- Comp-neuro - lists.cnsorg.org

[job] Postdoctoral Researcher on fMRI study of spontaneous thoughts and natural task
by Mingbo Cai 02 Mar '21

02 Mar '21

Postdoctoral Researcher on fMRI study of spontaneous thoughts and natural tasks We seek a talented neuroscientist with extensive experience in the areas of advanced fMRI analysis, (such as encoding or decoding models) and the design of experiments using naturalistic tasks and assessing spontaneous thoughts. A 3-year postdoctoral position is available at Dr. Mingbo Cai’s lab at the International Research Center for Neurointelligence, The University of Tokyo. You will work on an exciting international collaboration project co-funded by AMED of Japan and DFG of Germany directed by both Dr. Cai <https://cailab-ircn.org/> and Dr. Nicolas Schuck <https://schucklab.gitlab.io/> at Max Planck Institute for Human Development. You will also have the opportunity to collaborate remotely with Dr. Quentin Huys <https://quentinhuys.com/> at the University College London. The project will focus on understanding the contents and dynamics of spontaneous thoughts using fMRI decoding and natural tasks. In the later stage of the project, we also plan to examine the clinical implication of differences in spontaneous thoughts. Applicants with experience working on populations with mental disorders are also highly encouraged to apply. The working language is English. The working location is at The University of Tokyo, Japan. Contract duration: renewed annually up for 3 years, with a probation period of 6 months. Starting date: On or after April 1, 2021. *Requirements* (1) Applicants must hold, or be expected to hold by the time of appointment, a PhD, M.D. or equivalent degree in Neuroscience, Psychology, Psychiatry, Machine Learning, Statistics or related fields. (2) Experience in conducting fMRI experiments and data analysis (evidenced by publications, conference presentations or writing samples). (3) Familiar with at least one of the following tools: AFNI, FSL, nilearn, BrainIAK. (4) Good speaking and scientific writing skills in English. (5) Good programming skills. (6) Willing to collaborate and help colleagues. Requirements 2 and 3 may be replaced by two or three of the preferred skills below: *Preferred skills:* (1) Research experience with fMRI experiments involving natural tasks and multivariate pattern analysis. (2) Experience with experiments investigating spontaneous thoughts. (3) Research experience with investigations of psychiatric disorders. (4) Knowledge of and experience with deep learning. *Application procedure:* Please send an email with title “[Postdoc Application] + your name” to mingbo.cai(a)ircn.jp. Please include a cover letter describing your background and research interest, a curriculum vitae, and contact information for 2-3 recommendation letters (ideally you can also request your referees to send their letters directly to the above email address). To increase the chance of being considered, we suggest you include writing samples or a copy of a poster. Informal inquiry can also be sent to Dr. Cai. *Application deadline:* The first deadline is March 31. The position will remain open until filled. We encourage early application as the review can start before the deadline. Mingbo Cai Principal Investigator International Research Center for Neurointelligence The University of Tokyo https://cailab-ircn.org/ Mingbo Cai

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WorldWideNeuRise online seminar series on inter-areal communication
by William Podlaski 01 Mar '21

01 Mar '21

WorldWideNeuRise is an online seminar series affiliated with WorldWideNeuro and eLife which aims to give early career researchers a chance to share their work. We will have several talks throughout March-April on the topic of inter-areal communication from the following speakers: Wednesday, 3 March, 5pm CET Arseny Finkelstein (Svododa lab, Janelia HHMI) Wednesday, 10 March, 5pm CET Aleena Garner (Keller lab, Friedrich Miescher Institute) Kelly Clancy (Mrsic-Flogel lab, University College London) Wednesday, 24 March, 5pm CET Matthew Perich (Rajan lab, Mount Sinai) Evren Gokcen (Yu lab, Carnegie Mellon University) Wednesday, 7 April, 5pm CET Monique Smith (Malenka lab, Stanford University) Adi Kol (Goshen lab, Hebrew University of Jerusalem) Wednesday, 21 April, 5pm CET David Tingley (Buzsáki lab, New York University) Javad Karimi Abadchi (Mohajerani & McNaughton labs, University of Lethbridge) For more information, please visit our website (https://neurise.github.io/) find us on WorldWideNeuro (https://www.world-wide.org/Neuro/WWNeuRise/) or follow us on Twitter (https://twitter.com/WWNeuRise) We are looking forward to seeing you there! The organising committee, Ellen Boven (Apps lab, U Bristol) Christina Buetfering (Häusser lab, U College London) Lucie Descamps (Kentros lab, NTNU) Gily Ginosar (Ulanovsky lab, Weizmann Institute) Loreen Hertäg (Sprekeler lab, TU Berlin) Joram Keijser (Sprekeler lab, TU Berlin) Bill Podlaski (Machens lab, Champalimaud)

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Registration open for the second Canadian Computational Neuroscience Spotlight (CCNSv2)
by Scott Rich 01 Mar '21

01 Mar '21

Dear Comp-Neuro Mailing List, Last year, the Canadian Computational Neuroscience Spotlight <https://www.crowdcast.io/e/CCNS/register> (CCNS) was one of the first neuroscience conferences to successfully transition into the virtual space <https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1008…> due to the COVID-19 pandemic, with more than 450 registrants from across the globe. Given the overwhelmingly positive feedback we received from this first meeting, we are excited to announce a “v2” of the conference will take place this coming May 17-18, and registration is now open <https://www.crowdcast.io/e/ccnsv2/register>. We are hoping that you will not only register for the meeting, but advertise it via email listservs, social media, and any other avenues you deem appropriate. CCNSv2 will feature four sessions chaired by internationally recognized computational neuroscientists on topics that bridge the multiple scales at which neuroscience research, both computationally and experimentally, is performed. Three of our four chairs are currently confirmed: *Dr. Etay Hay* of the Krembil Centre for Neuroinformatics, *Dr. Maurizio de Pitta *of the Basque Center for Applied Mathematics, and *Dr. Bratislav Misic* of McGill University. As CCNS was designed as a “trainee focused” meeting, each session will begin with a tutorial talk in which a topic of importance will be introduced for a broad audience. We also will host two panel discussions, one with experienced computational neuroscience researchers and the other with ECRs and current trainees, to provide a forum for trainees to ask questions of scientists at various stages of their careers. We invite all trainees to submit an abstract <https://docs.google.com/forms/d/e/1FAIpQLSdCRPkDuPdoS3M7PISDITXfB__rWDiFEi9…> to give a “trainee talk” at the meeting. We anticipate accepting all applications that reasonably fall under the broad banner of computational neuroscience unless the demand far exceeds our expectations. We will also provide an additional spotlight to four talks that are both the most meritorious and best fit with the focused themes of the meeting. Please do not hesitate to contact us if you have any further questions regarding this meeting or manners of advertising it. We look forward to seeing you at CCNSv2! Sincerely, The CCNS Organizing Committee Scott Rich <http://scottrich.strikingly.com/>, Ph.D.: Postdoctoral Research Fellow, Krembil Research Institute Andreea Diaconescu <https://cognemo.com/>, Ph.D.: Independent Scientist, Krembil Center for Neuroinformatics at CAMH John Griffiths <https://t.co/AlUQymEUae?amp=1>, Ph.D.: Independent Scientist, Krembil Center for Neuroinformatics at CAMH Milad Lankarany <https://sites.google.com/view/lnsbsp/home>, Ph.D.: Scientist, Krembil Research Institute

