- Comp-neuro - lists.cnsorg.org

Assistant Prof (W1) TT @ Uni Osnabrück, Germany
by Ulrich G. Hofmann 25 Feb '22

25 Feb '22

This open position may be of interest to Comp Neuro scientists: https://www.uni-osnabrueck.de/universitaet/stellenangebote/stellenangebote-… ulrich hofmann

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Announcing Okinawa/OIST Computational Neuroscience Course 2022
by Erik De Schutter 25 Feb '22

25 Feb '22

OKINAWA/OIST COMPUTATIONAL NEUROSCIENCE COURSE 2022 Methods, Neurons, Networks and Behaviors June 13 to June 29, 2022 Okinawa Institute of Science and Technology Graduate University, Japan https://groups.oist.jp/ocnc After two consecutive cancelations due to COVID-19, OCNC 2022 will take place on June 13-29, preceding Neuro2022 (https://neuro2022.jnss.org) in Okinawa. Depending on the immigration situation in June the course will be either pure on-site or hybrid: a mixture of on-site and remote. The aim of the Okinawa/OIST Computational Neuroscience Course is to provide opportunities for young researchers with theoretical backgrounds to learn the latest advances in neuroscience, and for those with experimental backgrounds to have hands-on experience in computational modeling. We invite graduate students and postgraduate researchers to participate in the course, held from June June 13 through June 29, 2022 at an oceanfront seminar house of the Okinawa Institute of Science and Technology Graduate University. Applications are through the course web page (https://groups.oist.jp/ocnc) only: January 26 - February 28, 2022. Applicants will receive confirmation of acceptance in April. The 17th OCNC will be a shorter course than in the past: a two-week course covering single neurons, networks, and behaviors with time for student projects. Teaching will focus on methods with hands-on tutorials during the afternoons, and lectures by international experts. The course has a strong hands-on component based on student proposed modeling or data analysis projects, which are further refined with the help of a dedicated tutor. Applicants are required to propose their project at the time of application. However in the case of a hybrid format course, only on-site students will receive support for student projects. There is no tuition fee. The sponsor will provide lodging and meals during the course and may provide partial travel support. We hope that this course will be a good opportunity for theoretical and experimental neuroscientists to meet each other and to explore the attractive nature and culture of Okinawa, the southernmost island prefecture of Japan. Invited faculty: • Michael Berry II (Princeton University, USA) • Anne Churchland, Cold Spring Harbor Labs, USA • Erik De Schutter (OIST) • Kenji Doya (OIST) • Gaute Einevoll, Norwegian University of Life Sciences (online) • Tomoki Fukai (OIST) • Boris Gutkin (Ecole Normale Supérieure, Paris, France) • Yukiyasu Kamitani, Kyoto University, Japan • Bernd Kuhn (OIST) • Sang Wan Lee, KAIST, South Korea • Devika Narain, Erasmus Medical Center, Rotterdam, Netherlands • Viola Priesemann, MPG Göttingen, Germany (online) • Ivan Soltesz, Stanford University, USA • Greg Stuart, Australian National University, Australia • Greg Stephens (OIST) • Saori Tanaka, (ATR, Japan) • Marylka Yoe Uusisaari (OIST)

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14ᵗʰ Advanced Scientific Programming in Python in Bilbao Spain, 5–11 September, 2022
by Jakob Jordan 23 Feb '22

23 Feb '22

ASPP2022: 14ᵗʰ Advanced Scientific Programming in Python ======================================================== a Summer School by the ASPP faculty and the Faculty of Engineering of the Mondragon University, Bilbao https://aspp.school Scientists spend more and more time writing, maintaining, and debugging software. While techniques for doing this efficiently have evolved, only few scientists have been trained to use them. As a result, instead of doing their research, they spend far too much time writing deficient code and reinventing the wheel. In this course we will present a selection of advanced programming techniques and best practices which are standard in the industry, but especially tailored to the needs of a programming scientist. Lectures are devised to be interactive and to give the students enough time to acquire direct hands-on experience with the materials. Students will work in pairs throughout the school and will team up to practice the newly learned skills in a real programming project — an entertaining computer game. We use the Python programming language for the entire course. Python works as a simple programming language for beginners, but more importantly, it also works great in scientific simulations and data analysis. We show how clean language design, ease of extensibility, and the great wealth of open source libraries for scientific computing and data visualization are driving Python to become a standard tool for the programming scientist. This school is targeted at Master or PhD students and Post-docs from all areas of science. Competence in Python or in another language such as Java, C/C++, MATLAB, or R is absolutely required. Basic knowledge of Python and of a version control system such as git, subversion, mercurial, or bazaar is assumed. Participants without any prior experience with Python and/or git should work through the proposed introductory material before the course. We are striving hard to get a pool of students which is international and gender-balanced. Date & Location =============== 5–11 September, 2022. Bilbao, Spain. Application =========== You can apply online: https://aspp.school Application deadline: 23:59 UTC, Sunday 1 May, 2022. There will be no deadline extension, so be sure to apply on time. Be sure to read the FAQ before applying: https://aspp.school/wiki/faq Participation is for free, i.e. no fee is charged! Participants however should take care of travel, living, and accommodation expenses by themselves. We are in the process of securing some funds for supporting students with accommodation and living costs. Program ======= • Version control with git and how to contribute to open source projects with GitHub • Best practices in data visualization • Testing and debugging scientific code • Advanced NumPy • Organizing, documenting, and distributing scientific code • Advanced scientific Python: context managers and generators • Writing parallel applications in Python • Profiling and speeding up scientific code with Cython and numba • Programming in teams Faculty ======= • Jakob Jordan, Department of Physiology, University of Bern Switzerland • Jenni Rinker, Department of Wind Energy, Technical University of Denmark, Roskilde Denmark • Lisa Schwetlick, Experimental and Biological Psychology, Universität Potsdam Germany • Nicolas Rougier, Inria Bordeaux Sud-Ouest, Institute of Neurodegenerative Diseases, University of Bordeaux France • Pamela Hathway, GfK, Nuremberg Germany • Pietro Berkes, NAGRA Kudelski, Lausanne Switzerland • Rike-Benjamin Schuppner, Institute for Theoretical Biology, Humboldt-Universität zu Berlin Germany • Tiziano Zito, Department of Psychology, Humboldt-Universität zu Berlin Germany • Zbigniew Jędrzejewski-Szmek, Red Hat Inc., Warsaw Poland Organizers ========== Head of the organization for ASPP and responsible for the scientific program: • Tiziano Zito, Department of Psychology, Humboldt-Universität zu Berlin Germany Organization team in Bilbao: • Aitor Morales-Gregorio, Theoretical Neuroanatomy, Institute of Neuroscience and Medicine (INM-6), Forschungszentrum Jülich, Germany • Carlos Cernuda, Data Analysis & Cybersecurity, Faculty of Engineering, Mondragon Unibertsitatea, Bilbao Spain Website: https://aspp.school Contact: info(a)aspp.school

