- Comp-neuro - lists.cnsorg.org

Re: [Comp-neuro] New computational neuroscience paper on human postural control system in PLoS Comput Biol.
by André Fabio Kohn 12 Feb '15

12 Feb '15

Mesoscale neural model of human spinal cord, muscle receptors, muscle dynamics and standing control biomechanics. This recently published paper starts from neuronal ionic channels to model spinal cord neurons and ends at studying human postural control during quiet stance. It represents a closed loop system, with feedback achieved through appropriate muscle spindle and Golgi tendon organ models. It is a mesoscale model and it was successfully validated both at the individual level and the overall behavior level. Spinal cord neurons (motoneurons and excitatory and inhibitory interneurons) are modeled based on ionic channel dynamics, synapses have dynamic properties, afferent and efferent axons introduce delays, muscles and tendons are modeled based on human data, appropriate models of muscle spindles and Golgi tendon organs provide sensory feedback to the spinal cord. Brain commands on the spinal cord are modeled through Gamma point processes with appropriate parameters. >From an overall theoretical view, the system is composed of nonlinear elements, it is stochastic and has delays and is described by approximately 5000 differential equations. Among its many new results, one is that a mixture of intermittent and continuous motor control may arise from the overall dynamics of the closed loop system, without influence from the brain. Elias, L.A., Watanabe, R.N. Kohn, A.F., 2014 (November). Spinal Mechanisms May Provide a Combination of Intermittent and Continuous Control of Human Posture: Predictions from a Biologically Based Neuromusculoskeletal Model http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.10039… Andre Fabio Kohn, Ph.D. Professor of Biomedical Engineering and Neuroscience University of Sao Paulo, Brazil www.leb.usp.br 2015-01-30 18:36 GMT-02:00 André Fabio Kohn <andfkohn(a)gmail.com>: > This recently published paper starts from neuronal ionic channels to model > spinal cord neurons and ends at studying human postural control during > quiet stance. It represents a closed loop system, with feedback achieved > through appropriate muscle spindle and Golgi tendon organ models. It is a > mesoscale model and it was successfully validated both at the individual > level and the overall behavior level. Spinal cord neurons (motoneurons and > excitatory and inhibitory interneurons) are modeled based on ionic channel > dynamics, synapses have dynamic properties, afferent and efferent axons > introduce delays, muscles and tendons are modeled based on human data, > appropriate models of muscle spindles and Golgi tendon organs provide > sensory feedback to the spinal cord. Brain commands on the spinal cord are > modeled through Gamma point processes with appropriate parameters. > > From an overall theoretical view, the system is composed of nonlinear > elements, it is stochastic and has delays and is described by approximately > 5000 differential equations. > > Among its many new results, one is that a mixture of intermittent and > continuous motor control may arise from the overall dynamics of the closed > loop system, without influence from the brain. > > > > Elias, L.A., Watanabe, R.N. Kohn, A.F., 2014 (November). Spinal Mechanisms > May Provide a Combination of Intermittent and Continuous Control of Human > Posture: Predictions from a Biologically Based Neuromusculoskeletal Model > > > http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.10039… > > > > Andre Fabio Kohn, Ph.D. > > Professor of Biomedical Engineering and Neuroscience > > University of Sao Paulo, Brazil > > www.leb.usp.br >

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Reminder - Feb. 15 Application Deadline for 2015 Summer School on Large-Scale Brain Modelling
by Peter Blouw 12 Feb '15

12 Feb '15

[All details about this school can be found online at http://www.nengo.ca/summerschool] The Centre for Theoretical Neuroscience at the University of Waterloo is inviting applications for our 2nd annual summer school on large-scale brain modelling. This two-week school will teach participants how to use the Nengo simulation package to build state-of-the-art cognitive and neural models. Nengo has been used to build what is currently the world's largest functional brain model, Spaun <http://www.nengo.ca/build-a-brain/spaunvideos> [1], and provides users with a versatile and powerful environment for simulating cognitive and neural systems. We welcome applications from all interested graduate students, research associates, postdocs, professors, and industry professionals. No specific training in the use of modelling software is required, but we encourage applications from active researchers with a relevant background in psychology, neuroscience, cognitive science, engineering, computer science, or a related field. For a look at last year's summer school, please see this short video: http://goo.gl/BXJ3x5 [1] Eliasmith, C., Stewart T. C., Choo X., Bekolay T., DeWolf T., Tang Y., Rasmussen, D. (2012). A large-scale model of the functioning brain. Science. Vol. 338 no. 6111 pp. 1202-1205. DOI: 10.1126/science.1225266. [ http://nengo.ca/publications/spaunsciencepaper] ***Application Deadline: February 15, 2015*** Format Participants are encouraged to bring their own ideas for projects, which may focus on testing hypotheses, modelling neural or cognitive data, implementing specific behavioural functions with neurons, expanding past models, or provide a proof-of-concept of various neural mechanisms. More generally, participants will have the opportunity to: - build perceptual, motor, and cognitive models with spiking neurons - model anatomical, electrophysiological, cognitive, and behavioural data - use a variety of single cell models within a large-scale model - integrate machine learning methods into biologically oriented models - use Nengo with your favorite simulator, e.g. Brian, NEST, Neuron, etc. - interface Nengo with various kinds of neuromorphic hardware - interface Nengo with cameras and robotic systems - implement modern nonlinear control methods in neural models - and much more… Hands-on tutorials, work on individual or group projects, and talks from invited faculty members will make up the bulk of day-to-day activities. There will be a weekend break on June 13-14, and fun activities scheduled for evenings throughout. A project demonstration event will be held on the last day of the school, with prizes for strong projects! Date and Location: June 7th to June 19th, 2015 at the University of Waterloo, Ontario, Canada. Applications: Please visit http://www.nengo.ca/summerschool, where you can find more information regarding costs, travel, lodging, along with an application form listing required materials. If you have any questions about the school or the application process, please contact Peter Blouw (pblouw(a)uwaterloo.ca)

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Announcing Allen/UW Summer Workshop on the Dynamic Brain 2015
by Adrienne Fairhall 12 Feb '15

12 Feb '15

Applications are now open for the second Allen Institute for Brain Science/UW Summer Workshop on the Dynamic Brain. Directed by Christof Koch and Adrienne Fairhall, this course takes place on beautiful San Juan Island, WA, from Aug 23-Sept 6. The course features lectures in basics of experimental and theoretical neurobiology along with practical sessions on coding, big data, modeling and the use of the Allen Institute tools for neuroanatomical exploration and model development. Students will also have access to new high-throughput data sets collected by the Institute in the past year with which to carry out an independent project. Deadline April 1. For details and link to application, see one of: http://alleninstitute.org/summerworkshop http://courses.washington.edu/braindyn/

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New Book: Information Theory
by Jim Stone 11 Feb '15

11 Feb '15

I'd like to announce the publication of this book: Information Theory: A Tutorial Introduction by JV Stone Reviews, synopsis, and table of contents can be found here: http://jim-stone.staff.shef.ac.uk/BookInfoTheory/InfoTheoryBookMain.html Note that the examples explored in the final chapter are especially relevant to computational neuroscience and biology. regards, Dr Jim Stone University of Sheffield, UK. http://www.jim-stone.staff.shef.ac.uk/

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Postdoctoral position at Group for Neural Theory, Paris
by Srdjan Ostojic 11 Feb '15