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Computational Brain Reimagined
by Aurel A. Lazar 01 Mar '21

01 Mar '21

In recent years, the growing wealth of Drosophila neuroscience data have become available including cell type and connectome/synaptome datasets for both the larva and adult fly. To facilitate integration across data modalities and to accelerate the understanding of the functional logic of the fruit fly brain, we have developed FlyBrainLab, a unique open-source computing platform that integrates 3D exploration and visualization of diverse datasets with interactive exploration of the functional logic of modeled executable brain circuits. For a brief description, see the eLIFE paper: "Accelerating with FlyBrainLab the Discovery of the Functional Logic of the Drosophila Brain in the Connectomic Era”, February 2021, https://elifesciences.org/articles/62362 Further details are available on the Fruit Fly Brain Observatory website at https://www.fruitflybrain.org/#/ <https://www.fruitflybrain.org/#/> Here you will find guides to a wealth of fruit fly brain datasets and libraries to interactively explore circuit models. Check out "Exploring the Fruit Fly Brain Observatory” at https://www.fruitflybrain.org/#/posts/explore_ffbo <https://www.fruitflybrain.org/#/posts/explore_ffbo> and the links to open source code posted on Github: https://www.fruitflybrain.org/#/posts/resources <https://www.fruitflybrain.org/#/posts/resources> Best, Aurel http://www.bionet.ee.columbia.edu

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Modellers Workshop for the Brain Dynamics Toolbox
by Stewart Heitmann 01 Mar '21

01 Mar '21

Modeller’s Workshop for the Brain Dynamics Toolbox Online Course. Enrolments open 1-20 March 2021. This is a practical self-paced course for researchers and students who wish to program their own dynamical models using the Brain Dynamics Toolbox (bdtoolbox.org<https://bdtoolbox.org/>). Participants learn the art of programming differential equations and how to use the toolbox to solve those equations interactively. Topics include programming Ordinary Differential Equations, Partial Differential Equations, Delay Differential Equations, Stochastic Differential Equations, Auxiliary Plot Functions and command-line tools. Example code is provided in all cases. Course Website https://bdtoolbox.org/p/modellers-workshop/ Important Dates Early-bird enrolments ($125) close Sunday 6th March, 2021. Late enrolments ($150) close Saturday 20th March, 2021. Stewart Heitmann Disclaimer The information contained in this communication from the sender is confidential. It is intended solely for use by the recipient and others authorized to receive it. If you are not the recipient, you are hereby notified that any disclosure, copying, distribution or taking action in relation of the contents of this information is strictly prohibited and may be unlawful. This email has been scanned for viruses and malware, and may have been automatically archived by Mimecast Ltd, an innovator in Software as a Service (SaaS) for business. Providing a safer and more useful place for your human generated data. Specializing in; Security, archiving and compliance. To find out more visit the Mimecast website.

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[CFP] Submission deadline extended to Mar 5: ICLR Workshop on How Can Findings About The Brain Improve AI Systems?
by Mariya Toneva 28 Feb '21

28 Feb '21

ICLR 2021 - Workshop on "How Can Findings About The Brain Improve AI Systems?" Submission deadline: extended to March 5, 2021 Workshop website: https://iclrbrain2ai.github.io/ Contact: brain2ai.2021(a)gmail.com We will consider the following (non-exhaustive) list of topics for contribution: - Integration of neuroscientific data at different granularities (neural recordings, neuroimaging etc.) to train AI systems - Brain-inspired inductive biases and ML architectures for AI systems - Neuroscientific data as an evaluation metric for AI systems - Mechanistic insight into cognitive functions (vision, language, decision making, attention, etc.) - Limitations of current AI systems in tasks at which humans excel (compositionality, commonsense reasoning, continual learning, few-shot learning, causality, etc.) - Cross-modality and cross-species comparisons of neuroscientific data with respect to benefits to AI - Datasets that can facilitate the transfer of neuroscientific insight to AI Submit at: https://cmt3.research.microsoft.com/BRAIN2AI2021/Submission/Index The workshop will feature a diverse set of topics led by the following invited speakers and panelists (in alphabetical order): 1. Anima Anandkumar, California Institute of Technology 2. David Cox, Harvard University 3. Kenji Doya, Okinawa Institute of Science and Technology Graduate University 4. Allyson Ettinger, University of Chicago 5. Alona Fyshe, University of Alberta 6. Jack Gallant, University of California, Berkeley 7. Andrea Martin, Max Planck Institute for Psycholinguistics 8. Kim Stachenfeld, DeepMind 9. Josh Tenenbaum, MIT

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Postdoctoral Fellow/Research Associate position in the Theoretical and Computational Neuroscience group at Drexel University
by Ilya Rybak 26 Feb '21

26 Feb '21

The Theoretical and Computational Neuroscience group at the Department of Neurobiology and Anatomy, Drexel University College of Medicine, Philadelphia, PA (https://drexel.edu/medicine/about/departments/neurobiology-anatomy/research…) has an open Postdoctoral Fellow/Research Associate position in computational neuroscience to work on computational modeling of neural circuits in the brainstem and spinal cord involved in the neural and biomechanical control of mammalian locomotion. The modeling studies in the group are performed in close, interactive collaborations with several leading laboratories in the US, Canada and Europe performing the related experimental investigations, as well as with several investigators and groups focusing on control of legged robot locomotion. The successful applicant should have strong programming skills, some background in neuroscience and experience in modeling of biological neurons and neural networks. Some mathematical background is desirable. An experience in computational modeling of biomechanics is a plus. If you are interested, please email your CV, statement of research interest, and names of three references to Ilya Rybak (rybak(a)drexel.edu<mailto:rybak@drexel.edu>). The position will remain open until filled. ================================= Ilya A. Rybak, Ph.D. Professor Department of Neurobiology and Anatomy Drexel University College of Medicine 2900 Queen Lane Philadelphia, PA 19129 USA Tel.: (215) 991-8596 Email: rybak(a)drexel.edu https://pubmed.ncbi.nlm.nih.gov/?term=rybak+IA&sort=date <https://www.researchgate.net/profile/Ilya_Rybak/publications/> http://scholar.google.com/citations?hl=en&user=SnA068QAAAAJ http://rybak-et-al.net http://www.drexel.edu/medicine/About/Departments/Neurobiology-Anatomy/Resea…

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Job opening in Juelich, Germany: Coordinator Software Development -, Neuronal Data Analysis Tools
by Martina Reske 26 Feb '21

