature’ of good performance using the prosthetic arm. The second phase will use the data from Project 1 to develop a training protocol that will adopt the ‘expert signatures’ from Phase 1 as a prototype for a trainee to follow. We will focus predominantly on the signature of expertise derived from the gaze behaviour measures and implement a gaze training protocol. We will then test the efficacy of this novel training regime with new set of intact participants using the prosthetic simulator, tracking their performance in comparison to individuals who will receive a sham training protocol. In the final phase of the project, the gaze training protocol will be used in a sample of upper-limb-amputees as they learn how to use their new prosthesis. As this stage of the project will not be limited to myoelectric prosthetic users, this will also allow us to test the generalizability of our training protocol. Entry Requirements You should have or expect to achieve at least a 2:1 Honours degree, or equivalent, in applied mathematics, computer science, physics or engineering. Experience in biomedical engineering or robotics is desirable. The majority of the studentships are available for applicants who are ordinarily resident in the UK and are classed as UK/EU for tuition fee purposes. If you have not resided in the UK for at least 3 years prior to the start of the studentship, you are not eligible for a maintenance allowance so you would need an alternative source of funding for living costs. To be eligible for fees-only funding you must be ordinarily resident in a member state of the EU. For information on EPSRC residency criteria click here<https://www.epsrc.ac.uk/skills/students/help/eligibility/>. Applicants who are classed as International for tuition fee purposes are NOT eligible for funding. International students interested in studying at the University of Exeter should search our funding database<http://www.exeter.ac.uk/postgraduate/money/fundingsearch/> for alternative options. Summary Application deadline: 10th January 2018 Value: 3.5 year studentship: UK/EU tuition fees and an annual maintenance allowance at current Research Council rate. Current rate of £14,553 per year. Duration of award: per year Contact: Doctoral College pgrenquiries(a)exeter.ac.uk<mailto:pgrenquiries@exeter.ac.uk> How to apply Apply now You will be required to upload the following documents: • CV • Letter of application outlining your academic interests, prior research experience and reasons for wishing to undertake the project. • Transcript(s) giving full details of subjects studied and grades/marks obtained. This should be an interim transcript if you are still studying. • If you are not a national of a majority English-speaking country you will need to submit evidence of your current proficiency in English. For further details of the University’s English language requirements please see http://www.exeter.ac.uk/postgraduate/apply/english/. The closing date for applications is midnight (GMT) on Wednesday 10 January 2018. Interviews will be held at the University of Exeter in late February 2018. If you have any general enquiries about the application process please email: pgrenquiries(a)exeter.ac.uk<mailto:pgrenquiries@exeter.ac.uk>. Project-specific queries should be directed to the supervisor. ________________________________ Krasimira Tsaneva-Atanasova Professor of Mathematics for Healthcare Department of Mathematics & Living Systems Institute, T02.17 University of Exeter, Stocker Road, Exeter, EX4 4QD, UK email: k.tsaneva-atanasova(a)exeter.ac.uk<mailto:k.tsaneva-atanasova@exeter.ac.uk> tel: +44 (0) 1392 723615 web: http://emps.exeter.ac.uk/mathematics/staff/kt298

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PhD position at the University of Exeter
by Tsaneva-Atanasova, Krasimira Dec. 2, 2017