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Call for proposals for workshops and tutorials at CNS*2022 Melbourne
by Thomas Nowotny 23 Feb '22

23 Feb '22

OCNS Organisation for Computational Neurosciences Dear com-neuro community, We are requesting proposals for workshops and tutorials at CNS*2022 from the international community of computational neuroscientists. The 31st Annual Computational Neuroscience Meeting, CNS*2022, will be held at Melbourne, Australia, 16-20 July 2022. Proposals from all levels of faculty as well as advanced postdoctoral fellows are welcome. Tutorials are to be held on the first day and workshops on the last two days of the CNS*2022 Meeting. This is an excellent opportunity to reach international audience of computational neuroscience researchers participating in this meeting. Please see the links below for detailed information. Questions regarding workshops and tutorials should be addressed to workshops(a)cnsorg.org<mailto:workshops@cnsorg.org> or tutorials(a)cnsorg.org<mailto:tutorials@cnsorg.org> as appropriate. We are looking forward to your submissions. CALL FOR WORKSHOPS: https://www.cnsorg.org/cns-2022-call-for-workshops Priority Deadline for proposals: April 15 Jorge Mejias, Workshops Chair for CNS*2022 CALL FOR TUTORIALS: https://ocns.memberclicks.net/cns-2022-call-for-tutorials Deadline for proposals: April 15 Anca Doloc-Mihu, Tutorials Chair for CNS*2022 With kind regards, Thomas Nowotny, Vice President, on behalf of The OCNS Board of Directors -- Prof Thomas Nowotny Head of AI Research Group School of Engineering and Informatics University of Sussex Falmer, Brighton BN1 9QJ, UK Phone: +44-1273-678593 FAX: +44-1273-877873

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Fully funded PhD position, University of Groningen/NL
by Michael Biehl 23 Feb '22

23 Feb '22

*Last reminder, j**ust a few days left to apply! * A *fully funded PhD position* (4 years) in the *Statistical **Physics of Neural Networks* is available at the University of Groningen, The Netherlands, see https://www.rug.nl/about-ug/work-with-us/job-opportunities/?details=00347-0… for details and application details. Applications *(before March 1)* are only possible through this webpage. The title of the project is "The role of the activation function for feedforward learning systems (RAFFLES)". For further information please contact Michael Biehl. -- ---------------------------------------------------------- Prof. Dr. Michael Biehl Bernoulli Institute for Mathematics, Computer Science and Artificial Intelligence P.O. Box 407, 9700 AK Groningen The Netherlands Tel. +31 50 363 3997 https://www.cs.rug.nl/~biehl m.biehl(a)rug.nl

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NEUROTECH: Call for tutorials on Neuromorphic Computing
by Elisa Donati 23 Feb '22

23 Feb '22

Dear Colleagues, Given the success of last year’s NEUROTECH educational program, we have planned a new tutorial series for 2022! We are happy to announce a call for tutorials on the different aspects of the neuromorphic field. These tutorials will cover an aspect of active research in Neuromorphic Technology, with the aim of enabling a non-expert audience to get started on it. They will be held online via zoom, should be about 45 minutes in length, including a discussion session. Tutorials could be given by experienced researchers as well as emerging leaders who seek to disseminate their research methods to a wider audience. Presenters will benefit from the high visibility of the tutorial sessions within the NEUROTECH programme, and from the wider dissemination of their research methods and potential impact generated by other researchers. Proposals should not exceed 1 page (A4 or letter) in length. The proposal should outline the topic and indicate how the audience will benefit from it. Send your proposal by 07.03.2022 to educational(a)neurotechai.eu with the subject "Proposal for NEUROTECH Educational Tutorial". For more information: Call for Tutorials About NEUROTECH: The NEUROTECH project is committed to community building around Neuromorphic Technology. The educational programme is an essential pillar of our activities. Last year we have built a strong educational programme around a series of talks by leaders in the field (https://neurotechai.eu) Kind Regards, The NEUROTECH Educational Team

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Survey of the Allen Institute modeling software
by Anton Arkhipov 23 Feb '22

23 Feb '22

Dear Colleagues, We are conducting a survey about the Allen Institute’s neuroscience modeling software: https://forms.gle/R1ThdxBE98FhG1uQ6 The survey covers the Brain Modeling ToolKit, the SONATA file format, and the Visual Neuronal Dynamics visualization tool. It only takes several minutes, and we will appreciate to hear from you! Whether you are using our software, may be interested in using it, or are happily using something else, we will be glad to hear your opinion about our tools and modeling software in neuroscience in general. Please let us know what works, what doesn’t, and what new features would be helpful. Results of the survey will be used to improve our modeling software at the service of the community. This work is conducted under the NIH grant U24NS124001. Thank you, and we are looking forward to hearing from you! Anton. Anton Arkhipov Associate Investigator T: 206.548.8414 E: antona(a)alleninstitute.org<mailto:antona@alleninstitute.org> [Text Description automatically generated] alleninstitute.org<https://alleninstitute.org> brain-map.org

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[Meetings] CRNS Talk Series (3) - Live Talk by Dr. Séverin Lemaignan - PAL Robotics, Spain
by Amir Aly 22 Feb '22