26 Feb '21

The Institute of Neuroscience and Medicine (INM) at the Jülich Research Center in Germany investigates the structure and function of the brain. The subinstitute Computational and Systems Neuroscience (INM-6) consists of 6 groups that conduct research in the field of computational and systems neuroscience. The Statistical Neuroscience group headed by Prof. Sonja Grün develops computational methods to analyze the joint activity of neuronal networks, and applies these methods to experimental data in the context of international collaborations. As part of the group, the team for Data Science in Electro- and Optophysiology Behavioral Neuroscience, headed by Dr. Michael Denker, develops software tools and processes to support reproducible data acquisition, analysis and model validation using state-of-the-art approaches from neuroinformatics in the spirit of co-design with scientists and closely integrated with the EBRAINS services of the Human Brain Project. To strengthen our international and interdisciplinary team we are looking to recruit a Coordinator Software Development - Neuronal Data Analysis Tools Your Job: * Agile development, maintenance, coordination and distribution of the open-source Elephant analysis software (python-elephant.org) and closely related software tools, including handling inquiries and contributions via issue systems and similar channels * Design of implementations of library features and statistical analysis tools for neuronal data * Development of solutions for software packaging, including deployment on HPC systems * Maintenance and improvement of the interactive software documentation, including content for the presentation of the software on the web and on social media * Parallelization of analysis codes using modern technologies * Development of a service-based architecture for analysis tasks * Review and evaluation of software contributions from a world-wide community with respect to scientific content, the code maturity, and the possibility to be integrated into the Elephant software * Co-design and dissemination of generic conceptual guidelines and project-specific implementations for scientific workflows * Close interaction with developers of EBRAINS and across the globe * Representing the technology at scientific conferences, during educational courses, to the public, and within the framework of the EU Flagship Project “Human Brain Project” Your Profile: * Completed study (Master) in natural sciences, computer science or mathematics * Very good expertise in the programming languages Python and C/C++; knowledge of Matlab and web-based technologies (e.g., javasscript); experience with parallelization techniques (e.g., MPI) and in the standard Linux tools; experience in web-based services for managing software (version control, issue tracking, CI,…) * Experience in implementing scientific analysis methods and creating documentation and course material * Experience in maintaining open source software projects * High ability to work in an interdisciplinary, international team * Structured and organized style of working * Fluent in English, spoken and written * Ability to work independently, systematically and on one’s own responsibility * Good communication skills with software developers and scientists * Willingness to travel Note that it is not necessary to fulfil all of these requirements in order to be considered for the position Our Offer: We work on the very latest issues that impact our society and are offering you the chance to actively help in shaping the change! We support you in your work with: * A position in a creative and international team that conducts research at the frontiers of science, themes ranging from computational neuroscience to simulation technology * World class science environment at the interface between neuroscience and technology on the most complex known systems * Excellent scientific equipment including the fastest supercomputer in Europe * Comprehensive training courses and individual opportunities for personal and professional further development * Extensive company health management * Ideal conditions for balancing work and private life, as well as a family-friendly corporate policy * Flexible working hours and 30 days of annual leave * Targeted services for international employees, e.g. through our International Advisory Service We offer you an exciting and varied role in an international and interdisciplinary working environment. Limited until 31.03.2023, with possible long-term prospects. Salary and social benefits in conformity with the provisions of the Collective Agreement for the Civil Service (TVöD). Depending on the applicant`s qualifications and the precise nature of the tasks, salary grade 13-14 TVöD-Bund. Forschungszentrum Jülich promotes equal opportunities and diversity in its employment relations. We also welcome applications from disabled persons. We look forward to receiving your application until 28.03.2021 via our Online-Recruitment-System<https://www.hrecruiting.de/obf2/index.php?kunden_nr=t5ChjatkIfdwmACO&link_i…>! Kind regards Martina -- Dr. Martina Reske Scientific Coordinator Institute of Neuroscience and Medicine (INM-6) Computational and Systems Neuroscience & Institute for Advanced Simulation (IAS-6) Theoretical Neuroscience Jülich Research Centre and JARA Jülich, Germany Work +49.2461.611916 Work Cell +49.151.26156918 Fax +49.2461.619460 www.csn.fz-juelich.de<http://www.csn.fz-juelich.de> ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Juelich GmbH 52425 Juelich Sitz der Gesellschaft: Juelich Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Volker Rieke Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender), Karsten Beneke (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------

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Assistant Professor / Postdoc position in computational neuroscience and/or developmental robotics at the University of Tokyo
by Yukie Nagai 26 Feb '21

26 Feb '21

Dear colleagues, The International Research Center for Neurointelligence (IRCN) at the University of Tokyo is looking for highly motivated full-time Assistant Professor / Postdoc researchers in the field of computational neuroscience and/or developmental robotics. The selected candidates will join Cognitive Developmental Robotics Laboratory head by Prof. Yukie Nagai and have the opportunity to pursue interdisciplinary research integrating computer science, robotics, neuroscience, cognitive science, and psychology. If you are interested in being considered, please send the required documents to yukie(a)ircn.jp. Assistant Professor / Postdoc Researcher at IRCN, the University of Tokyo https://ircn.jp/en/careers/postdoctoral-fellow-project-researcher-nagai-lab… Cognitive Developmental Robotics Laboratory (Nagai Lab) http://developmental-robotics.jp --------------------------------------------------------------------------------- 1. Job title: Project Assistant Professor / Project Researcher (Postdoctoral Fellow) 2. Starting Date: Negotiable 3. Term: The first contract will be ended on March 31, 2022. The contract is renewable on a fiscal year basis (from April 1 to March 31; every year) according to research budget and research achievements. 4. Place of Work International Research Center for Neurointelligence, The University of Tokyo 7-3-1 Hongo Bunkyo-ku Tokyo, 113-0033 JAPAN 5. Qualifications (Required) - Ph.D. in Computer Science, Ph.D. in Engineering, or equivalent in a related field - Good communication skill in English (Preferred) - Experiences in computational neuroscience, neural network, machine learning, and/or developmental robotics are preferred. 6. Compensation & Benefits - Salary: To be determined in accordance with the University of Tokyo Regulations - Commuter allowance: JPY55,000 per month at maximum - Social Insurance: Eligible for MEXT Mutual Aid Association membership, employees’ pension, employment insurance, and workers’ accident compensation insurance. - Vacation: Annual paid vacation, Sick leave (paid), Special vacation (paid) 7. Working Hours Discretionary labor system, based on 7 hours, 45 minutes per day, or 38 hours 45 minutes per week 8. Holidays Saturdays and Sundays; Statutory public holidays of Japan; Year-end and New Year holidays (December 29 through January 3); Summer holidays 9. Applications - Deadline: When the position is filled - Application documents: (a) Cover letter in English (b) Curriculum vita in English (c) Publication list (d) Name and contact address for two references, one of which should be a previous employer - Submission: Interested applicants should send application materials to: yukie(a)ircn.jp 10. Selection Process All applications will be screened, and only those qualified will be scheduled for an online interview. --------------------------------------------------------------------------------- — Yukie Nagai, Ph.D. Project Professor, The University of Tokyo nagai.yukie(a)mail.u-tokyo.ac.jp | http://developmental-robotics.jp CREST Cognitive Mirroring: http://cognitive-mirroring.org

