- Comp-neuro - lists.cnsorg.org

Tutorial and Workshop on Neuron-Glial Interactions at the CNS*2022 (Melbourne, Australia)
by De Pitta, Maurizio June 24, 2022

June 24, 2022

Dear colleagues, Please mark them on your calendar. Share and disseminate into your networks. We are organizing a Tutorial and a Workshop on Computational Methods and Models of Neuron-Glial interactions, at the forthcoming Annual Meeting of the Organization of Computational Neurosciences (CNS*2022), in Melbourne, VIC, Australia. Both events will be in person. ***Tutorial on Models of Neuron-Glial Interactions*** Melbourne Convention and Exposition Center (MCEC) July 16, 2022; 9AM -- 6.15PM Session 1 (morning): Oligodendrocyte modeling Daniel Park, Afroditi Talidou, Jeremie Lefebvre (University of Ottawa, Canada) Session 2 (morning): Astrocytic Calcium modeling Hugues Berry (INRIA Lyon, France) Session 3 (afternoon): Tripartite synapses and neuron-glial networks Maurizio De Pitta (Krembil Research Institute, Canada) Session 4 (afternoon): Ionostasis at the tripartite synapses Marinus Toman, Liam McDaid (University of Ulster, Northern Ireland, UK) Please visit the Tutorial Website for more info: https://sites.google.com/view/cns2022-tutorial-on-modeling-n/home ***Workshop on Emerging Perspectives and Models on Neuron-Glial Interactions*** Melbourne Convention and Exposition Center (MCEC) July 19, 2022; 2PM -- 6PM July 20, 2022; 8:30AM -- 7:30PM Day 1: Hugues Berry, INRIA Lyon, France Corrado Cali, University of Turin, Italy David Gonsalvez, Monash University, Australia Leonid Savtchenko, University College London, The United Kingdom Tanya Tchumatchenko, University of Mainz Medical Center, Germany Day 2: Maurizio De Pittà, Krembil Research Institute, Canada Adi Doron, The Hebrew University of Jerusalem, Israel Jeremie Lefebvre, University of Ottawa, Canada Liam McDaid, Ulster University, Northern Ireland, The United Kingdom Ciaran Murphy-Royal, Université de Montréal, Canada Marlene Hao, The University of Melbourne, Australia Daniela Pietrobon, University of Padua, Italy Christine R. Rose, Heinrich Heine University, Germany Annalisa Scimemi, State University of New York at Albany, USA Please visit the Workshop Website for more info: https://sites.google.com/view/cns22-ngi-iworkshop/home To attend the Tutorial and the Workshop, Registration through the CNS*2022 is required: https://www.cnsorg.org/cns-2022-registration-fees We are looking forward to seeing you in Melbourne. Thank you for your consideration. Maurizio ----- Maurizio DE PITTA Principal Investigator Neuron-Glia Interactions Lab (NGILab) Krembil Research Institute, 4KD-509 60 Leonard Ave, Toronto, ON M5T 0S8, CA +1.416.603.5800 ext. 3290 This e-mail may contain confidential and/or privileged information for the sole use of the intended recipient. Any review or distribution by anyone other than the person for whom it was originally intended is strictly prohibited. If you have received this e-mail in error, please contact the sender and delete all copies. Opinions, conclusions or other information contained in this e-mail may not be that of the organization. If you feel you have received an email from UHN of a commercial nature and would like to be removed from the sender's mailing list please do one of the following: (1) Follow any unsubscribe process the sender has included in their email (2) Where no unsubscribe process has been included, reply to the sender and type "unsubscribe" in the subject line. If you require additional information please go to our UHN Newsletters and Mailing Lists page. Please note that we are unable to automatically unsubscribe individuals from all UHN mailing lists. Patient Consent for Email: UHN patients may provide their consent to communicate with UHN about their care using email. All electronic communication carries some risk. Please visit our website here<https://www.uhn.ca/PatientsFamilies/Patient_Safety_Advocacy/Privacy/Documen…> to learn about the risks of electronic communication and how to protect your privacy. You may withdraw your consent to receive emails from UHN at any time. Please contact your care provider, if you do not wish to receive emails from UHN.

1 0

Reminder: Free online CNS*2022 satellite tutorials: June 27--July 1
by Ankur Sinha June 23, 2022

June 23, 2022

Dear all, Apologies for the cross-posts. A final reminder of next week's CNS*2022 free online satellite tutorials (from June 27--July 1): https://ocns.github.io/SoftwareWG/pages/software-wg-satellite-tutorials-at-… Free registration remains open at: https://framaforms.org/incfocns-software-wg-cns2022-satellite-tutorials-reg… To prevent spam/zoom crashing, links to zoom meetings for the tutorial sessions will be limited to registrants only. Therefore, while registration is free, it is required. The satellite tutorials feature sessions on: - Arbor - Brian2 - Introduction to containers - EBRAINS - GeNN - Keras/TensorFlow - LFPy - MOOSE - Neo + Elephant - NEST - NetPyNE - NeuroLib - NeuroML - NEURON - OSBv2 - RateML Please spread the word, and we look forward to seeing you there! -- Thanks, Regards, Ankur Sinha (He / Him / His) | https://ankursinha.in Research Fellow at the Silver Lab, University College London | http://silverlab.org/ Free/Open source community volunteer at the NeuroFedora project | https://neuro.fedoraproject.org Time zone: Europe/London

1 0

Research assistant position in systems neuroscience (sleep and memory). Florida, USA
by Carmen Varela June 23, 2022

June 23, 2022

Hi, We have an opening for a research assistant in the laboratory of Dr. Carmen Varela (Psychology Department, Florida Atlantic University; https://www.varelalab.org/) to investigate sleep oscillations that correlate with memory consolidation and sleep quality. Sleep disruption is a common symptom of neurodegenerative and mental disorders and is thought to be linked to their progression. Thalamocortical activity during sleep is critical for the contribution of sleep to memory consolidation, but it is not clear what oscillatory and cellular activity patterns relate to sleep quality and memory consolidation. The candidate will assist with administrative and scientific aspects of this project, using rats to investigate the patterns of thalamic activity that promote healthy sleep function and memory consolidation. More generally, the lab uses state-of-the-art techniques to investigate the neural network mechanisms of cognitive behavior, with a focus on learning and memory and on the role of the neuronal circuits formed by the thalamus. *Keywords*: behaving rodent extracellular electrophysiology, sleep oscillations, learning and memory. Start date September 2022 (some flexibility). **** Requirements **** Interested candidates please send your curriculum and a brief description of your research interests to carmenv.work(a)gmail.com We are looking for team-oriented candidates, ideally with prior experience in rodent behavior. Candidates selected for an interview will be asked to provide contact information for two references. **** What you get **** · Work on exciting and impactful projects to understand the contribution of thalamic activity to sleep and memory. · Develop research skills using state-of-the-art systems neuroscience methods in rodents. · Mentorship, supportive lab environment, in a rapidly growing neuroscience campus. *Location**:* The Varela laboratory is located in FAU’s Jupiter campus, a rapidly growing neuroscience hub, which also hosts our partners the Max Planck Florida Institute for Neuroscience and Scripps Research Institute. FAU is an equal opportunity/affirmative action institution and all qualified applicants will receive consideration for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, disability status, protected veterans’ status or any other characteristic protected by law. Best, Carmen Varela, Ph.D. Assistant Professor Psychology Department Florida Atlantic University MC-19, room 106 Jupiter, FL 33458

1 0

Registration for the Bernstein Conference now open
by Bernstein Communication June 23, 2022

June 23, 2022

*** Apologies for cross-posting *** Dear colleagues, the registration for the Bernstein Conference 2022 (Sept 13-16, 2022) is now open. Register before July 24, 2022 to benefit from the Early Bird rate. Members of the Bernstein Network receive an additional discount. Register here: https://bit.ly/BC22_reg To foster the delightfully high participation of young scientists, we have travel grants available for students, doctoral candidates and Postdoc members of the Bernstein Network: Learn more here: https://bit.ly/BC_TravelGrants -- Each year the Bernstein Network invites the international computational neuroscience community to the annual Bernstein Conference for intensive scientific exchange. It has established itself as one of the most renown conferences worldwide in this field, attracting students, postdocs and PIs from around the world to meet and discuss new scientific discoveries. In 2022, the Bernstein Conference will take place as in-person meeting again in Berlin. Talks of the Main Conference are going to be livestreamed, given speakers consent. Find more information at https://bernstein-network.de/en/bernstein-conference/ ____ IMPORTANT DATES * Bernstein Conference: September 13 - 16, 2022 * Deadline for abstract submission: July 18, 2022 * Early Bird registration: July 24, 2022 * Late registration: August 28, 2022 * Onsite registration possible ____ ABSTRACTS We invite the computational neuroscience community to submit their abstracts: Submitted abstracts can either be considered as contributed talks or posters. All accepted abstracts will be published online and will be citable via Digital Object Identifiers (DOI). Further information can be found here: https://bit.ly/BC_submission ____ INVITED SPEAKERS Keynote Sonja Hofer (University College London, UK) Invited Talks Bing Brunton (University of Washington, USA) Christine Constantinople (New York University, USA) Carina Curto (Pennsylvania State University, USA) Liset M de la Prida (Instituto Cajal, Spain) Juan Alvaro Gallego (Imperial College London, UK) Mehrdad Jazayeri (Massachusetts Institute of Technology, USA) Gaby Maimon (The Rockefeller University, New York, USA) Andrew Saxe (University College London, UK) Henning Sprekeler (Technische Universität Berlin, Germany) Carsen Stringer (Janelia Research Campus, USA) ____ CONFERENCE COMMITTEE Raoul-Martin Memmesheimer (Conference Chair) Christian Machens (Program Chair) Tatjana Tchumatchenko (Program Vice Chair) Moritz Helias (Workshop Chair) Anna Levina (Workshop Vice Chair) & Megan Carey, Brent Doiron, Tatiana Engel, Ann Hermundstad, Christian Leibold, Timothy O'Leary, Srdjan Ostojic, Cristina Savin, Mark van Rossum, Friedemann Zenke. ____ For any further questions, please contact: bernstein.conference(a)fz-juelich.de ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Juelich GmbH 52425 Juelich Sitz der Gesellschaft: Juelich Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Volker Rieke Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender), Karsten Beneke (stellv. Vorsitzender), Prof. Dr. Astrid Lambrecht, Prof. Dr. Frauke Melchior ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Neugierige sind herzlich willkommen am Sonntag, den 21. August 2022, von 10:00 bis 17:00 Uhr. Mehr unter: https://www.tagderneugier.de

1 0

Apply now for EITN Fall School in Computational Neuroscience 2022
by Zélie Tournoud June 22, 2022

June 22, 2022

EITN School in Computational Neuroscience, 2022 session EITN School in Computational Neuroscience is an intensive computational neuroscience training aimed at neuroscience students and early-career researchers. It is supported by the Human Brain Project and is an oppotunity to learn from researchers from all over Europe. The 2022 edition will take place from *21 to 30 September 2022* in Paris, France. Attendance is selective as seats are limited. *Applications are open until 23 June 2022.* *Information : https://eitnschool2022.sciencesconf.org* Organizers: Sacha Van Albada (Forschungszentrum Jülich), Albert Gidon (Humboldt-Universität zu Berlin), Alain Destexhe (CNRS), Matteo di Volo (Cergy Université), Spase Petkoski (Aix-Marseille Université), Gorka Zamora-Lopez (Universitat Pompeu Fabra). Faculty: Nicolas Brunel Hermann Cuntz Gustavo Deco Alain Destexhe Matteo di Volo Albert Gidon Jennifer Goldman Moritz Helias Viktor Jirsa Maurizio Mattia Spase Petkoski Bartosz Telenczuk (to be confirmed) Sacha Van Albada Gorka Zamora-Lopez Damien Depannemaecker Domenico Guarino To be completed Who is this training for? * Neuroscience (and related fields) students and related * Post-doctoral/early-career researchers Why join? * 10 days of intensive training in computational neuroscience provided by researchers from all over Europe * Small scale event: get to connect! * A complete program: o Cellular models, and models of brain signals o Circuit models and networks o Mean-field models o Whole-brain models * Hands-on learning schedule based on: o Morning classes and tutorials o Group projects in the afternoon o Free time in the evenings to visit Paris How to apply? This training has a limited capacity of 20 students, therefor a selection will be performed by a scientific organizing committee. Applications are open until 23 June 2022. *Send your application by including a resume (CV) and cover letter (explaining motivations t**o join) by email at **eitn(a)neuro-psi.fr**.* You will receive a confirmation your application has be received within 5 working days or on the day application period closes (whichever comes the soonest). If not, please consider a technical issue and submit your application again. Contact eitn(a)neuro-psi.fr for any question or assistance. Selection criteria include: * Working or studying in neuroscience or related * Experience in python programming would help * Priority is given to PhD students as the primary target of this training, although Master students and post-docs are welcome to apply Practical information: * If selected, registration fee to attend the training is 400€. * If selected, you will need to bring your own laptop with a few pre-installed programs. * The tuition fee includes lunch, coffee, access to conference facilities and internet connection during the course days (Sunday not included). Location: Institut Supérieur Clorivière, 119 Bd Diderot, 75012 Paris. This training is design to be attended in-person in Paris. It will not be recorded nor accessible remotely. __________ * * *Zélie Tournoud*/// EITN Communication manager/ *European Institute for Theoretical Neuroscience (EITN)* UMR 9197 – *NeuroPSI*(Institut des Neurosciences Paris-Saclay) CNRS – Université Paris-Saclay Centre CEA Paris-Saclay Bâtiment 151 91400 Saclay https://www.eitn.org <https://www.eitn.org>