11 Feb '15

A postdoctoral position is available in Srdjan Ostojic’s team at the Group Neural Theory, Paris, France (see http://iec-lnc.ens.fr/group-for-neural-theory/) to investigate dynamics and computations in spiking neural networks, combining theoretical approaches, simulations and analysis of neurophysiological datasets. The Group for Neural Theory is a highly interactive and dynamic environment situated in central Paris, and embedded within the strong Parisian theoretical neuroscience community. The ideal candidate should have a strong quantitative background, e.g. in computational neuroscience, physics, applied maths, computer science. Previous experience in neuroscience is preferred but not required. Starting dates are flexible. The position is for two years, with a possible extension for a third year. Candidates should send a letter of motivation (2 pages max), the contact information of 2 to 3 referees and their CVs to srdjan.ostojic at ens.fr *BEFORE March 20th, 2015*. I will be available at Cosyne for informal inquiries. Srdjan Ostojic Group for Neural Theory Ecole Normale Superieure Paris 29, rue d'Ulm 75005 Paris, France

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Open PhD position in MEG/EEG research at Research Center Juelich, Germany
by Martina Reske 11 Feb '15

11 Feb '15

We have an open PhD student position in our collaborative project entitled “From spike trains to whole-brain dynamics – Bottom-up and top-down processing during active vision” to fill. This project addresses the question how visual input is processed in extremely short time cycles of fixations and saccades through interaction of various cortical areas. MEG recordings from human subjects performing free viewing tasks will allow for the simultaneous observation of neuronal activities from different cortical areas during active vision. Analysis of subjects’ performance and brain activity on these visual tasks enables us to study the information flow through various cortical areas, and to identify top-down components interacting with bottom-up processes. What we expect from you: * We seek for a highly motivated candidate with curiosity and persistence * A preferable candidate will have background and strong Master degree in physics, neuroscience, electrophysiology, biology, computer science or a closely related field of natural science, preferably in the field of MEG/EEG biophysics, data acquisition and analysis, biostatistics, MEG/EEG biophysics or signal processing * Obligatory: excellent educational records in the related field, good programming and data processing skills, time series analysis and M/EEG source estimation * Substantial expertise in scientific programming (preferable languages: Python, C, C++ ) and substantial knowledge of Linux and Windows * Strong motivation to carry out neuroimaging studies utilizing MEG and to perform source and connectivity analysis * Beneficial: basic knowledge of neuroscience concepts * Ability and willingness to work independently and proactively * Confident appearance and ability to work cooperatively in an interdisciplinary environment * Good interpersonal and communication skills, structured and systematic working style * Fluent in English (spoken and written); beneficial: knowledge of German The candidate will primarily be based at the Jülich Research Center. What we offer: We offer a position in a creative and international team, themes ranging from computational neuroscience, simulation technology and multimodal imaging, see www.csn.fz-juelich.de<http://www.csn.fz-juelich.de> and http://www.fz-juelich.de/inm/inm-4/EN/Forschung/MEG-Physik/_node.html. The Jülich Research Center is one of the largest research centers in Germany, with excellent scientific equipment, located on a green campus, and near the cultural centers Köln, Düsseldorf, and Aachen. The PhD position is available for 3 years. Applications, including a letter clearly motivating your application, CV, publication list, copies of university certificates, and one reference letter should be sent as a single PDF email attachment (max. 10MB) mentioning the internal reference code CSC-GID latest until March 31st , 2015, to should be sent to: Dr. Martina Reske (m.reske(a)fz-juelich.de<mailto:m.reske@fz-juelich.de>) – Scientific Coordinator. Project leaders will be: Prof. Dr. Sonja Grün (INM-6/IAS-6), Dr. Junji Ito (INM-6/IAS-6), Dr. Jürgen Dammers (INM-4) Institute of Neuroscience and Medicine (INM-6, INM-4), Institute for Advanced Simulation (IAS-6), Jülich Research Center and JARA52425 Jülich, Germany, www.csn.fz-juelich.de<http://www.csn.fz-juelich.de> -- Dr. Martina Reske Scientific Coordinator Institute of Neuroscience and Medicine (INM-6) Computational and Systems Neuroscience & Institute for Advanced Simulation (IAS-6) Theoretical Neuroscience Jülich Research Centre and JARA Jülich, Germany Work +49.2461.611916 Work Cell +49.151.26156918 Fax +49.2461.619460 www.csn.fz-juelich.de<http://www.csn.fz-juelich.de> ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Juelich GmbH 52425 Juelich Sitz der Gesellschaft: Juelich Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Dr. Karl Eugen Huthmacher Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender), Karsten Beneke (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt, Prof. Dr. Sebastian M. Schmidt ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------

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Ikerbasque Research Fellow ("Tenure"). Methods in Neuroimaging, Bilbao (Spain)
by Jesus Cortes 11 Feb '15

11 Feb '15

Dear researcher, One position for "Ikerbasque Research Fellow" will be host by the new emerging group of Computational Neuroimaging in Biocruces. http://www.biocruces.com/web/biocruces/bc5.08 More information about the position, "Ikerbasque Research Fellow" at http://www.ikerbasque.net/fellows More information about Biocruces http://www.biocruces.com/ Interested researchers must contact me before April 1, 2015. Feel free in contacting me for any further question or comment. Provide a copy of an updated CV remarking best 5 publications. Prof. Jesus M Cortes Ikerbasque Research Professor Head of the Computational Neuroimaging Lab Biocruces Health Research Institute

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Introductory Workshop on Computational Methods in Neuroscience, June 10 – 19, 2015
by Artur Luczak 11 Feb '15

11 Feb '15

Campus Alberta Neuroscience is pleased to announce the second annual Introductory Workshop on Computational Methods in Neuroscience. This ten-day workshop is comprised of lectures and hands-on Matlab exercises to introduce students to neuronal data analysis methods. Workshop is aimed for graduate students with little priory experience in quantitative methods who wants to learn Matlab and its application for data analyses. Most costs – including registration fees, travel to Lethbridge, accommodation, and most meals – will be covered for Alberta trainees. Individuals from outside of Alberta are encouraged to apply, but must cover their own costs. These costs are estimated to be around $1300 (excluding travel). Registration for the workshop is now open – complete applications must be received by March 10, 2015 at albertaneuro(a)uleth.ca . Workshop will take place at University of Lethbridge, Alberta, Canada, June 10 – 19, 2015. Course Director is Dr. Bruce McNaughton and course instructors include Drs David Euston, Aaron Gruber, Artur Luczak, Masami Tatsuno and Majid Mohajerani. Further information and application details are available at: www.albertaneuro.ca/workshop Cheers, Artur ------------------------------------------------ Artur Luczak, Ph.D., Assoc. Professor Canadian Centre for Behavioural Neuroscience Department of Neuroscience, University of Lethbridge 4401 University Drive, Lethbridge, AB, T1K 3M4, Canada tel.: (403) 394-3974; fax: (403) 329-2775 http://lethbridgebraindynamics.com/artur_luczak

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Berkeley course in mining and modeling neuroscience data, July 6-17, 2015
by Jeff Teeters 10 Feb '15