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Computational postdoctoral position in the lab of Nancy Kopell
by McCarthy, Michelle M 25 Feb '21

25 Feb '21

The group of N. Kopell has an opening for an energetic postdoctoral fellow who will work with experimentalists Don Arnold, Scott Fraser and others on fear conditioning and extinction in zebra fish. Such learning is known to involve temporally complex alterations in multiple brain rhythms in multiple areas of the brain, and the postdoc will work with the Kopell group and the experimentalists to understand the origin of the rhythmic changes and the effects on plasticity needed for conditioning and extinction. The relevant data involve state of the art imaging with a spatial resolution of single spines and temporal resolution fast enough to record fast brain oscillations. The relevant computations will involve networks of biophysically detailed model neurons. The successful applicant will have some background in neuroscience and experience in coding with biophysically detailed equations. Some mathematical background is desirable. If you are interested, please email Kopell: nk(a)bu.edu<mailto:nk@bu.edu>, and have three letters of recommendation sent to her via email. Also include a CV and a statement of research interests.

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Shanahan Foundation Fellowship at the Interface of Data and Neuroscience
by Adrienne L Fairhall 25 Feb '21

25 Feb '21

We are thrilled to announce the *Shanahan Foundation Fellowship at the Interface of Data and Neuroscience* co-hosted by the Allen Institute and the University of Washington (through its eScience Institute and the Computational Neuroscience Center) in Seattle. The fellowships are funded by the Shanahan Family Foundation and the Allen Institute. This three-year data science postdoctoral fellowship program aims to *Integrate Data Scientists into Neuroscience Research*. Fellows will receive interdisiplinary co-mentorship by scientists from the Allen Institute and University of Washington. Data science is broadly interpreted to include those with PhD level training in relevant areas including physical sciences, mathematics, statistics and computer science. Please see details and application instructions here: https://alleninstitute.org/what-we-do/brain-science/careers/shanahan-founda…

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Shanahan Foundation Fellowship at the Interface of Data and Neuroscience
by Anton Arkhipov 25 Feb '21

25 Feb '21

Announcing the Shanahan Foundation Fellowship at the Interface of Data and Neuroscience co-hosted by the Allen Institute and the University of Washington (through its eScience Institute and the Computational Neuroscience Center) and directed by Christof Koch, Ph.D.<https://alleninstitute.org/what-we-do/brain-science/about/team/staff-profil…>, Chief Scientist for the MindScope Program at the Allen Institute. The fellowships are funded by the Shanahan Family Foundation and the Allen Institute. This three-year data science postdoctoral fellowship program aims to Integrate Data Scientists into Neuroscience Research and provides Multidisciplinary, Multi-organizational Co-Mentorship (from the Allen Institute and University of Washington). Please see details and application instructions here: https://alleninstitute.org/what-we-do/brain-science/careers/shanahan-founda… Anton Arkhipov Associate Investigator T: 206.548.8414 E: antona(a)alleninstitute.org<mailto:antona@alleninstitute.org> [Text Description automatically generated] alleninstitute.org<https://alleninstitute.org> brain-map.org

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CFP for PhD candidates in SPIKE NEURAL NETWORK FOR ATMOSPHERIC DATA MINING
by Chaabane Djeraba 25 Feb '21

25 Feb '21

The FOX research team from the CRIStAL laboratory (UMR CNRS) of Lille University - FR, in collaboration with bio-inspired team of Kent University - UK is looking for PhD student candidates on the following subject : SPIKE NEURAL NETWORK FOR ATMOSPHERIC DATA MINING Title : SPIKE NEURAL NETWORK FOR ATMOSPHERIC DATA MINING Abstract of the PhD subject : The objective of the PhD thesis is the study of bio-inspired pattern recognition of atmospheric phenomena, from earth observation satellite. In particular, the thesis project studies neuromorphic learning approach for the classification of spatiotemporal image sequences available in large quantities and without terrain truth or with very limited terrain truth. The data are aerosols, collected from earth observation satellites. The results of the thesis will contribute to make a large amount of atmospheric data accessible, even exploitable by the scientific community in the domain of the detection, tracking and prediction of the air quality. We are looking for excellent PhD candidates in thre domain of AI applied to atmospheric data. Key words : Spike neural network, Machine learning, Artificial intelligence, atmospheric data mining Candidates must hold a Master degree in Computer Science, Mathematics, Statistics. Experience in one or more of the following is a plus: • image processing, computer vision; • machine learning; • research methodology (literature review, experimentation…). Candidates should have the following skills: • good proficiency in English, both spoken and written; • scientific writing; • programming (experience in Python, Java or C++). More details are available here : https://filesender.renater.fr/?s=download&token=76a3ba06-63af-43a7-a34a-40e… The PHD thesis will be funded in the framework of the AI_PhD@Lille program. http://www.isite-ulne.fr/index.php/en/phd-in-artificial-intelligence/ http://www.isite-ulne.fr/wp-content/uploads/2021/02/Thèses-IA_Campagne2021_… www.isite-ulne.fr/wp-content/uploads/2021/02/Thèses-IA_Campagne2021_I_Site… The candidate will be funded for 3 years; he/she is expected to defend his/her thesis and graduate by the end of the contract. The monthly gross salary is around 2000€, including benefits (health insurance, retirement fund, and paid vacations). Additional financial support is expected in the framework of the AI_PhD@Lille program. The position is located in Lille, France. With over 110 000 students, the metropolitan area of Lille is one France's top education student cities. The European Doctoral College Lille Nord-Pas de Calais is headquartered in Lille Metropole and includes 3,000 PhD Doctorate students supported by university research laboratories. Lille has a convenient location in the European high-speed rail network. It lies on the Eurostar line to London (1:20 hour journey). The French TGV network also puts it only 1 hour from Paris, 35 mn from Brussels, and a short trips to other major centres in France such as Paris, Marseille and Lyon. We look forward to receiving your application as soon as possible, but no later than 20.03.2021. — Chaabane Djeraba (PhD), Professeur, Univ. Lille, CNRS, Centrale Lille, UMR 9189 CRIStAL, F-59000 Lille, Bat. IRCICA, 50 avenue Halley, 59650 Villeneuve d’Ascq, France, chabane.djeraba(a)univ-lille.fr

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Open Master, PhD and Postdoc positions in Germany
by Tatjana Tchumatchenko 25 Feb '21