1 1

Reminder registration deadline: FENS satellite symposium "Understanding Neural Circuit Evolution" (Jul 7-8, 2022, in Paris and online)
by von Behren, Christina June 22, 2022

June 22, 2022

Dear all, The deadline for registration for the FENS satellite symposium "Understanding Neural Circuit Evolution" to be held in Paris and online on July 7-8 is fast approaching. Registration is free but mandatory, please see below and register by tomorrow, June 23. We are very much looking forward to meeting you in Paris and/or online! FENS satellite symposium "Understanding Neural Circuit Evolution" (July 7-8, 2022, Paris and online) The FENS satellite symposium "Understanding Neural Circuit Evolution" will present exciting lines of research into neural circuit evolution from paleobiology to computational neuroscience and to the molecular and genetic generation of neuro-behavioral diversity. Organized by the German Research Foundation Priority Program "Evolutionary Optimization of Neuronal Processing"<https://www.uni-goettingen.de/de/618311.html>, the symposium is designed to make the full spectrum of progress in neural circuit evolution accessible to a wide neuroscience audience. We aim to build bridges between computational, experimental, and paleobiological research approaches, and to foster integrative studies of neural circuit evolution. On July 7 the event starts with an online poster session. On July 8 there are exciting talks on the program, e.g. by Mitya Chklovskii (Flatiron Institute, New York, USA), Maude Baldwin (MPI Biological Intelligence, Seewiesen, Germany), and Lucia Prieto Godino (Francis Crick Institute, London, UK). The symposium is designed as a hybrid event. Registration will be open until June 23, 2022. For further information on program and registration see https://www.uni-goettingen.de/de/660201.html

1 0

International Symposium on AI and Brain Science 2022: Registration deadlines June 23 on-site and June 30 online
by Kenji Doya June 21, 2022

June 21, 2022

The registration deadline for the International Symposium on AI and Brain Science 2022 is June 23 for on-site and June 30 for online participation. http://www.brain-ai.jp/symposium2022/ The symposium is held on July 4th and 5th at Okinawa Institute of Science and Technology in a hybrid format as a satellite event for Neuro2022: https://neuro2022.jnss.org/en/ Tentative Program: time in JST=GMT+9 <Monday July 4th> 9:00 Registration 9:40 Opening: Kenji Doya 10:00-12:00 Session 1: AI for Brain Science Maneesh Sahani (Gatsby Unit) Angela Langdon (NIMH) Xiao-Jing Wang (NYU) Terrence Sejnowski (Salk Institute) 12:00-14:00 Lunch and Poster Session 14:00-16:00 Session 2: Biological and robotic motor control Chair: Hiroaki Gomi Tetsuya Ogata (Waseda U) Tom Macpherson (Osaka U) Jun Izawa (Tsukuba U) Rieko Osu (Waseda U) 16:30-18:30 Session 3: Brain-inspired AI Jun Tani (OIST) Masashi Sugiyama (RIKEN AIP) Yutaka Matsuo (U Tokyo) Aida Nematzadeh (DeepMind) <Tuesday July 5th> 10:00-12:00 Session 4: AI, Brain, and Society Ryota Kanai (ARAYA) Yoshua Bengio (U Montreal) Ai Koizumi (Sony CSL) Patricia Churchland (Salk Institute) 12:00-13:00 Lunch and Poster Session 13:00-15:00 Session 5: Natural and artificial consciousness Chair: Naotsugu Tsuchiya Hideaki Shimazaki (Hokkaido U) Keisuke Suzuki (Hokkaido U) Makiko Yamada (QST) Tadahiro Taniguchi (Ritsumeikan U) 15:30-17:30 Session 6: Unifying models of cognition Chair: Tadahiro Taniguchi Misako Komatsu (Tokyo Tech) Karl Friston (UCL) Yuichi Yamashita (NCNP) Matthew Botvinick (DeepMind) 17:30-18:00 General Discussion - Closing Co-organizers: Kenji Doya (Okinawa Institute of Science and Technology) Karl Friston (University College London) Hiroaki Gomi (NTT Communication Science Laboratories) Takao Hensch (The University of Tokyo International Research Center for Neurointelligence) Maneesh Sahani (Gatsby Computational Neuroscience Unit) Masashi Sugiyama (RIKEN Center for Advanced Intelligence Project) Tadahiro Taniguchi (Ritsumeikan University) Naotsugu Tsuchiya (Monash University) Secretariat: Neural Computation Unit, OIST: ncus(a)oist.jp<mailto:ncus@oist.jp> ---- Kenji Doya <doya(a)oist.jp<mailto:doya@oist.jp>> Neural Computation Unit, Okinawa Institute of Science and Technology Graduate University 1919-1 Tancha, Onna, Okinawa 904-0495, Japan Phone: +81-98-966-8594; Fax: +81-98-966-2891 https://groups.oist.jp/ncu

1 0

how can we improve model discovery?
by McDougal, Robert June 19, 2022

June 19, 2022

For over 25 years, ModelDB (modeldb.yale.edu<http://modeldb.yale.edu>) has provided a model sharing and discovery service for the computational neuroscience community. We’re in the process of revising our website, and we’d like to make sure we address the evolving needs and expectations of the community. Personally, I’m interested in making it easier to do analysis across the collection of models. What about you? Whatever your career stage is, please help ModelDB help you by filling out a brief survey: https://yalesurvey.ca1.qualtrics.com/jfe/form/SV_3EkPlMkOUDV5xgW Thanks for your help, Robert McDougal ModelDB

1 0

Call for Papers: Mathematics of Neuroscience Symposium, Crete, Greece, 24-25th September 2022
by Ruairidh McLennan Battleday June 17, 2022

June 17, 2022

------------------ Symposium on the Mathematics of Neuroscience. Crete, Greece, 24-25th September 2022 (www.neuromonster.org) Two decades into the 21st century, can we claim to be any closer to a unified model of the brain? In this exploratory symposium, we invite submissions for short talks and posters presenting general mathematical models of brain function. We give priority to those models that account for brain or behavioural data, or provide simulations to that effect. This year’s theme is life-long learning and discovery. Keynote Speakers Professor Peter Dayan (Director, Department of Computational Neuroscience, Max Planck Institute for Biological Cybernetics, Tübingen) “Learning from scratch: Non-parametric models of task acquisition over the long run” Professor Andrew Adamatzky (Director, Unconventional Computing Laboratory, University of the West of England) “Fungal Brain” Symposium Chairs Professor Dan V. Nicolau (King’s College London) Dr Ruairidh McLennan Battleday (Princeton University) Invited Talks Professor Kobi Kremnitzer (University of Oxford) Professor Marc Howard (Boston University) Professor Kevin Burrage (Queensland University of Technology) Professor Rahul Bhui (MIT) Dr Jonathan Mason (University of Oxford) Dr James Whittington (University of Oxford / Stanford) Dr Ilia Sucholutsky (Princeton University) Dr Sophia Sanborn (UC Berkeley, UC Santa Barbara, University of British Columbia) Dr Christina Merrick (UC San Francisco) Dr Timothy Muller (UCL) Prize Talks Dr Aenne Brielmann (Max Planck Institute, Tübingen) Andrew Ligeralde (Redwood Center for Theoretical Neuroscience, University of California, Berkeley) The symposium will be held virtually or in-person on the island of Crete, Greece from the 24-25th of September 2022 (www.neuromonster.org) Submission is by 250-word abstract before the 23rd July 2022, emailed to the organizers Professor Dan V. Nicolau Jr (dan.nicolau(a)kcl.ac.uk) and Dr Ruairidh M. Battleday (battleday(a)princeton.edu) ------------------

1 0

ASTROTECH PhD Position on Ion diffusion in the Neuron-glial vascular unit @BCAM (Spain) [Immediate hiring]
by Maurizio De Pitta June 16, 2022

June 16, 2022

Dear colleagues, Please share and disseminate into your networks, department, and Institute. The Basque Center for Applied Mathematics (BCAM), located in Bilbao (Spain), is recruiting a Ph.D. student for a 3-year project in Computational Neurobiology within the framework of the H2020 ASTROTECH International Training Network (http://www.astrotechproject.eu/) The student will be based in Bilbao (Spain) and enroll in the Graduate Program in Neuroscience of the Faculty of Medicine of the University of the Basque Country. They will work under my supervision and that of Christophe Bernard (Aix-Marseille University, France). The project revolves around modeling the neuron-glial-vascular unit, focusing on epilepsy and neurodegeneration and emphasizing clinical technologies. This is an excellent opportunity for ambitious and brilliant candidates to gain expertise in the emerging field of computational modeling of neuron-glial interactions in an exceptional international setting. The average annual salary for this position is 28k-30k EUR/yr and comes with benefits and a generous budget for traveling to scientific events related to the project. Hiring is immediate, with a planned starting date of Sep-Oct 2022. Please prompt anyone who could be interested in reaching out to me at this email address or maurizio.depitta(a)uhnresearch.ca. More information about the Ph.D. project, along with eligibility requirements, can be found here: https://euraxess.ec.europa.eu/jobs/800279 Applications must be submitted here: http://www.bcamath.org/en/research/job/phd-position-for-h2020-project-astro… The application deadline is July 15, 2022, at 2 pm CET (UTC+2). Thanks for your consideration. Maurizio ----- Maurizio DE PITTA Scientist, Krembil Research Institute External Scientific Member, Basque Center of Applied Mathematics https://sites.google.com/site/mauriziodepitta/home

1 0

Community feedback requested: the Neo object model
by INCF June 16, 2022

June 16, 2022

*Call for community feedback on the Neo object model for electrophysiology and optophysiology data - open until August 14, 2022* INCF is taking a leading role in endorsing and promoting standards and best practices (SBPs) for global neuroscience <https://link.springer.com/article/10.1007/s12021-020-09509-0>, as part of our mission to promote data reuse and reproducibility in brain research. SBP’s are nominated by the community and reviewed by the INCF SBP Committee according to our criteria <https://incf.org/incf-standards-review-criteria-v20> for a FAIR community standard. If they meet our criteria, we put them up for 60 days of community review to gauge the level of user support and to identify possibilities for improvement and potential weaknesses. For the next 60 days (Closing date: August 14, 2022), we are seeking community feedback on whether we should endorse the Neo object model <https://www.incf.org/sbp/neo> as a standard. Neo <https://www.incf.org/sbp/neo> is an object model for handling electrophysiology data in multiple formats. It is suitable for representing data acquired from electroencephalographic, intracellular, or extracellular recordings, or generated from simulations. Neo has been implemented as a Python package for working with electrophysiology data, together with support for reading a wide range of neurophysiology file formats (including Spike2, NeuroExplorer, AlphaOmega, Axon, Blackrock, Plexon, Tdt, Igor Pro), and support for writing to a subset of these formats plus non-proprietary formats including Kwik and HDF5. Should Neo be endorsed as a standard? Comments open until Aug 14: f1000research.com/documents/11-658 Read more about Neo: Project page <https://neuralensemble.org/neo/> Documentation <https://neo.readthedocs.io/en/stable/> Github <https://github.com/NeuralEnsemble/python-neo> Paper <https://www.frontiersin.org/articles/10.3389/fninf.2014.00010/full>

1 0

Last Call: Abstract submission for the Bernstein Conference
by Bernstein Communication June 14, 2022

June 14, 2022

**Apologies for cross-posting** Dear colleagues, The deadline to submit abstracts to be considered as contributed talks at the Bernstein Conference is tomorrow, June 15. Abstract drafts created until tomorrow can be finalized until Sunday, June 19. Submit your abstract here: https://bit.ly/BC_submission Each year the Bernstein Network invites the international computational neuroscience community to the annual Bernstein Conference for intensive scientific exchange. It has established itself as one of the most renown conferences worldwide in this field, attracting students, postdocs and PIs from around the world to meet and discuss new scientific discoveries. In 2022, the Bernstein Conference will take place as in-person meeting again in Berlin. Talks of the Main Conference are going to be livestreamed, given speakers consent. Find more information at https://bernstein-network.de/bernstein-conference/ ____ IMPORTANT DATES * Bernstein Conference: September 13 - 16, 2022 * Deadline for submission of abstracts to be considered for Contributed Talks: June 15, 2022 * Deadline for abstract submission: July 18, 2022 ____ ABSTRACTS We invite the computational neuroscience community to submit their abstracts: Submitted abstracts can either be considered as contributed talks or posters. All accepted abstracts will be published online and will be citable via Digital Object Identifiers (DOI). Further information can be found here: https://bit.ly/BC_submission ____ INVITED SPEAKERS Keynote Sonja Hofer (University College London, UK) Invited Talks Bing Brunton (University of Washington, USA) Christine Constantinople (New York University, USA) Carina Curto (Pennsylvania State University, USA) Liset M de la Prida (Instituto Cajal, Spain) Juan Alvaro Gallego (Imperial College London, UK) Mehrdad Jazayeri (Massachusetts Institute of Technology, USA) Gaby Maimon (The Rockefeller University, New York, USA) Andrew Saxe (University College London, UK) Henning Sprekeler (Technische Universität Berlin, Germany) Carsen Stringer (Janelia Research Campus, USA) ____ CONFERENCE COMMITTEE Raoul-Martin Memmesheimer (Conference Chair) Christian Machens (Program Chair) Tatjana Tchumatchenko (Program Vice Chair) Moritz Helias (Workshop Chair) Anna Levina (Workshop Vice Chair) & Megan Carey, Brent Doiron, Tatiana Engel, Ann Hermundstad, Christian Leibold, Timothy O'Leary, Srdjan Ostojic, Cristina Savin, Mark van Rossum, Friedemann Zenke. ____ For any further questions, please contact: bernstein.conference(a)fz-juelich.de ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Juelich GmbH 52425 Juelich Sitz der Gesellschaft: Juelich Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Volker Rieke Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender), Karsten Beneke (stellv. Vorsitzender), Prof. Dr. Astrid Lambrecht, Prof. Dr. Frauke Melchior ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Neugierige sind herzlich willkommen am Sonntag, den 21. August 2022, von 10:00 bis 17:00 Uhr. Mehr unter: https://www.tagderneugier.de

1 0

State of the Art Methods for Brain Data Analysis
by Dimitris Pinotsis June 14, 2022

June 14, 2022

State of the Art Methods for Brain Data Analysis- A workshop for computational, theoretical and cognitive neuroscientists taking place on July 6 at City— Universıty of London.versıty of London. . This hybrid workshop will discuss the state of the art methods in brain imaging and how they inform our understanding of the neural basis of behaviour and cognition. It will be of interest to computational and cognitive neuroscientists who are keen on brain imaging, computational psychiatry and network-level dynamics. Registration is free. To register, please fill in this form. For any questions, please email braindatanalysis(a)gmail.com Further details: This hybrid workshop will discuss the state of the art methods in brain imaging and how they inform our understanding of the neural basis of behaviour and cognition. It will review techniques that allow us to access large-scale brain networks, based on deep neural networks, dynamical systems and probabilistic inference. It will also provide updates about how recent developments allow us to map and modulate brain activity and understand how information processing breaks down in disease.

