- Comp-neuro - lists.cnsorg.org

PhD opportunity at Health Data Science, Swansea, UK
by Vesna Vuksanovic May 27, 2025

May 27, 2025

Dear all I have a PhD position open in Swansea, UK. The student will be working at the intersection of computational neuroimaging and clinical applications. The focus is on how to integrate multiple sources of data to model brain networks in a medical condition that affects the central nervous system. Please see more details here: https://www.swansea.ac.uk/postgraduate/scholarships/research/medical-stdavi… Feel free to get in contact informally, and please share with those who might be interested. Best wishes, Vesna ____________________________ Vesna Vuksanovic, PhD Programme Lead, MSc Health Data Science Senior Lecturer Health Data Science _______________________________________________________________________________________________________________________________________________ Swansea University Medical School Data Science Building Office DS04 1st Floor Tel. +44(0)1792 60 2212 Web: vesna-vuksanovic<https://www.swansea.ac.uk/staff/vesna.vuksanovic/>

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Python Package Release: Echo State Network 1.0.0
by Fabrizio Damicelli May 26, 2025

May 26, 2025

Dear Community, I'd like to announce the new release (version 1.0.0) of the Python Package "echoes": Machine Learning with Echo State Networks, a scikit-learn compatible package. Code Repository: https://github.com/fabridamicelli/echoes Especially in the realms of "Biologically-inspired Neural Networks", "Shallow Learning" and "Recurrent Neural Networks" in general. A few interesting features: - Installation and getting started is easy: `pip install echoes` * API follows scikit-learn standard (eg fit/predict). - It is light-weight and fast (`numba` accelerated), run your experiments on a laptop - Flexible and customizable, e.g. use arbitrary connectivity, add custom activations, visualize neurons activity, etc. * Example notebooks: https://github.com/fabridamicelli/echoes/tree/master/examples/notebooks - Documentation: https://fabridamicelli.github.io/echoes/ As of today the package registers already ~40K total downloads, ~600/month (pypi.org) and has been used already in a few research projects: - Hadaeghi et. al. (2021) Spatio-temporal feature learning with reservoir computing for T-cell segmentation in live-cell Ca2+ fluorescence microscopy: www.nature.com/articles/s41598-021-87607-y#Sec4 - Fakhar et. al. (2022) Causal Influences Decouple From Their Underlying Network Structure In Echo State Networks: arxiv.org/abs/2205.11947 - Damicelli et.al. (2021) Brain Connectivity meets Reservoir Computing: www.biorxiv.org/content/10.1101/2021.01.22.427750v1.abstract<http://www.biorxiv.org/content/10.1101/2021.01.22.427750v1.abstract> Check it out and any feedback/suggestions/bug reports are more than welcome (simply open an issue: https://github.com/fabridamicelli/echoes/issues) All the best, Fabrizio

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World wide VVTNS series (fifth season): Wednesday, May 28, 2025, at 11:00 am EDT| Nischal Mainali, ELSC, The Hebrew University
by David Hansel May 25, 2025

May 25, 2025

[image: VVTNS.png] https://www.wwtns.online <https://streaklinks.com/A9c7PbbpKY7PxB6PaAJWGD3-/https%3A%2F%2Fwww.wwtns.on…> - on twitter: wwtns@TheoreticalWide You are cordially invited to the lecture Nischal Mainali ELSC, The Hebrew University Mathematical regularities of irregular hippocampus place codes The lecture will be held on zoom on Wednesday, May 28, 2025, at *11:00 am EDT * To receive the link: https://www.wwtns.online/register-page *Abstract: *Measurements from hippocampal place cells in small enclosures have led classical view of highly stereotyped neural tuning functions with smooth, unimodal tuning fields that uniformly tile the environment. However, recent experiments conducted in large spaces across multiple species have revealed a much more irregular neural code than suggested by the classical view. Indeed, place cells in large environments typically fire in multiple locations, and the multiple firing fields of individual cells, as well as those of the entire population, vary considerably in size and shape. We recently showed that a simple mathematical model, wherein firing fields are generated by thresholding realizations of a random Gaussian process, accounts for the statistical properties of place fields in precise quantitative detail. This model captures the observed statistics of field sizes and positions and generates new quantitative predictions on field shapes and topologies. Moreover, these statistics are universal across species, but sensitive to the size and dimensionality of the environment. We quantitatively verified these predictions using multiple recent datasets from bats and rodents in one, two, and three dimensions, across both small and large environments. Collectively, these findings imply that common mechanism underlie the diverse statistical features observed in different experiments and suggest that synaptic projections to CA1 are predominantly random. *About VVTNS : Launched as the World Wide Theoretical Neuroscience Seminar (WWTNS) in November 2020 and renamed in homage to Carl van Vreeswijk in Memoriam (April 20, 2022), Speakers have the occasion to talk about theoretical aspects of their work which cannot be discussed in a setting where the majority of the audience consists of experimentalists. The seminars, **held on Wednesdays at 11 am ET,** are 45-50 min long followed by a discussion. The talks are recorded with authorization of the speaker and are available to everybody on our YouTube channel.* ᐧ

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Open PhD positions in the Institute of Machine Learning and Neural Computation at TU Graz
by Ozan Özdenizci May 25, 2025

May 25, 2025

Dear all, We have two open PhD positions in the Institute of Machine Learning and Neural Computation at Graz University of Technology, Austria. The candidates will join my research group with a focus at the intersection of AI safety and resource-efficient machine learning. These positions will be part of the Bilateral AI Cluster of Excellence program funded by the Austrian Science Fund, and candidates will be working in collaboration with our partner institutes JKU Linz, AAU Klagenfurt, ISTA, TU Vienna, and WU Vienna. For more information and details on how to apply: https://www.tugraz.at/institute/iml/institute/open-positions/bilai-jobs Best regards,  Ozan Özdenizci -- Dr. Ozan Özdenizci Assistant Professor Institute of Machine Learning and Neural Computation Graz University of Technology Inffeldgasse 16b/I, 8010 Graz, Austria