10 Feb '15

Call for applications: We invite applicants to the 2015 summer course in "Mining and modeling of neuroscience data" to be held July 6-17 at UC Berkeley. A description of the course is below and also at: http://crcns.org/course Application deadline is April 6 (or March 1, for MSRI's sponsored students). ----- Berkeley summer course in mining and modeling of neuroscience data July 6-17, 2015 Redwood Center for Theoretical Neuroscience, UC Berkeley Organizers: Fritz Sommer, Bruno Olshausen, Jeff Teeters (HWNI, UC Berkeley); Christos Papadimitriou (Simons Institute, Berkeley); Ingrid Daubechies (MSRI, Duke). Scope This course is for students and researchers with backgrounds in mathematics and computational sciences who are interested in applying their skills toward problems in neuroscience. It will introduce the major open questions of neuroscience and teach state-of–the-art techniques for analyzing and modeling neuroscience data sets. The course is designed for students at the graduate level and researchers with background in a quantitative field such as engineering, mathematics, physics or computer science who may or may not have a specific neuroscience background. The goal of this summer course is to help researchers find new exciting research areas and at the same time to strengthen quantitative expertise in the field of neuroscience. The course is sponsored by the National Science Foundation from a grant supporting activities at the data sharing repository CRCNS.org, the Helen Wills Neuroscience Institute, the Simons Institute for the Theory of Computing and the Mathematical Science Research Institute. Format The course is “hands on” in that it will include exercises in how to use and modify existing software tools and apply them to data sets, such as those available in the CRCNS.org repository. Course Instructors Vitaly Feldman, IBM Almaden Research Center Sonja Grün, Juelich Research Center, Germany Robert Kass, Carnegie Mellon University, Pittsburgh Maneesh Sahani, Gatsby Unit, University College London Odelia Schwartz, University of Miami Eric Shea-Brown, University of Washington Frederic Theunissen, UC Berkeley Course Moderators Fritz Sommer and Jeff Teeters, Redwood Center for Theoretical Neuroscience Speakers To complement the main course instruction there will be lectures in the evenings by local Berkeley and UCSF neuroscientists presenting their research using quantitative approaches. Requirements Applicants should be familiar with linear algebra, probability, differential and integral calculus and have some experience using MatLab and Python. Each student should bring a laptop with the software installed. Cost There is no cost to attend. Assistance for travel, housing and food costs is in general not provided, (except for students who are sponsored by MSRI or the Simons Institute; see below). Potential financial support Support for a limited number of students to attend will be provided through both MSRI and the Simons Institute for the Theory of computing. Applicants who are at a MSRI partner institution can be admitted to the course and receive support for attending through MSRI as described at: http://www.msri.org/web/msri/scientific/workshops/summer-graduate-school Applicants with a Computer Science background are invited to apply for support by the Simons Institute for the Theory of Computing and the Computer Community Consortium (CCC). See “How to Apply” section. Housing There may be some limited dorm housing available. Cost is $742 per person in a shared double room, which includes an all-you-can-eat buffet dinner on evenings that meals are not supplied with the course. We will help coordinate sharing of dorm rooms for those who wish to stay in the dorms. Other housing options include: a hostel near campus ( http://berkeleyhostel.com) which is $32 / night for a bed in shared dorm room; nearby hotels (http://visitberkeley.com/stay) and accommodations advertised through craigslist.org and airbnb.org. We will help students setup groups to search for shared housing together. Food Most meals are not included with the course, although breakfast items, snacks and some dinners will be provided. Food for other meals can be purchased at the dorm cafeteria and local restaurants. How to apply There are two methods of applying. Method 1) Students at a MSRI partner institution can be admitted to the course and receive support for attending through MSRI as described at: http://www.msri.org/web/msri/scientific/workshops/summer-graduate-school Method 2) All non-MSRI applications are submitted via the online form linked from: http://crcns.org/course. A curriculum vitae and a letter of recommendation are required. Those applying using method 1 can also apply using method 2 (in case the MSRI supported positions are all taken). Applicants with a computer science background who wish to apply for support from the Simons Institute for the Theory of Computing must apply using method 2 and include additional information as instructed on the application form. The course is limited to 25 students. Deadlines Applications must be received by April 6 (or March 1, for MSRI’s sponsored students). Notifications of acceptance will be given by the end of April. If staying in dorm housing, and not sponsored by MSRI or the Simons Institute, payment for housing and the meal plan must be received one week before the start of the course. Questions Questions about the course can be sent to course [at] crcns.org. Topics covered Basic approaches: - The problem of neural coding - Spike trains, point processes, and firing rate - Statistical thinking in neuroscience - Theory of model fitting / regularization / hypothesis testing - Bayesian methods - Spike sorting - Estimation of stimulus-response functionals: regression methods, spike-triggered covariance - Variance analysis of neural response - Estimation of SNR. Coherence Information theoretic approaches: - Information transmission rates and maximally informative dimensions - Scene statistics approaches and neural modeling Techniques for analyzing multiple-unit recordings: - Cross-correlation and JPSTH - Sparse coding/ICA methods, vanilla and methods including statistical models of nonlinear dependencies - Unitary event analysis - Methods for detection of higher-order correlations - Correlation approaches for massively parallel spike trains - Proper surrogates for spike synchrony analysis - Methods for assessing functional connectivity - Advanced topics in generalized linear models - Low-dimensional latent dynamical structure in network activity–Gaussian process factor analysis/newer methods Towards building a theory of the brain: - Applications of mathematical analysis of dynamical systems in neuroscience - Approaches based on methods from theoretical computer science

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Final program, qbio seminar in Bilbao, February 17-18, 2015
by Jesus Cortes 10 Feb '15

10 Feb '15

This is the final program for the BCAM workshop in Quantitative Biomedicine next week Tuesday, February 17, 2015 9:30-11:30. Session 1. 09:30-10:10 Joanna Tyrcha. Stochastic stability and dynamic behavior of a compound cell-cycle model 10:10-10:50 Mathieu Desroches. Mixed-Mode Bursting Oscillations (MMBOs): slow passage through spike-adding canard explosion 10:50-11:30 Albert Granados. The period adding phenomenon in periodically driven hybrid spiking models 11:30-12:10. Coffee Break 12:10-14:10 Session 2. 12:10-12:50 Edward J. Vigmond. Cardiac Applications of Computational Electrophysiology 12:50-13:30 Pablo Lamata. Extraction of diastolic biomarkers through personalization of computational models 13:30-14:10 Aciel Eshky. Condition Monitoring of Athletes with a Wearable Heart Rate Variability Sensor 14:10-15:20 Lunch 15:20-18:00. Session 3. 15:20-16:00 Cesar Caballero. The power of haemodynamic deconvolution for mapping brain dynamics with BOLD functional MRI 16:00-16:40 Andrea Fuster. Geometric framework for diffusion MR images of the brain: theory and applications 16:40-17:20 Ernesto Sanz-Arigita. Multimodality MRI in different groups at risk for developing Alzheimer’s disease: towards multidimensional brain imaging biomarkers. 17:20-18:00 Pierrick Coupe. New patch-based estimators for early detection of Alzheimer’s disease Wednesday, February 18, 2015 9:30-11:30. Session 4. 09:30-10:10 Bert Kappen. Explaining missing heritability with Gaussian Process regression 10:10-10:50 Alberto Llera. Efficient Gaussian/Inverse Gammas mixture-models: a new tool for thresholding ICA statistical maps from fMRI data 10:50-11:30 Estibaliz Garrote. Computer vision applied to digital pathology: image search engine based on clinical similarity 11:30-12:10 Coffee Break 12:10-14:10. Session 5. 12:10-12:50 Michael Wibral. Information transfer and causal interactions - Conceptual differences and combined analyses strategies 12:50-13:30 Luca Faes. Dynamics of Information Storage, Transfer and Modification in the Cardiovascular System 13:30-14:10 Adam Barrett. Synergistic and redundant information sharing in Gaussian systems 14:10-15:20 Lunch 15:20-18:00. Session 6. 15:20-16:00 Ruedi Stoop. Power-law size distribution of activated avalanches - what do they really mean? 16:00-16:40 Daniele Marinazzo. Tracking slow modulations in synaptic gain using dynamic causal modelling: Validation in epilepsy 16:40-17:20 Paolo Paradisi. Intermittency-based complexity measures in brain EEG data 17:20-18:00 Jordi Soriano. Experiments in Neuronal Cultures: Exploring Open Questions in Physics and Medicine

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Fellowships in Theoretical and Computational Neuroscience at the University of Pennsylvania
by Vijay Balasubramanian 10 Feb '15