22 Feb '22

Dear All * Apologies for cross-posting* The *Center for Robotics and Neural Systems* (CRNS) is pleased to announce the talk of *Dr. Séverin Lemaignan* who is a senior scientist at *PAL Robotics*, Spain on Wednesday, March 2nd from *11:00 am* to *12:30* *pm* (*London time*) over *Zoom*. >> *Events*: The CRNS talk series will cover a wide range of topics including social and cognitive robotics, computational neuroscience, computational linguistics, cognitive vision, machine learning, AI, and applications to autism. More details are available here: https://www.plymouth.ac.uk/research/robotics-neural-systems/whats-on <https://eur03.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.plymo…> >> *Link for the next event (No Registration is Required)*: Join Zoom Meeting https://plymouth.zoom.us/j/97451532624?pwd=ZmVSUzkrT3lUNWdXNmFEekNYSjRQUT09… >> *Title of the talk*: Teaching robots autonomy in social situations *Abstract*: Participatory methodologies are now well established in social robotics to generate blueprints of what robots should do to assist humans. The actual implementation of these blueprints, however, remains a technical challenge for us, roboticists, and the end-users are not usually involved at that stage. In two recent studies, we have however shown that, under the right conditions, robots can directly learn their behaviours from domain experts, replacing the traditional heuristic-based or plan-based robot controllers by autonomously learnt social policies. We have derived from these studies a novel 'end-to-end' participatory methodology called LEADOR, that I will introduce during the seminar. I will also discuss recent progress on human perception and modeling in a ROS environment with the emerging ROS4HRI standard. >> If you have any questions, please don't hesitate to contact me, Regards ---------------- *Dr. Amir Aly* Lecturer in Artificial Intelligence and Robotics Center for Robotics and Neural Systems (CRNS) School of Engineering, Computing, and Mathematics Room B332, Portland Square, Drake Circus, PL4 8AA University of Plymouth, UK

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9th Iberian Conference on Perception, Barcelona, June 2022
by Xavier Otazu Porter 22 Feb '22

22 Feb '22

Dear colleague, perception researcher, We are pleased to invite you to attend the 9th Iberian Conference on Perception (CIP 2022), which will be held on June 27th-29th, 2022, in Barcelona, Catalonia, Spain (https://www.cip2022.org<https://www.cip2022.org/>). CIP focuses on perception, with an emphasis on, but no limitation to, several aspects of perception such as motion perception, spatial vision, stereopsis, colour, perception and action, attention and cognition, audition, multisensory integration, reading and speech, brain imaging, art and aesthetics, perception in clinical populations and computational modelling. In addition to talks on this broad range of topics, the conference will include five symposia, poster sessions, and two keynote lectures from young internationally renowned scientists, Dr Iris Groen, from the University of Amsterdam, and Prof Manuel Spitschan, from the Max Planck Institute in Tübingen.. The event will take place at the Casa Convalescència<https://uab-casaconvalescencia.org/es/> in the modernist historical complex of Hospital de la Santa Creu i Sant Pau <https://www.santpaubarcelona.org/> in Barcelona, which was declared a UNESCO World Heritage Site in 1997. The COVID-19 pandemic forced us to break with the biennial organisation of CIP and to cancel the 2021 edition. For this year's edition, the health and safety of our speakers, attendees and staff will be a top priority. We designed the conference around this premise. The venue and program will allow social distancing while on site and regular ventilation of the conference room. All attendees will be asked to continue to wear face masks (unless medically exempt) during the conference and throughout all the premises of the Casa Convalescència. These policies will continue to be reviewed in line with government and local authority updates. We look forward to an exciting scientific programme and rely on the renewed eagerness of the research community to submit abstracts on their recent studies. Abstracts deadline: 15th April Registration: From February 15th to 1st June The Organising Committee Dr Xavier Otazu Dr Xim Cerda-Company Dr C. Alejandro Parraga Dr Olivier Penacchio Computer Vision Center<http://www.cvc.uab.cat> CONFIDENTIALITY WARNING<http://www.cvc.uab.es/?page_id=7475>

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Postdoctoral position in natural language processing and neuroscience, University of Geneva, Switzerland
by Timothée Proix 21 Feb '22

21 Feb '22

Dear all, a postdoctoral position is available under the supervision of Prof. Pierre Mégevand (https://www.unige.ch/medecine/neucli/en/groupes-de-recherche/1034megevand/) and Timothée Proix (https://ndlab.ch/) at the University of Geneva, Switzerland. The project lies at the interface between natural language processing and intracranial EEG data analysis. The goal of the project is to understand the neural representations of speech production and perception in conversations. The candidate will contribute to acquisition and analysis of intracranial EEG data and speech recordings. Applicants should have prior experience with machine learning methods for natural language processing, as well as in advanced data analysis techniques. Experience in electrophysiological recordings and knowledge in neuroscience is a significant advantage. The research will be performed at the campus Biotech in the university of Geneva, in collaboration with the Geneva University Hospital. The positions are funded by the private foundation of the Geneva University Hospital, and salaries are in compliance with guidelines of the University of Geneva. The ideal start is May 2022, with some flexibility. To apply, send a motivation letter, CV, and contact information for 2-3 references, as well as any other relevant documents to the Prof. Pierre Mégevand (pierre.megevand (at) unige.ch) as well as Timothée Proix (timothee.proix (at) unige.ch). Screening of applications will start by March 2022 and will continue until the position is filled. Timothée Proix

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NSF Neuronex Big Brain Imaging Hybrid Workshop @ Boston University - April 7-8, 2022
by Chen, Jerry 21 Feb '22

21 Feb '22

We are proud to announce the 2022 Big Brain Imaging Workshop hosted jointly by the NSF NeuroNex Nemonic Hub as well as the Boston University Neurophotonics Center! This two-day hybrid workshop will take place at Boston University and online on Thursday, April 7th and continue on Friday, April 8th, 2022. The 2022 Big Brain Imaging Workshop is an opportunity to join in the discussion on optical approaches for cellular resolution imaging of neuronal populations that have been highly instrumental for uncovering the principles of neural circuit function. To date, the microscope technology development for imaging the nervous system has largely been focused on applications on a subset of model species with smaller, optically accessible brains (ex. c. elegans, zebrafish, mice). The ability to translate these technologies to species with brains that are both physically larger and less optically accessible remains a challenge. The topic of the workshop is focused on advancing cellular resolution brain imaging techniques in "larger" brains of mammalian species (ex. rats, cats, ferrets, marmosets, macaques). The goal is to bring neuroscientists and optical engineers together to discuss challenges and come up with potential solutions that will pave the way for the next generation of microscopes that can be applied to a greater number of model organisms. Invited Speakers Daniel Aharoni - University of California, Los Angeles Adam Charles - Johns Hopkins University Anna Devor - Boston University David Fitzpatrick - Max Planck Institute Florida Emily Gibson - University of Colorado Anschutz Prakash Kara - University of Minnesota Jerome Mertz - Boston University Kristina Nielsen - Johns Hopkins University Anitha Pasupathy - University of Washington Bijan Perasan - New York University Nicholas Priebe - University of Texas, Austin Eyal Seidemann - University of Texas, Austin Lei Tian - Boston University Alipasha Vaziri - Rockefeller University Chris Xu - Cornell University In addition to the invited speakers, spots are available for short talks by visiting the registration page and submitting a brief abstract: For more information and free registration, visit: https://nemonic.ece.ucsb.edu/index.php/Big_Brain Jerry Chen, PhD Assistant Professor Department of Biology Boston University www.chen-lab.org<http://www.chen-lab.org> jerry(a)chen-lab.org<mailto:jerry@chen-lab.org> Jerry Chen, PhD Assistant Professor Department of Biology Boston University www.chen-lab.org<http://www.chen-lab.org> jerry(a)chen-lab.org<mailto:jerry@chen-lab.org>

