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Reminder: Valentino Braitenberg Award for Computational Neuroscience - Call for Nominations
by Kerstin Schwarzwaelder April 21, 2016

April 21, 2016

Dear Colleagues, Please let me remind you that the Bernstein Association for Computational Neuroscience<http://www.nncn.de/en/bernstein-association> invites nominations for the Valentino Braitenberg Award for Computational Neuroscience. The award is biannually presented by the Bernstein Association to a scientist in recognition of outstanding research that contributes to our understanding of the functioning of the brain. The major criterion for the award is the impact or potential impact of the recipient's research on the field of brain science. In the spirit of Valentino Braitenberg's research, special emphasis is given to theoretical studies elucidating the functional implications of brain structures and their neuronal network dynamics. The awardee receives a €5.000 prize donated by the Autonome Provinz Bozen Südtirol as well as complimentary participation (registration, travel, and hotel accomodation) in the Bernstein Conference 2016. Here, the prize is awarded together with a Golden Neuron pin badge in a special ceremony that includes the Valentino Braitenberg lecture given by the awardee. Nominations may be submitted by scientists working in the field of Computational Neuroscience and should include the following documents: - One-page laudation, in which the scientific work of the candidate is honored with regard to the award's criteria - CV and list of publications Deadline for nominations is April 30, 2016 by e-mail to an.huber(a)fz-juelich.de<mailto:an.huber@fz-juelich.de> The call for nominations can be found under the followingn URL: www.nncn.de/en/bernstein-association/valentino-braitenberg-award-for-comput…<http://www.nncn.de/en/bernstein-association/valentino-braitenberg-award-for…> For inquiries please contact an.huber(a)fz-juelich.de<mailto:an.huber@fz-juelich.de> Best regards, Andrea Huber Brösamle -- Dr. Kerstin Schwarzwälder Scientific Coordination / Management Officer Please note: Our email addresses have changed. Please use k.schwarzwaelder(a)fz-juelich.de<mailto:k.schwarzwaelder@fz-juelich.de> Bernstein Network Computational Neuroscience | Bernstein Coordination Site (BCOS) Branch Office of the Forschungszentrum Jülich at the University of Freiburg Hansastr. 9A | 79104 Freiburg, Germany phone: (+49) 0761 203 9589 mail: k.schwarzwaelder(a)fz-juelich.de<mailto:k.schwarzwaelder@fz-juelich.de> web: www.nncn.de<http://www.nncn.de> Twitter: NNCN_Germany<https://twitter.com/NNCN_Germany> YouTube: Bernstein TV<https://www.youtube.com/user/BernsteinNetwork> Facebook: Bernstein Network Computational Neuroscience, Germany<https://www.facebook.com/BernsteinNetwork/> LinkedIn: Bernstein Network Computational Neuroscience, Germany<https://www.linkedin.com/company/bernstein-network-computational-neuroscien…> ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Juelich GmbH 52425 Juelich Sitz der Gesellschaft: Juelich Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Dr. Karl Eugen Huthmacher Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender), Karsten Beneke (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt, Prof. Dr. Sebastian M. Schmidt ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------

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Postdoctoral position at NYU Abu Dhabi
by Robert Volcic April 21, 2016