1 0

PhD and postdoctoral positions at the Technical University of Munich
by Gjorgjieva, Julijana June 14, 2022

June 14, 2022

We invite applications for PhD and postdoctoral positions at the Computation in Neural Circuits group led by Prof. Julijana Gjorgjieva at the Technical University of Munich in Germany. Using mathematical and computational approaches, we study how neurons and the synaptic connections between them tune their properties during early development and young life to ensure appropriate network dynamics and behavior. Another interest relates to how adult function and behavior emerge from a diversity of mechanisms, including synaptic plasticity, sensory noise, and biophysical constraints. We address these questions at different spatial scales, from the organization of individual synaptic inputs on dendrites to large-scale networks of higher order cortex. We are especially interested in these processes during development before and shortly after birth when the brain is highly plastic, but general aspects of learning and memory, especially under naturalistic stimuli and behaviors are also of interest. We collaborate with different experimental research groups in the US, UK, Netherlands, Spain and Germany and benefit from interactions with the strong neuroscience community in Munich, including the SyNergy Cluster of Excellence. Our applications range across animals from rodent to Drosophila to reptiles and humans. Successful applicants can choose from a range of projects including theoretical model development and analytical calculations, numerical simulations, and applications to rich datasets from collaborating labs. Open topics include: - Formation and co-organization of excitatory and inhibitory synaptic inputs on dendrites, including dendritic growth, receptive field formation and alignment, and emergence of tuning. - Development of biophysical models of synaptic plasticity at the cellular and subcellular levels and investigation of their functional consequences. - Reliable top-down modulation of network dynamics during synaptic plasticity, including interactions between different information streams. - Mechanistic dissection of cortical computations driven by different cell types, especially interneurons. - Modeling network attractor states of resilience, and synaptic and homeostatic plasticity processes to rebalance network states after perturbation. Please check our website for recent publications: https://www1.ls.tum.de/compneuro/publications/ Applicants should have a strong quantitative background (in mathematics, physics, engineering, computer science, or related fields) and excellent programming skills (Julia, Python, Matlab or C/C++). The positions can start at any time. For more information or an informal discussion, email me at gjorgjieva(a)tum.de<mailto:gjorgjieva@tum.de>. To apply for these positions, please email the following: 1. A curriculum vitae 2. A description of research interests, including a motivation for why you chose to apply to our group 3. A writing sample, either a paper or code 4. Contact details for 2-3 referees 5. Transcripts (if applying for a PhD position) ----------------------------------------- Julijana Gjorgjieva, PhD Associate Professor of Computational Neuroscience Technical University of Munich Maximus-von-Imhof-Forum 3 85354 Freising, Germany Research Group Leader Max Planck Institute for Brain Research Frankfurt, Germany office: +49 8161 71 2709 https://www1.ls.tum.de/compneuro

1 0

invitation to join an open collaborative comp neuro research project
by Goodman, Daniel F M June 13, 2022

June 13, 2022

Hi everyone, We have started a new collaborative, open comp neuro research project (in the spirit of the Polymath project<https://en.wikipedia.org/wiki/Polymath_Project> that was a huge success in mathematics). Everyone is invited to participate, and anyone who does contribute will get to be an author. Some details below, but you can just jump straight in to the website and take a look here: https://comob-project.github.io/snn-sound-localization/ The idea is to experiment with doing science in the spirit of collaboration rather than competition. We've set up an initial research topic and some code/results, and then you choose what direction you want to take, get feedback from others and give feedback to them on their ideas. We have an infrastructure that makes all contributions appear automatically on the website. We're running a discussion group, and planning local workshops. The first one of those will be in Paris on July 8th, just before FENS. This project grew out of my Cosyne tutorial<https://neural-reckoning.github.io/cosyne-tutorial-2022/> on using machine learning methods with spiking neural networks (surrogate gradient descent). It's a relatively easy topic to get into and a lot of low hanging fruit to pick, so hopefully ideal for this approach. If you watch the tutorial video and run the notebooks, you're already at the boundary of new research. Contributing is super easy. Go to our GitHub repo, open it up and start running the code on Google Colab (one click, no local installation required). Use one of the existing notebooks to start your own, commit the changes (via pull request for the first one), and your notebook automatically appears on the website. Detailed instructions on the website<https://comob-project.github.io/snn-sound-localization/Contributing.html>. Thanks, and hope to see your contributions and discussion soon! Dan Goodman<http://neural-reckoning.org/> Tomas Fiers<https://tomasfiers.net/> Marcus Ghosh<https://neural-reckoning.org/marcus_ghosh.html> Rory Byrne<https://twitter.com/ryrobyrne>

1 0

08 July 22 FENS satellite event: 'EBRAINS Research Infrastructure Symposium'
by Zélie Tournoud June 13, 2022

June 13, 2022

Dear everyone, Please find below the announcement of EBRAINS FENS Satellite event 'EBRAINS Research Infrastructure Symposium: addressing grand challenges in brain research'. In between sessions, it will be possible to visit the EBRAINS showroom with hands-on demonstrations of the platform co-organized by EITN. Registration is free but mandatory to attend, see information below. Have an excellent day, *Zélie Tournoud*/ EITN Communication manager/ *European Institute for Theoretical Neuroscience (EITN)* UMR 9197 –*NeuroPSI*(Institut des Neurosciences Paris-Saclay) CNRS – Université Paris-Saclay Centre CEA Paris-Saclay Bâtiment 151 91400 Saclay https://www.eitn.org <https://www.eitn.org/> _____ EBRAINS is organising a satellite event at the FENS Forum 2022 on 8 July from 8:30 – 17:30 CEST. The EBRAINS FENS satellite event, 'EBRAINS Research Infrastructure Symposium: addressing grand challenges in brain research', aims to bring together experimental, clinical and computational neuroscientists. The programme is structured to highlight the bridges between basic and clinical neuroscience and computational neuroscience. It will be structured therefore around four sessions on why, what, how and where to integrate multi-resolution and multi-scale data for neuroscience research. The seminar will be held on July, 8 at INSPE, rue Molitor in Paris (https://www.inspe-paris.fr/visite-virtuelle) Programme: • 08:30 Get-together: Coffee and mingling • 09:00 INTRODUCTION • 09:20 SESSION 1: What are the grand challenges in basic and human neuroscience that currently hamper reproducible the integrating multiscale, multilevel data in a new data infrastructure with tools allowing researchers to use these data. • 10:30 Coffee & posters, EBRAINS showroom • 11:00 SESSION 2: The solutions implemented in EBRAINS Research Infrastructure • 12:30 LUNCH & posters, EBRAINS showroom • 13:30 SESSION 3: Success stories from experimentalists, clinicians, modelers: neuroscience research examples empowered by EBRAINS • 15:15 Coffee & posters, EBRAINS showroom • 16:00 SESSION 4: Perspectives and future • 17:00 – 18:00 ROUND TABLE and summary Registration: Registration is free but mandatory. Register here: https://ebrains.eu/fens-satellite-event/

1 0

“TEX2022: Bringing together Predictive Processes and Statistical Learning” Abstract submission deadline extended
by Yamil Vidal June 13, 2022

June 13, 2022

Dear all, The abstract submission deadline for “TEX2022: Bringing together Predictive Processes and Statistical Learning” has been extended to the 19th of June!! We welcome the submission of abstracts presenting work in the fields of Predictive Processes and Statistical Learning. Work at the interception of these two fields will be particularly appreciated. The results of the evaluation procedure will be announced on the 27th of June. All presentations will be done in person. Presenters of accepted abstracts will be required to register to the event no later than 10th of July. As the event is limited to 100 attendees, we recommend to register early in order to secure a spot. Invited Speakers: - Maria Chait - Lori Holt - Floris de Lange - Clare Press - Lucia Melloni - Ram Frost - Nicola Molinaro - Caspar Schwiedrzik Scientific Committee: - Alejandro Blenkmann - Louisa Bogaerts - Fabienne Chetail - Abhishek Banerjee - Emma Holmes - Dezső Németh You can find more information at the event’s website: https://indico.sissa.it/e/TEX2022 If you are active on Twitter, please consider retweeting the event’s announcement: https://twitter.com/CrepaldiLab/status/1536292945275629568 We look forward to welcoming you to Trieste this summer! With best regards, Yamil Vidal and Davide Crepaldi Dr. Yamil Vidal Predictive Brain Lab Centre for Cognitive Neuroimaging - Donders Institute Nijmegen the Netherlands

1 0

Open PhD position in mathematical/computational modeling of endocannabinoid-mediated synaptic plasticity
by Hugues Berry June 10, 2022

June 10, 2022

Dear colleagues, A PhD position is open in my team at Inria Lyon, France on the modelling of endocannabinoid-mediated synaptic plasticity and its implication in fast learning. The research is a collaboration with the Venance Lab, Centre Interdisciplinaire de Recherche en Biology, Collège de France, Paris. We are looking for a highly motivated candidate with a background in mathematical modelling, dynamical systems, computational neuroscience or computational systems biology and a solid appetite for interactions with experimental neuroscience data. The starting date must be between September and November 2022. More information can be found here: http://www.inrialpes.fr/Berry/Images/PhD_Proposal_2022.pdf Contact me directly for applications. Best regards, Hugues BERRY ------------------------ Deputy scientific director of Inria for digital health and biology Inria Batiment CEI-2 56 Blvd Niels Bohr CS 52132 69603 Villeurbanne cedex France Tel. (Office): +33 (0)4 72 43 75 01 Tel. (Mobile): + 33 (0)6 70 77 63 39 www.inrialpes.fr/Berry hugues.berry(a)inria.fr

1 0

FENS satellite symposium "Understanding Neural Circuit Evolution" (Jul 7-8, 2022, in Paris and online)
by von Behren, Christina June 10, 2022

June 10, 2022

Dear all, We are happy to announce our FENS satellite symposium "Understanding Neural Circuit Evolution" which will be taking place July 7-8, 2022, in Paris and online. Registration for attending in person or remotely is open until June 23, 2022. The FENS satellite symposium "Understanding Neural Circuit Evolution" will present exciting lines of research into neural circuit evolution from paleobiology to computational neuroscience and to the molecular and genetic generation of neuro-behavioral diversity. Organized by the German Research Foundation Priority Program "Evolutionary Optimization of Neuronal Processing"<https://www.uni-goettingen.de/de/618311.html>, the symposium is designed to make the full spectrum of progress in neural circuit evolution accessible to a wide neuroscience audience. We aim to build bridges between computational, experimental, and paleobiological research approaches, and to foster integrative studies of neural circuit evolution. On July 7 the event starts with an online poster session. On July 8 there are exciting talks on the program, e.g. by Mitya Chklovskii (Flatiron Institute, New York, USA), Maude Baldwin (MPI Biological Intelligence, Seewiesen, Germany), and Lucia Prieto Godino (Francis Crick Institute, London, UK). The symposium is designed as a hybrid event. Registration will be open until June 23, 2022. For further information on program and registration see https://www.uni-goettingen.de/de/660201.html We are very much looking forward to meeting you in Paris (or on the internet). **************** Dr. Britta Korkowsky Coordinator Goettingen Campus Institute for Dynamics of Biological Networks (CIDBN) Bernstein Center for Computational Neuroscience Goettingen Graduate Program in Theoretical and Computational Neuroscience SPP 2205 Evolutionary Optimization of Neuronal Processing University of Goettingen Heinrich-Düker-Weg 12 37073 Göttingen Tel.: +49-551-39-26675

1 0

Workshop on Trustworthy Artificial Intelligence (CFP)
by Frédéric Jurie June 9, 2022