10 Feb '15

Postdoctoral Fellowships in Theoretical and Computational Neuroscience University of Pennsylvania The Computational Neuroscience Initiative (CNI, http://cni.upenn.edu) of the University of Pennsylvania seeks exceptional candidates for two CNI Postdoctoral Fellowships. Candidates with strong quantitative skills from a variety of fields including neuroscience, cognitive science, psychology, physics, mathematics, and engineering will be considered. The selected Fellows will join an inter-disciplinary research environment in historic Philadelphia. CNI Fellows will be encouraged to foster collaborative research between multiple labs. The CNI supports inter-disciplinary and collaborative research at the frontier of knowledge about the brain, behavior, and the mind. We focus on systems-level approaches that integrate theory and computation with experiment. Our members include faculty, post-docs, and students from multiple programs and departments including neurobiology, cognitive science, psychology, physics, mathematics, electrical engineering, and computer science. Our research and training spans the three major elements of the field of Computational Neuroscience: 1) Theory -- understanding the brain as an information-processing machine; 2) Experiments -- providing quantitative methods to aid in the design, implementation, analysis, and interpretation of empirical studies that probe all levels of brain function, from molecules to behavior; and 3) Applications -- including robotics, brain-machine interfaces, and new clinical tools. Applications should be submitted by email to compneuro(a)sas.upenn.edu <mailto:compneuro@sas.upenn.edu> and should consist of a CV and a cover letter stating the candidate's research experience and reasons for applying to this Fellowship. Please arrange for up two three letters of recommendation to be sent to the same email address with the candidate's name in the subject line. Review of applications will begin on February 30 and continue on a rolling basis until the positions are filled. The University of Pennsylvania values diversity and seeks talented individuals from diverse backgrounds (http://jobs.hr.upenn.edu <http://jobs.hr.upenn.edu/>). Vijay Balasubramanian, Director David Brainard, Co-Director Joshua Gold, Co-Director

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Call for Abstracts – IWSP7: Epilepsy Mechanisms, Models, Prediction & Control
by Levin Kuhlmann 10 Feb '15

10 Feb '15

The 7th International Workshop on Seizure Prediction (IWSP7: Epilepsy Mechanisms, Models, Prediction & Control) will bring together world leading epileptologists, engineers, physicists, mathematicians, neurosurgeons and neuroscientists to focus on epilepsy research in Melbourne Australia from 3-6 August 2015. Abstract submission deadline: 16th April 2015. Notification of acceptance: 31st May 2015. Early bird registration: full: AU$465; Student/Early Career Researcher: AU$165. Early bird registration deadline: 30th June 2015. Standard registration: full: AU$565; Student/Early Career Researcher: AU$265. Over 30 generous travel stipends will be awarded to participants submitting the best abstracts as determined by the IWSP7 Scientific Advisory Board. The majority will be awarded to undergraduate or postgraduate students and early career researchers (people who completed their PhD within the period of the 3 years preceding 3rd August 2015). Topics for abstracts include, but are not limited to: seizure prediction, detection and control; seizure mechanisms, animal models and human neurophysiology; neuroimaging of epilepsy/seizure localisation; computational modelling of epilepsy; epilepsy networks; high frequency oscillations; model-based estimation, statistical signal processing or control theory applied to epilepsy. For information on invited speakers and the preliminary conference program, and how to submit abstracts and register visit: www.iwsp7.org<http://www.iwsp7.org> Please forward this notice to anyone that you think might be interested. We look forward to seeing you at the meeting! On behalf of the local organizing committee Levin Kuhlmann, PhD David B. Grayden, PhD Mark J. Cook, MD Dean R. Freestone, PhD Alan Lai, PhD Elma O'Sullivan-Greene, PhD Andre Peterson, BSc(hons) Email: organizingcommittee(a)iwsp7.org<mailto:organizingcommittee@iwsp7.org>

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SAND 7 Workshop Announcement
by Barbara Dorney 09 Feb '15

09 Feb '15

The seventh international workshop on Statistical Analysis of Neural Data (SAND7) will take place May 27-29, 2015, in Pittsburgh, PA. Partial travel support is available. Requests for financial support should be made by MARCH 15. There will be talks by senior investigators and junior investigators. The talks by young investigators (graduate student or postdoc/faculty within 5 years of Ph.D.) will be selected on a competitive basis. Any young investigator interested in presenting their work as a talk should submit an abstract by MARCH 1. Please see our website: http://sand.stat.cmu.edu There will also be a poster session, to which all participants are invited to contribute. Talks and posters may involve new methodology, investigation of existing methods, or application of state-of-the-art analytical techniques. Here are the confirmed keynote speakers: Gyorgy Buzsaki (NYU) Marlene Cohen (University of Pittsburgh) Adrienne Fairhall (University of Washington) Bruce Rosen (Harvard, MGH) Mark Schnitzer (Stanford) Sebastian Seung (Princeton) This workshop series is concerned with analysis of neural signals from various sources, including EEG, fMRI, MEG, 2-Photon, and extracellular recordings. It aims to define important problems in neuronal data analysis and useful strategies for attacking them; foster communication between experimental neuroscientists and those trained in statisti- cal and computational methods encourage young researchers, including graduate students, to present their work; and expose young researchers to important challenges and oppor- tunities in this interdisciplinary domain, while providing a small meeting atmosphere to facilitate the interaction of young researchers with senior colleagues. The organizers are Emery Brown, Elizabeth Buffalo, Rob Kass, Liam Paninski, Sri Sarma and Jonathan Victor. -- Barbara Dorney Assistant to the Co-Director CNBC - Carnegie Mellon University 115 Mellon Institute 4400 Fifth Avenue Pittsburgh, PA 15213 (412) 268.6557 (412) 268.5060 (fax)

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Navigation workshop, April 11th, Edinburgh
by Barbara Webb 09 Feb '15

09 Feb '15

We are pleased to announce a workshop "Spatial computation: from neural circuits to robot navigation". The workshop will take place in the Informatics Forum in Edinburgh on April 11th from 9 am to 6 pm. This is the day immediately before start of the British Neuroscience meeting in Edinburgh. The workshop will address approaches to computations underlying navigation from the perspectives of neuroscience and robotics. A list of confirmed speakers and a link for registration are here: http://blog.inf.ed.ac.uk/spatialcomputationworkshop/ -- The University of Edinburgh is a charitable body, registered in Scotland, with registration number SC005336.

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2nd CFP - Special Session on Transfer Learning - International Work Conference on Artificial Neural Networks, 10-12 June, 2015
by Jorge M. Santos 09 Feb '15

09 Feb '15

(Deadline Extension) Please consider to contribute to the Special Session on Transfer Learning International Work Conference on Artificial Neural Networks, 10-12 June, 2015 - http://iwann.ugr.es/2015 Transfer Learning (TL) aims to transfer knowledge acquired in one problem, the source problem, onto another problem, the target problem, dispensing with the bottom-up construction of the target model. The TL approach has gained significant interest in the Machine Learning (ML) community since it paves the way to devise intelligent learning models that can easily be tailored to many different domains of applicability. The following aspects have recently contributed to the emergence of TL: Generalization Theory: TL often produces algorithms with good generalization capability for different problems; Efficient TL algorithms: TL provides learning models that can be applied with far less computational effort than standard ML methods; Unlabeled data: TL can be advantageous since unlabeled data can have severe implications in some fields of research, such as in the biomedical field. Some examples of topics for this special session: Big Data with Deep Neural Networks; Generalization Bounds; Domain Adaptation or Covariate Shift; Algorithms for TL; New advancements in TL; Real-world applications. Deadline: 23 February 2015 Organizers Luís M. Silva, Dep. of Mathematics, University of Aveiro, Portugal - lmas(a)ua.pt Jorge M. Santos, Dep. of Mathematics, School of Engineering, Polytechnic of Porto, Portugal - jms(a)isep.ipp.pt