April 21, 2016

The search for this position will close in a couple of weeks. If you are planning to attend the Vision Science Society meeting it may be possible to schedule an informal meeting to discuss the position in more detail. ---------------------------------------------------------- The Psychology Department at New York University Abu Dhabi is inviting applications for a fully funded postdoctoral associate position in the area of Psychology with interests in human perceptual and motor systems. The postdoctoral associate will work under the supervision of Dr. Robert Volcic (http://volcic.github.io) and will carry out behavioral studies on human multisensory perception (mainly vision and touch) and action (reaching and grasping). The lab will be equipped with a state of the art system for 3D visualization, a head tracking system, and a motion capture system for monitoring reaching and grasping movements. Moreover, the postdoctoral associate will have access to an eye movement tracker, and to fMRI and EEG facilities. Applicants must hold (or be close to completing) a Ph.D. in Psychology, Cognitive Science, Neuroscience, Biology, or related fields. Prior experience in vision/haptic/motor research is important as is programming efficiency. Applications will be accepted immediately and will be considered on a rolling basis. Please visit our website at http://nyuad.nyu.edu/about/careers/faculty-positions.html for instructions and information on how to apply. To be considered, all applicants must submit a cover letter, a curriculum vitae with full publication list, a statement of research interests, representative publications, expected date of availability, and names of two referees, all in PDF format. If you have any questions, please e-mail robert.volcic(a)nyu.edu. The preferred start date is September 1st, 2016. A later start date is possible based on the needs of the applicant. The duration of employment is for two years with the possibility to renew. This position is based in Abu Dhabi (U.A.E.). The terms of employment are competitive and include housing and other benefits. About NYUAD: New York University has established itself as a Global Network University, a multi-site, organically connected network encompassing key global cities and idea capitals. The network has three foundational degree-granting campuses: New York, Abu Dhabi, and Shanghai, complimented by a network of eleven research and study-away sites across five continents. Faculty and students will circulate within this global network in pursuit of common research interests and the promotion of cross-cultural and interdisciplinary solutions for problems both local and global. Entering its sixth year, NYU Abu Dhabi has recruited a cohort of faculty who are at once distinguished in their research and teaching. Our students are drawn from around the world and surpass all traditional recruitment benchmarks, both US and global. NYU Abu Dhabi’s highly selective liberal arts enterprise is complimented by an institute for advanced research, sponsoring cutting-edge projects across the Arts, Humanities, Social Sciences, Sciences, and Engineering. EOE/Minorities/Females/Vet/Disabled

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[jobs] Postdoc-level in Intelligent Adaptive Systems (including neural networks, nlp and robotics)
by Wermter, Stefan April 20, 2016

April 20, 2016

The Knowledge Technology Research Group at the University of Hamburg invites applications for a Research Associate (Postdoc or postdoc-level/final year PhD candidate) in accordance with Section 28 of the Hamburg Higher Education Act (Hamburgisches Hochschul- gesetz, HmbHG). The position commences on 1 July 2016 or as soon as possible and is for three years plus a three year extension option. Responsibilities: Duties include teaching and research in the knowledge technology institute. Research associates can also pursue independent research and further academic qualifications as well as acquire teaching experience. These duties are intended to promote academic achieve- ment. Therefore, at least one-third of set working hours will be made available for the associate's own academic work. Specific Duties: The successful candidate will manage the international Master Pro- gramme in the field of MSc Intelligent Adaptive Systems as well as contribute to its teaching (4hrs/teaching week). Furthermore, the candidate is expected to conduct research in the area of Knowledge Technology and Intelligent Systems. This post is open to Postdocs or postdoc-level PhD candidates. PhD candidates have the opportunity to advance their academic education through the completion of a doctoral dissertation. Requirements: Academic degree preferably in computer science qualifying the post holder to carry out the above-mentioned responsibilities. In particu- lar, an MSc or PhD in Artificial Intelligence or Computer Science is essential. Your demonstrated research interests should be in the areas of Knowledge Technology and Intelligent Systems (e.g. Neural Networks, Cognitive Robotics, Natural Language Processing, Vision, or Knowledge Representation ). You should have published papers in this intelligent systems field. We are also looking for very good com- munication skills and teamwork; a very good command of both German and English is a requirement. Experience with teaching or organisation of MSc programmes is considered an advantage. The job is remunerated at the salary level TV-L 13. The position is full-time and comprises 39 hours per week. The fixed-term nature of this contract is based upon Section 2 of the Academic Fixed-Term Labor Contract Act (Wissenschaftszeitver- tragsgesetz, WissZeitVG). The initial fixed term is three years. The contract provides for a maximum extension of another three years de- pending on the associate's achievements during the first stage. The University aims to increase the number of women in research and teaching and explicitly encourages women to apply. Equally qualified female applicants will receive preference in accordance with the Hamburg Equality Act (Hamburgisches Gleichstellungsgesetz, HmbGleiG). Severely disabled applicants will receive preference over equally qualified non-disabled applicants. In case of questions, please contact Prof. Dr. Stefan Wermter, Head of Knowledge Technology Institute or consult our website at https://www.informatik.uni-hamburg.de/wtm/. Applications should include an application letter, full curriculum vitae, pdf of best international publications, copies of degree certificates and transcripts. The application deadline is 6 May 2016. Please email applications in a single pdf file to: Ms Katja Koesters, katja.koesters(a)informatik.uni-hamburg.de *********************************************** Professor Dr. Stefan Wermter Chair of Knowledge Technology Institute Department of Computer Science, WTM, Building F University of Hamburg Vogt Koelln Str. 30 22527 Hamburg, Germany Email: wermter AT informatik.uni-hamburg.de http://www.informatik.uni-hamburg.de/~wermter/ http://www.informatik.uni-hamburg.de/WTM/ ***********************************************