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postdoc in Computational Neuroscience, Cambridge-Columbia collaboration
by Máté Lengyel 18 Feb '22

18 Feb '22

Postdoc in Computational Neuroscience, Cambridge-Columbia collaboration We are seeking a highly creative and motivated postdoctoral fellow to work on a collaborative project between the labs of Guillaume Hennequin and Máté Lengyel at the Computational and Biological Learning Lab, Department of Engineering, University of Cambridge, and Daniel Wolpert at the Zuckerman Mind Brain Behavior Institute, Columbia University. The project studies neural network mechanisms underlying the context-dependent (continual) learning of motor repertoires and ties together several threads of research recently developed in our labs, based on the following key publications (note that several are collaborative between our groups): - JB Heald, M Lengyel, DM Wolpert (2021) Contextual inference underlies the learning of sensorimotor repertoires. Nature 600:489-493. - TC Kao, MS Sadabadi, G Hennequin (2021). Optimal anticipatory control as a theory of motor preparation: a thalamo-cortical circuit model. Neuron 109:1567-1581. - TC Kao, KT Jensen, GM van de Ven, A Bernacchia, G Hennequin (2021) Natural continual learning: success is a journey, not (just) a destination. NeurIPS, https://tinyurl.com/2jfyss8c - Echeveste R, Aitchison L, Hennequin G, Lengyel M (2020) Cortical-like dynamics in recurrent circuits optimized for sampling-based probabilistic inference. Nature Neuroscience 23:1138-1149. The postdoc will be based in Cambridge, with an opportunity for regular visits to Columbia. The successful candidate will have - a strong quantitative background - demonstrable interest in theoretical neuroscience - obtained (or be close to the completion of) a PhD or equivalent in computational neuroscience, physics, mathematics, computer science, machine learning or a related field Preference will be given to candidates with - previous experience in computational neuroscience, especially with the dynamics of recurrent neural network, and function-optimized neural networks - sufficient programming skills to run numerical simulations and to use large scale optimization packages - expertise with advanced data analysis and Bayesian techniques For further details and to send your application, please go to https://www.jobs.cam.ac.uk/job/33691/. For informal queries, please contact Guillaume Hennequin <g.hennequin(a)eng.cam.ac.uk>, Máté Lengyel <m.lengyel(a)eng.cam.ac.uk> or Daniel Wolpert <wolpert(a)columbia.edu>. Máté Lengyel -- Professor of Computational Neuroscience Computational and Biological Learning Lab Cambridge University Engineering Department Trumpington Street, Cambridge CB2 1PZ, UK tel: +44 (0)1223 748 532, fax: +44 (0)1223 765 587 email: m.lengyel(a)eng.cam.ac.uk web: lengyellab.org

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KogWis2022 | 15th Biannual Conference of the German Cognitive Science Society +++ The call for symposia is open
by Constantin Rothkopf 18 Feb '22

18 Feb '22

Event: The 15th Biannual Conference of the German Cognitive Science Society, KogWis2022 Theme: Understanding Minds Date: 5.-7. September 2022 Location: Freiburg im Breisgau, Germany Host: Albert-Ludwigs University Freiburg Web: https://www.kogwis2022.uni-freiburg.de/ Abstract: The 15. biannual Conference of the German Cognitive Science Society (KogWis2022) will take place from 5.-7. September 2022 in Freiburg i.Br., Germany, organized by the Center for Cognitive Science. The theme “Understanding Minds” reflects two perspectives: The conference provides a forum for all topics in the study of how minds – both human and artificial – operate. The theme also puts a specific spotlight on how cognitive systems make sense of the world, in particular in language comprehension and communication. The Call for Symposia for the 15th Biannual Conference of the German Cognitive Science Society, KogWis2022, is now open! https://www.kogwis2022.uni-freiburg.de/ Confirmed keynote speakers are: Dedre Gentner, Northwestern University, Illinois Seana Coulson, University of California, San Diego Marcel Brass, Humboldt University, Berlin Matthew Crocker, Saarland University, Saarbrücken For any inquiries please use the conference e-mail-address kogwis2022(a)cognition.uni-freiburg.de. Further information is available on the conference website: www.kogwis2022.uni-freiburg.de. Organising Committee: Evelyn Ferstl, Lars Konieczny, Rul von Stülpnagel, Lisa Zacharski, Judith Beck

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MBL Methods in Computational Neuroscience Course
by Stephen A. Baccus 18 Feb '22