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PhD student position in the lab of Susanne Schreiber (Computational Neurophysiology), Berlin
by Margret Franke 09 Feb '15

09 Feb '15

PhD student position in the lab of Susanne Schreiber (Computational Neurophysiology) in Berlin www.neuron-science.de We are currently looking for a motivated PhD student to join us in the exploration of computational properties of neurons. Our group is embedded in the Department of Biology at Humboldt-University Berlin and the Bernstein Center for Computational Neuroscience Berlin, located on the beautiful Campus Nord in the center of the city. We are particularly interested in how cell-intrinsic physiological processes affect neuronal computation in single neurons and networks. To this end we use theoretical approaches in combination with the analysis of experimental data (obtained by experimental collaborators in vertebrate and invertebrate systems). Many of our projects take the evolutionary perspective into account, with the aim to improve our understanding of how constraints, such as limited energetic resources or fluctuating environmental variables (like temperature), shaped the design of neuronal systems. The PhD project will involve biophysical modeling of neurons, intending to derive principles that generalize across multiple brain areas or nervous systems. The PhD student will be given the opportunity to cooperate with experimental groups in the Berlin area. Moreover, suitable candidates may participate in the structured PhD program "Sensory Computation in Neural Systems" (GRK 1589, https://www.bccn-berlin.de/Graduate+Programs/2_Doctoral+Program/) providing lively interactions with other research groups and students in the fields of computational neuroscience, systems neurobiology, and machine learning. A strong background in physics, biophysics, computational neuroscience, or computational biology is recommended. Moreover, candidates should have solid experience in programming (python or matlab to solve ODEs/SDEs), analytical skills, and a keen interest in neurophysiological questions. If interested, please send an email to Susanne Schreiber (email: s.schreiber :AT: hu-berlin.de) including a letter of motivation, a CV, and a copy of the current academic transcripts. Applications will be accepted until the position is filled. In order to apply for a scholarship in the structured PhD program, please contact us as soon as possible. The official deadline for this program is March 15th, 2015. -- Margret Franke Managing Director Bernstein Center for Computational Neuroscience Humboldt-Universität zu Berlin Unter den Linden 6 10099 Berlin phone: (030) 2093-9110 fax: (030) 2093-6771

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Kosice Neuroscience Workshop 20-24 April 2015
by Norbert Kopco 09 Feb '15

09 Feb '15

SAVE THE DATE! The Second Workshop and Lecture Series on */"Cognitive neuroscience of auditory and cross-modal perception"/* 20 - 24 April 2015 Kosice, Slovakia http://pcl.upjs.sk/ Objectives: This workshop and lecture series will include introductory lectures and advanced research talks on a range of topics related to the */neural processes of auditory, visual and cross-modal perception/*. The talks will illustrate the */multidisciplinary character of cognitive neuroscience research/*, covering behavioral, neuroimaging, and modeling approaches, as well as applications of the research in auditory prosthetic devices. The workshop is aimed at */early-stage and advanced students and young researchers/*, and it will provide ample opportunities for direct interactions between the lecturers and the attendees. *Format* Lectures 20 - 22 April, Consultations 23 – 24 April *Venue* Historicka aula, P. J. Safarik University, Srobarova 2, 040 11 Kosice, Slovakia *Organizers* Norbert Kopco, PhD. (norbert.kopco(a)upjs.sk <mailto:norbert.kopco@upjs.sk>) Frederick Gallun, PhD. (Frederick.Gallun(a)va.gov <mailto:Frederick.Gallun@va.gov>) *Organizing team and contact* Beata Tomoriova, Lubos Hladek, Perception and Cognition Lab <http://pcl.upjs.sk>,**kogneuro(a)gmail.com <mailto:kogneuro@gmail.com> *Speakers (lecture topics TBA, see last year’s topics at *http://pcl.upjs.sk/workshop2014/*)* Simon Carlile (University of Sydney) Pierre Divenyi (Stanford University) Christopher Stecker (Vanderbilt University) Bernhard Laback (Austrian Academy of Sciences) Volker Hohmann (University of Oldenburg) Arash Yazdanbakhsh (Boston University) Aaron Seitz (University of California, Riverside) Frederick (Erick) Gallun (US Dept. of Veterans Affairs and Oregon Health & Science University) Istvan Winkler (Hungarian Academy of Science) Travel, accommodation, visitor information Attendees are kindly requested to make their own travel and accommodation arrangements. /Travel: /The Kosice Airport <http://www.airportkosice.sk/en/> (http://www.airportkosice.sk/en/) is served by Austrian Airlines <http://www.austrian.com/> (http://www.austrian.com/) and Czech Airlines <http://www.csa.cz> (http://www.csa.cz/) via Vienna, Prague, Bratislava, and by low-cost airline Wizzair <http://wizzair.com/en-GB/Search> (http://wizzair.com/en-GB/Search) from London Luton Airport. Alternatively you can fly to Budapest and take a 3.5-hr shuttle bus to Kosice, for example, using the cassoviaexpres <http://cassoviaexpres.sk/en/> (http://cassoviaexpres.sk/en/) shuttle bus. From Krakow you can take the 4-hr shuttle bus operated by Airtrans.sk <http://airtrans.sk/en/>. More information about how to get to Kosice (also by train or bus) can be found at http://www.visitkosice.eu/en/to-get-there/arriving-to-the-city . /Accommodation:/ There are several hotels close to workshop venue, for example Hotel Teledom <http://www.hotelteledom.sk>, Villa Regia <http://villaregia.sk/en/>, Doubletree by Hilton <http://doubletree3.hilton.com/en/hotels/slovak-republic/doubletree-by-hilto…>, Hotel Yasmin <http://www.hotel-yasmin.sk/>, Hotel Maraton <http://www.hotelmaraton.sk/> (for more hotel options please see http://www.booking.com, http://www.hotels.com, for hostels see: http://www.hostels.com, http://www.hostelworld.com) /Visitor information and current events:/ see http://www.visitkosice.eu/ , http://www.slovaktours.eu/, http://www.mickosice.sk/ <http://www.mickosice.sk/index.php?lang=eng>, http://slovakia.travel/ , or http://www.slovakia.com/ * Registration* The workshop is open to all interested students/scientists. Registration is free of charge but required (mostly for organizational reasons). In order to register, please send an email to kogneuro(a)gmail.com stating your name and affiliation, dates on which you are planning to attend. In case you would like to have a presentation please send us an abstract (up to 200 words) and an indication whether you prefer poster or oral presentation no later than April 10, 2015. -- doc. Norbert Kopco, Ph.D. Assoc Professor / Senior Researcher: Inst of Computer Sci, Faculty of Science, Safarik Univ, Kosice, Slovakia Adjunct: Ctr for Computational Neurosci (CompNet), Boston University & Martinos Ctr for Biomed Imaging, Harvard Med School - Mass Gen Hospital P: +16175759556 F: +14847279884, kopco(a)bu.edu, http://cns.bu.edu/~kopco

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Advanced Course in Computational Neuroscience 2015
by Máté Lengyel 09 Feb '15