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Open PhD position in Juelich, Germany: “From spike trains to whole-brain dynamics – Bottom-up and top-down processing during active vision”
by Martina Reske April 20, 2016

April 20, 2016

Dear colleagues We have an open PhD student position in our collaborative project entitled “From spike trains to whole-brain dynamics – Bottom-up and top-down processing during active vision” to fill. This project addresses the question how visual input is processed in extremely short time cycles of fixations and saccades through interaction of various cortical areas. MEG recordings from human subjects performing free viewing tasks will allow for the simultaneous observation of neuronal activities from different cortical areas during active vision. Analysis of subjects’ performance and brain activity on these visual tasks enables us to study the information flow through various cortical areas, and to identify top-down components interacting with bottom-up processes. What we expect from you: · We seek for a highly motivated candidate with curiosity and persistence · A preferable candidate will have background and strong Master degree in physics, neuroscience, electrophysiology, biology, computer science or a closely related field of natural science, preferably in the field of MEG/EEG biophysics, data acquisition and analysis, biostatistics, MEG/EEG biophysics or signal processing · Obligatory: excellent educational records in the related field, good programming and data processing skills, time series analysis and M/EEG source estimation · Substantial expertise in scientific programming (preferable languages: Python, C, C++ ) and substantial knowledge of Linux and Windows · Strong motivation to carry out neuroimaging studies utilizing MEG and to perform source and connectivity analysis · Beneficial: basic knowledge of neuroscience concepts · Ability and willingness to work independently and proactively · Confident appearance and ability to work cooperatively in an interdisciplinary environment · Good interpersonal and communication skills, structured and systematic working style · Fluent in English (spoken and written); beneficial: knowledge of German The candidate will primarily be based at the Jülich Research Center. What we offer: We offer a position in a creative and international team, themes ranging from computational neuroscience, simulation technology and multimodal imaging, see www.csn.fz-juelich.de<http://www.csn.fz-juelich.de> and <http://www.fz-juelich.de/inm/inm-4/EN/Forschung/MEG-Physik/_node.html> http://www.fz-juelich.de/inm/inm-4/EN/Forschung/MEG-Physik/_node.html. The Jülich Research Center is one of the largest research centers in Germany, with excellent scientific equipment, located on a green campus, and near the cultural centers Köln, Düsseldorf, and Aachen. The PhD position is available for 3 years. Applications, including a letter clearly motivating your application, CV, publication list, copies of university certificates, and one reference letter should be sent as a single PDF email attachment (max. 10MB) mentioning the internal reference code CSC-GID latest until May 31st , 2016, to should be sent to: Dr. Juergen Dammers (d.dammers(a)fz-juelich.de<mailto:d.dammers@fz-juelich.de>). Project leaders will be: Prof. Dr. Sonja Grün (INM-6/IAS-6), Dr. Junji Ito (INM-6/IAS-6), Dr. Jürgen Dammers (INM-4) Institute of Neuroscience and Medicine (INM-6, INM-4), Institute for Advanced Simulation (IAS-6), Jülich Research Center and JARA52425 Jülich, Germany, www.csn.fz-juelich.de<http://www.csn.fz-juelich.de> -- Dr. Martina Reske Scientific Coordinator Institute of Neuroscience and Medicine (INM-6) Computational and Systems Neuroscience & Institute for Advanced Simulation (IAS-6) Theoretical Neuroscience Jülich Research Centre and JARA Jülich, Germany Work +49.2461.611916 Work Cell +49.151.26156918 Fax +49.2461.619460 www.csn.fz-juelich.de<http://www.csn.fz-juelich.de> ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Juelich GmbH 52425 Juelich Sitz der Gesellschaft: Juelich Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Dr. Karl Eugen Huthmacher Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender), Karsten Beneke (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt, Prof. Dr. Sebastian M. Schmidt ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------

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Fully funded PhD positions: Robotics, Brain and Cognitive Sciences
by Giulio Sandini April 20, 2016