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Webinar for (soon-to-be) postdocs in computational neuroscience 3 June 11 am/5 pm CEST
by Sacha van Albada May 24, 2025

May 24, 2025

In the context of the Henriette Herz Scouting Programme of the Humboldt Foundation, I have a postdoc position available in the field of computational neuroscience. As a low-threshold introduction that does not immediately require a formal application, I am organizing two webinars on Tuesday 3 June, one at 11 am CEST and one at 5 pm CEST, where a colleague and I will briefly present our work and institute, followed by an `Ask Me Anything’ session where my group members and I answer questions. For potential attendees to decide if this is of interest to them, some keywords describing my research are: spiking network models based on anatomical and physiological data, large-scale simulations of cerebral cortex, mean-field theory, comparison with electrophysiological data. The precise research topic can be jointly decided. The candidate should not have previous links to Germany in terms of citizenship, studies, or research stays. Also those in the final stages of their PhDs are welcome. The funding period is 2 years for those who defended the PhD less than 4 years ago and 18 months for those who defended 4-12 years ago. I encourage you to register for internal planning purposes: 11 am CEST session: please register at https://events.hifis.net/event/2649/ and dial in at https://uni-koeln.zoom.us/j/93354865935?pwd=XaRxMWaWObqQJnCNEfmWxEuS1gKovn.1 5 pm CEST session: please register at https://events.hifis.net/event/2674/ and dial in at https://uni-koeln.zoom.us/j/96811002333?pwd=7mdYFayNSsmulys5GVN5Jn2j2jWxwL.1 Hoping to meet/see many of you there! Sacha van Albada -- Prof. Sacha Jennifer van Albada Institute for Advanced Simulation (IAS-6) Computational and Systems Neuroscience Jülich Research Centre Jülich, Germany Tel. +49 2461 61-96808 Mobile +49 170 2352748 Fax +49 2461 61-9460 Computational Neuroanatomy Institute of Zoology University of Cologne Cologne, Germany Tel. +49-221-470-3829 Fax +49-221-470-4889 ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Jülich GmbH 52425 Jülich Sitz der Gesellschaft: Jülich Eingetragen im Handelsregister des Amtsgerichts Düren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Stefan Müller Geschäftsführung: Prof. Dr. Astrid Lambrecht (Vorsitzende), Dr. Stephanie Bauer (stellv. Vorsitzende), Prof. Dr. Ir. Pieter Jansens, Prof. Dr. Laurens Kuipers ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------

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WashU CTCN Postdoc Fellows
by Goodhill, Geoffrey May 24, 2025

May 24, 2025

POSTDOCTORAL FELLOWSHIPS AVAILABLE AT WASHINGTON UNIVERSITY IN ST LOUIS The Center for Theoretical and Computational Neuroscience (ctcn.wustl.edu) at Washington University in St Louis invites applications from outstanding Postdoctoral Fellows to work at the interface between theoretical and experimental neuroscience labs at WashU. Deadline for applications is July 1st 2025. The CTCN is a joint initiative between the Schools of Medicine, Engineering, and Arts and Sciences, and provides a hub for neuroscientists to collaborate with mathematicians, physicists and engineers to find creative solutions to some of the most difficult problems currently facing neuroscience and artificial intelligence. Each CTCN Postdoctoral Fellow is based in at least two labs, but also has the opportunity to seek out new collaborations which help build new connections within the WashU community. We are looking for people with drive, independence and outstanding prior achievement, who are committed to leveraging interdisciplinary collaboration to drive forward the field of theoretical and computational neuroscience. Washington University in St Louis is ranked in the top 10 worldwide for Neuroscience and Behavior. Salary for CTCN Fellows is significantly above standard NIH postdoc rates, and funds for conference travel are included. In addition, WashU offers excellent benefits and comprehensive access to career development, professional and personal support. The St Louis metropolitan area has a population of almost 3M and is rich in culture, green spaces and thriving music and arts scenes, with a highly accessible cost of living. For more details on this prestigious Fellowship opportunity, including how to apply, please see https://ctcn.wustl.edu/postdoc-fellows Professor Geoffrey J Goodhill CTCN Director Washington University School of Medicine 660 S. Euclid Avenue St. Louis, MO 63110 g.goodhill(a)wustl.edu<mailto:g.goodhill@wustl.edu> https://neuroscience.wustl.edu/people/geoffrey-goodhill-phd

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Interesting event: Meeting of the Minds: Western Science Meets Eastern Wisdom
by Thijs Hoedemakers_Werk May 23, 2025

May 23, 2025

Dear members of Comp-neuro, There is an event which might be of interest (see description below). Kind regards, Thijs __________________________________ Meeting of the Minds: Western Science Meets Eastern Wisdom On Friday, June 13, science and Buddhist wisdom come together in an inspiring dialogue between Prof. Dr. Heleen Slagter and Lama Jigmé Namgyal. Prof. Slagter, known for her groundbreaking research on attention, consciousness, and the effects of meditation on the brain, will share her scientific insights into how the mind works and how contemplative practices like meditation can transform awareness. Lama Jigmé Namgyal, an authentic Tibetan Buddhist teacher, meditation instructor, and end-of-life guide, has dedicated his life to studying the human mind and meditation. He will reflect on scientific findings through the lens of the centuries-old Tibetan wisdom tradition. This "Meeting of the Minds" promises a captivating dialogue where Western science and Eastern wisdom meet, complement each other, and at times challenge one another. Attendees will have a unique opportunity to explore how these different perspectives on consciousness, the mind, and human potential can enrich each other through a respectful exchange of ideas. There will be opportunities for audience interaction, making the experience both engaging and educational. The Speakers Prof. Heleen Slagter, a leading cognitive neuroscience researcher, is known for her work on the neural basis of core cognitive functions such as attention and their plasticity. Her research focuses on how the brain selects, suppresses, and processes information, and how practices like meditation can enhance these mechanisms. Meditation promotes greater awareness, adaptability, and cognitive flexibility, and Prof. Slagter will explain the scientific background behind these changes. Lama Jigmé Namgyal’s expertise in Tibetan Buddhist philosophy and meditation provides a spiritual perspective in this scientific conversation. For years, he has studied the transformative power of the mind from a Tibetan Buddhist viewpoint, where mindfulness, meditation, and the understanding of impermanence contribute to clarity and inner peace. His experience in guiding people through the dying process offers unique insights into the continuity of consciousness and the Tibetan view of life after death. This evening offers a fascinating exchange between two disciplines—neuroscience and Tibetan Buddhist wisdom—that can deepen our understanding of the human mind and consciousness. Practical Information (Temple & Online) * Date: Friday, June 13 * Time: Doors open at 19:00, Dialogue from 19:30 to 22:30 (with a short break) (CET) * Location: Phuntsok Chö Ling, Oostkousdijk 17B, 3024 CL Rotterdam * Online: Online participation also available * Price: €25 (non-members), €20 (members) (Temple & Online) * Registration link: click here<https://my.phuntsokcholing.org/shop/event?wsID=259>