June 9, 2022

================================================================== Call for Papers: Workshop on Trustworthy Artificial Intelligence, as a part of the ECML/PKDD 22 program. ================================================================== Held in conjunction with ECMLPKDD (https://2022.ecmlpkdd.org/) Website: https://trustworthy-ai-22.sciencesconf.org/ Extended Abstract submission deadline: June 20, 2022 Author notification: July 13, 2022 Camera-ready submission: September 2, 2022 The site will start accepting submissions on May 1, 2022. Workshop date: September 19, 2022 (morning) Location: Grenoble (France), on site workshop with remote connections available About: This workshop will conduct a reflection on the methods and principles allowing the integration of artificial intelligence in critical products and services in a safe, reliable and secure way. Particular attention will be paid to methods for the engineering of innovative industrial products and services integrating AI, the large-scale deployment of industrial systems, as integrating AI is a crucial issue for industrial competitiveness. The scientific challenges include, as example, the construction of AI components with controlled confidence, the construction of data/knowledge to increase trustworthiness in learning or the interaction generating confidence between the user and the AI-based system. Authors are invited to submit their original work in this field and thus contribute to the reflections that will be conducted. The workshop will include oral and poster presentations and will leave a lot of room for exchange and discussion between participants. Topics: - AI based Critical Systems, - Auditability & Accountability, - Explainability and quantitative evaluation of Explainable AI methods, - Non-discrimination & Fairness, - Operational Domain Definition with AI, - Out of Distribution Detection, - Safety & Robustness, - Social Acceptance of Trustworthy AI Systems - System Monitoring, - Trustworthy AI - Trustworthy Human-Computer Interactions Program Committee: - Christine Balagué, Institut Mines Télécom, Palaiseau, France - Bertrand Braunschweig, IRT System X, Palaiseau, France (Workshop Chair) - Elisa Fromont, Univ. Rennes, IUF, Inria, CNRS, IRISA, Rennes, France - Fosca Gianotti, Information Science and Technology Institute “A. Faedo” of the National Research Council, Pisa, Italy - Frédéric Jurie, IRT System X, Palaiseau, France (Workshop Chair) - Foutse Khomh, Polytechnique Montréal, Canada - Clodéric Mars, AI Redefined, Montréal, Canada - Matthias Jakobs, TU Dortmund, Germany - Claire Pagetti, Onera, Toulouse, France - Wojciech Samek, Department of Artificial Intelligence and the Explainable AI Group at Fraunhofer Heinrich Hertz Institute (HHI), Berlin, Germany - Stefan Wrobel, Fraunhofer Institute for Intelligent Analysis andInformation Systems IAIS, Sankt Augustin, Germany

1 0

Free registration is now open for CNS*2022 satellite tutorials: June 27--July 1
by Ankur Sinha June 8, 2022

June 8, 2022

Dear all, Apologies for the cross-posts. The INCF/OCNS Software Working Group is happy to announce that the schedule for the CNS*2022 satellite tutorials from June 27--July 1 has now been published here: https://ocns.github.io/SoftwareWG/pages/software-wg-satellite-tutorials-at-… Free registration is also now open at: https://framaforms.org/incfocns-software-wg-cns2022-satellite-tutorials-reg… To prevent spam/zoom crashing, links to zoom meetings for the tutorial sessions will be limited to registrants only. Therefore, while registration is free, it is required. The satellite tutorials feature sessions on: - Arbor - Brian2 - Introduction to containers - EBRAINS - GeNN - Keras/TensorFlow - LFPy - MOOSE - Neo + Elephant - NEST - NetPyNE - NeuroLib - NeuroML - NEURON - OSBv2 - RateML Please spread the word, and we look forward to seeing you there! -- Thanks, Regards, Ankur Sinha (He / Him / His) | https://ankursinha.in Research Fellow at the Silver Lab, University College London | http://silverlab.org/ Free/Open source community volunteer at the NeuroFedora project | https://neuro.fedoraproject.org Time zone: Europe/London

1 0

Workshop on Bio-inspired active AI at CNS*2022 - call for contributed talks
by Thomas Nowotny June 7, 2022

June 7, 2022

Dear all, we will run a workshop on Bio-inspired active AI on Wed. 20 July 2022 at CNS*2022 in Melbourne. The details of the workshop topic are below and a preliminary list of invited talks is at http://users.sussex.ac.uk/~tn41/CNS2022_workshop/ We have time for some contributed talks and invite submissions of short titles/ abstracts. Please send your submission to me (t.nowotny(a)sussex.ac.uk) by Thursday, 30th June 2022. There is one workshop fee waiver available for an early career researcher if they are accepted for a contributed talk. Thanks & kind regards, Thomas --- CNS*2022 Workshop on Bio-inspired active AI<http://users.sussex.ac.uk/~tn41/CNS2022_workshop/> Recent advances in AI and notably in deep learning, have proven incredibly successful in creating solutions to specific complex problems (e.g. beating the best human players at Go, and driving cars through cities). But as we learn more about these approaches, their limitations are becoming more apparent in terms of high energy consumption, fragility, and lack of transferability between tasks. These limitations are particularly apparent when contrasted with naturally evolved intelligence. While no animals can play Go or drive cars, they are incredibly good at doing what they have evolved to do. For instance, ants learn how to forage effectively despite their tiny brains and minimal exploration of their world. We argue this difference comes about because natural intelligence is a property of closed-loop brain-body-environment interactions. Evolved innate behaviours in concert with specialised sensors and neural circuits extract and encode task-relevant information with maximal efficiency, aided by mechanisms of selective attention that focus learning on task-relevant features. In this workshop, we will explore how we can learn from mini-brains, and computational models to better understand intelligence and pave the pathway to building better AI. -- Prof. Thomas Nowotny Head of AI Research Group CCNR, Sussex Neuroscience Phone: +44-1273-678593 Engineering and Informatics, Fax: +44-1273-877873 University of Sussex, Falmer, Brighton BN1 9QJ sussex.ac.uk/informatics/tnowotny<http://sussex.ac.uk/informatics/tnowotny> <../../owa/redir.aspx?C=9e11bb0e527242938402b42d9b5498ea&URL=http%3a%2f%2fsussex.ac.uk%2finformatics%2ftnowotny> I support the University of Sussex Community Pledge, as I continue to help those around me during the pandemic. Small acts of collaboration, kindness and integrity can make a big difference. www.sussex.ac.uk/community-pledge<http://www.sussex.ac.uk/community-pledge>

1 0

Information theory workshop at CNS*2022 -- call for contributed talks
by Joseph Lizier June 7, 2022

June 7, 2022

Dear all, We are pleased to announce that the Workshop on Methods of Information Theory in Computational Neuroscience<https://bit.ly/cns2022itw> will be held once again at the 31st Annual Computational Neuroscience Meeting (CNS*2022<https://www.cnsorg.org/cns-2022-quick> conference), in Melbourne, Australia. The workshop will be held during sessions over the final two days of the main conference, July 19 and 20, 2022. Our confirmed speakers so far include the following: * Tomás̆ Bárta, Academy of Sciences of the Czech Republic * Demian Battaglia, Aix-Marseille University * Demi Gao, The University of Melbourne * Tatiana Kameneva, Swinburne University, Melbourne * Leonardo Novelli, Monash University, Melbourne * Naotsugu Tsuchiya, Monash University, Melbourne * Masanori Shimono, Kyoto University * ... more TBA! We would like to call for further contributions<https://bit.ly/cns2022itwcall> of talks. If you are interested in contributing a talk, please send a title and abstract to Joseph Lizier (joseph.lizier(a)sydney.edu.au<mailto:joseph.lizier@sydney.edu.au>). Earlier submissions and those from female/minority speakers will be prioritised. Please pay attention to the registration for CNS*2022 (early bird deadlines and fees) as workshop registration at least is required for attendance, and see our website https://bit.ly/cns2022itw for more details. We hope you will join us there! Organising Committee: Joseph Lizier (chair) Abdullah Makkeh Justin Dauwels Michael Wibral

1 0

Abstract submission deadline for “TEX2022: Bringing together Predictive Processes and Statistical Learning”
by Yamil Vidal June 6, 2022

June 6, 2022

Dear all, The abstract submission deadline for “TEX2022: Bringing together Predictive Processes and Statistical Learning” is this Friday (10th of June)!! We welcome the submission of abstracts presenting work in the fields of Predictive Processes and Statistical Learning. Work at the interception of these two fields will be particularly appreciated. We are glad to introduce the members of our Scientific Committee, who will evaluate the submitted abstracts: - Alejandro Blenkmann (Front Neurolab - RITMO, Department of Psychology, University of Oslo) - Louisa Bogaerts (Department of Experimental Psychology, Ghent University) - Fabienne Chetail (Lab Cognition Langage et Développement (LCLD), CRCN, Université Libre de Bruxelles) - Abhishek Banerjee (Adaptive Decisions Lab, Biosciences Institute, Newcastle University - https://www.adaptive-decisions.com/) - Emma Holmes (Department of Speech Hearing and Phonetic Sciences, UCL. Wellcome Centre for Human Neuroimaging, UCL) - Dezső Németh (Lyon Neuroscience Research Center (CRNL), Université Claude Bernard Lyon 1 - https://www.memoteam.org/) The results of the evaluation procedure will be announced on the 27th of June. All presentations will be done in person. Presenters of accepted abstracts will be required to register to the event no later than 10th of July. As the event is limited to 100 attendees, we recommend registering early in order to secure a spot. You can find more information at the event’s website: https://indico.sissa.it/e/TEX2022 If you are active on Twitter, please consider retweeting the event’s announcement: https://twitter.com/CrepaldiLab/status/1512412553942601740 We look forward to welcoming you to Trieste this summer! With best regards, Yamil Vidal and Davide Crepaldi Dr. Yamil Vidal Predictive Brain Lab Centre for Cognitive Neuroimaging - Donders Institute Nijmegen the Netherlands

1 0

Reminder: Call for abstracts Bernstein Conference
by Bernstein Communication June 6, 2022

June 6, 2022

**Apologies for cross-posting** Dear colleagues, this is a gentle reminder to submit your abstract to be considered as contributed talk for the Bernstein Conference before June 15 here: https://bit.ly/BC_submission Each year the Bernstein Network invites the international computational neuroscience community to the annual Bernstein Conference for intensive scientific exchange. It has established itself as one of the most renown conferences worldwide in this field, attracting students, postdocs and PIs from around the world to meet and discuss new scientific discoveries. In 2022, the Bernstein Conference will take place as in-person meeting again in Berlin. Talks of the Main Conference are going to be livestreamed, given speakers consent. Find more information at https://bernstein-network.de/bernstein-conference/ ____ IMPORTANT DATES * Bernstein Conference: September 13 - 16, 2022 * Deadline for submission of abstracts to be considered for Contributed Talks: June 15, 2022 * Deadline for abstract submission: July 18, 2022 ____ ABSTRACTS We invite the computational neuroscience community to submit their abstracts: Submitted abstracts can either be considered as contributed talks or posters. All accepted abstracts will be published online and will be citable via Digital Object Identifiers (DOI). Further information can be found here: https://bit.ly/BC_submission ____ INVITED SPEAKERS Keynote Sonja Hofer (University College London, UK) Invited Talks Bing Brunton (University of Washington, USA) Christine Constantinople (New York University, USA) Carina Curto (Pennsylvania State University, USA) Liset M de la Prida (Instituto Cajal, Spain) Juan Alvaro Gallego (Imperial College London, UK) Mehrdad Jazayeri (Massachusetts Institute of Technology, USA) Gaby Maimon (The Rockefeller University, New York, USA) Andrew Saxe (University College London, UK) Henning Sprekeler (Technische Universität Berlin, Germany) Carsen Stringer (Janelia Research Campus, USA) ____ CONFERENCE COMMITTEE Raoul-Martin Memmesheimer (Conference Chair) Christian Machens (Program Chair) Tatjana Tchumatchenko (Program Vice Chair) Moritz Helias (Workshop Chair) Anna Levina (Workshop Vice Chair) & Megan Carey, Brent Doiron, Tatiana Engel, Ann Hermundstad, Christian Leibold, Timothy O'Leary, Srdjan Ostojic, Cristina Savin, Mark van Rossum, Friedemann Zenke. ____ For any further questions, please contact: bernstein.conference(a)fz-juelich.de ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Juelich GmbH 52425 Juelich Sitz der Gesellschaft: Juelich Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Volker Rieke Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender), Karsten Beneke (stellv. Vorsitzender), Prof. Dr. Astrid Lambrecht, Prof. Dr. Frauke Melchior ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Neugierige sind herzlich willkommen am Sonntag, den 21. August 2022, von 10:00 bis 17:00 Uhr. Mehr unter: https://www.tagderneugier.de

1 0

ISRC Computational Neuroscience, Neurotechnology and Neuro-inspired AI Autumn School
by Wong-Lin, Kongfatt June 6, 2022