25 Feb '21

Dear friends and colleagues, I would appreciate if you could spread the word among your students and postdocs. My group which is now at the University of Bonn is looking for Master Students, PhD Students and Postdocs Master Students, PhD Students or Postdocs interested in understanding how neuronal networks work, how they respond to stimuli and what role connectivity and single neuron dynamics play for the activity of the brain. Though the focus of my research is on the theory side, my lab has close ties to experimentally oriented labs and Master projects could include both theory and experiments. We are looking for bright and hard-working students with a life-science or quantitative background (physics, math, biology etc). The following PhD projects are currently open: 1) A project exploring the intersection of protein dynamics and machine learning 2) A project designing models describing protein dynamics in dendrites and analyzing imaging data, https://jobrxiv.org/job/institute-of-experimental-epileptology-and-cognitio… The postdoctoral position will address the relation between neurological diseases, protein dynamics and network activity. When applying please attach a CV (with a publication record) and a current copy of academic transcripts and mention at least one academic reference. For more information, please contact Prof. Tatjana Tchumatchenko via email tatjana.tchumatchenko(a)uni-bonn.de https://twitter.com/TTchumatchenko www.tchumatchenko.de

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PhD position in cognitively-inspired reinforcement learning for robotics at Sheffield, UK
by Aditya Gilra 25 Feb '21

25 Feb '21

Dear all, Announcing a PhD position with Dr Aditya Gilra and Dr James Law at the University of Sheffield, UK on "Incorporating self- and world-models in neural networks for flexible robot learning and control". The position is funded for 3.5 years by the EPSRC. Details at: https://www.findaphd.com/phds/project/incorporating-self-and-world-models-i… Candidates will be interviewed on a rolling basis as the applications come in. International (non-UK) candidates are advised to apply well in advance of the 7th March deadline. Don't hesitate to email back for further details. Best, Aditya. -- Aditya Gilra, Lecturer (Assistant Professor), Machine Learning Group <https://www.sheffield.ac.uk/dcs/research/groups/machine-learning> & Neuroscience Institute <https://www.sheffield.ac.uk/neuroscience-institute/research/computational-a…> , Department of Computer Science, University of Sheffield, UK. https://www.sheffield.ac.uk/dcs/people/academic/aditya-gilra http://www.adityagilra.net/

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Three Post-Doc / Research Associate positions in 'Causal eXplainable Reinforcement Learning' project at Sheffield / Vienna / Lille
by Aditya Gilra 25 Feb '21

25 Feb '21

Dear All, Announcing three post-doc / research associate openings to work closely together as part of a ~3 year Chist-Era project, to develop causal inference methods for explainable actions in reinforcement learning ( https://www.chistera.eu/projects/causalxrl) starting in ~Q2, 2021: -> At the University of Sheffield with Dr Aditya Gilra and Prof Eleni Vasilaki, with an emphasis on biologically-plausible neural circuits -- https://www.jobs.ac.uk/job/CEH708/research-associate-in-causal-explainable-… (Deadline: 18th March 2021, but might be extended). -> At the University of Vienna with Prof Moritz Grosse-Wentrup, with an emphasis on causal inference and brain-computer interfaces -- https://ni.cs.univie.ac.at/ (ad to appear). -> At INRIA Lille with Prof Philippe Preux, with an emphasis on reinforcement learning and applications -- https://jobs.inria.fr/public/classic/en/offres/2020-03209 (Deadline: 31st March 2021). Please feel free to email back for any further information. Best, Aditya. -- Aditya Gilra, Lecturer (Assistant Professor), Machine Learning Group <https://www.sheffield.ac.uk/dcs/research/groups/machine-learning> & Neuroscience Institute <https://www.sheffield.ac.uk/neuroscience-institute/research/computational-a…> , Department of Computer Science <https://www.sheffield.ac.uk/dcs>, University of Sheffield <https://www.sheffield.ac.uk/>, UK. https://www.sheffield.ac.uk/dcs/people/academic/aditya-gilra http://www.adityagilra.net/

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Call for a Postdoctoral Researcher in Cognitive and Computational Neuroscience
by Sidarus, Nura 24 Feb '21

24 Feb '21

Dear colleagues, Applications are invited for a Post-doctoral Researcher to work with Dr Nura Sidarus as part of the ESRC funded project “A Computational Approach to Understanding Maladaptive Cognition in Depression”, at Royal Holloway University of London. The project will investigate the neurocomputational mechanisms of maladaptive cognition underlying depressive symptoms, through online, clinical, and neuroimaging studies focusing on attribution and value-based decision-making and learning. We are looking for talented, highly-skilled and motivated researchers with a PhD in a related field (e.g. neuroscience, psychology or cognitive science), with considerable experience applying mathematical modelling techniques to data. Strong abilities in programming and statistics are essential. Expertise in neuroscience of mental health and fMRI are highly desirable. The preferred start date is Summer 2021, or as soon as can be arranged, for up to December 2022. Informal enquiries may be made to Dr Nura Sidarus at Nura.Sidarus(a)rhul.ac.uk<mailto:Nura.Sidarus@rhul.ac.uk> and more information about the grant can be found here<https://gtr.ukri.org/project/87F3B93A-C9BD-4240-BBDC-7596C165DFBF>. Deadline: 6 April 2021 Full details and how apply at: https://jobs.royalholloway.ac.uk/vacancy.aspx?ref=0221-029<https://jobs.royalholloway.ac.uk/vacancy.aspx?ref=0221-029> Best wishes, Nura. __________________________________________________________ Dr Nura Sidarus (she/her) Lecturer | Department of Psychology Royal Holloway University of London | Egham | Surrey | TW20 0EX Office: Wolfson 248 | Tel: +44 (0) 1784 44 3717 Affiliate Member | Institute of Cognitive Neuroscience, UCL nura.sidarus(a)rhul.ac.uk<mailto:%20nura.sidarus@rhul.ac.uk> | www.nurasidarus.com<http://www.nurasidarus.com/> __________________________________________________________ This email, its contents and any attachments are intended solely for the addressee and may contain confidential information. In certain circumstances, it may also be subject to legal privilege. Any unauthorised use, disclosure, or copying is not permitted. If you have received this email in error, please notify us and immediately and permanently delete it. Any views or opinions expressed in personal emails are solely those of the author and do not necessarily represent those of Royal Holloway, University of London. It is your responsibility to ensure that this email and any attachments are virus free.