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Open PhD positions in Barcelona
by Diego Vidaurre May 22, 2025

May 22, 2025

Dear all, I am opening two PhD positions in Barcelona. These will be to work at the intersection between machine-learning methods development, computational neuroscience and clinical applications. The first project has a focus on how we can integrate across multiple sources of data to effectively model disease trajectories of neurodegeneration. The second will exploit primarily brain data to model disease networks and comorbidity. Please see more details here: https://www.crm.cat/call/89/phd-student-ref-2025-009-p04632-/107/ https://www.crm.cat/call/88/phd-student-ref-2025-008-p04632-/105/ Feel free to get in contact informally, and please disseminate Many thanks. d

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Epilepsy Workshop - OCNS 2025
by Guillaume Girier May 21, 2025

May 21, 2025

Computational Strategies in Epilepsy Modeling and Seizure Control Workshop CNS*2025 in Florence, Italy on July 08-09, 2025 We are happy to announce our Epilepsy workshop at the 34th Annual Computational Neuroscience Meeting in Florence. The event will take place on the morning of July 8th and all day of July 9th. To participate, you must be registered for at least the workshops on the organizer's website: https://www.cnsorg.org/cns-2025. For presentation abstracts and workshop schedule see: https://brady.cs.cas.cz/ocns-epilepsy-workshop. *Abstract* Epilepsy remains a complex neurological condition, necessitating innovative approaches to understanding and mitigating seizure activity. This workshop is designed to bring together computational neuroscientists and researchers with experimental and clinical background to explore cutting-edge strategies in epilepsy modeling and seizure control. For the general content structure, we plan to start from a modeler's perspective and then progressively move towards more data-driven approaches. The first session will explore seizure mechanisms through biophysical and neural mass models at different temporal and spatial scales, investigating, among others, ionic dynamics and network plasticity. It aims to understand seizure initiation, progression, and duration. The second session will focus on the application of computational models to EEG data recorded in epileptic patients. First, it will discuss the promising advances in seizure monitoring using wearable devices and long-term EEG recordings, particularly focusing on the use of data features inspired by concepts derived from mathematical modeling in epilepsy. Then, it will move on to advanced parameter inference methods to tailor models to individual data samples in order to provide mechanistic insight. The third session will examine stimulation-based strategies to terminate or prevent seizures. There will be a focus on recent advancements in closed-loop and low-frequency electrical stimulation to control seizures. On top of model-based approaches, this session will also include the clinical perspective on stimulation treatment and data-driven studies. *Our speakers are:* - *Piotr Suffczynski*, *Department of Biomedical Physics, University of Warsaw, Poland* - *Elif Köksal-Ersöz*, *Centre de Recherche en Neurosciences de Lyon - Inserm / CNRS, France* - *Louisiane Lemaire*, *MathNeuro team, University of Montpellier, France* - *Viktor Sip*, *Institut de Neurosciences des Systèmes, Aix-Marseille Université, INSERM, France* - *Brian Litt*, *Department of Neurology and Bioengineering, University of Pennsylvania, Philadelphia, USA* - *Christian Meisel*, *Department of Neurology and Berlin Institute of Health, Universitätsmedizin Berlin, Germany* - *Isa Dallmer-Zerbe*, *Institute of Computer Science of the Czech Academy of Sciences, Czech Republic* - *Dominic Dunstan*, *Department of Mathematics & Statistics, University of Exeter, Exeter, United Kingdom* - *Levin Kuhlmann*, *Department of Data Science and AI, Faculty of Information Technology, Monash University, Australia* - *Guillaume Girier*, *Institute of Computer Science of the Czech Academy of Sciences, Czech Republic* - *Matthew Szuromi*, *Boston University, USA* - *Laila Weyn*, *Department of Information Technology (INTEC), Ghent University/IMEC, Belgium* - *Daria Nesterovich Anderson**, **Faculty of Engineering, University of Sydney, Australia* We will be delighted to welcome you. GIRIER Guillaume, Postdoc Researcher, Complex networks and Brain Dynamics Group COBRA project: http://cobra.cs.cas.cz BRADY project: https://brady.cs.cas.cz/ girier(a)cs.cas.cz | *Personal website <https://sites.google.com/view/guillaumegirier/>*

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CompSysBio2025: Advanced Lecture Course on Computational Systems Biology - Aussois (FR), 5-10 October 2025
by Anton Crombach May 19, 2025