June 6, 2022

The Organising Committee from Ulster University's Intelligent Systems Research Centre (ISRC) at Magee Campus in Derry~Londonderry is very pleased to announce that the international Computational Neuroscience, Neurotechnology and Neuro-inspired AI (ISRC-CN3) Autumn School will be held again this year. Supported by the International Brain Research Organisation (IBRO) and other sponsors, this year's Autumn School will run from 24th October to 28th October, inclusively. The topics covered in the ISRC-CN3 Autumn School include: * mathematical foundations in neuroscience * computational modelling of neural-glial systems, neuromodulators and cognition * neural data science * neurotechnology * neuromorphic computing and self-repaired intelligent machines * spiking neural networks and applications * cognitive robotics * ethics in neurotechnology and AI * entrepreneurship in neurotechnology and AI This ISRC-CN3 Autumn School is unique not only in the range and types of topics covered but it will also be delivered in an integrated way, from pedagogical to advanced levels. Registration is made highly affordable, and bursaries may be available. Academic researchers at the ISRC and invited external speakers will contribute to the delivery of this 5-day School, which will consist of lectures and labs. Attendees will have the opportunity to present and share their research work on the final day, and awards will be given to the top presenters. For more information, please visit the websites at: * https://www.ulster.ac.uk/faculties/computing-engineering-and-the-built-envi… * https://www.ulster.ac.uk/faculties/computing-engineering-and-the-built-envi… Application for the Autumn School is now opened and will close on 1st September. For further information, queries, or sponsorship, please contact Dr. KongFatt Wong-Lin (k.wong-lin(a)ulster.ac.uk<mailto:k.wong-lin@ulster.ac.uk>). This email and any attachments are confidential and intended solely for the use of the addressee and may contain information which is covered by legal, professional or other privilege. If you have received this email in error please notify the system manager at postmaster(a)ulster.ac.uk and delete this email immediately. Any views or opinions expressed are solely those of the author and do not necessarily represent those of Ulster University. The University's computer systems may be monitored and communications carried out on them may be recorded to secure the effective operation of the system and for other lawful purposes. Ulster University does not guarantee that this email or any attachments are free from viruses or 100% secure. Unless expressly stated in the body of a separate attachment, the text of email is not intended to form a binding contract. Correspondence to and from the University may be subject to requests for disclosure by 3rd parties under relevant legislation. The Ulster University was founded by Royal Charter in 1984 and is registered with company number RC000726 and VAT registered number GB672390524.The primary contact address for Ulster University in Northern Ireland is Cromore Road, Coleraine, Co. Londonderry BT52 1SA

1 0

WWNeuRise online seminars June-July 2022
by William Podlaski June 5, 2022

June 5, 2022

WorldWideNeuRise will host several online talks throughout June-July 2022 on various topics in systems neuroscience from the following early career researchers (titles TBA): Wednesday, 8 June, 5pm CET Vladyslava Pechuk (Oren Lab, Weizmann Institute) Cathy Chen (Grissom Lab, University of Minnesota) Wednesday, 29 June, 5pm CET Meritxell Sáez (Briscoe Lab, Francis Crick Institute; IQS Barcelona) Esther Klingler (Jabaudon Lab, University of Geneva) Wednesday, 6 July, 5pm CET Ipshita Zutshi (Buzsaki Lab, New York University) Xenia Grande (Duzel Lab, University of Magdeburg) For more information, please visit our website (https://neurise.github.io/) find us on WorldWideNeuro (https://www.world-wide.org/Neuro/WWNeuRise/) or follow us on Twitter (https://twitter.com/WWNeuRise) We are always searching for PhD students and postdocs to give talks in our upcoming seminars on any topic in systems neuroscience. On our website ( https://neurise.github.io/) you can find an application form to directly apply, as well as a recommendation form, where you can suggest individuals from your lab, institute, or otherwise who you think might have an interesting story to tell! We are looking forward to seeing you at our upcoming seminars! The organising committee, Alon Baram (Behrens Lab, University of Oxford) Ellen Boven (Apps Lab, University of Bristol) Christina Buetfering (Häusser Lab, University College London) Wesley Clawson (Levin Lab, Tufts University) Lucie Descamps (Kentros Lab, Norwegian University of Science and Technology) Gily Ginosar (Ulanovsky Lab, Weizmann Institute) Loreen Hertäg (Clopath Lab, Imperial College London) Joram Keijser (Sprekeler Lab, TU Berlin) Bill Podlaski (Machens Lab, Champalimaud Research)

1 0

[JOBS] 1 Post-Doc open Positions on AI-ML to understand and contrast social media threats for teenagers
by Dimitri Ognibene June 4, 2022

June 4, 2022

[JOBS] 1 Post-Doc open Positions on AI-ML to understand and contrast social media threats for teenagers ######### Apologize for cross posting ######### Dear colleagues, University Milano-Bicocca is offering 1 postdoctoral position on machine learning and AI applied to understand and contrast social media threats for teenagers. The successful participant will be involved in the multidisciplinary project COURAGE funded by Volkswagen Foundation. The position is research starting in September 2022 Please contact us for expression of interest and preliminary information: dimitri.ognibene(a)unimib.it (PI) 1 Researcher Position Application Opens: Middle June (tbd) Application Closes: late June (tbd) Interview: 5th July h14 (CET) Starts: September 2022 Duration: 1.5 years (18 months) Salary: €2600 pm Work permit: valid permit to work in Italy from September 2022 is a strong asset Topics: Social media, NLP, machine learning, cognitive models, opinion dynamics, computer vision, reinforcement learning, graph neural network, recommender systems, network analysis Project: COURAGE https://www.upf.edu/web/courage Informal description of the job: Do social media harm teenagers and our society? Can we make them safer? Let's understand how to reshape social media algorithms together with this competitive research positions in #machinelearnig, #artificialintelliegence and #socialmedia modelling based in Università degli Studi di Milano-Bicocca on the project COURAGE #couragecompanion #AIforSocialGood We will use the state of the art in graph neural networks, reinforcement learning, nlp, cv, and machine learning in general to improve our understanding of social media dynamics, and help our society by supporting and teaching young people tackle hate speech and fake news in social media. Many opportunities for interdisciplinary and international research -- Dimitri Ognibene, PhD Associate Professor at Università Milano-Bicocca Honorary Lecturer of Computer science and Artificial Intelligence at University of Essex http://sites.google.com/site/dimitriognibenehomepage/ *Skype:* dimitri.ognibene

1 0

Postdoc position in computational systems neuroscience, Voigts Lab, Janelia
by Jakob Voigts June 1, 2022

June 1, 2022

The Voigts Lab at HHMI Janelia Research Campus is recruiting postdocs. We'll work on how neocortex builds and uses models of the world to give animals complex cognitive abilities. The lab will specifically attempt to go beyond repeated stimulus-response associations, instead using complex, naturalistic spatial behaviors in rodents to study flexible cognition. We'll be able to throw significant technology at the problem of combining sufficient measurements with complex naturalistic behavior, but more importantly we'll have to overcome the challenge of modeling, analyzing, and ultimately learning from data when there are few or no trials to average over. We will use experimental approaches, such as designing new tasks where mice make decisions based on incomplete knowledge of their environment, as well as developing new computational techniques to study circuit mechanisms in the context of unconstrained behaviours. We're part of the new Mechanistic Cognitive Neuroscience research area at Janelia, where there are unique resources for this type of work. We'll work closely with experimental, theoretical, methods, and machine learning researchers in and outside of Janelia to make this research program possible, collaborative, and fun. To apply, please send a cover letter, brief statement of research interests, and CV to voigtsj(a)janelia.hhmi.org Lab website: https://www.voigtslab.org

1 0

The KiloNeurons ERC project: post-doctoral position in theoretical neuroscience
by Yoram Burak June 1, 2022

June 1, 2022

The Burak Lab at the Hebrew University is seeking to hire a postdoctoral research fellow in theoretical neuroscience. The postdoctoral fellow will take part in the ERC funded KiloNeurons project, led by Edvard Moser (Kavli Institute for Theoretical Neuroscience, NTNU) and Yoram Burak (Edmond and Lily Safra Center for Brain Sciences and the Racah Institute of Physics). The project aims to identify how thousands of neurons in the mammalian cortex interact with each other to achieve computational and cognitive functions. The KiloNeurons project offers opportunities to work on diverse theoretical and computational questions. These involve approaches ranging from pure theoretical modelling to analysis and interpretation of large-scale neural data. Theoretical tools include methods from nonlinear dynamics, machine learning, statistical physics, and information theory. A generous budget is available for travel between Israel and Norway to facilitate close interaction with members of the Moser lab, for travel and participation in scientific meetings, and for purchase of computing equipment. We are looking for candidates with excellent demonstrated abilities in theoretical research, strong intellectual curiosity and drive, a keen interest in computational neuroscience, and an interest in relating theory to experimental data. Candidates must have an excellent research record in theoretical neuroscience, theoretical physics, mathematics, computer science, or a related field. Experience with research related to machine learning, statistical physics, nonlinear dynamics, information theory, or large-scale data analysis, as well as prior familiarity with research in computational neuroscience are advantageous. To apply: please send the following information to kiloneurons-positions(a)elsc.huji.ac.il in a single PDF file: 1. Curriculum vitae 2. List of publications 3. Brief statement of research interests 4. The names and contact details of three references Deadline: For full consideration, applications should be received by June 30, 2022. ___ Yoram Burak Associate Professor Racah Institute of Physics, and Edmond and Lily Safra Center for Brain Sciences The Hebrew University of Jerusalem Goodman Brain Sciences Bldg 2102, Safra Campus, Jerusalem 91904, Israel p: +972-2-6584523 web: https://www.buraklab.me/

1 0

CNS*2022 satellite tutorials: free online sessions: June 27--July 1
by Ankur Sinha May 31, 2022

May 31, 2022

Dear all, Apologies for the cross posts. https://ocns.github.io/SoftwareWG/pages/software-wg-satellite-tutorials-at-… The INCF/OCNS Software working group is organising 5 days of free online satellite tutorials ahead of the CNS*2022 conference. These tutorials will run from June 27--July 1 and feature sessions on: - Arbor - Brian2 - Introduction to containers - EBRAINS - GeNN - Keras/TensorFlow - LFPy - MOOSE - Neo + Elephant - NEST - NetPyNE - NeuroLib - NeuroML - NEURON - OSBv2 - RateML More information on the schedule and (free) registration will be published in the next week or so. Please do mark your calendars and spread to word to your colleagues, students, and anyone else who these may interest. For more information on the INCF/OCNS Software working group and how you can join our community, please visit our website: https://ocns.github.io/SoftwareWG/ -- Thanks, Regards, Ankur Sinha (He / Him / His) | https://ankursinha.in Research Fellow at the Silver Lab, University College London | http://silverlab.org/ Free/Open source community volunteer at the NeuroFedora project | https://neuro.fedoraproject.org Time zone: Europe/London

1 0

Job Openings: Professor / Associate Professor / Assistant Professor (Computer Science) (3 vacancies) at Hong Kong Baptist University
by COMP HKBU May 31, 2022

May 31, 2022

The Department of Computer Science at Hong Kong Baptist University offers BSc, MSc, MPhil, and PhD programmes, and is now seeking outstanding applicants for the following faculty positions on tenure-track. *Professor / Associate Professor / Assistant Professor (Computer Science) (3 vacancies) (PR0395/21-22)* The appointees will perform high-impact research, teach and supervise students at undergraduate and postgraduate levels, and contribute to professional and institutional services. Collaboration with other faculty members in research and teaching is also expected. They will be encouraged to collaborate with colleagues within the Department to contribute to two special thematic applications including (a) health informatics and (b) security and privacy-aware computing, and to pursue new strategic research initiatives under the Department/Faculty/University. Applicants should possess a PhD degree in Computer Science, Computer Engineering, Information Systems, or a related field, and sufficiently demonstrate abilities to conduct high quality research in areas including but not limited to: Internet of things, Cyber-security, High-performance computing, Big data analytics, Art technologies and Financial technologies. Applicants should also show strong commitment to undergraduate and postgraduate teaching in computer science and/or information systems, possess track record of innovative research and high-impact publications, and be able to bid for and pursue externally-funded research programmes. Initial appointment will be offered on a fixed-term contract of three years. Re-appointment thereafter will be subject to mutual agreement. For enquiries, please contact Professor Jianliang Xu, Head of Department (email: xujl(a)comp.hkbu.edu.hk) More information about the Department can be found at https://www.comp.hkbu.edu.hk. *Rank and salary will be commensurate with qualifications and experience.* *Application Procedure:* Applicants are invited to submit their applications at the HKBU e-Recruitment System (jobs.hkbu.edu.hk) with samples of publications, preferably three best ones out of their most recent publications/works. They should also request two referees to send in confidential letters of reference, with *PR *number (stated above) quoted on the letters, to the Human Resources Office (Email: recruit(a)hkbu.edu.hk) direct. Those who are not invited for interview 4 months after the closing date may consider their applications unsuccessful. All application materials including publication samples, scholarly/creative works will be disposed of after completion of the recruitment exercise. Details of the University’s Personal Information Collection Statement can be found at http://hro.hkbu.edu.hk/pics. The University reserves the right not to make an appointment for the posts advertised, and the appointment will be made according to the terms and conditions applicable at the time of offer. *Closing date: Shortlisting will start immediately until the position is filled.* *URL: *https://www.comp.hkbu.edu.hk/v1/?page=job_vacancies&id=743

1 0

The Canadian Computational Neuroscience Spotlight is one week away!
by Scott Rich May 30, 2022

May 30, 2022

Dear all, The third edition of the Canadian Computational Neuroscience Spotlight (CCNS) is just one week away. Our speaker list is now finalized, and can be found at ccnsmeeting.ca. The meeting will include keynote addresses from Drs. Viktor Jirsa, Gaute Einevoll, and Cendri Hutcherson, as well as a session on Neuro-AI with talks from Drs. Richard Naud, Milad Lankarany, Blake Richards, and Wilten Nicola. Register for the meeting at https://www.crowdcast.io/e/ccnsv3/register. We will be accepting late submissions for Trainee Talks until Wednesday at noon EDT. Please submit your abstracts at https://forms.gle/Vr1BsUZxjbSn1aFG7 for consideration. Sincerely, Scott Rich (on behalf of the organizing committee)

1 0

Ph.D. and postdoc positions in human visual psychophysics in Zhaoping lab
by Li Zhaoping May 27, 2022