April 20, 2016

We are seeking candidates for eight fully funded PhD positions at the Italian Institute of Technology's Robotics Brain and Cognitive Sciences Department (RBCS - www.iit.it/rbcs<http://www.iit.it/rbcs> ) directed by Giulio Sandini. The fellowships give access to the PhD course "Bioengineering and Robotics" offered by the University of Genova and specifically to the "Cognitive Robotics, Interaction and Rehabilitation Technologies" Curriculum. Deadline for Applications is June 10, 2016 at noon, Italian Time. The objective of the PhD program is to form scientists and research technologists capable of working in multidisciplinary teams on projects where human factors play a crucial role in technological development and design. Robotics and neuroscience researchers in RBCS share, as a fundamental scientific objective, the study of physical and social interaction in humans and machines (www.iit.it/rbcs<http://www.iit.it/rbcs> ). More specifically the themes supported by PhD fellowships<https://www.iit.it/110-phd-program-in-biorob-cognitive-robotics-2016> in this Curriculum are part of RBCS studies on human sensorimotor, cognitive and social interaction abilities, their implementation in the humanoid robot iCub, and on the design and assessment of assistive technologies and robotic rehabilitation devices for persons with disabilities. Among the topics offered one is left open to applicant's bright ideas (see the BYO theme in the list). RBCS research facilities<http://www.iit.it/rbcs> supports our student's research activities including the realization of ad-hoc experimental set-ups and mechatronic devices. The experimental facilities include, besides the humanoid platform iCub, a fully equipped motion capture room with simultaneous electromyography recording and force-platforms, a Transcranial Magnetic Stimulation Lab, an Electrophysiology Lab for EEG recording, haptic devices for ergonomic measures of individual and dyadic interaction, robot rehabilitation devices for the upper limbs including the wrist; The ideal candidates are students with a higher level university degree willing to invest extra time and effort in blending into a multidisciplinary team composed of neuroscientists, engineers, psychologists, physicists working together to investigate brain functions and realize intelligent machines, rehabilitation protocols and advanced prosthesis. The list of the themes offered by the curriculum Cognitive Robotics, Interaction and Rehabilitation Technologies can be downloaded here: https://www.iit.it/110-phd-program-in-biorob-cognitive-robotics-2016 [PDF] Applicants are strongly encouraged to get in touch with the tutors of the specific themes before completing the submission or with Giulio Sandini. International applications are encouraged and will receive logistic support with visa issues, relocation, etc. =========================================================================== How to apply Application deadline: 10 June 2016, Noon, Italian time =========================================================================== Please note that the positions are available through the PhD course of Bioengineering and Robotics, curriculum on Cognitive Robotics, Interaction and Rehabilitation Technologies, offered jointly by IIT and the University of Genoa. The official calls are available here: https://www.iit.it/phd-school under the section "Research themes for the call for application to PhD Courses established in agreement with the Università degli Studi di Genova, XXXII cycle". Please have a look at the "tips and tricks" section of this page which contains detailed instructions on how to apply and a list of documents to be presented. The link to the on-line application page is: http://www.studenti.unige.it/postlaurea/dottorati/XXXII/ In case of problems or questions related to the application procedure, please contact: anastasia.bruzzone(a)iit.it<mailto:anastasia.bruzzone@iit.it> =========================================================================== LIST OF THEMES OFFERED (tutors within brackets) Detailed descriptions are here: https://www.iit.it/110-phd-program-in-biorob-cognitive-robotics-2016 [PDF] =========================================================================== 1. INTERACTION AND GRASP FORCE IN HANDWRITING AND DEXTEROUS ACTION (Gabriel Baud-Bovy) 2. UNTANGLING FORCES PERCEPTUALLY IN HUMAN-HUMAN PHYSICAL INTERACTION (Gabriel Baud-Bovy) 3. VISUO-HAPTIC EXPLORATION STRATEGIES FOR OBJECT RECOGNITION (Alessandra Sciutti, Francesco Rea, Giulio Sandini) 4. MAKE HUMANOIDS UNDERSTAND HUMAN ACTIONS (Alessandra Sciutti, Francesco Rea, Giulio Sandini) 5. MULTISENSORY HUMAN-ROBOT INTERACTION (Alessandra Sciutti, Francesco Rea, Giulio Sandini) 6. ROBOT TECHNOLOGIES FOR EVALUATION OF SENSORIMOTOR IMPAIRMENT AND NEUROMOTOR REHABILITATION (Jacopo Zenzeri, Prof. Pietro Morasso) 7. MOTOR SKILL LEARNING IN DYNAMIC ENVIRONMENTS (Jacopo Zenzeri, Prof. Pietro Morasso) 8. FROM SCIENCE TO TECHNOLOGY FOR VISUALLY IMPAIRED CHILDREN (Monica Gori) 9. CORTICAL MECHANISMS OF MULTISENSORY INTEGRATION IN CHILDREN AND ADULTS WITH AND WITHOUT VISUAL DISABILITY (Monica Gori, Giulio Sandini) 10. SPATIAL AWARENESS THROUGH EGOCENTRIC ON-BODY TACTILE STIMULATION (Luca Brayda, Fabrizio Leo) 11. IMPROVING ORIENTATION AND MOBILITY SKILLS IN VISUALLY IMPAIRED PERSONS BY MEANS OF PROGRAMMABLE TACTILE DISPLAYS (Luca Brayda, Fabrizio Leo) 12. BYO: BRING YOUR OWN (PROJECT) (Giulio Sandini)