09 Feb '15

ADVANCED COURSE IN COMPUTATIONAL NEUROSCIENCE 9-29 August 2015, Champalimaud Centre for the Unknown, Lisbon, Portugal + pre-school 5-7 August 2015 http://www.accn.pt Applications deadline: 15 March 2015 DIRECTORS * Gilles Laurent (Max Plank Institute for Brain Research, Germany) * Máté Lengyel (University of Cambridge, UK) * Christian Machens (Champalimaud Neuroscience Programme, Portugal) This three-weeks school teaches the central ideas, methods, and practice of modern computational neuroscience through a combination of lectures and hands-on project work. Each morning will be devoted to lectures given by distinguished international faculty on topics across the breadth of experimental and computational neuroscience. During the rest of the day, students will work on research projects in teams of 2-3 people under the close supervision of expert tutors and faculty. Research projects will be proposed by faculty before the course, and will include the modeling of neurons, neural systems, behavior, the analysis of state-of-the-art neural data (behavioral data, multi-electrode recordings, calcium imaging data, connectomics data, etc.), and the development of theories to explain experimental observations. The course is designed for graduate students and postdoctoral fellows from a variety of disciplines, including neuroscience, physics, electrical engineering, computer science, mathematics and psychology. Students are expected to have a keen interest and basic background in neurobiology, a solid foundation in mathematics, as well as some computer experience. An optional three-day pre-school in mathematics and programming is available to students who want to catch up on or fine-tune their math and programming skills. Essential details: * Course size: 24 students maximum * Fee (which covers tuition, lodging, and meals): 2250 EUR (+ 245 EUR for optional pre-school) * Scholarships and travel stipends are available. * Application deadline: 15 March 2015 * Notification of results: April 2015 Information and application http://www.accn.pt Contact address: Tânia Li Chen <tania.chen(a)neuro.fchampalimaud.org> FACULTY * Nicolas Brunel (University of Chicago, USA) * Claudia Clopath (Imperial College London, UK) * Peter Dayan (Gatsby Computational Neuroscience, UCL, UK) * David Fitzpatrick (Max-Planck Florida Institute for Neuroscience, USA) * Boris Gutkin (École Normale Supérieure, France) * Michael Hausser (Wolfson Institute for Biomedical Research, UCL, UK) * Moritz Helmstaedter (MPI Brain Research, Germany) * Claus Hilgetag (University Medical Center Hamburg-Eppendorf, Germany) * Matthias Kaschube (Frankfurt Institute for Advanced studies, Germany) * Simon Laughlin (University of Cambridge, UK) * Gilles Laurent (MPI Brain Research, Germany) * Máté Lengyel (University of Cambridge, UK) * Jennifer Linden (Ear Institute, UCL, UK) * Christian Machens (Champalimaud Neuroscience Programme, Portugal) * Zachary Mainen (Champalimaud Neuroscience Programme, Portugal) * Tony Movshon (New York University, USA) * Michael Orger (Champalimaud Neuroscience Programme, Portugal) * Alexandre Pouget (University of Geneva, Switzerland) * Maneesh Sahani (Gatsby Computational Neuroscience, UCL, UK) * Eero Simoncelli (New York University, USA) * Daniel Wolpert (University of Cambridge, UK) -- Mate Lengyel, PhD Computational and Biological Learning Lab Cambridge University Engineering Department Trumpington Street, Cambridge CB2 1PZ, UK tel: +44 (0)1223 748 532, fax: +44 (0)1223 765 587 email: m.lengyel(a)eng.cam.ac.uk web: www.eng.cam.ac.uk/~m.lengyel

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CFP: Signal Processing Special Issue on Big Data Meets Multimedia Analytics
by 刘伟锋 08 Feb '15

08 Feb '15

Dear all, Sorry for the cross posting of this CFP message. CFP: Signal Processing Special Issue on Big Data Meets Multimedia Analytics With the rapid development of computing and sensing technologies, such as the emergence of social networking websites and wearable devices, many new research opportunities and challenges for multimedia content analysis have arisen. Many big data modeling methods, computing algorithms, and signal processing technologies have recently been successfully developed and applied to multimedia content analysis: for example, multi-view learning algorithms have been proposed for exploring the variety of multimedia content; sparse and manifold learning have been developed for high dimensional multimedia data representation; deep learning has produced promising results in large scale multimedia retrieval; and compressive sensing and new sampling schemes have been investigated for big data analytics. Motivated by the inclination to collect a set of recent advances and results in these related topics, provide a platform for researchers to exchange their innovative ideas on big modeling and computing solutions for multimedia content analytics, and introduce interesting utilizations of modeling and computing algorithms for particular social/personal media applications, this special issue will target emergent big modeling and computing methods for multimedia signal processing and understanding (with a special focus on social media and personal data). To summarize, this special issue welcomes a broad range of submissions on the development and use of artificial intelligence and computing techniques for multimedia analytics. We are especially interested in: 1) theoretical advances as well as algorithm developments in big data technology for specific social/personal media analytics problems; 2) reports of practical applications and system innovations in social/personal media analytics; and 3) novel datasets as test beds for new developments, preferably with implemented standard benchmarks. The following list suggests (but is not limited to) possible topics of interest: · Big Data Technology Specifically for Multimedia Analytics · Big Data Technology for Multimedia Annotation, Tagging and Classification · Big Data Technology for Multimedia Abstraction and Summarization · Big Data Technology for Multimedia Indexing and Retrieval · Big Data Technology and Computing for Social Media Analytics · Big Data Technology and Computing for Biological Data · Big Data Technology and Computing for Personal Data Mining · Modeling of Wearable Device Sensor Streams · Personal Data based Social Network Analysis and Web Mining · Cloud Computing for Social Intelligence and Personal Data · Deep Learning for Social Media Analytics · Deep Learning for Security in Social Media Important dates: Manuscript Submission: May 01, 2015 Initial Decision: August 01, 2015 R1 Version: October 01, 2015 Acceptance Notification: November 01, 2015 Final Manuscripts Due: November 15, 2015 Anticipated Publication: January 01, 2016 Submission: Manuscripts (Please follow Signal Processing publishing format, details can be found athttp://www.elsevier.com/ journals/signal-processing/0165-1684/guide-for-authors) should be submitted via the Electronic Editorial System of Elsevier: http://ees.elsevier.com/sigpro/. Please make sure to select the "SI: BDMA" as Article Type during the submission process.

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INCF Short Course on Information Processing in Neural Systems
by Frank Jäkel 05 Feb '15

05 Feb '15

+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ INCF Short Course on Information Processing in Neural Systems -- From Single Neurons to Large-Scale Models of Cognition -- May 2-10, 2015 @ Institute of Cognitive Science, Osnabrück, Germany +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ One of the big challenges in neuroinformatics is bridging the gap between our biophysical understanding of single cells and of networks of neurons on the one side, and the cognitive functions that are characterized in terms of information processing on the other side. This INCF Short Course will provide lectures and hands-on tutorials ranging from dynamical systems theory to cognitive modeling. Target Audience: PhD candidates and post-docs with backgrounds in neuroinformatics, theoretical neuroscience, complex systems, machine learning, applied mathematics/statistics or cognitive modeling. Topics: Dynamical systems: attractors, bifurcations, etc. (Herbert Jäger) Single neuron dynamics, networks, and computation (Nicolas Brunel) Mean-field theory, neurodynamics, and decision-making (Gustavo Deco) Probabilistic models of population coding and perception (tba) Reservoir computing in simple cognitive systems (Gordon Pipa) Learning of sensory representations in neural systems (Peter König) Neural architectures for biological cognition (tba) Neural networks, kernel methods, and categorization (Frank Jäkel) A tutorial on reservoir computing (Pipa & Jäger) A tutorial on large-scale simulations in Nengo (tba) A tutorial on information processing models with NEST (Marc-Oliver Gewaltig) The yearly, two-day OCCAM workshop (www.occam-os.de) is integrated into the INCF course and participants of the INCF course will also take part in the workshop. Applications will be accepted until March 7, 2015. The registration fee is 250 Euros. We can offer a limited number of travel stipends to support students. More information on the course and on application details can be found on the course webpage: http://www.incf.ni.uos.de/