May 27, 2022

Li Zhaoping's labs at Max Planck Institute for Biological Cybernetics and University of Tuebingen have postdoc positions and Ph.D. positions available on human visual psychophysics for highly skilled and motivated individuals. The projects are towards understanding visual attentional and perceptual processes. Our research methods often include eye tracking, EEG, fMRI, TMS, and computational modeling, and hence familiarity in some of these methodologies is highly desirable. The research framework, their motivations, and example project types can be found at http://www.lizhaoping.org/zhaoping/AGZL_HumanVisual.html General information on researches in Zhaoping's lab can be found at http://www.lizhaoping.org/ For more details and to apply, please visit *https://jobs.tue.mpg.de/jobs/169* <https://jobs.tue.mpg.de/jobs/169>* for the postdoc positions* ***https://jobs.tue.mpg.de/jobs/170* <https://jobs.tue.mpg.de/jobs/170>* for the Ph.D positions* The positions are available immediately, applications received by *June 5th, 2022* will be preferentially considered, but later applications will still be considered until the positions are filled. The postdoc positions are for 2 years (and renewable), and the Ph.D. positions are for 3 years. Inquiries welcome. Li Zhaoping li.zhaoping(a)tuebingen.mpg.de * * * *

1 1

PostDoc position at UCL: MEG and big data smartphone analysis
by Hauser, Tobias May 26, 2022

May 26, 2022

PostDoc position at Max Planck UCL Centre for Computational Psychiatry with Dr Tobias Hauser We are looking for a PostDoc to work on exciting projects analysing already collected MEG and smartphone app data. We are looking for someone with experience in data analysis with behavioural and/or electrophysiological (MEG) data. The postdoc will be working on a MEG dataset of a novel task including a big patient sample. In addition, they will have the opportunity to analyse a large dataset of behavioural and questionnaire data from a smartphone app (www.brainexplorer.net<http://www.brainexplorer.net>). We are looking for someone with computational modelling, machine learning, or advanced neuroimaging data analysis expertise. The person will be based at the Max Planck UCL Centre for Computational Psychiatry and Ageing Research and the Wellcome Centre for Human Neuroimaging, located in Central London. If you have further questions, please contact Tobias Hauser (t.hauser(a)ucl.ac.uk<mailto:t.hauser@ucl.ac.uk>). To read more about the research group, please see https://devcompsy.org/ Job advert here: https://atsv7.wcn.co.uk/search_engine/jobs.cgi?amNvZGU9MTg4NDY5NiZ2dF90ZW1w… Best Tobias -- Play smartphone games and help us understand the brain: www.brainexplorer.net<http://www.brainexplorer.net> Dr Tobias U. Hauser Sir Henry Dale Fellow, Principal Research Fellow Developmental Computational Psychiatry lab Max Planck UCL Centre for Computational Psychiatry & Ageing Research Wellcome Centre for Human Neuroimaging University College London 10-12 Russell Square London WC1B 5EH +44 207 679 5264 (internal: 45264) t.hauser(a)ucl.ac.uk<mailto:t.hauser@ucl.ac.uk> www.tobiasuhauser.com<http://www.tobiasuhauser.com/> www.devcompsy.org<http://www.devcompsy.org/>

1 0

PhD position offer: Neuro-inspired macroscale model of tCS-induced changes on epileptic networks
by Elif Köksal May 26, 2022

May 26, 2022

*Title*: Neuro-inspired macroscale model of tCS-induced changes on epileptic networks *Context*. Epilepsy refers to a neurological disorder that affects about 1% of the general population. Recent findings indicate that non-invasive brain transcranial current stimulation (tCS) is safe and of therapeutic promise in epilepsy. However, it is not yet indicated as a standard treatment due to major scientific limitations: unknown mechanisms of action, insufficient account for patient-specific factors, poor understanding of short- and long-term effects. The ambition of the GALVANI Project (ERC-SyG 2019; 2020-26) is to transform the care of a large fraction of patients living with drug-resistant epilepsies by solving a fundamental problem: to efficiently target and control large-scale epileptic brain networks with tCS-induced neuromodulatory weak electric fields. *Rationale. *Electrical stimulation (supra-threshold) and neuromodulation (sub-threshold) are two different methods that can be used to alter brain plasticity in order to lower hyperexcitability and subsequently decrease the occurrence of epileptiform events. These events are generated large-scale brain networks involving interconnected distant brain regions characterized by an increase of excitability. In this context, computational models are an efficient way to understand features of epileptiform events recorded in patients, either intracerebrally or from electrodes located on the scalp. In addition, it is an efficient tool to analyze the impact of tCS on the brain and optimize its therapeutic effect. *Objective. *This research focuses on neuromodulation induced by transcranial current stimulation (tCS). The objective of the proposed PhD position is to design a neuro-inspired macroscale model of the brain that will simulate electroencephalographic (EEG) signals under 2 conditions: spontaneous activity and tCS. The model will be able to simulate the activity of epileptogenic networks generating epileptic spikes during interictal periods. It will account for immediate (acute) and lasting (short- or long-term) effects of neuromodulatory weak electric fields, which remain elusive. Simulations will help the design of tCS-based neuromodulation strategies aimed at lowering interictal epileptic spikes. *Methods. *The model will start from previous results of the team (Merlet et al. PlosOne 2013, Bensaid et al. Frontiers in Neuroscience 2019). It will consist of a macroscale network of interconnected (edges) neural populations (nodes) located in the neocortex. Neurophysiological activity of each node will be generated by a neural mass model. The whole model will allow for simulation of normal and epileptic EEG activity (interictal spikes, ictal activity) under 2 conditions: spontaneous and tCS. Simulated signals will be compared to EEG signals recorded in patients under similar conditions. The model will be embedded into an existing software named COALIA developed in Python. tCS induced E-fields will be simulated using SimNibs (to start with) and with tools developed at Neuroelectrics. Optimal parameters reducing epileptic activity will be determined. *Scientific environment. *GALVANI involves three partners: LTSI-Inserm (Rennes), AMU-APHM (Marseille) and Neuroelectrics (Barcelona). It is intended to develop the next generation of brain stimulation solutions. GALVANI can be viewed as a distributed lab (Rennes-Barcelona-Marseille) working under a common policy to ensure coherence of research and intense collaboration and cross-fertilization. Fellows will be co-supervised in a unique, shared environment with exposure to science, technology and clinical experience. *Candidate profile.* The research project is at the interface between biomathematics (neuro-inspired models), biophysics (electric field models), and neuroscience/neurology (epilepsy). The candidate will preferably have some background in dynamical systems, computational neuroscience/systems biology or in electrical engineering, with experience in bio-signal processing and biophysics. Knowledge in electrophysiology and/or EEG analysis would be an asset. The PhD fellow will join a multidisciplinary team including research scientists in biomedical engineering, neurophysiological modeling, bio-physics, signal processing, electrophysiology, neurology. - *Contract*. The position will start on 01/10/2022. The contract is for 3 years with possible extension (3 months). The salary will be defined according to Inserm rules regarding doctoral student remuneration. Deadline for application. 15/07/2022 Contact. Applicants must send a CV and a cover letter to: Fabrice Wendling (DR Inserm, LTSI, France) Email: fabrice.wendling(a)inserm.fr Isabelle Merlet (CR Inserm, LTSI, France) Email: isabelle.merlet(a)inserm.fr Elif Koksal (Post-doc fellow, LTSI, France) Email: elif.koksal-ersoz(a)inserm.fr Pascal Benquet (Prof. Univ-Rennes1) Email: Pascal.Benquet(a)univ-rennes1.fr

1 0

Postdoc positions in NeuroAI
by Rui Ponte Costa May 26, 2022

May 26, 2022

We are looking for two postdocs to work on deep learning-inspired computational neuroscience at the University of Bristol, United Kingdom. There are a number of exciting topics that you could contribute to: 1. Neuromodulated cortex-wide credit assignment 2. Subcortical facilitation of cortical learning 3. Theories of self-supervised learning in cortical circuits There are also opportunities to collaborate closely with leading cellular, systems and cellular neuroscientists, but also deep learning researchers. Successful candidates should have: - a strong quantitative background - keen interest in neuroscience - obtained (or be close to) a PhD in computational neuroscience, machine learning, physics, mathematics, computer science or similar. - ability to work in a strongly collaborative and interdisciplinary field Please express your interest by sending your cv and a brief statement of research interests to rui.costa(a)bristol.ac.uk<mailto:rui.costa@bristol.ac.uk> More info about our group at: neuralml.github.io<https://neuralml.github.io/> Best wishes, Rui Ponte Costa Lecturer (Assistant Professor) in Computational Neuroscience & Machine Learning Neural and Machine Learning group<https://neuralml.github.io/> Bristol Computational Neuroscience Unit<http://bristolcnu.github.io/>, Intelligent Systems Labs<https://www.bristol.ac.uk/engineering/research/intelligent-systems/> Faculty of Engineering & Bristol Neuroscience, University of Bristol<https://bristol.ac.uk/>, UK

1 0

Postdoctoral opportunity UTSA-AFRL
by Fidel Santamaria May 24, 2022

May 24, 2022

We are looking for a postdoctoral fellow to computationally and theoretically study the effects of thermal gradients in synaptic plasticity. This is an area of research with potential translational and engineering applications. This is also a unique opportunity for those that want to explore working along the lines of interest of the Air Force Research Laboratories (AFRL). Furthermore, the funds and benefits dedicated for the training of the selected candidate are way better than what you can get in a traditional postdoctoral position. This research is part of a collaboration between the University of Texas at San Antonio, an R1 institution, and the AFRL. To apply please follow the link or look it up https://www.zintellect.com/Opportunity/Details/AFRL-711HPW-2022-0005 more information here https://orise.orau.gov/internships-fellowships/postdocs.html Please note that this position is only open to US citizens. You can also contact Dr Santamaria for more information: fidel.santamaria(a)utsa.edu<mailto:fidel.santamaria@utsa.edu> _______________________________________________________________________________ Fidel Santamaria, PhD Professor Department of Neuroscience, Development, and Regenerative Biology University of Texas at San Antonio www.utsa.edu/SantamariaLab<http://www.utsa.edu/SantamariaLab> Office: BSB 1.03.30 Tel +1(210) 458 6910

1 0

International Symposium on AI and Brain Science 2022: Call for poster abstracts and registration
by Kenji Doya May 24, 2022

May 24, 2022

We are pleased to announce the International Symposium on AI and Brain Science 2022 on July 4th and 5th at Okinawa Institute of Science and Technology http://www.brain-ai.jp/symposium2022/ as a satellite event for Neuro2022 at Okinawa Convention Center from June 30th to July 3rd. https://neuro2022.jnss.org/en/ The symposium is on-site/online hybrid and we are calling for on-site poster presentations by June 1st. Please note that all foreign nationals currently need a visa to enter Japan and if you need a visa application support, please submit your abstract by May 25th, i.e. immediately. Attendance is free, but registration is required by June 15th from the web site: http://www.brain-ai.jp/symposium2022/registration/ Tentative Program: time in JST=GMT+9 <Monday July 4th> 9:00 Registration 9:40 Opening: Kenji Doya 10:00-12:00 Session 1: AI for Brain Science Maneesh Sahani, Angela Langdon, Xiao-Jing Wang, Terrence Sejnowski 12:00-14:00 Lunch and Poster Session 14:00-16:00 Session 2: Biological and robotic motor control Tetsuya Ogata, Tom Macpherson, Jun Izawa, Rieko Osu 16:30-18:30 Session 3: Brain-inspired AI Masashi Sugiyama, Matthew Botvinick, Yutaka Matsuo <Tuesday July 5th> 10:00-12:00 Session 4: AI, Brain, and Society Patricia Churchland, Yoshua Bengio, Ryota Kanai, Ai Koizumi 12:00-13:00 Lunch and Poster Session 13:00-15:00 Session 5: Natural and artificial consciousness Hideaki Shimazaki, Keisuke Suzuki, Makiko Yamada, Tadahiro Taniguchi 15:30-17:30 Session 6: Bayesian Brain and Computational Psychiatry Jun Tani, Karl Friston, Yuichi Yamashita, Misako Komatsu 17:30-18:00 General Discussion - Closing Hope to see many of you in Okinawa, or online. Co-organizers: Kenji Doya (Okinawa Institute of Science and Technology) Karl Friston (University College London) Hiroaki Gomi (NTT Communication Science Laboratories) Takao Hensch (The University of Tokyo International Research Center for Neurointelligence) Maneesh Sahani (Gatsby Computational Neuroscience Unit) Masashi Sugiyama (RIKEN Center for Advanced Intelligence Project) Tadahiro Taniguchi (Ritsumeikan University) Naotsugu Tsuchiya (Monash University) ---- Kenji Doya <doya(a)oist.jp<mailto:doya@oist.jp>> Neural Computation Unit, Okinawa Institute of Science and Technology Graduate University 1919-1 Tancha, Onna, Okinawa 904-0495, Japan Phone: +81-98-966-8594; Fax: +81-98-966-2891 https://groups.oist.jp/ncu

1 0

CFP: Frontiers research topic on Neural Dynamics and Behavior in Freely Moving Animals (DL:2022.10.30)
by Panagiotis Symvoulidis May 23, 2022