May 19, 2025

We are excited to announce the 5th Advanced Lecture Course on Computational Systems Biology which will be held between October 5-10, 2025 ( [ https://project.inria.fr/compsysbio2025/ | https://project.inria.fr/compsysbio2025/ ] ) at Aussois (France). Pre-registrations are open and abstracts may be submitted. The main Course emphasis is methodological. One goal is to illustrate the wealth and diversity of Systems Biology issues for scientists from Computer Science, Mathematics and Physics. Another goal is to allow biologists motivated by Systems Biology to go deeper into methodological issues in order to facilitate their contacts with scientists from the formal sciences. Sessions are preferentially organized around methodological issues: multi-scale and spatio-temporal modeling, genetic and molecular networks, dynamical and stochastic systems, machine learning and AI for systems biology, with a constant eye on biological relevance ( [ https://project.inria.fr/compsysbio2025/program/ | https://project.inria.fr/compsysbio2025/program/ ] ). This will be complemented by blackboard teaching and hands-on sessions in parallel classes bearing on specific topics or methods ( [ https://project.inria.fr/compsysbio2025/blackboard-teaching-and-computer-pr… | https://project.inria.fr/compsysbio2025/blackboard-teaching-and-computer-pr… ] ). The Course will be an opportunity for participants to interact directly with 23 prominent scientists ( [ https://project.inria.fr/compsysbio2025/invited-speakers/ | https://project.inria.fr/compsysbio2025/invited-speakers/ ] ) in this rapidly growing field. The conference center is located in a lovely authentic village, Aussois, nestled in the heart of the French National Park of Vanoise, a huge and beautiful natural space where flora and fauna are protected, located in the French Alps. In order to facilitate casual interactions during the conference, there will be time for hiking in the afternoon to discover such wonderful landscape. Participants are strongly encouraged to submit an abstract of their current work to be presented as a poster in order to facilitate scientific interactions. Some abstracts will be selected for short talks by the Scientific Committee. Fellowships are available for students and will be awarded to cover registration fees on the basis of the submitted abstract. The School is free of charge for CNRS employees (researchers, PhD students, postdocs, engineers, etc.). Please spread the word to anybody that might be interested in CompSysBio2025 ! Best regards The Organisation Committee of CompSysBio2025 CompsysBio2025 is sponsored by CNRS, CECAM, LBMC, PEPR Maths-Vives, PEPR Cell-ID, GDR BIMMM and Labex Persyval-Lab Key dates Abstract submission until July 31st 2025 Registration until August 31st 2025

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World wide VVTNS series (fifth season): Wednesday, May 21, 2025, at 11:00 am EDT| Alexei Koulakov, Cold Spring Harbor Laboratory
by David Hansel May 18, 2025

May 18, 2025

With correct date ------------ [image: VVTNS.png] https://www.wwtns.online <https://streaklinks.com/A9c7PbbpKY7PxB6PaAJWGD3-/https%3A%2F%2Fwww.wwtns.on…> - on twitter: wwtns@TheoreticalWide You are cordially invited to the lecture Alexei Koulakov Cold Spring Harbor Laboratory From neurons to Newtons: Brain evolution as a machine learning problem The lecture will be held on zoom on Wednesday, May 21, 2025, at *11:00 am EDT * To receive the link: https://www.wwtns.online/register-page *Abstract: *We have entered a golden age of artificial intelligence research, driven mainly by the advances in the artificial neural networks over the last several decades. Applications of these techniques—to machine vision, speech recognition, autonomous vehicles, natural language, and many other domains—are coming so quickly that many observers predict that the long-elusive goal of “Artificial General Intelligence” (AGI) is within our grasp. However, we still cannot build a machine capable of building a nest, stalking prey, or loading a dishwasher. I will describe how evolution may have shaped the algorithms that the brain is using to solve some of these challenging problems. *About VVTNS : Launched as the World Wide Theoretical Neuroscience Seminar (WWTNS) in November 2020 and renamed in homage to Carl van Vreeswijk in Memoriam (April 20, 2022), Speakers have the occasion to talk about theoretical aspects of their work which cannot be discussed in a setting where the majority of the audience consists of experimentalists. The seminars, **held on Wednesdays at 11 am ET,** are 45-50 min long followed by a discussion. The talks are recorded with authorization of the speaker and are available to everybody on our YouTube channel.* ᐧ -- *Il n'y a ni obligation ni pression à traiter ou répondre à ce mail en dehors des heures de travail* "В каждой шутке есть доля шутки" 'Life is good ..' (Carl van Vreeswijk, 1962-2022) --------------------------------------- David Hansel Directeur de Recherche au CNRS Co-Group leader Cerebral Dynamics Plasticity and Learning lab., CNRS 45 rue des Saints Peres 75270 Paris Cedex 06 Tel (Cell): +33 607508403 - Fax (33).1.49.27.90.62 *CONFIDENTIALITY AND PRIVACY NOTICE:* *This message and the documents that might be attached, are addressed exclusively to their(s) recipient(s) and may contain privileged or confidential information. The access to this information by people other than those designated is not authorized. If you are not the indicated recipient, you are notified that the use, disclosure and / or copying without authorization is prohibited under current legislation. If you have received this message in error, please kindly inform the sender immediately and proceed to its destruction.* ᐧ

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Senior Research Associate - University of Oxford - Multiphysics Modeling of Brain Health
by Johannes Weickenmeier May 18, 2025

May 18, 2025

Dear all, We are hiring a Senior Research Associate in Multiphysics Modeling of Brain Health at the University of Oxford. In this role, you will contribute to our work on predicting brain health outcomes across the lifecycle. The project aims to i) identify physiological manifestations and physics-based biomarkers that allow to differentiate between healthy and accelerated brain aging; ii) create and validate multiphysical constitutive models of cortical tissues degeneration during aging and injury; iii) utilize longitudinal medical image data to infer brain aging and injury mechanisms; and iv) study the potential relationship between exposure to head impacts and the development of neurodegenerative diseases such as Alzheimer's, Parkinson's and related dementias later in life. Join our growing team and take on responsibility in leading, devising, coordinating, and supervising research projects, establishing collaborations with project partners, mentoring junior researchers and students, and applying for funding to grow our research program. This is a 2-year funded position with the possibility to extend. Application deadline is 16-June-2025. More information is available here: LINK<https://my.corehr.com/pls/uoxrecruit/erq_jobspec_version_4.display_form?p_c…> Please don’t hesitate to contact me with any questions: Johannes.weickenmeier(a)eng.ox.ac.uk<mailto:Johannes.weickenmeier@eng.ox.ac.uk> More information about the group: http://weickenmeierlab.com<http://weickenmeierlab.com/> Looking forward to hearing from you, Johannes Weickenmeier ________________________________________________________ Johannes Weickenmeier, PhD Associate Professor Department of Engineering Science University of Oxford phone: +44-1865-617714 pronouns: he/him/his Soft Tissue Biomechanics: www.weickenmeierlab.com<http://www.weickenmeierlab.com/>