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Osnabrueck Computational Cognition Alliance Meeting (OCCAM 2015)
by Frank Jäkel 05 Feb '15

05 Feb '15

Dear Colleague, we would like to invite you to register for the 5th +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ Osnabrück Computational Cognition Alliance Meeting (OCCAM 2015) "From Simple Neurons to Large-Scale Models of Cognition" May 6-7, 2015. +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ List of invited speakers: Nicolas Brunel Gustavo Deco Wolfgang Einhäuser Virginia Flanagin Sonja Grün Marc-Oliver Gewaltig Herbert Jäger Gordon Pipa Kai Vogeley The workshop will take place in Osnabrück, Germany, and will be hosted by the Institute of Cognitive Science (University of Osnabrück). Details can be found below and on the following webpage: http://www.occam-os.de The registration deadline is March 7, 2015 (first come first served). The registration fee is 100,- Euros. This year the OCCAM workshop is co-located with an INCF Short Course on the same topic (http://www.incf.ni.uos.de/) The OCCAM workshop series aims at understanding the principles of information processing in the brain with a particular focus on 3 major topics: 1. Neural coding and representation in hierarchical systems 2. Self-organization in dynamical systems 3. Mechanisms for probabilistic inference There will also be a poster session where conference participants will have the opportunity to present their work. The deadline for submitting an abstract for a poster presentation is also March 7. Best regards, Frank Jäkel, Peter König, Gordon Pipa (Organizing committee)

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Reminder: UAI 2015 - Call for Workshops
by Irina Rish 04 Feb '15

04 Feb '15

UAI 2015 - Call for Workshops http://www.auai.org/uai2015/workshops.shtml Proposals are solicited for workshops to be held in conjunction with the The Conference on Uncertainty in Artificial Intelligence (UAI) in Amsterdam, The Netherlands, in July 2015. The workshops will be held on Thursday, July 16, 2015 (tentative date). These workshops present an excellent opportunity to address a specific topic of your choice on the intersection of knowledge representation, machine learning and reasoning under uncertainty. We are looking for half-day or full-day workshop proposals. Important dates Workshop proposal deadline February 19, 2015 Proposal acceptance notification March 2, 2015 Workshop submissions due May 8, 2015 (suggested date) Workshop author notification May 22, 2015 (suggested date) Workshop day: July 16, 2015 (tentative) Workshops are a great format for active research on new topics. The ideal workshop covers a compelling subject of current or upcoming research, and includes an impressive set of speakers with diverse backgrounds to discuss the subject. Discussion via panels and identification of open problems and challenges are great components to include. Organization The format, style, and content of accepted workshops is under the control of the workshop organizers and largely autonomous from the main conferences. The workshops can be up to seven hours long, split into morning and afternoon sessions. Workshop organizers are expected to manage the workshop content, specify the workshop format, be present to moderate the discussion and panels, invite experts in the domain, and maintain a website for the workshop. Workshop registration will be handled centrally by the main conference. Submission Instructions Proposals should clearly specify the following: Workshop title (what is it called?) Topic (what is it about?) Motivation (why a workshop on this topic?) Impact and expected outcomes (what will having the workshop do?) Potential list of invited speakers (who might come?) List of related publications (where can we learn more?) Main workshop organizer (who is making it happen?) Other organizers (who else is making it happen?) Bio for each organizer (who are you?) Workshop URL (where will interested parties get more information?) Detailed descriptions of last year's workshops can be found at: http://auai.org/uai2014/workshopsDetails.shtml. Workshop proposals should be submitted via email in PDF format to uai2015.workshops(a)gmail.com by February 19, 2015 (earlier submissions are encouraged as well). Soon after submission, proposers should expect to receive a verification of receipt. Irina Rish Contact: irina.rish(a)gmail.com Workshops chair UAI 2015

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Last Mile: IMMM 2015 and DATASETS 2015 || June 21 - 26, 2015 - Brussels, Belgium
by Cristina Pascual 04 Feb '15