Dec. 2, 2017

Understanding Emergent Complex Noisy Patterns in Biological Cells - Mathematics - EPSRC DTP funded PhD Studentship Ref: 2890 About the award This project is one of a number funded by the Engineering and Physical Sciences Research Council (EPSRC<https://www.epsrc.ac.uk/skills/students/>) Doctoral Training Partnership to commence in September 2018. This project is in direct competition with others for funding; the projects which receive the best applicants will be awarded the funding. The studentships will provide funding for a stipend which is currently £14,553 per annum for 2017-2018. It will provide research costs and UK/EU tuition fees at Research Council UK rates for 42 months (3.5 years) for full-time students, pro rata for part-time students. Please note that of the total number of projects within the competition, up to 15 studentships will be filled. Supervisors Associate Professor Jan Sieber<http://emps.exeter.ac.uk/mathematics/staff/js543> Prof Krasimira Tsaneva-Atanasova<https://emps.exeter.ac.uk/mathematics/staff/kt298> Dr Joel Tabak<http://medicine.exeter.ac.uk/people/profile/index.php?web_id=Joel_Tabak-Szn…> Location Streatham Campus, Exeter Project Description One of the most fascinating phenomena in nature is that small random disturbances can create systematic large-scale patterns of motion. Mathematically, this is described by the theory of nonlinear dynamics. One essential process governed by this theory is electrical signalling in animal and plant cells. Biological cells communicate with periodic or more complex patterns of electrical signals that underlie thinking, hormone release or muscle movement. These patterns are extremely sensitive to various types of noise present in cells such as rapid fluctuations and slow random drift. A general mathematical question is how precisely the different types of small noise perturbations influence the emergent patterns in nonlinear systems. Applications of the insights gained from mathematical analysis to understanding and controlling living cells would allow us to inform novel therapies for hormonal or neural disorders such as chronic stress response or essential tremor for example. Traditionally, mathematical modelling of cells has been applied to idealised, noise-free models. This funded PhD studentship will investigate how small noise drives and controls periodic and non-periodic patterns in general, and specifically in excitable cell models and experiments. The student will design a method to remove noise from emergent electrical patterns, using techniques from dynamical systems theory and feedback control theory. Joel Tabak (one of the project supervisors) has developed a proof of concept methodology for periodic patterns that is similar to what is used in noise-cancelling headphones, but uses concepts from dynamical systems to determine the perturbing noise. Being able to remove noise will allow us to compare the patterns in noisy and noise-free conditions. This will help scientists understanding how noise controls electrical patterns in many types of electrically active cells. The student will design further new methods for removing noise in mathematical models (ordinary differential equations) of electrically active cells. The PhD studentship will benefit from close collaboration with Joel Tabak’s neuroscience laboratory. This laboratory is able to perform experiments with live cells in real time using electrical signals in dynamic clamp experiments. Thus, the student will have the opportunity to immediately test how their methods perform in a real biological system, and use the experimental results as a guide to refine their methodology. By interacting with experimental researchers, the student will also gain important experience in working within a multidisciplinary scientific team. Depending on the student’s interests and progress during the PhD studentship, there will also be the opportunity to learn electrophysiology in order to record the electrical activity from live cells. This project would suit a student keen to 1) learn and apply new maths concepts (nonlinear dynamical systems, multi-scale analysis, stochastic processes); 2) interact with people from different scientific fields; and 3) present their results at national and international conferences. Entry Requirements You should have or expect to achieve at least a 2:1 Honours degree, or equivalent, in mathematics or a natural sciences or engineering programme with a strong quantitative component. Experience in nonlinear dynamics, mathematical biology or probability, and some programming experience are desirable. The majority of the studentships are available for applicants who are ordinarily resident in the UK and are classed as UK/EU for tuition fee purposes. If you have not resided in the UK for at least 3 years prior to the start of the studentship, you are not eligible for a maintenance allowance so you would need an alternative source of funding for living costs. To be eligible for fees-only funding you must be ordinarily resident in a member state of the EU. For information on EPSRC residency criteria click here<https://www.epsrc.ac.uk/skills/students/help/eligibility/>. Applicants who are classed as International for tuition fee purposes are NOT eligible for funding. International students interested in studying at the University of Exeter should search our funding database<http://www.exeter.ac.uk/postgraduate/money/fundingsearch/> for alternative options. Summary Application deadline: 10th January 2018 Value: 3.5 year studentship: UK/EU tuition fees and an annual maintenance allowance at current Research Council rate. Current rate of £14,553 per year. Duration of award: per year Contact: Doctoral College pgrenquiries(a)exeter.ac.uk<mailto:pgrenquiries@exeter.ac.uk> How to apply Apply now You will be required to upload the following documents: • CV • Letter of application outlining your academic interests, prior research experience and reasons for wishing to undertake the project. • Transcript(s) giving full details of subjects studied and grades/marks obtained. This should be an interim transcript if you are still studying. • If you are not a national of a majority English-speaking country you will need to submit evidence of your current proficiency in English. For further details of the University’s English language requirements please see http://www.exeter.ac.uk/postgraduate/apply/english/. The closing date for applications is midnight (GMT) on Wednesday 10 January 2018. Interviews will be held at the University of Exeter in late February 2018. If you have any general enquiries about the application process please email: pgrenquiries(a)exeter.ac.uk<mailto:pgrenquiries@exeter.ac.uk>. Project-specific queries should be directed to the supervisor. ________________________________ Krasimira Tsaneva-Atanasova Professor of Mathematics for Healthcare Department of Mathematics & Living Systems Institute, T02.17 University of Exeter, Stocker Road, Exeter, EX4 4QD, UK email: k.tsaneva-atanasova(a)exeter.ac.uk<mailto:k.tsaneva-atanasova@exeter.ac.uk> tel: +44 (0) 1392 723615 web: http://emps.exeter.ac.uk/mathematics/staff/kt298 ________________________________ Krasimira Tsaneva-Atanasova Professor of Mathematics for Healthcare Department of Mathematics & Living Systems Institute, T02.17 University of Exeter, Stocker Road, Exeter, EX4 4QD, UK email: k.tsaneva-atanasova(a)exeter.ac.uk<mailto:k.tsaneva-atanasova@exeter.ac.uk> tel: +44 (0) 1392 723615 web: http://emps.exeter.ac.uk/mathematics/staff/kt298