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Call for Abstracts – CoBrain Satellite @ CCS 2025, Siena, Italy
by Marilyn Gatica May 18, 2025

May 18, 2025

Dear all, We are pleased to announce the CoBrain Satellite: Complexity in the Brain, which will be held at the Conference on Complex Systems 2025 (CCS 2025) on September 3rd, 2025, in Siena, Italy. The CoBrain satellite aims to bring together researchers from neuroscience, complex systems, and related fields to explore complexity in brain dynamics, structure, and function. This one-day event's topics include: complex network models of brain connectivity, information theory applied to neural systems, emergent dynamics in neural populations, multi-scale approaches to brain complexity, computational neuroscience, and complex systems. *Confirmed keynote speakers:* Petra Vertes – University of Cambridge, UK. Michele Nardin – HHMI Janelia Research Campus, USA. Giulio Pergola – University of Bari Aldo Moro, Italy. Jaroslav Hlinka – Czech Academy of Sciences, Czech Republic. We are now accepting *abstract submissions for contributed talks <https://kgatica.github.io/CCS2025-CoBrain/#call-section>*. Submissions from underrepresented groups are especially encouraged. Please also ensure you register for CCS 2025 to attend the workshop. For more information and updates, visit our website <https://kgatica.github.io/CCS2025-CoBrain/>. We hope you will join us there! *Organising Committee* Nicola Pedreschi – University of Bari (Chair) Samy Castro – University of Strasbourg (Chair) Jesseba Fernando – Northeastern University Boston (Chair) Marilyn Gatica – Northeastern University London (Chair)

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Scientific Reports' "Illusions of the Mind" Collection: Final Submission Deadline extended to August 1st, 2025
by smart＠neuralcorrelate.com May 16, 2025

May 16, 2025

Scientific Reports: Call for Papers - Illusions of the Mind <https://www.nature.com/collections/cjaajgjfgf> Collection (Final Extended Deadline: August 1st, 2025). Dear Colleagues, Scientific Reports is currently welcoming submissions of original research to a Collection on Illusions of the Mind <https://www.nature.com/collections/cjaajgjfgf> . The Collection is now open for manuscript submissions. An illusion is an inaccurate perception of a real external object, indicating a sensory or cognitive distortion. Illusions might be experienced by anyone, but they might also be prevalent in individuals with certain neurological or psychiatric conditions (e.g., schizophrenia). Thus, their investigation can provide useful insights into our understanding of the neural processes underlying perception and cognition. This Collection welcomes original research articles in the areas of Psychology, Psychiatry, and Neuroscience, reporting empirical studies on Illusions of the Mind. Submissions will be considered through August 1st, 2025, at this link <https://author-welcome.nature.com/41598> . All manuscripts submitted to a Collection are assessed according to the standard Scientific Reports editorial criteria and peer review process and are subject to all <https://www.nature.com/srep/journal-policies/editorial-policies> standard journal policies. The editors for this Collection are: Alexander De Foe, PhD <mailto:alexander.defoe1@monash.edu> , Stephen Macknik, PhD <mailto:Stephen%20Macknik%20%3csmacknik@gmail.com%3e> & Susana Martinez-Conde, PhD <mailto:Martinez-Conde%20Susana%20%3csmart@neuralcorrelate.com%3e> . Please feel free to share this call with your colleagues and collaborators. Thank you for your interest, Susana Martinez-Conde ----------------------------------------------------------------- Susana Martinez-Conde, PhD Professor Ophthalmology/Neurology/Phys&Pharm SUNY Downstate Health Sciences University 450 Clarkson Avenue Brooklyn, NY 11203

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PhD opportunity at ETIS lab (Parisian region)
by Elisa MASSI May 16, 2025

May 16, 2025

Dear all, we are looking for PhD candidates on the topic of “ Leveraging Synaptic and Structural-Network Properties for Memory Formation in the Hippocampus with Spiking Neural Models ” at ETIS lab at CY Cergy Paris University (Parisian region), France. Deadline is the 31st of May. For applications and more information, please contact Prof. Thanos MANOS (thanos.manos[(a)]cyu.fr) and me (elisa.massi[(a)]ensea.fr) Best wishes, Elisa -- Elisa MASSI Assistant professor (Maîtresse de conférence) ETIS Lab -- CY Cergy Paris Université, France

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Postdoctoral position studying vision at experiment/computation interface
by Daniel A. Butts May 15, 2025

May 15, 2025

The laboratories of Bevil Conway (at NIH) and Dan Butts (at University of Maryland) are seeking a brilliant postdoc to study high-acuity vision, combining large-scale electrophysiology and "deep" computational modeling. The position is split between the labs, and involves both experimental neurophysiology and data-driven computational models and analyses. Our labs are in the Washington DC area (about 30-min apart) and accessible on the metro from downtown. Prior experience (broadly speaking) is recommended. If interested, please email Dan Butts (dab(a)umd.edu) with your CV and brief research statement. :Dan For more info: https://neurotheory.umd.edu/ https://www.nei.nih.gov/research/research-labs-and-branches/we-are-nei-intr…

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[Jobs] PhD positions in Switzerland on generative modelling using spiking networks
by Phil Garner May 15, 2025