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summer school on 3D displays and the Human Visual System
by Jenny Read April 20, 2016

April 20, 2016

Hello everyone, The European Training Network on Full Parallax Imaging is organising a summer Training School on 3D displays and the Human Visual System, June 27 - July 1 in Newcastle, UK. Aimed at post-graduate students and post-doctoral researchers, especially those from engineering / computing backgrounds who are working on visual displays and interested in learning more about human visual perception in order to create the best experience for viewers. Registration is £250 for 5 days. Please circulate to any students / lab members who might be interested. More information and registration here: http://www.full-parallax-imaging.eu/TS1/ Thanks, Jenny -- Jenny C. A. Read Professor of Vision Science Mobile 0756 151 6988 Institute of Neuroscience Office +44 191 208 7559 Newcastle University, Website jennyreadresearch.com NE2 4HH, United Kingdom Twitter @jcaread _______________________________________________ visionlist mailing list visionlist(a)visionscience.com http://visionscience.com/mailman/listinfo/visionlist

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Program Director Positions at NSF
by Tuller, Betty K. April 19, 2016

April 19, 2016

Two Program Officer positions are being advertised at the National Science Foundation: Cognitive Neuroscience Program Director: BCS is seeking a Program Director for the Cognitive Neuroscience program. The Cognitive Neuroscience Program aims to spur the development of highly novel theories, techniques and models directed toward enabling basic scientific understanding of a broad range of issues involving brain, cognition, and behavior. Research will provide insights into healthy functions of brain, cognition, and behavior. Additionally, the program highly values the exploration of new methodologies, utilization of the latest analytic approaches, and the convergence of cutting edge techniques for addressing basic questions about human cognition. For additional information, see:https://www.usajobs.gov/GetJob/ViewDetails/435126100?org=BCS Science of Learning Program Director: The Division of Behavioral and Cognitive Sciences (BCS) at NSF is seeking a Program Director in the Science of Learning, who could also contribute to the management of the Development and Learning Sciences Program. Over the years, the Division has successfully supported research on learning across many scales of analysis, drawing on perspectives from many fields including cognitive and behavioral sciences, social science, engineering, biology, neuroscience, mathematics and physical sciences, computer science, machines learning and artificial intelligence. Attention is now turned to planning the next phase of Science of Learning investments, vis-à-vis the Developmental and Learning Sciences program, to continue the advancement of fundamental knowledge about learning. For additional information, see: https://www.usajobs.gov/GetJob/ViewDetails/435131500?org=BCS Betty Tuller, Ph.D. Director, Program in Perception, Action, and Cognition National Science Foundation 4201 Wilson Blvd Arlington, VA 22230 Tel: 703.292.7238 Fax: 703.292.9068 1) A new Proposal and Award Policies and Procedures Guide is now available at http://www.nsf.gov/publications/pub_summ.jsp?ods_key=nsf16001 2) The PAC program has additional requirements for submission: Please go to the website at http://www.nsf.gov/funding/pgm_summ.jsp?pims_id=5686 3) Other items of potential interest to the PAC community are listed on the PAC website. NOTE: New solicitation for Integrative Strategies for Understanding Neural and Cognitive Systems: http://www.nsf.gov/publications/pub_summ.jsp?ods_key=nsf16508<http://www.nsf.gov/publications/pub_summ.jsp?ods_key=nsf16508>. Interested in serving as a Program Officer at NSF? Visit: http://www.nsf.gov/about/career_opps/rotators/microsite/<http://www.nsf.gov/about/career_opps/rotators/microsite/>