18 Feb '22

Applications are open for the Methods in Computational Neuroscience course at the Marine Biology Laboratory in Woods Hole, MA. The course will run from July 28 to August 24, 2022, and the online application form can be found at: https://www.mbl.edu/education/courses/methods-in-computational-neuroscience/<https://ws2.mbl.edu/studentapp/studentapp.asp?courseid=MCN> The course application deadline is *March 30*. The course covers a range of topics in computational neuroscience including neuronal biophysics, neural coding & information processing, circuit dynamics, learning & memory, motor control, and cognitive processing & disease. In addition, numerous tutorials and problem sets will cover a broad range of computational and mathematical modeling methods. The course strongly emphasizes the collaboration between theory and experiment in solving neuroscience problems, and lectures will be given by a mixture of theorists and experimentalists. The final weeks of the course are primarily reserved for work on projects that students design in collaboration with the resident faculty. Further information can be found on the MCN website: http://www.mbl.edu/mcn/ 2022 Course Directors: Stephen Baccus, Stanford University Xiao Jing Wang, New York University 2022 Faculty: Larry Abbott, Columbia University Tim Behrens, Univ. College London Emery Brown, MIT Randy Buckner, Harvard University Anne Churchland, UCLA Claudia Clopath, Imp. College London Albert Compte, IDIBAPS Shaul Druckmann, Stanford University Uri Eden, Boston University Bard Ermentrout, U. of Pittsburgh Adrienne Fairhall, U. of Washington Michale Fee, MIT James Fitzgerald, Janelia Res., HHMI Loren Frank, UCSF Stefano Fusi, Columbia University Surya Ganguli, Stanford University Paul Glimcher, New York University Mark Goldman, UC Davis Nancy Kopell, Boston University Eve Marder, Brandeis University Yiota Poirazi, IMBB-FORTH David Redish, U. Minnesota Terry Sejnowski, Salk Institute Reza Shadmehr, Johns Hopkins Univ. Sara Solla, Northwestern University Haim Sompolinsky, Hebrew University Nelson Spruston, Janelia Res., HHMI Josh Tenenbaum, MIT Nao Uchida, Harvard University Greg Wayne, DeepMind

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[jobs] Phd opportunity in Lille, France - Spiking Neural Networks for Video Analysis
by Ioan Marius BILASCO 17 Feb '22

17 Feb '22

The FOX team from the CRIStAL laboratory (UMR CNRS), Lille France is looking to recruit a PhD student starting as soon as possible on the following subject : Spiking Neural Networks for Video Analysis The FOX research group is part of the CRIStAL laboratory (University of Lille, CNRS), located in Lille, France. We focus on video analysis for human behavior understanding. Specifically, we develop spatio-temporal models of motions for tasks such as abnormal event detection, emotion recognition, and face alignment. We are also involved in IRCICA (CNRS), a research institute promoting multidisciplanary research. At IRCICA, we collaborate with computer scientists and experts in electronics engineering to create new models of neural networks that can be implemented on low-power hardware architectures. Recently, we designed state-of-the-art models for image recognition with single and multi-layer unsupervised spiking neural networks. We were among the first to succesfully apply unsupervised SNNs on modern datasets of computer vision. We also developed our own SNN simulator to support experiments with SNN on computer vision problems. Our work is published in major journals (Pattern Recognition, IEEE Trans. on Affective Computing) and conferences (WACV, IJCNN) in the field. Abstract: Spiking Neural Network have recently been evaluated on classical image recognition tasks [1]. This work has highlighted their promising performances in this domain and have identified ways to improve them to be competitive with comparable deep learning approaches. In particular, it demonstrated the ability of SNN architectures to learn relevant patterns for static pattern recognition in an unsupervised manner. However, dealing with static images is not enough, and the computer vision community is increasingly interested in video analysis, for two reasons. First, video data is more and more common and corresponds to a wide range of applications (video surveillance, audio-visual productions, autonomous vehicles...). Second, this data is richer than isolated static images, and thus offers the possibility to develop more effective systems, e.g. using motion information. Thus, it is recognized in the community that modeling motion in videos is more relevant than studying visual appearance alone for tasks such as action or emotion recognition. The next step for SNNs is therefore to study their ability to model motion rather than, or in addition to, image appearance. The goal of the Ph.D. candidate will be to explore the use of SNNs for space-time modeling in videos. This work will be targeted towards applications in human behavior understanding and especially action recognition. More specifically, the Ph.D. candidate is expected to: * identify what issues may prevent space-time modeling with SNNs and how they can be circumvented; * propose new supervised and unsupervised SNN models for motion modeling, which are compatible with hardware implementations on ultra-low power devices; * evaluate the proposed models on standard datasets for video analysis. Detailed subject: https://bit.ly/stssnnfox <https://bit.ly/stssnnfox> Candidates must hold a Master degree (or an equivalent degree) in Computer Science, Statistics, Applied Mathematics or a related field. Experience in one or more of the following is a plus: • image processing, computer vision; • machine learning; • bio-inspired computing; • research methodology (literature review, experimentation…). Candidates should have the following skills: • good proficiency in English, both spoken and written; • scientific writing; • programming (experience in C++ is a plus, but not mandatory). This PHD thesis will be funded in the framework of the ANVI-Luxant industrial chair. The general objective of the Chair is to make a scientific and technological progress in the mastery of emerging information processing architectures such as neuromorphic architectures as an embedded artificial intelligence technique. The use-case studies will come from video protection in the context of retail and transportation. The candidate will be funded for 3 years; he/she is expected to defend his/her thesis and graduate by the end of the contract. The monthly gross salary is around 2000€, including benefits (health insurance, retirement fund, and paid vacations). The position is located in Lille, France. With over 110 000 students, the metropolitan area of Lille is one France's top education student cities. The European Doctoral College Lille Nord-Pas de Calais is headquartered in Lille Metropole and includes 3,000 PhD Doctorate students supported by university research laboratories. Lille has a convenient location in the European high-speed rail network. It lies on the Eurostar line to London (1:20 hour journey). The French TGV network also puts it only 1 hour from Paris, 35 mn from Brussels, and a short trips to other major centres in France such as Paris, Marseille and Lyon. For application, please send the following information in a single PDF file to Dr. Marius Bilasco (marius.bilasco(a)univ-lille.fr <mailto:marius.bilasco@univ-lille.fr>) with subject [PhD_Luxant-ANVI]: * A cover letter. * A curriculum vitae, including a list of publications, if any. * Transcripts of grades of Master's degree. * The contact information of two references (and any letters if available). We look forward to receiving your application as soon as possible, but no later than 26.3.2022

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[jobs] PhD opportunity - Spatio-temporal augmentation models for motion pattern learning - AI_PhD@Lille, France
by Ioan Marius BILASCO 17 Feb '22