May 15, 2025

Dear Colleagues, Funded by the Swiss National Science Foundation, I have openings for two PhD candidates working here at Idiap Research Institute in the general area of generative modelling using spiking networks. The project will follow two related threads: In a first thread, we will investigate the mathematical relationship between spiking and the diffusion that is common for current generative models. In a second thread, we will investigate the interface between the (binary) spikes and the continuous signals normally required for the generative applications. The posts are fully funded for four years. Candidates will register at EPFL for the academic side of the position, and will be based in Martigny in the Swiss alps. The link for the application: https://careers.werecruit.io/fr/idiap/offres/phd-positions-in-generative-mo… Other positions at Idiap with a cool video: https://www.idiap.ch/en/careers Sincerely, -- Phil Garner http://www.idiap.ch/~pgarner

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Neurophysics Master at Donders Institute, Radboud University Nijmegen
by Francesco Battaglia May 14, 2025

May 14, 2025

Dear colleagues, I would like to point your attention to our renovated Master's program in Neurophysics at Radboud University Nijmegen. The program is hosted within the Donders Institute for Brain, Cognition and Behavior and is an ideal setting for students with a Physics, exact sciences background who wish to learn about the brain and pursue a career in brain research and neurotechnology. Please see below for more info and contacts, or download our brochure here https://www.dropbox.com/scl/fi/pl3g19qetscdf5t317evm/Neurophysics_master_fl… Best regards, Francesco Prof. Dr. Francesco P. Battaglia Principal Investigator Neuronal Networks of Memory Lab Donders Centre for Neuroscience Heyendaalseweg 135 6525AJ Nijmegen - The Netherlands francesco.battaglia(a)donders.ru.nl fpbattaglia(a)gmail.com Post address: P.O. box 9010 internal Mailbox 66 6500GL Nijmegen The Netherlands *Neurophysics master at Radboud University and the Donders Institute, Nijmegen, Netherlands* - Study the brain and artificial neural networks through the lens of mathematical modeling and physics. - This 2-year masters—unique in Europe—provides a rigorous theoretical foundation in neural systems using methods from experimental physics, machine learning, and computational modelling. - Advances in network theory—illustrated by recent physics Nobel Prizes (Hinton, Hopfield, Parisi)— and brain imaging technologies are expanding research opportunities in this developing field. - Open to students from physics, science, or related backgrounds (computer science, mathematics, engineering), and awards a master degree in physics. All courses are taught in English. *Curriculum * - Courses in Computational Neuroscience, Machine Learning, Theory of Brain Machine Interfaces, Neurobiophysics, Theory of Complex Systems, Neural Data Analysis, and many more. - By choosing Data Science electives, the master can include an 18 EC Data Science Minor. - Many elective neuroscience courses across campus (incl. Cognitive Neuroscience / AI master). *Studying at Radboud University and the Donders Institute * - Radboud University is one of Europe’s leading universities in Neuroscience (#7 at research.com) - Courses are taught by faculty from the Donders institute for brain, cognition and behavior. - The Donders institute hosts more than 100 world-class neuroscience departments, offering rich internship choices for neurophysics students. - Access to cutting-edge technology: invasive neural recordings, state-of-the-art MRI, and large-scale neurotechnology initiatives like NeurotechEU and the Dutch Brain Interface Initiative. *Career prospects * - Trains students with a quantitative, multidisciplinary background and prepares for careers in: · Neuroscience, computational neuroscience, neuroAI, physics. · Neurotechnology, neuroprosthetics, biomedical technology. · Data science, machine learning, artificial intelligence. neuromorphic computing technologies. *Learn more: www.ru.nl/masters/neurophysics <http://www.ru.nl/masters/neurophysics>* *Rosa van Heesch+31 6 50 01 04 15 <+31650010415> rosa.vanheesch(a)ru.nl <rosa.vanheesch(a)ru.nl>*

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PhD at the Center for Neuroscience Research of Lyon, France
by Elif Köksal May 13, 2025

May 13, 2025

*Multiscale brain rhythms under healthy and epileptic conditions: computational modeling insights for clinical applications* Neural activity in the brain operates across multiple scales, encompassing both spatial and temporal dynamics. In patients with epilepsy, however, cognitive impairments are often linked to disruptions in these neural mechanisms, particularly through interictal epileptiform discharges (IEDs). This project aims to uncover new insights into the link between electrophysiology and attention deficits, one of the most prevalent cognitive impairments in patients with epilepsy, by exploring the role of IEDs. The PhD candidate will develop a comprehensive neocortical population model. The model will be validated on electrophysiological signals recorded in epileptic patients, and its dynamics will be studied to detail the mechanisms of multiple timescale interactions giving rise to healthy and pathological activity. The research project is at the interface between computational, cognitive, and clinical neurosciences. The candidate will preferably have some background in applied mathematics or computational neuroscience/systems biology. Programming skills in Python and knowledge of dynamical systems are required. Knowledge in cognitive neuroscience, electrophysiology and/or EEG analysis would be an asset. The PhD fellow will join the Cophy Team <https://cophyteam.fr/> hosted at the Center for Neuroscience Research of Lyon (CRNL), France. The ideal start date is September 2025, with some flexibility. Candidates should send their CV, a motivation letter, contact information for 2-3 references and their master degree notes (if available) to Elif Köksal-Ersöz elif.koksal(a)inria.fr and Mathilde Bonnefond mathilde.bonnefond(a)inserm.fr until June 10th 2025. Related Publications: 1. Bonnefond M, Kastner S, Jensen O. Communication between Brain Areas Based on Nested Oscillations. eNeuro. 2017; 4(2). 2. Köksal-Ersöz E, Lazazzera R, Yochum M, Merlet I, Makhalova J, Mercadal B, et al. Signal processing and computational modeling for interpretation of SEEG-recorded interictal epileptiform discharges in epileptogenic and non-epileptogenic zones. J Neural Eng. 2022;19(5):055005. 3. Köksal-Ersöz E, Yochum M, Benquet P, Wendling F. eCOALIA: Neocorticalneural mass model for simulating electroencephalographic signal, SoftwareX. 2024, 28: 101924. 4. Thieux M, Jung J. *et al.* BLAST paradigm. Epilepsy & Behavior. 2019 *;* 99: 106470.