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Tenure Track in Complex Systems/Neurophysics
by Andre Longtin 24 Feb '21

24 Feb '21

Tenure-track Position in Theoretical Physics of Complex Systems University of Ottawa, Faculty of Science The Department of Physics of the University of Ottawa seeks to fill a tenure-track position in theoretical physics of complex systems. Theoretical neurophysics/artificial intelligence is the main target area for this search, but strong applicants working in complex systems more broadly applied to biological physics, condensed matter physics, photonics, statistical physics, and nonlinear dynamics will be considered. Title of the position: Assistant level but exceptional candidates at higher academic levels are also encouraged to apply. Duties: The functions of a member of the academic staff include, in varying proportions: a) teaching activities; b) scholarly activities pertaining to research and/or professional work; c) academic service activities, d) supervision of graduate students. Terms: Tenure-track position. Wage: As per collective agreement. Benefits package: The University of Ottawa provides a complete compensation package which includes long term disability, basic group life insurance, supplementary health insurance, University of Ottawa Pension Plan, optional life insurance and paid leaves (including maternity, parental and academic leaves: https://hrdocrh.uottawa.ca/info/en-ca/apuo/index.html) Location of work: Department of Physics, University of Ottawa, STEM Complex, 150 Louis-Pasteur, Ottawa, ON K1N 6N5. Contact information: James Harden, Chair, Department of Physics: phychair(a)uottawa.ca<mailto:phychair@uottawa.ca> . Skills requirements: * Education: Ph.D. or equivalent in Physics. * Work experience: Due to the bilingual nature of our major undergraduate program, the successful candidate should be able to teach in French within a year of the appointment. The candidate is expected to lead a vigorous research program, and to contribute to teaching in the major and honors BSc in Physics as well as at the graduate level. We expect a demonstrated interest in interacting with other theorists and experimentalists in the department as well as in the Centre for Neural Dynamics and the Brain and Mind Research Institute, the Centre for Research in Photonics, the Max Planck-uOttawa Centre for Extreme and Quantum Photonics, and/or the Centre for Advanced Materials Research. Posting No.: 21016-SCI www.uottawa.ca/vice-president-academic/faculty-relations/faculty-recruitmen… Application deadline: April 30, 2021. The application material consists of a CV, a two-page summary of research plans and a one-page teaching statement, along with the contact information for three referees. The application should be emailed to Sophie Grimard (sgrimard(a)uottawa.ca<mailto:sgrimard@uottawa.ca>), secretary to the Chair Prof. James Harden, by April 30, 2021. The University of Ottawa is committed to ensuring equity, diversity and inclusion in the scholarly and leadership environments of our students, staff, and faculty. Accordingly, we strongly encourage applications from Indigenous persons, visible minorities members (racialized persons), persons with disabilities, women, as well as from all qualified candidates with the skills and knowledge to productively engage with equitable, diverse and inclusive communities. Candidates who wish to be considered as a member of one or more designated groups are asked to complete the confidential Self-Identiﬁcation Questionnaire, to be completed at the time of application. Please take note of this posting number. This questionnaire can be found online. According to government policy, all qualified candidates are invited to apply; however, preference will be given to Canadians and permanent residents. When submitting your application, please indicate if you are legally entitled to work in Canada. The University of Ottawa provides accommodations for applicants with disabilities throughout the recruitment process. If you are invited to proceed in the selection process, please notify us of any accommodations that you require by contacting the Office of the Vice-Provost, Faculty Relations at 613-562-5958. Any information you send us will be handled respectfully and in complete confidence. The University of Ottawa is proud of its 160-year tradition of bilingualism. Through its Official Languages and Bilingualism Institute, the University provides training to staff members and to their spouses in their second official language. At the time of tenure, professors are expected to have the ability to function in a bilingual setting. Notice of Collection of Personal Information In accordance with the Freedom of Information and Protection of Privacy Act (Ontario) and with University Policy 90, your personal information is collected under the authority of the University of Ottawa Act, 1965 and is intended to be used for the purpose of and those consistent with your employment application and the administration of your employment relationship, if established. If you have any questions regarding this collection of personal information, please contact Office of the Vice-Provost, Faculty Relations at (613) 562-5958 or by email at vra.affairesprofessorales(a)uottawa.ca<mailto:vra.affairesprofessorales@uottawa.ca>.

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'What is self-organizaton?' -- Entropy sepcial issue
by Claudius Gros 24 Feb '21

24 Feb '21

Dear colleagues Together with Damian Zanette, we are editing a an Entropy special issue around a question, that is of particular interest to the neurosciences: 'What is self-organizaton?' Deadline: 15 October 2021 https://www.mdpi.com/journal/entropy/special_issues/self_organzation ------ info ------ Many of us have used the notion of `self-organization' in our studies. What is it precisely, though? A constituent element could be, e.g., the emergence of non-trivial properties from comparatively simple rules. What would simple, non-trivial or complex emergence mean in this context? In this Special Issue, we invite viewpoints, perspectives, and applied considerations on questions regarding the notions of self-organization and complexity. Examples include: Routes In how many different ways can self-organization manifest itself? Would it be meaningful, or even possible, to attempt a classification? Detection Can we detect it automatically, either the process or the outcome? Or do we need a human observer to classify a system as `self-organizing'? This issue may be related to the construction of quantifiers, e.g., in terms of functions on phase space, such as entropy measures. Complexity Is a system self-organizing only when the resulting dynamical state is `complex'? What does `complex' mean exactly? Are there many types of complexity, or just a single one? E.g., it has never been settled whether complexity should be intensive or extensive, if any. Domains Where do we find self-organizing processes? Are the properties of self-organizing systems domain-specific or universal? In which class of systems does self-organization show up most clearly? We are looking forward to your contribution! Claudius Gros %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% ### ### Prof. Dr. Claudius Gros ### http://itp.uni-frankfurt.de/~gros ### ### Complex and Adaptive Dynamical Systems, A Primer ### A graduate-level textbook, Springer (2008/10/13/15) ### ### Life for barren exoplanets: The Genesis project ### https://link.springer.com/article/10.1007/s10509-016-2911-0 ###

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INCF/OCNS Software WG: Dev sessions on Brian (11th Feb) and NeuroFedora (16th Feb)
by Ankur Sinha 22 Feb '21

22 Feb '21

Hello everyone, Apologies for the cross-posts. The INCF/OCNS Software Working Group (WG)[1] is happy to announce its first set of "Dev sessions" where members of the developer teams of commonly used neuroscience software will introduce their software and then discuss their *development* pipelines. The aim of these sessions is to stimulate discussion of the development practices and tools used by different teams to improve the software we use while also improving our knowledge of these practices and tools. We also hope to encourage more users of these tools to contribute to their development to ensure their longevity. Two sessions are currently scheduled: - Marcel Stimberg will speak about the development of the Brian simulator on Feb 11, 2021 1700 UTC[2]. Zoom link: https://ucl.zoom.us/j/91389216854?pwd=cFVWaXRYVFRUdll2c09Xb3dBS2FWQT09 - Ankur Sinha will speak about the development of the NeuroFedora Linux distribution on Feb 16, 2021 1700 UTC[3]. Zoom link: https://ucl.zoom.us/j/94964460359?pwd=MTJmWEY1NHRxd3l4ZGdtTS9NQ1FaZz09 (To prevent spamming/trolling during these sessions, you will need to login to your Zoom account to join them. These sessions will be recorded and made available for later viewing also.) Sessions on GeNN and Neurolib will also follow shortly. If you develop software for neuroscience, we would love to hear about your development pipeline. Please get in touch with the Software WG either on INCF's Neurostars platform[4] or on our GitHub repository[5]. The WG is a community based group that is open to everyone at all levels of their careers (academic or otherwise). Please introduce yourself to the community on our channels to get involved. [1] https://ocns.github.io/SoftwareWG/pages/about.html [2] https://ocns.github.io/SoftwareWG/2021/02/07/dev-session-marcel-stimberg-br… [3] https://ocns.github.io/SoftwareWG/2021/02/07/dev-session-ankur-sinha-neurof… [4] https://neurostars.org/t/ocns-infrastructure-software-tools-sig-meet-and-gr… [5] https://github.com/OCNS/SoftwareWG/issues On behalf of the WG, -- Thanks, Regards, Ankur Sinha (He / Him / His) Research Fellow at the Silver Lab | http://silverlab.org/ Department of Neuroscience, Physiology, & Pharmacology University College London, London, UK Time zone: Europe/London