17 Feb '22

The FOX team from the CRIStAL laboratory (UMR CNRS), Lille France is looking to recruit a PhD student starting on October 1st 2022 on the following subject : Spatio-temporal data augmentation models for motion pattern learning using deep learning: applications to facial analysis in the wild The FOX research group is part of the CRIStAL laboratory (University of Lille, CNRS), located in Lille, France. We focus on video analysis for human behavior understanding. Specifically, we develop spatio-temporal models of motions for tasks such as abnormal event detection, emotion recognition, and face alignment. Our work is published in major journals (Pattern Recognition, IEEE Trans. on Affective Computing) and conferences (WACV, IJCNN). Abstract: Facial expression analysis is a well-studied field when dealing with segmented and constrained data captured in lab conditions. However, many challenges must still be addressed for building in-the-wild solutions that account for various motion intensities, strong head movements during expressions, the spotting of the subsequence containing the expression, partially occluded faces, etc. In recent years, learned features based on deep learning architectures were proposed in order to deal with these challenges. Deep learning is characterized by neural architectures that depend on a huge number of parameters. The convergence of these neural networks and the estimation of optimal parameters require large amounts of training data, especially when dealing with spatio-temporal data, particulary adequate for facial expression recognition. The quantity, but also the quality, of the data and its capacity to reflect the addressed challenges are key elements for training properly the networks. Augmenting the data artificially in an intelligent and controlled way is an interesting solution. The augmentation techniques identified in the literature are mainly focused on image augmentation and consist of scaling, rotation, and flipping operations, or they make use of more complex adversarial training. These techniques can be applied at the frame level, but there is a need for sequence level augmentation in order to better control the augmentation process and ensure the absence of temporal artifacts that might bias the learning process. The generation of dynamic frontal facial expressions has already been addressed in the literature. The goal of this Ph.D. is to conceive new space-time augmentation methods for unconstrained facial analysis (involving head movements, occultations, etc.). Attention should be paid in assessing the quality standards related to facial expression requirements: stability over time, absence of facial artifacts, etc. More specifically, the Ph.D. can didate is expected to conceive augmentation architectures that address various challenges (motion intensities, head movements) while maintaining temporal stability and eliminating facial artifacts. More details are available here : https://bit.ly/staugm_motion <http://bit.ly/st_augm_motion> Candidates must hold a Master degree in Computer Science, Statistics, Applied Mathematics or a related field. Experience in one or more of the following is a plus: • image processing, computer vision; • machine learning; • research methodology (literature review, experimentation…). Candidates should have the following skills: • good proficiency in English, both spoken and written; • scientific writing; • programming (experience in C++ is a plus, but not mandatory). This PHD thesis will be funded in the framework of the AI_PhD@Lilleprogram. http://www.isite-ulne.fr/index.php/en/phd-in-artificial-intelligence/ <http://www.isite-ulne.fr/index.php/en/phd-in-artificial-intelligence/> The candidate will be funded for 3 years; he/she is expected to defend his/her thesis and graduate by the end of the contract. The monthly gross salary is around 2000€, including benefits (health insurance, retirement fund, and paid vacations). Additional financial support is expected in the framework of the AI_PhD@Lille program. The position is located in Lille, France. With over 110 000 students, the metropolitan area of Lille is one France's top education student cities. The European Doctoral College Lille Nord-Pas de Calais is headquartered in Lille Metropole and includes 3,000 PhD Doctorate students supported by university research laboratories. Lille has a convenient location in the European high-speed rail network. It lies on the Eurostar line to London (1:20 hour journey). The French TGV network also puts it only 1 hour from Paris, 35 mn from Brussels, and a short trips to other major centres in France such as Paris, Marseille and Lyon. We look forward to receiving your application as soon as possible, but no later than 26.03.2021.

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job: staff scientist/team leader at NIMH
by Francisco Pereira 17 Feb '22

17 Feb '22

The National Institute of Mental Health (NIMH), National Institutes of Health (NIH), Department of Health and Human Services (DHHS), is recruiting for a Staff Scientist/Team Leader position to direct the Scientific and Statistical Computing Core/AFNI Team (https://afni.nimh.nih.gov).The primary function of this group is to support multimodal neuroimaging research in the intramural research program (IRP) at NIH. This includes (i) applying, extending, and developing new and existing software tools and techniques to conduct pioneering analyses on a diverse array of neuroimaging modalities (e.g. MRI, DTI, fMRI, MEG, PET, and EEG), (ii) advising and training IRP researchers on neuroimaging analysis methods, and (iii) leading the future growth and development of the AFNI code base ( https://github.com/afni/afni) Primary responsibilities of the Team Leader will include serving as a partner in and facilitator of neuroimaging research within the NIMH IRP; providing guidance on study design; and ensuring that appropriate standards of quality, rigor, and transparency are maintained. They will also act in coordination with the leaders of the Data Science and Sharing ( https://cmn.nimh.nih.gov/dsst) and Machine Learning Teams ( https://cmn.nimh.nih.gov/mlt) Finally, they will be responsible for management and supervision of approximately 9 full time staff members including software engineers, statisticians, and other biomedical science professionals. The successful candidate must be committed to scientific excellence and highly collaborative research, ensuring an immense impact on the fields of brain imaging and mental health research. Candidates must have earned a Ph.D. or M.D. and demonstrate experience as an outstanding scientist. Applicants must possess the ability to analyze, prioritize, and delegate resources while managing multiple projects. Expertise and experience should include demonstration of positive and collegial interactions with staff at all levels and the ability to communicate and promote their research, software, and scholarly contributions. Applicants should also have knowledge and experience in software engineering, including writing, distributing, maintaining, and supporting scientific software for a large user base while adhering to community recognized standards and practices. Please see the official posting https://cmn.nimh.nih.gov/compcore-job for more details, including instructions on how to apply.

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new Open Access Perspective
by Daniel Gardner 17 Feb '22

17 Feb '22

What do brains compute, and how do they do it? Has evolution conserved a small canonical set of computations performed by neural circuitry? In a just-published invited Perspective for the Journal of Computational Neuroscience, I present arguments for (and against) these fundamental questions. The title, Where are the cores in this thing? …and what are they computing? (with apologies to Larry Abbott) is of course an homage to Larry's 'Where are the switches on this thing?' It's Open Access and freely downloadable (tell your students and friends) at: https://link.springer.com/content/pdf/10.1007/s10827-021-00809-1.pdf The very first sentence is: "Evolution conserves neural components and connectivity—does this extend to computations and circuitry?" I go on to note that independent of specific microcircuit connectivity, some key neuronal and network properties, conserved across all nervous systems, may be essential for computation. Candidates include irregular firing, stochastic plastic synapses, alternate A/D PSPs/spikes, nonlinear f-I, cellular longevity, dynamic but stable networks with both fixed and adaptive features, and local processing linked by distant connectivity for coherence and modulation. Collegially, I invite discussion. I also urge neuroscientists to add these questions to those that guide their own research, and I offer community efforts to widen the scope. ...Daniel Gardner, Ph.D. dan(a)med.cornell.edu dg458(a)columbia.edu Head, Laboratory of Neuroinformatics Professor Physiology & Biophysics/Neurology/Neuroscience Weill Medical College of Cornell University lab: (212) 746-6373 cell: (917) 902-0654