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Information theory workshop at CNS*2025 -- call for contributed talks
by Marilyn Gatica May 13, 2025

May 13, 2025

Dear all, We are pleased to announce that the *Workshop on Methods of Information Theory in Computational Neuroscience <https://kgatica.github.io/CNS2025-InfoTeory-W.io/>* <https://kgatica.github.io/CNS2025-InfoTeory-W.io/>will be held once again at the 34th Annual Computational Neuroscience Meeting (*CNS*2025 <https://www.cnsorg.org/cns-2025>* conference), in *Florence, Italy*. The workshop will be held during sessions over the last two days (*8th and 9th of July 2025*) of the main conference. Our confirmed *speakers* so far include the following: - Giovanni Petri, Northeastern University London, UK - Luca Faes, University of Palermo, Italy - Xenia Kobeleva, Ruhr University, Germany - Marilyn Gatica, Northeastern University London, UK - Maria Pope , Indiana University, USA - Daniele Marinazzo, Ghent University, Belgium - Marius Pille , Charité – Berlin University of Medicine, Germany - ... more TBA! We would like to *call for contributions* to talks. If you are interested in contributing a talk, please send a title and abstract to Marilyn Gatica ( marilyn.gatica(a)nulondon.ac.uk) and Joseph Lizier ( joseph.lizier(a)sydney.edu.au) Earlier submissions and those from female/minority speakers will be prioritised. Please pay attention to the registration for CNS*2025 (deadlines and fees), as workshop registration at least is required for attendance, and see our website <https://kgatica.github.io/CNS2025-InfoTeory-W.io/> for more details. We hope you will join us there! *Organising Committee:* Marilyn Gatica (*chair*) Joseph Lizier (*co-chair*) Abdullah Makkeh Pedro Mediano

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PhD position in Computational Neuroscience, Maastricht University, the Netherlands - application deadline 18 May
by Moerel, Michelle (MACSBIO) May 12, 2025

May 12, 2025

We're excited to announce a fully funded PhD position at the Maastricht Centre for Systems Biology and Bioinformatics (MaCSBio), Maastricht University. This PhD project will focus on computational modelling of the corticothalamic circuitry to investigate its role in auditory attention. By combining computational neuroscience, ultra-high field fMRI, and laminar intracranial EEG, you will explore how the brain selectively processes sounds. The project is co-supervised by Dr. Ryszard Auksztulewicz and Dr. Michelle Moerel, and will be carried out within an international and interdisciplinary team. We welcome applicants with a Master's degree in computational neuroscience, computer science, biomedical engineering, or a related discipline. Strong programming skills are essential; prior experience with computational neuroscience is a plus. Full details and the application portal can be found here: https://vacancies.maastrichtuniversity.nl/job/Maastricht-PhD-candidate-in-A… Application deadline: 18 May 2025 Ideal starting date: around 1 September 2025 Feel free to reach out to with any questions. [UM logo signature 2017] [cid:image002.png@01DBC327.0EB9A570] Michelle Moerel, PhD Associate Professor Maastricht Centre for Systems Biology (MaCSBio) Faculty of Science and Engineering (FSE) Faculty of Psychology and Neuroscience (FPN) B3.006, Paul-Henri Spaaklaan 1, 6229 EN Maastricht, Netherlands T +31-(0)-43-3881862 E michelle.moerel(a)maastrichtuniversity.nl<mailto:michelle.moerel@maastrichtuniversity.nl>

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World wide VVTNS series (fifth season): Wednesday, May 14, 2025, at 11:00 am EDT| Tomoki Fukai, Okinawa Institute of Science and Technology
by David Hansel May 11, 2025

May 11, 2025

[image: VVTNS.png] https://www.wwtns.online <https://streaklinks.com/A9c7PbbpKY7PxB6PaAJWGD3-/https%3A%2F%2Fwww.wwtns.on…> - on twitter: wwtns@TheoreticalWide You are cordially invited to the lecture Tomoki Fukai Okinawa Institute of Science and Technology Neural mechanisms of memory linking and replay: inhibition matters The lecture will be held on zoom on Wednesday, May 14, 2025, at *11:00 am EDT * To receive the link: https://www.wwtns.online/register-page *Abstract: *My talk will consist of three subtopics. The brain remembers episodes not in isolation but with their contextual relationships, such as spatial or temporal proximity. This is an essential feature of the brain’s memory, but the underlying mechanism is yet to be explored. Cell assemblies, or engrams, may provide neural representations for such relationships. First, I will show a class of associative memory models that encode and retrieve multiple memory contents linked by an arbitrary graph structure through experience and demonstrate the crucial role of the balance between two inhibitory subnetwork types in the flexible retrieval of relational memories. Secondly, I propose a theoretical framework to generate a cognitive map, i.e., neural representations of relationships between memory items. This framework aims at the predictive function of the hippocampus and is based on successor representations proposed for reinforcement learning. Intriguingly, the model provides a unified account for grid cells in spatial navigation and concept cells in natural language processing. Finally, I will discuss another crucial role of the hippocampal memory system, memory replay, in a spiking neural network model. Unlike the conventional associative memory models that maintain attractor memory states, this model attempts to maximize the capacity of replayed activity patterns. Our model suggests the crucial role of inhibitory plasticity in optimizing spontaneous memory replay. *About VVTNS : Launched as the World Wide Theoretical Neuroscience Seminar (WWTNS) in November 2020 and renamed in homage to Carl van Vreeswijk in Memoriam (April 20, 2022), Speakers have the occasion to talk about theoretical aspects of their work which cannot be discussed in a setting where the majority of the audience consists of experimentalists. The seminars, **held on Wednesdays at 11 am ET,** are 45-50 min long followed by a discussion. The talks are recorded with authorization of the speaker and are available to everybody on our YouTube channel.* ᐧ