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Fully funded PhD position in Computational models of cortical sensory processing at IIT (Italy)
by Stefano Panzeri April 19, 2016

April 19, 2016

We are seeking candidates for a PhD position at the Italian Institute of Technology’s Neural Coding Laboratory ( https://www.iit.it/lines/neural-computation ) directed by Stefano Panzeri and located in Rovereto (Trento), Italy. IIT collaborates with Università degli studi di Trento and finances these positions at the PhD course in Cognitive and Brain Sciences. *Interested candidates are invited to informally approach as soon as possible Prof. Stefano Panzeri (*stefano.panzeri(a)iit.it*) by emailing their CV and briefly explaining their interest in this position. In order to formally apply to the PhD Position, candidates will then need to refer to the call published by Università degli Studi di Trento and available at the following link*: http://web.unitn.it/en/drcimec/10140/admission-doctoral-school-cognitive-an… *Deadline for formal application is 10 may 2016* Topic description: This project will develop neural network models to investigate the mechanisms by which neural circuits encode and transmit information about the sensory environment. In particular, the successful candidate will model the role of specific classes of excitatory and inhibitory neurons in shaping cortical information processing. The successful candidate will have the opportunity to interact with the collaborating IIT laboratory of Dr Tommaso Fellin, that performs neurophysiological and optogenetic experiments to test the model predictions. The applicant should have a strong background in numerate sciences, and have a propensity for interdisciplinary research. No extensive previous experience in neuroscience is needed. However, a keen interest in understanding the brain is essential.

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fully funded PhD position in Information theoretic studies of neural population coding at IIT (Italy)
by Stefano Panzeri April 19, 2016

April 19, 2016

We are seeking candidates for a PhD position at the Italian Institute of Technology’s Neural Coding Laboratory ( https://www.iit.it/lines/neural-computation ) directed by Stefano Panzeri and located in Rovereto (Trento), Italy. IIT collaborates with Università degli studi di Trento and finances these positions at the PhD course in Cognitive and Brain Sciences. Interested candidates are invited to informally approach *as soon as possible* Prof. Stefano Panzeri (stefano.panzeri(a)iit.it) by emailing their CV and briefly explaining their interest in this position. In order to formally apply to the PhD Position, candidates will then need to refer to the call published by Università degli Studi di Trento and available at the following link: http://web.unitn.it/en/drcimec/10140/admission-doctoral-school-cognitive-an… *Deadline for formal application is 10 may 2016* Topic description: Understanding how populations of neurons encode and transmit information is a prerequisite for understanding brain functions such as perception. Progresses in neural recordings technology enable scientists to monitor the activity of larger and larger number of neurons, but it is still unclear how to analyze these data to understand how groups of neurons work together. The successful candidate will develop and use tools for the analysis of large-scale simultaneous recordings of the spiking activity of cells in the cortex to understand how populations of neurons carry information. The successful candidate will have the opportunity to both develop new advanced methods and to analyze experimental data in collaboration with many experimental neuroscience laboratories. The applicant should have a strong background in numerate sciences, and have a strong propensity for interdisciplinary research. No extensive previous experience in neuroscience is needed. However, a keen interest in understanding the brain is essential.

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[jobs] Post-doc in Developmental Robotics, closing date 28th April
by Patricia Shaw April 19, 2016

April 19, 2016

Post-Doctoral Research Associate, (Fixed Term until 31 March 2018) Institute of Mathematics, Physics and Computer Science, Aberystwyth University, Wales, UK Grade 7 - £32,600 - £37,768 Closing Date: Midnight 28 April 2016 Applicants are invited to join the Robotics Laboratory for a project (entitled “Developmental Algorithms for Robotics”). The project is focusing on developmental robotic learning based on an iCub humanoid robot. This is a three year EPSRC funded project running at Aberystwyth University started March 2015, with the support of an International Scientific Advisory Board consisting of leading developmental psychologists. We wish to appoint a Post-Doctoral Research Associate who will develop models based on the psychological literature, and conduct experiments on our iCub humanoid robot. The successful candidate will have appropriate modelling skills and experience, and proven abilities in this area. Other tasks include writing scientific documents and papers, documenting experiments and writing reports, supervising a PhD student and collaborating with other researchers. Regular European travel will be involved. The project ends March 2018, with the fixed-term contract running to this date. For informal enquiries contact Patricia Shaw: phs(a)aber.ac.uk +44 (0)1970 622432. For the full job description, please visit: https://urldefense.proofpoint.com/v2/url?u=https-3A__jobs.aber.ac.uk_en_vac…