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NEST Conference 2022 - registration is open
by Hans Ekkehard Plesser 17 Feb '22

17 Feb '22

Dear Colleagues, The NEST Initiative is excited to invite everyone interested in Neural Simulation Technology and the NEST Simulator to the NEST Conference 2022. The NEST Conference provides an opportunity for the NEST Community to meet, exchange success stories, swap advice, learn about current developments in and around NEST spiking network simulation and its application. We particularly encourage young scientists to participate in the conference! This year's conference will again take place as a virtual event on Thursday/Friday 23/24 June 2022. Register now! For more information please visit the conference website https://nest-simulator.org/conference We are looking forward to seeing you all in June! Hans Ekkehard Plesser and colleagues -- Prof. Dr. Hans Ekkehard Plesser Head, Department of Data Science Faculty of Science and Technology Norwegian University of Life Sciences PO Box 5003, 1432 Aas, Norway Phone +47 6723 1560 Email hans.ekkehard.plesser(a)nmbu.no<mailto:hans.ekkehard.plesser@nmbu.no> Home http://arken.nmbu.no/~plesser

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Postdoctoral Researcher in Medical Interactive Technologies
by Mastaneh Torkamani 17 Feb '22

17 Feb '22

The University of Eastern Finland is inviting applications for a Postdoctoral Researcher position in Medical Interactive Technologies on the Joensuu Campus. The position will be filled for a 2-year term from 1.3.2022 (or as agreed). Please find more information below and submit your application no later than 25.2.2022. We are looking for a highly motivated and self-driven Postdoctoral Researcher to work full-time on an interdisciplinary research project funded by the Academy of Finland: "Next generation sensory monitoring for improving microsurgical skills and performance" led by Associate Professor Roman Bednarik (https://www.uef.fi/en/web/int) As our new Postdoctoral Researcher in Medical Interactive Technologies, you will be working in the School of Computing at the Faculty of Science and Forestry, Joensuu. The project is in collaboration with Kuopio University Hospital, Department of Neurosurgery and Microsurgery Training Center, https://www.microsurgerycenter.com/. The research will focus on deep understanding of sensorimotor perception and action in image-guided surgeries. A large part of the research evolves around the visual and tactile perception that underlies surgeon’s high-level skills, i.e. eye-hand coordination, action planning, and decision making. Situated in bimanual surgical tasks, our research combines human factors, human-robot interaction, computational modeling, machine learning, and computer vision for intelligent skill monitoring and interaction with robotic assistance in surgical procedures. For more information, please see the job advert at https://rekry.saima.fi/certiahome/open_job_view.html?did=5600&jc=16&id=0000… Please submit your application by using our electronic application form no later than 25.2.2022 (by 24.00 hours Finnish time). For further information on the position, please contact associate Professor Roman Bednarik, e-mail roman.bednarik(a)uef.fi, tel. +358 29 4453621 For further information on the application procedure, please contact HR-secretary Noora Hämäläinen, e-mail noora.hamalainen(a)uef.fi, tel. +358 29 4458 302 Best regards, Mastaneh Torkamani Azar, Ph.D. Postdoctoral Researcher Interactive Technologies Research Group School of Computing University of Eastern Finland Email: mastaneh.torkamani(a)uef.fi https://sites.uef.fi/int/

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Postdoc position at UTSA
by Fidel Santamaria 16 Feb '22

16 Feb '22

As part of a collaboration with the AFRL, the laboratory of Dr Santamaria at UTSA is looking for a talented postdoc to computationally study how fast thermal gradients impact synaptic mechanisms in dendritic spines. This will be part of a collaborative project between UTSA, AFRL, and other universities where experiments and simulations will combine to understand fundamental plasticity processes in neuronal synapses. The results will have important practical implications in neuroscience and biomedical engineering. The selected person will work on developing deterministic and stochastic models of how biochemical signals, involved in synaptic plasticity, are affected by thermal gradients. Interested individuals should send a CV and cover letter to Dr. Santamaria (fidel.santamaria(a)utsa.edu) The position is for one year, with the possibility of renewal. This position is only open to American citizens. Applicants must have experience with Python or Matlab and a background in physics or engineering is preferred. _______________________________________________________________________________ Fidel Santamaria, PhD Professor Department of Neuroscience, Development, and Regenerative Biology University of Texas at San Antonio www.utsa.edu/SantamariaLab<http://www.utsa.edu/SantamariaLab> Office: BSB 1.03.30 Tel +1(210) 458 6910

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Special issue of SIAP on the life sciences
by Kresimir josic 14 Feb '22

14 Feb '22

SIAM Journal on Applied Mathematics (SIAP) invites contributions for a special section on the life sciences to highlight the use and development of mathematical models and analysis tools to address life sciences issues that are of true biological, medical, or industrial relevance. Papers submitted to this special section will be peer-reviewed, subject to the review criteria of SIAP. Papers will initially be handled by guest editors. The window for submissions runs from February 15 to June 30, 2022. For information about this issue please see: https://bit.ly/3LsPxcw <https://bit.ly/3LsPxcw>

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Third session of the Brains Through Time Reading Club
by manuel molano 14 Feb '22

14 Feb '22

Dear all, I would like to bring to your attention the third session of the Brains Through Time Reading Club<https://sites.google.com/view/bbtreadingclub/home>! It will be on February 23rd (4pm CEST / 10 EST) and will include the participation of Leonard Maler<https://www.uottawa.ca/brain/people/maler-leonard>, Idoia Quintana-Urzainqui<https://twitter.com/idoiaeu>, Luis Puelles<https://scholar.google.com/citations?user=nIoLKVAAAAAJ&hl=en> and Paul Cisek<https://cisek.org/pavel/>. We will discuss the main ideas of the third chapter of the book: The origin of jaws and paired fins. You can register HERE<https://www.crowdcast.io/e/brains-through-time-3>. And in case you missed the previous sessions, you can watch them HERE<https://www.youtube.com/channel/UCDWFS3MBL9OhmpmL6mFmxsg/featured>.