May 23, 2022

Dear Colleagues, We are organizing the Frontiers Research Topic below, aiming to create a collection of articles across the whole field of neuroscience studies of freely moving animals. Please *consider submitting* your related work and *sharing the call* with potentially interested colleagues. Apologies for the cross-post. *The Brain in Action: Neural Dynamics and Behavior in Freely Moving Animals* *Link*: https://www.frontiersin.org/research-topics/20697/the-brain-in-action-neura… *Details: *Understanding the neural basis of complex behaviors is a primary aim of neuroscience. However, until recently, the field lacked an appropriate set of techniques for simultaneously measuring neural activity and behavior in freely moving animals, forcing investigators to use immobilized animals performing simplistic behavioral tasks. Synergistic technological breakthroughs in fluorescent brain imaging and behavioral tracking approaches have paved the way to a new type of neuroscience that enables tracking behavior in setups compatible with brain imaging and manipulation, even at the single-cell level, using optical electrophysiology techniques. A diversity of such neurobehavioral imaging systems have been recently invented, spanning the range of conventional model organisms including C. Elegans, Flies, Zebrafish, and Rodents. Each species and approach showcases unique technical challenges, achievements, and opportunities. Our aim with this Research Topic is to provide an overview of this new field. We will present not only the technological advances but also discuss the novel type of experiments and insights that they promise. To achieve that, we welcome articles that span the following categories: i) Algorithms and imaging systems for tracking and quantifying complex behaviors of freely moving animals; ii) Molecular tools and microscopes, enabling capturing or manipulating neuronal dynamics. Such systems could include tracking or large field of view microscopes in small animals, head-mounted mini scopes and fiber-based systems for mammalian models, -or non-optical methods; iii) Neuroscience studies, using such tools to generate neurobehavioral datasets (ideally shareable with the community) and new biological findings; iv) Perspective articles on the future possibilities of such systems are also welcome -including ones that discuss alternatives approaches; v) Analysis pipelines and computational neuroscience frameworks exploiting the produced datasets, along with ways to integrate them with existing ( or future) knowledge and techniques. *Keywords*: Brain Imaging, Behavioral Tracking, Quantitative Behavior, Neuronal Dynamics, Freely Moving *Participating Journals:*Frontiers in Neuroscience Frontiers in Neuroimaging *Guest Editors Team:* Prof. Gershow, Prof. Venkatachalam, Dr. Marshall, and Dr. Symvoulidis *Deadline:*30 October 20202 Best, Panos

1 0

New 4-years PostDoc position in "Explainable Machine / Deep Learning in Translational Psychiatry" at Charité - Universitätsmedizin Berlin, Germany
by Kerstin Ritter May 19, 2022

May 19, 2022

Dear all, John-Dylan Haynes and I offer a new PostDoc position in the field of "Explainable Machine Learning / Deep Learning in Clinical Neuroimaging and Translational Psychiatry" at Charité - Universitätsmedizin Berlin, Germany (see advertisement below) - please feel free to forward the advertisement to people who may be interested! Thanks a lot! Best wishes, Kerstin Ritter ______________________________________________________________ Explainable Machine Learning / Deep Learning in Clinical Neuroimaging and Translational Psychiatry PostDoc position (starting date: July/August 2022, up to 4 years; 100 %) at Charité - Universitätsmedizin (Berlin, Germany) At Charité - Universitätsmedizin Berlin and the Bernstein Center for Computational Neuroscience, we are looking for a motivated and highly qualified PostDoc for methods development at the intersection of explainable machine learning / deep learning and clinical neuroimaging / translational psychiatry. The position will be located in the research groups of Ass. Prof. Kerstin Ritter and Prof. John-Dylan Haynes at Charité Berlin. The main task will be to predict response to cognitive-behavioral psychotherapy in retrospective data and a prospective cohort of patients with internalizing disorders including depression and anxiety from a complex, multimodal data set comprising tabular data as well as imaging data (e.g., clinical data, smartphone data, EEG, structural and functional MRI data). An additional task will be to contribute to the organization and maintenance of the prospective cohort. This study will be one of several projects in the newly established Research Unit 5187 "Precision Psychotherapy" (headed by Prof. Ulrike Lüken). Please see also the job advertisement: https://www.charite.de/service/stellenangebot/angebot/detailinfo/dm11822b_r… Requirements for the Postdoc: - Excellent degree in relevant field (e.g. computer science, mathematics, physics, psychology, computational neuroscience or related). - Excellent methodological skills (esp. machine learning, deep learning, explainable AI, medical image analysis) - Excellent programming skills in python - Excellent writing and communication skills (in English) - Strong interest in neuroscientific and psychiatric research Please send your application (motivation+CV+references) in one pdf-file (in English or German) asap to: Ass. Prof. Dr. rer. nat. Kerstin Ritter Charité - Universitätsmedizin Berlin Department of Psychiatry and Psychotherapy Bernstein Center for Computational Neuroscience Sauerbruchweg 4, Charitéplatz 1, 10117 Berlin E-Mail: kerstin.ritter(a)charite.de Webpage: https://psychiatrie-psychotherapie.charite.de/en/research/translation_and_n… ______________________________________________________________

1 0

Junior Chair position in Computational Neuroscience, Marseille, France
by Sylvain Takerkart May 19, 2022

May 19, 2022

Aix-Marseille Université (AMU) is opening a Junior Chair in Computational Neuroscience, a new tenured-track path at French Universities. The position is open at Junior Professor level (level of experience 3-10 years after PhD) and is supported with a start-up package of 470K€, including the salary for the Junior Professor. After 3-5 years, depending upon the scientific achievements, the Chair should lead to a permanent Faculty position at the Professor level (PR2). * Starting date: Sept-Dec 2022 (not flexible) * teaching is about 60h/year (negotiable) in Computational neurosciences * deadline of application June 8th * Inquiries and further information can be sent directly to both Dr Guillaume Masson (Director INT:guillaume.masson@univ-amu.fr <mailto:guillaume.masson@univ-amu.fr>) and Dr Viktor Jirsa (Director INS:viktor.jirsa@univ-amu.fr <mailto:viktor.jirsa@univ-amu.fr>) More info (in French, then in English) at https://www.galaxie.enseignementsup-recherche.gouv.fr/ensup/ListesPostesPub… <https://www.galaxie.enseignementsup-recherche.gouv.fr/ensup/ListesPostesPub…> Please circulate! -- Sylvain Takerkart Institut des Neurosciences de la Timone (INT) UMR 7289 CNRS-AMU Marseille, France tél: +33 (0)4 91 324 007 http://www.int.univ-amu.fr/_TAKERKART-Sylvain_?lang=en

1 0

Call for papers for the 5th international workshop on machine learning in clinical neuroimaging
by MLCN Workshop May 18, 2022

May 18, 2022

Dear Colleagues, Please find below the call for papers for the International Workshop of Machine Learning in Clinical Neuroimaging (MLCN) which is held on *the 18th of September 2022 at MICCAI 2022, Singapore*. We welcome contributions to novel machine learning methods and their applications to clinical neuroimaging data. The submission deadline is *25 June 2022*, and all MLCN accepted papers will be eligible for the best paper award of 500 USD. Top accepted papers will be invited to submit an extended version to the MELBA journal. For more information, please visit https://mlcnws.com/call-for-papers/*.* Best wishes, The MLCN 2022 steering and organizing committees Christos Davatzikos, Andre Marquand, Jonas Richiardi, Emma Robinson Ahmed Abdulkadir, Nicha C. Dvornek, Mohamad Habes, Seyed Mostafa Kia, Vinod Kumar, Thomas Wolfers *Call for Papers* The International Workshop of Machine Learning in Clinical Neuroimaging (MLCN 2022 <https://mlcnws.com/>), a satellite event of MICCAI (MICCAI 2022 <https://conferences.miccai.org/2022/en/>), calls for original papers in the field of clinical neuroimaging data analysis with machine learning. The two tracks of the workshop include methodological innovations as well as clinical applications. This highly interdisciplinary topic provides an excellent platform to connect researchers of varying disciplines and to collectively advance the field in multiple directions. In the *machine learning* track, we seek novel contributions that address current methodological gaps in analyzing high-dimensional, longitudinal, and heterogeneous clinical neuroscientific data using stable, scalable, and interpretable machine learning models. Topics of interest include but are not limited to: · Big data · Spatio-temporal brain data analysis · Structural data analysis · Graph theory and complex network analysis · Longitudinal data analysis · Model stability and interpretability · Model scalability in large neuroimaging datasets · Multi-source data integration and multi-view learning · Multi-site data analysis, from preprocessing to modeling · Domain adaptation, data harmonization, and transfer learning in neuroimaging · Unsupervised methods for stratifying brain disorders · Deep learning in clinical neuroimaging · Model uncertainty in clinical predictions · … In the *clinical neuroimaging *track*,* the applications of existing machine learning algorithms are evaluated to move towards precision medicine for complex brain disorders. The discovery of biological markers in medicine is an important challenge across different fields and various experimental procedures and designs are used to detect biological signatures that can be utilized for improvement in diagnostic, treatment, or for other beneficial ends. However, for most complex brain disorders, we do not have reliable biomarkers today. The application of advanced machine learning methods may help to reach this goal. Therefore, we invite the community to submit conference contributions on machine learning approaches with the goal to improve our understanding of complex brain disorders, moving the field closer to precision medicine. Topics of interest include but are not limited to: · Biomarker discovery · Refinement of nosology and diagnostics · Biological validation of clinical syndromes · Treatment outcome prediction · Course prediction · Analysis of wearable sensors · Neurogenetics and brain imaging genetics · Mechanistic modeling · Brain aging · The presentation of clinical neuroimaging databases to stimulate developments in machine learning · … ------------------------------ *Submission Process:* The workshop seeks high-quality, original, and unpublished work that addresses one or more challenges described above. Papers should be submitted electronically in Springer Lecture Notes in Computer Science (LCNS) style (see this link <https://conferences.miccai.org/2022/en/PAPER-SUBMISSION-AND-REBUTTAL-GUIDEL…> for detailed author guidelines) using the CMT system here <https://cmt3.research.microsoft.com/MLCN2022>. The page limit is 8-pages (text, figures, and tables) plus up to 2-pages of references. We review the submissions in a double-blind process. Please make sure that your submission is anonymous. Accepted papers will be published in a joint proceeding with the MICCAI 2022 conference. ------------------------------ *MLCN Special Issue at the MELBA journal:* We will invite the top accepted papers to submit an extended version of their contribution to the MLCN special issue at the Journal of Machine Learning for Biomedical Imaging (MELBA) <https://www.melba-journal.org/>. The invited papers will go through an independent review process by the journal. *Error! Filename not specified.* <https://www.melba-journal.org/> ------------------------------ *Donders Best Paper Award:* The MLCN’s best paper award is sponsored by Donders Institute <https://www.ru.nl/donders/>. All MLCN accepted papers will be eligible for the best paper award. The recipient of the award will be chosen by the MLCN scientific committee based on the scientific quality, novelty, and clarity of contributions. The winner will be announced at the end of the workshop and will receive a 500 USD honorarium. ------------------------------ *Important Dates:* · Paper submission deadline: June 25, 2022 · Notification of Acceptance: July 23, 2022 · Camera-ready Submission: Aug 6, 2022 · Workshop Date: September 18, 2022

1 0

Final reminder: 9th Baltic-Nordic Summer School on Neuroinformatics (BNNI 2022)
by Daniel Wójcik May 18, 2022

May 18, 2022

*Deadline this Sunday.* Apologies for cross-posting. Please distribute.* ------------------------------------------------------- 9th Baltic-Nordic Summer School on Neuroinformatics (BNNI 2022)* /Understanding neurons, cognition and behavior// //through neuroinformatics and artificial intelligence/ *Place* The Campus of the 600th Anniversary of the Jagiellonian University Revival Faculty of Management and Social Communication / Faculty of Mathematics and Computer Science Krakow, Poland *Time:* July 4-8, 2022 *More information and applications at* http://bionn.matinf.uj.edu.pl/events/bnni2022/ * **Important dates* *22 May 2022 Application deadline* 31 May 2022 Acceptance notification 4-8 July 2022 Summer School *We invite advanced master students, doctoral students, and postdoctoral researchers to participate in the BNNI 2022 to be held at Jagiellonian University in Kraków.* The course is interdisciplinary and covers modeling at different levels of organization of the brain as well as elements of machine learning. The course combines lectures, tutorials and computer exercises for computational modeling and analysis of brain functions at multiple physiological and anatomical scales. The summer school will follow the series of the Baltic-Nordic Courses on Neuroinformatics (BNNI 2013 in Kaunas, BNNI 2014 in Tampere, BNNI 2015 in Tartu, BNNI 2016 in Warsaw, BNNI 2017 in Kaunas, BNNI 2018 in Ventspils, BNNI 2019 <https://bnni.lsmuni.lt/bnni2019/en> in Frankfurt, BNNI 2021 <https://www.humanbrainproject.eu/en/education/BNNI2021/> online). The *target audience* of the course will be advanced master students, doctoral students and postdoctoral researchers in natural science, including physics, chemistry, mathematics, computer science, informatics and information technology, and similar who would like to get an introduction to neuroinformatics and computational neuroscience. Advanced master students, doctoral students and postdoctoral researchers in neuroscience and psychology with strong interest in computer science, data analysis and mathematics, and some educational and/or research background in quantitative science are also encouraged to apply. *The school will be in hybrid format with up to 40 in-person places.* *Faculty includes* Hermann Cuntz, Ernst Strüngmann Institute (ESI) for Neuroscience, Frankfurt, Germany Gaute Einevoll, Norwegian University of Life Sciences and University of Oslo, Norway Boris Gutkin, Ecole Normale Superieure, Paris, France Adam Hamed, Nencki Institute of Experimental Biology, Warsaw, Poland Gabriela Izowit, Jagiellonian University, Kraków, Poland Dieter Jaeger, Emory University Peter Jedlicka, Faculty of Medicine, Justus-Liebig-University and NeuroScience Center, Goethe-University, Germany Ewelina Knapska, Nencki Institute of Experimental Biology, Warsaw, Poland Jan Fousek, Aix-Marseille University, France Marja-Leena Linne, Tampere University of Technology, Finland Jan Rodriguez Parkitna, Maj Institute of Pharmacology, Kraków, Poland Igor Podolak, Jagiellonian University, Kraków, Poland Arnd Roth, University College London, UK Ausra Saudargiene, Lithuanian University of Health Sciences, Kaunas, Lithuania Dirk Schubert, Radboud University, Netherlands Wolfram Schultz, University of Cambridge, UK Eleni Vasilaki, University of Sheffield, Sheffield, United Kingdom Daniel Wójcik, Nencki Institute of Experimental Biology, Warsaw & Jagiellonian University, Kraków, Poland Mirosław Wyczesany, Jagiellonian University, Kraków, Poland Friedemann Zenke, Friedrich Miescher Institute for Biomedical Research (FMI), Basel, Switzerland *Venue* The lectures will be held at the Faculty of Management and Social Communication and the computer classes in the Faculty of Mathematics and Computer Science at the new The Campus of the 600th Anniversary of the Jagiellonian University Revival. The two buildings are next to each other and connected to Kraków center by multiple tram and bus lines. *Registration fee* In person attendance: 100 EUR; covers lunches, coffee breaks and special dinner during the school. Online attendance: 10 EUR; covers transmission costs. The organizers will provide teaching, meals and coffee during the course. The participants are expected to cover their travel and health insurance expenses as well as lodging. We will provide advise with inexpensive lodging for all the students. *Available support* We will award scholarships to 20 in-person participants from outside of Poland. The scholarship (over 4000 PLN before tax) comes with a fee waiver and should be enough to cover travel and lodging during the school. *Funding *The course is supported by the SPINAKER program financed by the National Agency for Academic Exchange (NAWA) in Poland.* * We are looking forward to welcome you at the BNNI 2022 in Kraków in July!