04 Feb '15

INVITATION: ================= The submission deadline is extended to February 18, 2015. Please consider to contribute to and/or forward to the appropriate groups the following opportunity to submit and publish original scientific results to: - IMMM 2015, The Fifth International Conference on Advances in Information Mining and Management - DATASETS 2015, The International Symposium on Challenges for Designing and Using Datasets Authors of selected papers will be invited to submit extended article versions to one of the IARIA Journals: http://www.iariajournals.org ================= ============== IMMM 2015 | DATASETS 2015 | Call for Papers =============== CALL FOR PAPERS, TUTORIALS, PANELS IMMM 2015, The Fifth International Conference on Advances in Information Mining and Management General page: http://www.iaria.org/conferences2015/IMMM15.html Submission page: http://www.iaria.org/conferences2015/SubmitIMMM15.html DATASETS 2015, The International Symposium on Challenges for Designing and Using Datasets General page: http://www.iaria.org/conferences2015/DATASETS.html Submission page: http://www.iaria.org/conferences2015/DATASETS.html#SubmitAPaper Events schedule: June 21 - 26, 2015 - Brussels, Belgium Contributions: - regular papers [in the proceedings, digital library] - short papers (work in progress) [in the proceedings, digital library] - ideas: two pages [in the proceedings, digital library] - extended abstracts: two pages [in the proceedings, digital library] - posters: two pages [in the proceedings, digital library] - posters: slide only [slide-deck posted at www.iaria.org] - presentations: slide only [slide-deck posted at www.iaria.org] - demos: two pages [posted at www.iaria.org] - doctoral forum submissions: [in the proceedings, digital library] Proposals for: - mini-symposia: see http://www.iaria.org/symposium.html - workshops: see http://www.iaria.org/workshop.html - tutorials: [slide-deck posed on www.iaria.org] - panels: [slide-deck posed on www.iaria.org] Submission deadline: February 18, 2015 Sponsored by IARIA, www.iaria.org Extended versions of selected papers will be published in IARIA Journals: http://www.iariajournals.org Print proceedings will be available via Curran Associates, Inc.: http://www.proceedings.com/9769.html Articles will be archived in the free access ThinkMind Digital Library: http://www.thinkmind.org The topics suggested by the conference can be discussed in term of concepts, state of the art, research, standards, implementations, running experiments, applications, and industrial case studies. Authors are invited to submit complete unpublished papers, which are not under review in any other conference or journal in the following, but not limited to, topic areas. All tracks are open to both research and industry contributions, in terms of Regular papers, Posters, Work in progress, Technical/marketing/business presentations, Demos, Tutorials, and Panels. Before submission, please check and comply with the editorial rules: http://www.iaria.org/editorialrules.html IMMM 2015 Topics (for topics and submission details: see CfP on the site) Call for Papers: http://www.iaria.org/conferences2015/CfPIMMM15.html ============================================================ Mining mechanisms and methods Data mining algorithms; Media adaptive mining; Agent-based mining; Content-based mining; Context-aware mining; Automation of data extraction; Data mining at a large; Domain-driven data mining; Graph-based data mining; Multilabel information; Multimodal mining; Cloud-based mining; Mining using neurocomputing techniques Mining support Querying for mining; Questions for digital investigation; Similarity search; User-generated content; Visualizing data mining; Internationalization and localization techniques for profile/context-based visualization Type of information mining Concept mining; Process mining; Concept mining; Knowledge mining; Knowledge discovery; Mining image and video; Mining patterns; Opinion mining; Graph mining; Ontology mining; Semantic annotations and mining; Document mining; Spatial mining; Speech mining; Text mining; Web mining; XML data mining Pervasive information retrieval Context and location information retrieval; Mobile information retrieval; Geo-information retrieval; Context-aware information retrieval; Access-driven information retrieval; Location-specific information retrieval; Spacial information retrieval; Semantic-driven retrieval Automated retrieval and mining Automated information extraction; Agent-based data mining and information discovery; Agent-based knowledge; Datamining-based agents and multi-agent systems; Agent-mining intelligent applications and systems; Automated retrieval of multimedia streams; Automated retrieval from multimedia archives; Automated copyright infringement detection and watermarking; Automated content summarization; Automatic concept detection, categorization, and genre detection; Automatic speech recognition; Automated cross-media linking Mining features Dimensionality reduction; Feature weighting; Subset selection; Feature extraction; Feature construction; Data streams and time series; Selection in high-dimensional domains; Multilingual data mining; Multimedia mining; String processing and data mining; Mining association rules; Mining social relationships; Mining linked data; Mining sequential episodes from time series; Mining time-dependent data; Un-supervised data mining; Semi-structured data; Mining location-sensitive data; Concept-drift in data mining Information mining and management Data cleaning; Data updating; Segmentation and clustering; Mining transient information; Warehousing; Web syndication; Data filtering and aggregation; Optimal pruning; Data summarization; Knowledge injection, discovery and classification; Uncertainty removal; Managing incompleteness Mining from specific sources Bio data mining; Climate data mining; Data mining in medicine and pharmacology; Data mining in special networks (grids, sensors, etc.); Data management for mobile systems; Data management for sensors; Data mining and management for wireless systems; Dynamic network discovery; Mining from multiple sources; Mining personal semantic data; Mining from social networks; Mining from deep web; Mining from Wikipedia Data management in special environments Data management in sensor and mobile ad hoc networks; Data management in mobile peer-to-peer networks; Data management for mobile applications; Data management in mobile/temporal social networks; Management of community sensing/participatory sensing data; Managing pervasive data, sensor data streams and user devices; Managing mobile semantic data; Manging data-intensive mobile computing; Management of real-time data; Managing security data streams; Managing Mobile Web 2.0 data; Managing data in mobile clouds; Data replication, migration and dissemination in mobile environments; Web data processing and security on mobile devices; Resource advertising and discovery techniques Mining evaluation Statistics on mining; Ranking of mining results; Provenance; Privacy issues; Patterns for mining; Credibility on data mining; Performance of mining information; Data mining and computational intelligence; Intelligent data understanding; Intelligent data analysis Mining tools and applications Data mining applications; Data mining tools and enabling software; Interoperability of information mining tools; Applications for large-scale mining; Content segmentation tools (e.g., shot and semantic scene segmentation); Evaluation methods for TV and radio content analysis tools; Tools for data sets and standard resources DATASETS 2015 Topics (for topics and submission details: see CfP on the site) CfP: http://www.iaria.org/conferences2015/DATASETS.html#CallForPapers ========================== THEORY The anatomy of designing Datasets Designing context-based Datasets Metadata for Datasets Challenges in designing very large Datasets Updatable and updating Datasets Reference Datasets Datasets families Repositories of Datasets Criteria for selecting appropriate Datasets TYPES Public and private Datasets Open Datasets Big Data and Datasets Trusted Datasets Mining massive Datasets FEATURES Testing and validating Datasets Pitfalls with Datasets Reputation of Datasets Accuracy estimation of Datasets Data links in Datasets APPLICATIONS AND EXPERIMENTS Context-aware Datasets in the Internet of Things Datasets for data mining Datasets used in statistics and machine learning Online Datasets on collective behavior Datasets for analytics and knowledge discovery Regression Datasets Climate Datasets Gene Datasets Health Datasets Economic Datasets Social Datasets Transportation Datasets Urban Datasets Education/scholar Datasets ------------------------ IMMM 2015 Committee: http://www.iaria.org/conferences2015/ComIMMM15.html DATASETS 2015 Committee: http://www.iaria.org/conferences2015/DATASETS.html#Committees ==================

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Open Source Brain 2015: Building and sharing standardised neuronal models
by Padraig Gleeson 04 Feb '15

04 Feb '15

(Apologies for cross postings) Announcing the third annual Open Source Brain Workshop, May 12-14th 2015, Alghero, Sardinia. http://opensourcebrain.org/docs/Help/Meetings#OSB_2015 The Open Source Brain initiative aims to encourage collaborative, open source model development in computational neuroscience and is primarily supported by the Wellcome Trust. As with past OSB meetings <http://www.opensourcebrain.org/docs#Meetings> this workshop will bring together experimentalists, theoreticians and tool developers who are interested in creating open, community developed models of neuronal systems. Researchers interested in building and sharing models of any brain region and from any species are welcome to attend the meeting. There will be presentations on the latest developments and functionality of the OSB resource and associated technologies including NeuroML and LEMS. There will also be a special focus session on Wed 13th May on *creating and sharing experimentally constrained models of the hippocampus*. *Confirmed speakers* Giorgio Ascoli, Krasnow Institute, George Mason University, USA Tiago Branco, MRC Laboratory of Molecular Biology, Cambridge, UK Claudia Colpath, Imperial College London, UK Michael Hines, Yale University, USA Peter Jonas, Institute of Science and Technology, Austria Troy Margrie, MRC National Institute for Medical Research, London, UK Michele Migliore, National Research Council, Italy & Yale University School of Medicine, USA Yiota Poirazi, Institute of Molecular Biology & Biotechnology, Foundation for Research & Technology Hellas, Greece Stefan Remy, German Center for Neurodegenerative Diseases, Bonn, Germany Nelson Spruston, Howard Hughes Medical Institute, Janelia Farm Research Campus, Virginia, USA Full details of the workshop can be found here: http://opensourcebrain.org/docs/Help/Meetings#OSB_2015. The meeting is free to attend, but registration is required (deadline April 15th). The OSB 2015 organising committee Sergio Solinas Padraig Gleeson Angus Silver Boris Marin ----------------------------------------------------- Padraig Gleeson Room 321, Anatomy Building Department of Neuroscience, Physiology & Pharmacology University College London Gower Street London WC1E 6BT United Kingdom +44 207 679 3214 p.gleeson(a)ucl.ac.uk -----------------------------------------------------

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Faculty position opening in software engineering
by Jun Suzuki 02 Feb '15

02 Feb '15

University of Massachusetts Boston Department of Computer Science Assistant/Associate Professor The Computer Science Department at the University of Massachusetts Boston invites applications for one full-time position in Software Engineering at the rank of Assistant/Associate Professor, to begin September 1, 2015. We offer an ABET-accredited BS in Computer Science, a BS in Information Technology, an MS with an emphasis on software engineering, and a Ph.D. in Computer Science. Current faculty interests include bioinformatics, computer and human vision, data mining, databases, graphics, networks, security, software engineering, system modeling, and theoretical computer science. A PhD in computer science or a related area is required. A successful candidate at the Assistant Professor level is expected to establish a highly-recognized, externally-funded independent research program at UMass Boston. Candidates at the Associate Professor level should have a well-established research program with a significant funding record. We offer a competitive salary and start-up package. A complete application consists of a cover letter, curriculum vitae, statements about research and teaching, and the names and email addresses of three references. Please submit your application at: http://goo.gl/ZjMvYV Our campus overlooks Boston harbor; our faculty and students enjoy professional life in a center of academia and the software industry. For more information, visit us at http://www.cs.umb.edu Review of applications has begun and will continue until the position is filled. UMass Boston is an Affirmative Action, Equal Opportunity Title IX employer. -- Jun Suzuki Associate Professor of Computer Science University of Massachusetts, Boston jxs(a)cs.umb.edu http://www.cs.umb.edu/~jxs/ http://dssg.cs.umb.edu/ @JunSuzukiBoston

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