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NeuroMorpho.Org v7.3 released November 28th, 2017
by NeuroMorpho Administrator Dec. 2, 2017

Dec. 2, 2017

Dear colleagues, We’re pleased to announce the November 28, 2017 release of Version 7.3 of NeuroMorpho.Org<http://neuromorpho.org/>, adding 9987 reconstructions from 96 new datasets. The repository now provides access to 80,012 cells and passed 8 million downloads in 166 countries. Please visit the What’s new page<http://neuromorpho.org/WIN.jsp> for details on the added data and metadata. The literature coverage was also updated to include publications through October 2017, with more than 1000 articles referencing data in this resource. We are continuously grateful to all data contributors<http://neuromorpho.org/acknowl.jsp#DC> who freely share their hard-won tracings with the community. We appreciate any and all feedback and comments. Our apologies if you receive multiple versions of this message through cross-listing. Sincerely, The NeuroMorpho.Org team<http://neuromorpho.org/acknowl.jsp#NMO> ---------------- Giorgio Ascoli<http://krasnow1.gmu.edu/cn3/ascoli>, PhD University Professor Bioengineering Department<http://bioengineering.gmu.edu/>, Volgenau School of Engineering<http://volgenau.gmu.edu/> Neuroscience Program<http://neuroscience.gmu.edu/>, Krasnow Institute for Advanced Study<http://krasnow1.gmu.edu/> Director, Center for Neural Informatics, Structures, & Plasticity<http://krasnow1.gmu.edu/cn3> MS2A1 - George Mason University<http://gmu.edu/>, Fairfax, VA 22030-4444 Ph. +1(703)993-4383/+1(703)673-8894 Author of “Trees of the Brain, Roots of the Mind<http://www.amazon.com/Trees-Brain-Roots-Giorgio-Ascoli/dp/0262028980/>” (MIT Press, 2015<http://mitpress.mit.edu/books/trees-brain-roots-mind>) Founding Editor-in-Chief, Neuroinformatics<http://link.springer.com/journal/12021>

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BECNC 2018 Conference
by Narges Chinichian Dec. 2, 2017

Dec. 2, 2017

[Apologies for cross posting] Dear All I'm glad to announce that the "Brain Engineering & Computational Neuroscience Conference BECNC 2018" will be held on Jan 31 to Feb 2 in Tehran, Iran. Here is the link to register: https://becnc.ir/?page_id=452 <https://becnc.ir/?page_id=452> Keynote Speakers: Prof. Tipu Aziz (Oxford Univ., UK) Prof. Kenneth Miller (Columbia Univ., USA) Prof. Reza Shadmehr (JHU, USA) Prof. Pieter Roelfsema (NIN, Netherlands) Prof. Alexandre Pouget (Univ of Geneva) Prof. Susana Martinez-Conde (SUNY, USA) Prof. Susan J. Sara (College de France) Prof. Winrich Freiwald (Rockefeller Univ, USA) Prof. Gregor Rainer (Univ. of Fribourg, Switzerland) Prof. James Bisley (UCLA, USA) Prof. Qasim Zaidi (SUNY, USA) Prof. Yasser Roudi (NTNU, Norway) Prof. Valentin Dragoi (UT, USA) Prof. Frank Scharnowski (Univ. of Zürich, Switzerland) Prof. Alexander Thiele (Newcastle Univ., UK) Dr. Kamran Diba (Univ. of Michigan, USA) Dr. Ali Borji (UCF, USA) Dr. Qolamreza (Ray) Razlighi (Columbia Univ., USA) Dr. Morteza M. Goudarzi (MIT, USA) Dr. Koorosh Mirpour (UCLA, USA) Dr. Athena Akrami (Princeton Univ., USA) Dr. Yousef Salimpour (JHU, USA) Dr. Abbas Khani (Univ. of Geneva, Switzerland) see the complete list here: <http://goog_1578179254/> https://becnc.ir/?page_id=91 Dates & Deadlines: Abstract and full paper submission opening: November 4, 2017 Abstract submission deadline: January 10, 2018 Full paper submission deadline: January 11, 2018 Conference registration deadline: January 23, 2018 Late conference registration deadline (limited number): January 30, 2018 Main event: January 31 – February 2, 2018 There are also a workshop and a one-day course at the same time which you may like to attend. Find the details here: https://becnc.ir/?page_id=488 For more information, visit: https://becnc.ir/ Regards

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