1 0

Date change: Susan Goldin-Meadow speaking on June 1 in Developing Minds global online lecture series
by Jochen Triesch May 17, 2022

May 17, 2022

Dear colleagues, On June 1, the Developing Minds global online lecture series will feature Susan Goldin-Meadow, Dept. of Psychology, U. of Chicago, USA. : "The Mind Hidden in Our Hands“ https://sites.google.com/view/developing-minds-series/home The talk had to be postponed from the originally planned date of May 18. The live event will take place via zoom at: 08:00 CDT (Central Daylight Time) 13:00 UTC (Universal Coordinated Time) 15:00 CEST (Central European Summer Time) 22:00 JST (Japan Standard Time) To participate please register here: https://sites.google.com/view/developing-minds-series/home Abstract Gesture is versatile in form and function. Under certain circumstances, gesture can substitute for speech, and when it does, it embodies the properties of language that children themselves bring to language learning, and underscores the resilience of language itself. Under other circumstances, gesture can form a fully integrated system with speech. When it does, it both predicts and promotes learning, and underscores the resilience of gesture in thinking. Together, these lines of research show how much of our minds is hidden in our hands. Bio Susan Goldin-Meadow is the Beardsley Ruml Distinguished Service Professor in the Departments of Psychology and Comparative Human Development at the University of Chicago. Her research focuses on the most basic building blocks of language and thought as they are developed in early childhood. Specifically, she is interested in uncovering linguistic components that are so basic they will arise in a child’s communication system even if the child has limited access to outside linguistic input. Professor Goldin-Meadow’s research has also generated more broadly applicable insights into how the spontaneous gestures that learners produce can reveal their readiness to learn language, math, and scientific concepts. Professor Goldin-Meadow is the founding Editor of Language Learning and Development, and has been president of the International Society for Gesture Studies, president of the Cognitive Development Society, chair of the Cognitive Science Society, and president of the Association for Psychological Society. She is the recipient of a Guggenheim Fellowship, received the William James award for lifetime achievement in basic research from APS, was elected to the American Academy for Arts and Science in 2005, and the National Academy of Sciences in 2020. Web: https://psychology.uchicago.edu/directory/susan-goldin-meadow The talk will also be recored and the recording made available via the web page: https://sites.google.com/view/developing-minds-series/home Stay healthy, Jochen Triesch -- Prof. Dr. Jochen Triesch Johanna Quandt Chair for Theoretical Life Sciences Frankfurt Institute for Advanced Studies and Goethe University Frankfurt http://fias.uni-frankfurt.de/~triesch/ Tel: +49 (0)69 798-47531 Fax: +49 (0)69 798-47611

1 0

Submissions for trainee talks at CCNSv3 (June 6-7 on Crowdcast) are open
by Scott Rich May 17, 2022

May 17, 2022

The third edition of the CCNS meeting is less than three weeks away! The program is being updated daily at ccnsmeeting.ca. Three of our keynote speakers are confirmed: Drs. Gaute Einevoll, Viktor Jirsa, and Cendri Hutcherson. Other confirmed speakers include Drs. Willy Wong, Steven Prescott, Carmen Canavier, Kelly Shen, and Casper Hesp. To register for the meeting, head over to https://www.crowdcast.io/e/ccnsv3/register. We are also still accepting submissions for Trainee Talks at https://docs.google.com/forms/d/e/1FAIpQLSdF1cFvCOKFuwYJf_e1QpLZaxnANE-xjuG…. Submissions received before May 23 will receive full consideration. We look forward to seeing you at CCNSv3! Sincerely, Scott Rich (on behalf of the organizing committee)

1 0

New publication from the INCF Infrastructure Committee
by INCF May 16, 2022

May 16, 2022

The INCF Infrastructure Committee’s “Recommendations for repositories and science gateways from a neuroscience perspective” <https://www.nature.com/articles/s41597-022-01334-1> has been published today, May 16, as a Comment in Scientific Data <https://www.nature.com/sdata/>. The project, initiated by the INCF Infrastructure Committee, aimed to develop an inclusive set of criteria that could apply to a wide and diverse range of digital services, including repositories, science gateways, data, and software. “We set out to develop criteria that were specific to neuroscience, but we realized during the process that our end result would be applicable to other data-heavy disciplines as well”, says Malin Sandström, coordinator for the Infrastructure Committee. “When you look at the problem closely, it turns out that many of the criteria have to do with best practices for how a service is run and governed, rather than with which types of data and other content it contains”. The work began in October 2020. A draft version <https://www.incf.org/criteria-checklist> was presented to the community at the INCF Assembly in April 2021, in a workshop <https://f1000research.com/documents/10-1026> with representatives from organizations engaged in similar projects, including FAIRSharing, FORCE11, and the Coalition of Open Access Repositories (COAR). A public first version of the criteria checklist was made available on the INCF portal <https://www.incf.org/criteria-checklist> in late 2021. With these criteria, INCF wants to help neuroscience researchers and students choose good services for their specific use cases and help service providers make good and future-proof decisions for setup and operations. Former Chair Wojtek Goscinski, now Chief Executive Officer at the Australian National Imaging Facility, explains: “Data repositories and scientific gateways are critical, but often underappreciated, components in the scientific workflow. It’s important that researchers can navigate the digital landscape to find the services that they need and to understand which services are fit-for-purpose. Likewise, repositories and gateways have increasing obligations to their users”. The recommendations published in the Comment are intended to guide users through the reasoning and considerations that went into the criteria development process. Read more: Workshop report <https://f1000research.com/documents/10-1026> Public first version criteria <https://www.incf.org/criteria-checklist> Blog post <https://incf.org/blog/incf-infrastructure-committee-recommendations-publish…>

1 0

Postdoc positions in modeling/analysis for understanding sleep
by Geoffrey Goodhill May 15, 2022

May 15, 2022

POSTDOC POSITIONS IN MODELING/ANALYSIS FOR UNDERSTANDING SLEEP OVERVIEW. A new NIH-funded collaboration between David Prober (Caltech), Thai Truong (USC) and Geoff Goodhill (Washington University in St Louis) aims to gain new insight into the neural circuits underlying sleep, through a combination of whole-brain neural recordings in zebrafish and theoretical/computational modeling. The Goodhill lab is now looking for 2 postdocs for the modeling and computational analysis components. PROJECT DETAILS. Using novel 2-photon imaging technologies Prober and Truong will record from the entire larval zebrafish brain at single-neuron resolution continuously for long periods of time, examining neural circuit activity during normal day-night cycles and in response to genetic and pharmacological perturbations. The Goodhill lab will analyze the resulting huge datasets using a variety of sophisticated computational approaches, and use these results to build new theoretical models that reveal how neural circuits interact to govern sleep. Theoretical and experimental work will be intimitely linked. APPLICANT PROFILE. Applicants for the positions in the Goodhill lab should have a strong background in mathematics/theory/computation applied to biological problems. Experience in modeling sleep processes is desirable but not required. LAB ENVIRONMENT. The Goodhill lab is an interdisciplinary environment of students and postdocs from a diverse array of backgrounds including neuroscience, mathematics, physics and engineering, working together on understanding neural circuit computation, particularly relating to neural development. The lab both performs its own behavioral and neural imaging experiments with larval zebrafish, and collaborates on the analysis of data generated elsewhere. UNIVERSITY ENVIRONMENT. Washington University in St Louis is ranked in the top 10 institutions globally for Neuroscience and Behavior, and offers an outstanding intellectual environment for research in neuroscience. In 2023 the Goodhill lab will move along with over 100 other labs into Washington University's new start-of-the-art 600,000 sq ft Neuroscience Research Building (https://neuroscience.wustl.edu/research/neuroscience-building) For more information about St Louis see https://explorestlouis.com. To apply please send a detailed CV and cover letter explaining your interest in the positions to g.goodhill(a)wustl.edu. Review of applications will continue until the positions are filled. Professor Geoffrey J Goodhill Departments of Developmental Biology, Neuroscience, Biomedical Engineering, and Electrical and Systems Engineering Washington University in St Louis St Louis, MO 63110 https://neuroscience.wustl.edu/people/geoffrey-goodhill-phd Email: g.goodhill(a)wustl.edu

1 0

Postdoc / Junior Scientist in Multimodal Neuroimaging Machine Learning, Prague, Czech Republic
by Magda Pokorna May 12, 2022

May 12, 2022

Postdoctoral / Junior Scientistposition in Multimodal Neuroimaging Machine Learning is available in Prague, Czech Republic: A postdoc or junior scientistposition is available to join the _Complex Networks and Brain Dynamics group <http://cobra.cs.cas.cz/>_for the project: /“Predicting functional outcome in schizophrenia from multimodal neuroimaging and clinical data“/funded by the Czech Health Research Council.The project involves the development of tools to predict the functional outcome of schizophrenia from multimodal neuroimaging, clinical and cognitive measurements taken early after disease onset. To overcome limitations due to high dimensionality of data, we combine robust machine-learning tools, data-driven feature selection and theory-based brain network priors.The project is carried out in collaboration with the National Institute of Mental Health, using its unique large rich imaging, cognitive and biochemical data of early stage schizophrenia patients. **Applications will be reviewed on a rolling basis with a first cut-off point on June 30, 2022.** For more information and application see https://www.cs.cas.cz/job-offer/postdoctoral-junior-scientist-position-Hlin… Do not hesitate to contact the principal investigator for informal inquiries concerning the position: Ing. Mgr. Jaroslav Hlinka, Ph.D., hlinka(a)cs.cas.cz, Web: http://cs.cas.cz/hlinka. Institute of Computer Science Czech Academy of Sciences Pod Vodarenskou vezi 2 Prague 8, 182 07, Czech Republic https://www.cs.cas.cz/

1 1

INCF Assembly 2022: Abstract deadline extended!
by INCF May 11, 2022

May 11, 2022

*The deadline to submit your abstracts to INCF Neuroinformatics Assembly 2022 <https://neuroinformatics.incf.org/> has been extended to May 23!* This interactive event will take place virtually from September 12-16 on the Gather platform, with poster sessions in Zohuddle. We’ve chosen these platforms specifically to make your experience as close to an in-person experience as possible. *Why is Assembly’s format different from other virtual conferences?* The Gather platform enables you to “walk” around the virtual space and when you get close to other participants they will pop up on live video. This works the same for posters and exhibitor booths and gives you a much more interactive experience than your ordinary virtual conference! The Assembly offers many training opportunities for participants of all career stages - this year we offer a 2 PhD-credit course on “Neuroscience data integration through use of digital brain atlases”. See all training sessions here <https://neuroinformatics.incf.org/2022/educational-courses>. *What is Zohuddle?* It’s an app to simplify virtual networking, specifically the poster session of Assembly. It works by letting you rank the abstracts that interest you the most, then creating a schedule of “huddles” with an integrated video chat for you to meet your matches! Important dates: - Registration opens: April 8 - Abstract submission opens: April 8 - Abstract submission closes: May 23 - Assembly: September 12-16 Submit your abstract & register for Assembly 2022 today! <https://neuroinformatics.incf.org/> *Share with your friends, colleagues, and networks!* Please forward the above email to your colleagues, students, and other networks to make this the best Assembly yet! Is social media more your style? Here are some posts just for you! Post 1: 📢Deadline extended!📢 You now have until May 23 to submit your abstracts for INCF Neuroinformatics Assembly 2022! Learn more & register here: bit.ly/Assembly2022reg Post 2: How is INCF Neuroinformatics Assembly 2022 more interactive than other virtual conferences? - “Walk” around the space - get close to other participants to interact via video! - Earn 2 PhD credits on one of our digital brain atlasing courses! Learn more: bit.ly/NeuroinformaticsAssembly2021 *We hope to see you at INCF Neuroinformatics Assembly 2022!*

1 0