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PhD Student position at the interface of neuroscience and machine learning
by Rava A. da Silveira 20 Feb '21

20 Feb '21

The lab of Rava Azeredo da Silveira invites applications for a *PhD Student position* at the *interface of computational neuroscience and machine learning*, at the Institute of Molecular and Clinical Ophthalmology Basel (IOB) in Switzerland, an associated institute of the University of Basel. Research projects will involve modeling and data analysis; some projects will be carried out in the framework of collaborations with experimental labs. Questions will be chosen from a range of topics involving neural representations as relating to behavior, neural coding, dynamics and learning. Candidates with backgrounds in mathematics, statistics, artificial intelligence, physics, computer science, and engineering are welcome. Experience with data analysis and proficiency with numerical methods, in addition to familiarity with mathematical and statistical methods, are desirable. Equally desirable are a spirit of intellectual adventure, eagerness, and drive. The positions will come with highly competitive work conditions and salaries. *Application deadline:* For full consideration, please apply by 15 March 2021. *How to apply:* Please send the following information *in one single PDF, to * *silveira(a)iob.ch* <silveira(a)iob.ch>*:* 1. letter on motivation and interests; 2. curriculum vitæ; 3. transcripts of undergraduate and Master grades. In addition, please arrange for three letters of recommendations to be sent to the same email address. In all email correspondence, please include the mention “APPLICATION-PHD” in the subject header, otherwise the application will *not* be considered. *** *The Silveira** Lab* focuses on a range of topics, which, however, are tied together through a central question: How does the brain represent and manipulate information? Among the more concrete approaches to this question, the lab analyses and models neural activity in circuits that can be identified, recorded from, and perturbed experimentally, such as visual neural circuits in the retina and the cortex. Establishing links between physiological specificity and the structure of neural activity yields an understanding of circuits as building blocks of cerebral information processing. On a more abstract level, the lab investigates the representation of information in populations of neurons, from a statistical and algorithmic—rather than mechanistic—point of view, through theories of coding and data analyses. These studies aim at understanding the statistical nature of high-dimensional neural activity in different conditions, and how this serves to encode and process information from the sensory world. In the context of cognitive studies, the lab investigates mental processes such as inference, learning, and decision-making, through both theoretical developments and behavioral experiments. A particular focus is the study of neural constraints and limitations and, further, their impact on mental processes. Neural limitations impinge on the structure and variability of mental representations, which in turn inform the cognitive algorithms that produce behavior. The lab explores the nature of neural limitations, mental representations, and cognitive algorithms, and their interrelations.

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Postdoc opening at the interface of cognitive science and machine learning
by Rava A. da Silveira 20 Feb '21

20 Feb '21

The lab of Rava Azeredo da Silveira invites applications for a *Postdoctoral Researcher* position at the *interface of theoretical/computational cognitive science and machine learning* at the Institute of Molecular and Clinical Ophthalmology Basel (IOB) in Switzerland, an associated institute of the University of Basel. Research questions will be chosen from a range of topics involving models of decision making, learning, and memory, with a particular focus on the structure of human inference, the nature of internal representations/latent variables, and behavioral variability. While the projects will be primarily theoretical, they will involve data analysis and may be complemented with behavioral experiments or carried out in collaboration with experimental labs. Candidates with backgrounds in mathematics, statistics, artificial intelligence, physics, computer science, engineering, and psychology are welcome. Experience with data analysis and proficiency with numerical methods, in addition to familiarity with neuroscience topics and mathematical and statistical methods, are desirable. Equally desirable are a spirit of intellectual adventure, eagerness, and drive. The positions will come with highly competitive work conditions and salaries. *Application deadline:* For full consideration, please apply by 15 March 2021. *How to apply:* Please send the following information *in one single PDF, to * *silveira(a)iob.ch* <silveira(a)iob.ch>*:* 1. letter of motivation; 2. statement of research interests, limited to two pages; 3. curriculum vitæ including a list of publications; 4. any relevant publications that you wish to showcase. In addition, please arrange for three letters of recommendations to be sent to the same email address. In all email correspondence, please include the mention “APPLICATION-POSTDOC” in the subject header, otherwise the application will *not* be considered. *** *The Silveira** Lab* focuses on a range of topics, which, however, are tied together through a central question: How does the brain represent and manipulate information? Among the more concrete approaches to this question, the lab analyses and models neural activity in circuits that can be identified, recorded from, and perturbed experimentally, such as visual neural circuits in the retina and the cortex. Establishing links between physiological specificity and the structure of neural activity yields an understanding of circuits as building blocks of cerebral information processing. On a more abstract level, the lab investigates the representation of information in populations of neurons, from a statistical and algorithmic—rather than mechanistic—point of view, through theories of coding and data analyses. These studies aim at understanding the statistical nature of high-dimensional neural activity in different conditions, and how this serves to encode and process information from the sensory world. In the context of cognitive studies, the lab investigates mental processes such as inference, learning, and decision-making, through both theoretical developments and behavioral experiments. A particular focus is the study of neural constraints and limitations and, further, their impact on mental processes. Neural limitations impinge on the structure and variability of mental representations, which in turn inform the cognitive algorithms that produce behavior. The lab explores the nature of neural limitations, mental representations, and cognitive algorithms, and their interrelations.

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Valentin Braitenberg Award for Computational Neuroscience - call for nominations!
by Alexandra Stein 18 Feb '21