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[News] Call for Applications: MSc Artificial Intelligence at the University of Plymouth
by Amir Aly May 11, 2025

May 11, 2025

Dear All * *Apologies for cross-posting** We are pleased to invite applications for our *MSc Artificial Intelligence* programme at the *University of Plymouth*. Our MSc AI programme offers a comprehensive curriculum covering key areas including *Machine Learning*, *Natural Language Processing and Large Language Models (LLMs)*, *Robotics, and others*. Designed in collaboration with industry experts, the programme focuses on developing practical, industry-ready skills alongside strong theoretical foundations. Students will benefit from hands-on projects, access to cutting-edge AI technologies, and direct preparation for impactful careers in this rapidly advancing field. 🔗 Learn more: MSc Artificial Intelligence - University of Plymouth <https://www.plymouth.ac.uk/courses/postgraduate/msc-artificial-intelligence> 📅 *Applications are open* for both *September* and *January* intakes. For further information or specific queries, please feel free to contact me directly. We look forward to welcoming the next generation of AI innovators! Kind regards Regards -------------------------------------------- *Dr. Amir Aly*, PhD, FHEA, SIEEE Lecturer in Artificial Intelligence and Robotics Programme Manager of Artificial Intelligence UK and Ireland IEEE-RAS Chapter Vice Chair Director of the Centre for Robotics and Neural Systems (CRNS) School of Engineering, Computing, and Mathematics Room A307 Portland Square, Drake Circus, PL4 8AA University of Plymouth, UK

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VIB.AI International PhD Call 2025
by pedro goncalves May 8, 2025

May 8, 2025

Dear colleagues, VIB.AI is a newly established research center of VIB, a leading life sciences institute in Belgium. Our mission is to understand fundamental biological processes (including neuroscience) through AI, machine learning, and computational modeling. The VIB.AI International PhD Call 2025 is now open. We invite applicants from around the world to join an interdisciplinary research environment at the interface of AI, computational biology, and life sciences. More details about the positions at: https://vib.ai/en/vibai-international-phd-call-2025 Best wishes, Pedro Gonçalves --------------- Pedro Gonçalves Principal Investigator at NERF, a joint research initiative by imec, VIB, and KU Leuven Associate Professor at the Departments of Computer Science and Electrical Engineering, KU Leuven Affiliated PI at VIB Center for AI & Computational Biology https://goncalveslab.sites.vib.be/en

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Call for Abstracts for the Bernstein Conference 2025
by Bernstein Conference May 8, 2025

May 8, 2025

Call for Abstracts for the Bernstein Conference 2025 is now open +++ The Bernstein Network Computational Neuroscience invites proposals for Contributed Talks and Poster Sessions at the Bernstein Conference 2025 in Frankfurt am Main. +++ ____ Bernstein Conference Each year, the Bernstein Network invites the international computational neuroscience community to the annual Bernstein Conference for intensive scientific exchange. It has established itself as one of the most renowned conferences worldwide in this field, attracting students, postdocs and PIs from around the world to meet and discuss new scientific discoveries. https://www.bernstein-conference.de/ ____ IMPORTANT DATES Bernstein Conference: September 29 – October 2, 2025 Deadlines: Contributed Talk abstract submission: June 17, 2025 at 15:00 CEST Poster Session abstract submission: July 15, 2025 at 15:00 CEST Travel Grant application: July 15, 2025 at 17:00 CEST Notification of acceptance: July 2025 ____ ABSTRACTS We invite the computational neuroscience community to submit their abstracts. Submissions may be considered for either Contributed Talks or Poster Sessions. All accepted abstracts will be published online and will be citable via Digital Object Identifiers (DOI). Further information can be found here: https://bernstein-network.de/bernstein-conference/abstract-submission/ ____ TRAVEL GRANTS To support the participation of young researchers at the Bernstein Conference, the Bernstein Network offers up to 10 Travel Grants, each endowed with 500 €. Further information can be found here: https://bernstein-network.de/bernstein-conference/early-career-scientists/t… ____ INVITED SPEAKERS Alison Barker (Max Planck Institute for Brain Research, Germany) Upinder S. Bhalla (National Centre for Biological Sciences, India) Albert Compte (Institut d’Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), Spain) Luca Mazzucato (University of Oregon, USA) Tirin Moore (Stanford University, USA) Edvard Moser (Norwegian University of Science and Technology, Norway) Katherine Nagel (NYU School of Medicine, USA) Panayiota Poirazi (Foundation of Research and Technology-Hellas (FORTH), Greece) Viola Priesemann (Max Planck Institute for Dynamics and Self-Organization, Germany) Andreas Tolias (Stanford University, USA) ____ CONFERENCE COMMITTEE Jochen Triesch (Conference Chair) Matthias Kaschube (Conference Host) Tatiana Engel (Program Chair) Tim Vogels (Program Vice Chair) Wiktor Młynarski (Workshop Chair) Katharina Wilmes (Workshop Vice Chair) & Athena Akrami, Nicolas Brunel, Alex Cayco-Gajic, Mehrdad Jazayeri, Jennifer Li, Scott Linderman, Ashok Litwin-Kumar, Ida Momennejad, Christina Savin, Andrew Saxe, Daniela Vallentin. ____ For any further questions, please contact: bernstein.conference(a)fz-juelich.de<mailto:bernstein.conference@fz-juelich.de> ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Jülich GmbH 52425 Jülich Sitz der Gesellschaft: Jülich Eingetragen im Handelsregister des Amtsgerichts Düren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Stefan Müller Geschäftsführung: Prof. Dr. Astrid Lambrecht (Vorsitzende), Dr. Stephanie Bauer (stellv. Vorsitzende), Prof. Dr. Ir. Pieter Jansens, Prof. Dr. Laurens Kuipers ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------

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