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Computational Neuroscience Summer school in South Africa, DEADLINE TOMORROW
by Tim Vogels 14 Feb '22

14 Feb '22

Dear all, This is a reminder that the application DEADLINE for the next IMBIZO is TOMORROW. If you, or anyone you know who would benefit from this opportunity please consider applying: IBRO-SIMONS COMPUTATIONAL NEUROSCIENCE IMBIZO #isiCNI2022 12 August - 4 September 2022, Noordhoek Beach, Cape Town, South Africa http://imbizo.africa/ <http://imbizo.africa/> Application deadline: 15th February 2022 The #isiCNI2022 is a southern hemisphere summer school aiming to promote computational neuroscience in Africa. It will bring together international and local students under the tutelage of the world's leading experts in the field. Like its international sister courses, this four-week summer school aims to teach central ideas, methods, and practices of modern computational neuroscience through a combination of lectures and hands-on project work. Mornings will be devoted to lectures on topics across the breadth of computational neuroscience, including experimental underpinnings and machine learning analogues. The rest of the day will be spent working on research projects under the close supervision of expert tutors and faculty. Individual research projects will focus on the modelling of neurons, neural systems, behaviour, the analysis of state-of-the-art neural data, and the development of theories to explain experimental observations. New this year is a week focused on neuroscience-inspired machine learning! Who should apply? This course is aimed at Masters and early-PhD level students though Honours or advanced undergraduates may also apply. Postdoctoral students who can motivate why the course would benefit them are also encouraged to apply, Students should have sufficient quantitative skills, (e.g. a background in mathematics, physics, computer science, statistics, engineering or related field). Some knowledge of neural biology will be useful but not essential. Experimental neuroscience students are encouraged to apply, but should ensure that they have a reasonable level of quantitative proficiency (i.e. at least second-year level mathematics or statistics and have done at least one course in computer programming). Please distribute this information as widely as you can. Essential details * Fee (which covers tuition, lodging, and meals): 1100 EUR Thanks to our generous sponsors, significant financial assistance is available to reduce and waiver fees for students, particularly for African applicants. We also hope to provide some travel bursaries for international students. If you are in need of financial assistance to attend the Imbizo, please state so clearly in the relevant section of your application. The Imbizo is planned to be hosted in person, with everyone following our COVID policy <https://imbizo.africa/covid-policy/>. If it is unsafe to hold the summer school, we will follow up with further information at the appropriate time. * Application deadline: 15th February 2022 * Notification of results: late April 2022 Information and application https://imbizo.africa/ <https://imbizo.africa/> Questions? isicn.imbizo(a)gmail.com <mailto:isicn.imbizo@gmail.com> What is an Imbizo? \ɪmˈbiːzɒ\ | Xhosa - Zulu A gathering of the people to share knowledge. FACULTY Demba Ba - Harvard University Adrienne Fairhall - University of Washington Peter Latham - University College London Daphne Bavelier - University of Geneva Timothy Lillicrap - DeepMind Jonathan Pillow - Princeton University Joseph Raimondo - University of Cape Town Mackenzie Mathis - EPFL Lausanne Athanassia Papoutsi - IMBB-FORTH Evan Schaffer - Columbia University Henning Sprekeler - Technical University of Berlin Thomas Tagoe - University of Ghana Tim Vogels - Institute of Science and Technology Austria Blake Richards - McGill University Alex Pouget - University of Geneva TUTORS Mohamed Abdelhack - Krembil Centre for Neuroinformatics Annik Carson - McGill University Spiros Chavlis - IMBB-FORTH Christopher Currin - Institute of Science and Technology Austria Sanjukta Krishnaopal - University College London Marjorie Xie - Columbia University ORGANISERS Demba Ba (Harvard University) Christopher Currin (Institute of Science and Technology Austria) Peter Latham (Gatsby Unit for Computational Neuroscience) Joseph Raimondo (University of Cape Town) Emma Vaughan (Imbizo Logistics) Tim Vogels (Institute of Science and Technology Austria) Sponsors The isiCNI is made possible by the generous support from the Simons Foundation <https://www.simonsfoundation.org/> and the International Brain Research Organisation (IBRO) <https://ibro.org/>, as well as the Wellcome Trust <https://wellcome.org/>, Deep Mind <https://deepmind.com/> and Wits University <https://www.wits.ac.za/> Organizational Affiliates University of Cape Town, University College London, Institute of Science and Technology Austria, TReND in Africa <http://trendinafrica.org/>, Neuroscience Institute <http://www.neuroscience.uct.ac.za/>, Gatsby Foundation <http://www.gatsby.org.uk/>, IBRO African Center for Advanced Training in Neurosciences at UCT

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[Jobs] Available Position: Professor in Artificial Intelligence (AI) at the University of Plymouth, UK
by Amir Aly 12 Feb '22

12 Feb '22

Dear All, *Apologies for cross-posting* *The School of Engineering, Computing, and Mathematics (SECaM)*, at the University of Plymouth has a unique opportunity for an outstanding academic and their team to join the School and strengthen our research, leadership, and collaboration in *Artificial Intelligence*. This is an opportunity to establish senior academic direction and growth in this core area of Artificial Intelligence and to build on multi-disciplinary collaboration, supporting the School’s strategic objectives to create a critical mass of expertise in the area of Artificial Intelligence aligning directly with Industry 4.0 and future national and international research opportunities and skills development needs. You will work together with colleagues to create a vision for our existing Centre for Robotics and Neural Systems (CRNS), which builds on the world-leading and international excellence performance in the field of computer science, social and cognitive robotics, neural computation, and others. You will join a community of over 100 staff and 2000 students who work alongside one another in world-leading facilities. This synergistic mix of academic disciplines has research strength aligned with challenges of the fourth Industrial Revolution, clean growth, digitalization, autonomy, and health technology, helping to develop pioneering, innovative solutions to real-world problems that have a genuinely positive impact upon society. The deadline is 25th February. For more information and to apply, please visit: https://hrservices.plymouth.ac.uk/tlive_webrecruitment/wrd/run/ETREC107GF.o… <https://eur03.safelinks.protection.outlook.com/?url=https%3A%2F%2Fhrservice…> Regards ---------------- *Dr. Amir Aly* Lecturer in Artificial Intelligence and Robotics Center for Robotics and Neural Systems (CRNS) School of Engineering, Computing, and Mathematics Room B332, Portland Square, Drake Circus, PL4 8AA University of Plymouth, UK

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