18 Feb '21

Dear Colleagues, The Bernstein Network Computational Neuroscience invites nominations for the Valentin Braitenberg Award for Computational Neuroscience. The Bernstein Network presents the award biennially to a scientist in recognition of outstanding research that contributes to the understanding of the functioning of the brain. The major criterion for the award is the impact or potential impact of the recipient's research on the field of brain science. In the spirit of Valentin Braitenberg's own research, special emphasis is given to theoretical studies elucidating the functional implications of brain structures and their neuronal network dynamics. The awardee receives €5.000 prize money, donated by the Autonome Provinz Bozen Südtirol, as well as a Golden Neuron pin. The award will be presented in a special award ceremony at the online Bernstein Conference 2021, followed by a keynote lecture of the Braitenberg Awardee. Nominations may be submitted by scientists working in the field of computational neuroscience and should include the following documents: - One-page laudation, in which the scientific work of the candidate is honored with regard to the award criteria - CV and list of publications Deadline for nominations is April 30, 2021 by email to a.stein(a)fz-juelich.de<mailto:a.stein@fz-juelich.de> Please note that self-nominations are not permitted. The call for nominations can be found under the following URL: https://www.bernstein-network.de/en/the-network/awards/Call_Braitenberg_2020<http://www.nncn.de/en/bernstein-conference/2018/braitenberg_award> For inquiries please contact a.stein(a)fz-juelich.de<mailto:a.stein@fz-juelich.de>. Best regards, Alexandra Stein -- Dr. Alexandra Stein Head of Bernstein Coordination Site Bernstein Network Computational Neuroscience | Bernstein Coordination Site (BCOS) Branch Office of the Forschungszentrum Jülich at the University of Freiburg Hansastr. 9A | 79104 Freiburg, Germany phone: (+49) 0761 203 9583 mobile: (+49) 0151 67114645 mail: a.stein(a)fz-juelich.de<mailto:a.stein@fz-juelich.de> web: www.bernstein-network.de<http://www.bernstein-network.de> Twitter: BernsteinNeuro YouTube: Bernstein TV LinkedIn: Bernstein Network Computational Neuroscience, Germany ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Juelich GmbH 52425 Juelich Sitz der Gesellschaft: Juelich Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Volker Rieke Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender), Karsten Beneke (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------

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Faculty Position in Comp-Neuro / ML at Champalimaud - Deadline February 28, 2021
by Christian Machens 18 Feb '21

18 Feb '21

Faculty Position in Computational Neuroscience / Machine Learning at Champalimaud Research - Deadline February 28, 2021 The Champalimaud Foundation (CF) invites applications for Group Leaders to join a dynamic and highly collaborative international research institute in Lisbon, Portugal. Champalimaud Research (CR) is seeking to expand its Neuroscience Programme (CNP) with one Junior Group Leader (Assistant Professor equivalent). About you We welcome applicants with expertise in modern Machine Learning and Artificial Intelligence. Suitable research areas for the recruited applicant include statistical methods for complex, high-dimensional datasets, artificial neural networks, computer vision, reinforcement learning, and control theory. We will consider candidates that work on foundational issues in these fields, as well as candidates who take more applied approaches. The ideal candidate should present a research program with both fundamental research and applied elements, and have a strong desire to collaborate with existing teams within CR and CF, including the Champalimaud Clinical Centre. Special attention will be given to applications of individuals from underrepresented groups. About the position To promote risk-taking research, generous support for salary, start-up and annual running costs will be provided. Researchers will be based at the Champalimaud Centre for the Unknown (CCU), a highly interactive and innovative scientific environment where the Neuroscience Programme is composed of groups applying a range of theoretical and experimental approaches to understand the algorithmic, physiological and circuit mechanisms of behaviour. Researchers routinely collect rich datasets ripe for development and application of new analysis tools or comparison with theory. These datasets include high dimensional neurophysiological and imaging data, to -omics, and various measures of behaviour. About us The Champalimaud Centre for the Unknown is situated on the waterfront in Lisbon. English is the official language of the Centre. Lisbon has a sunny Atlantic-Mediterranean climate, vibrant culture, international schools, convenient housing options and is considered one of the world’s safest cities. About the application Applications should include a (1) detailed scientific curriculum vitae, which may include any mentoring, outreach, or policy experiences, (2) a brief summary of past accomplishments (max. two pages), (3) a description of future research plans (max. four pages), (4) three key publications (pdf-files preferred, preprints welcome) along with (5) brief (~200 word each) descriptions of their significance, and (6) contact details for three individuals who can provide recommendation letters upon request. Applications or informal inquiries should be addressed to careers(a)research.fchampalimaud.org <mailto:careers@research.fchampalimaud.org> with the subject “Neuro GL Call 2020 – YOUR LAST NAME”. The deadline for the applications is February 28, 2021 and review of applications will begin in March, 2021. Non-discrimination and equal access policy The Champalimaud Foundation actively promotes non-discrimination and equal access, so that no candidate may be privileged, favored, prejudiced or deprived of any right or excluded from any duty on the basis of age, sex, gender identity, sexual orientation, race/ethnicity, disability, chronic illness, language, nationality, territory of origin, family status (marital, pregnancy and maternity, having or not having dependents), socioeconomic situation, education, religion, political or ideological beliefs, trade union membership, or on any other grounds which are not deemed relevant for the performance of the duties associated with the advertised position.

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INCF/OCNS Software WG: Dev session on Neurolib (23rd Feb)
by Ankur Sinha 18 Feb '21

18 Feb '21

Hello everyone, Apologies for the cross-posts. The INCF/OCNS Software Working Group (WG)[1] is happy to announce the next "Dev session" on Neurolib[2] where Caglar Cakan will introduce the software and then discuss its *development* pipeline. The session will be held on Feb 23, 2021 at 1700 UTC[3]. Zoom link: https://tu-berlin.zoom.us/j/68960683644?pwd=a2JTTS8xZXhwY0ZtQ0J0aktRVW52Zz09 The aim of these sessions is to stimulate discussion of the development practices and tools used by different teams to improve the software we use while also improving our knowledge of these practices and tools. We also hope to encourage more users of these tools to contribute to their development to ensure their longevity. The abstract of the talk is below: neurolib is a computational framework for whole-brain modelling written in Python. It provides a set of neural mass models that represent the average activity of a brain region on a mesoscopic scale. In a whole-brain network model, brain regions are connected with each other based on structural connectivity data, i.e. the connectome of the brain. neurolib can load structural and functional data sets, set up a whole-brain model, manage its parameters, simulate it, and organize its outputs for later analysis. The activity of each brain region can be converted into a simulated BOLD signal in order to calibrate the model to empirical data from functional magnetic resonance imaging (fMRI). Extensive model analysis is possible using a parameter exploration module, which allows to characterize the model’s behaviour given a set of changing parameters. An optimization module allows for fitting a model to multimodal empirical data using an evolutionary algorithm. Besides its included functionality, neurolib is designed to be extendable such that custom neural mass models can be implemented easily. neurolib offers a versatile platform for computational neuroscientists for prototyping models, managing large numerical experiments, studying the structure-function relationship of brain networks, and for in-silico optimization of whole-brain models. ----- If you develop software for neuroscience, we would love to hear about your development pipeline. Please get in touch with the Software WG either on INCF's Neurostars platform[4] or on our GitHub repository[5]. The WG is a community based group that is open to everyone at all levels of their careers (academic or otherwise). Please introduce yourself to the community on our channels to get involved. [1] https://ocns.github.io/SoftwareWG/pages/about.html [2] https://neurolib-dev.github.io/ [3] https://ocns.github.io/SoftwareWG/2021/02/12/dev-session-caglar-cakan-neuro… [4] https://neurostars.org/t/ocns-infrastructure-software-tools-sig-meet-and-gr… [5] https://github.com/OCNS/SoftwareWG/issues On behalf of the WG, -- Thanks, Regards, Ankur Sinha (He / Him / His) Research Fellow at the Silver Lab | http://silverlab.org/ Department of Neuroscience, Physiology, & Pharmacology University College London, London, UK Time zone: Europe/London

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