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Two positions at Boston Univ: 1.) Neural data analysis & 2.) Modeling cortical cognitive function
by Michael Hasselmo April 18, 2016

April 18, 2016

Two positions are available in the Hasselmo laboratory in the Center for Systems Neuroscience at Boston University focused on: 1.) Analysis of neurophysiological data, and 2.) Computational modeling of cortical cognitive function. Each position could be hired as either a pre-doctoral staff position or a post-doctoral research position. 1. ANALYSIS OF NEUROPHYSIOLOGICAL DATA. This position involves working with multiple ongoing neurophysiological research projects, including unit and field potential recording in awake behaving rodents, and whole cell patch recording in brain slice preparations. The ideal candidate will be able to balance research projects efficiently and work closely with others in the lab. Interest in neuroscience and background in engineering or mathematics is preferred. Experience with scientific data analysis and signal processing is essential. Programming proficiency is required. Languages of use include: MATLAB, Python, Unix, C++, MySQL, though experience is not required in each. Experience with machine learning, computational modeling, and biomedical recording hardware/software is desirable. Responsibilities: • Develop and maintain standardized analysis procedures and toolboxes for multiple experimental paradigms. • Develop software for interfacing with experimental equipment, as required. • Assist on experimental design and statistical analyses of data • Develop processing procedures for non-standard data • Compare and fit experimental results to biologically structured models. • Prepare written presentations of results • Maintain a uniform data flow and backup procedure across researchers. • Maintain and utilize MySQL databases. 2. COMPUTATIONAL MODELING OF CORTICAL COGNITIVE FUNCTION. This position involves development of cortical circuit models of cognitive function with a particular emphasis on the prefrontal cortex, building on previous research including work in the Hasselmo laboratory at Boston University. The ideal candidate will have previous experience with development of neural circuit models of the role of neocortical structures in symbolic processing and cognitive function, with programming proficiency in languages such as MATLAB and/or Python. Responsibilities: • Develop and maintain cognitive model of cortical function using neurons at different levels of detail. • Simulate behavioral function in a range of cognitive tasks. • Assist on design of experiments using fMRI and unit recording in non-human primates. • Compare and fit experimental results to biologically structured models. • Prepare written presentations of models and experimental data. If interested, please send resume, cover letter, and names of references (letters not yet required) to Prof. Michael Hasselmo at hasselmo(a)bu.edu. -- Prof. Michael Hasselmo Director, Center for Systems Neuroscience, Department of Psychological and Brain Sciences, Center for Memory and Brain, Graduate Program for Neuroscience, Boston University, 2 Cummington St., Boston, MA, 02215, USA e-mail: hasselmo(a)bu.edu, http://www.bu.edu/hasselmo

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Call for Abstracts: Bernstein Conference 2016
by Margret Franke April 18, 2016

April 18, 2016

Call for Abstracts: Bernstein Conference 2016 ************************************************************** Satellite Workshops September 20-21, 2016 Main Conference September 21-23, 2016 PhD Symposium September 23-24, 2016 ************************************************************** The Bernstein Conference started out as the annual meeting of the Bernstein Network Computational Neuroscience and has become the largest annual Computational Neuroscience conference in Europe with more than 500 international participants in recent years. This year the conference is organized by the Bernstein Center for Computational Neuroscience Berlin at the Humboldt-Universität zu Berlin. The main conference (Sep 21-23, 2016) will be accompanied by satellite workshops (Sep 20-21, 2016) and a PhD symposium (Sep 23-24, 2016). An important part of the main conference will be the two poster sessions. We are now inviting the submission of abstracts from all relevant areas. Authors of most accepted abstracts will get the chance for a poster presentation, a small number of abstracts will be selected for contributed talks during the main conference. Please note the earlier submission deadline for authors applying for a talk. All accepted abstracts will be published online and will be citable via Digital Object Identifiers (DOI). DETAILS FOR ABSTRACT SUBMISSION: Please note that the submission of an abstract does not replace the conference registration (www.bernstein-conference.de/registration) Poster space is limited and early submission is encouraged. For abstract submission visit: http://g-node.org/abstracts/bc16/ ABSTRACT SUBMISSION DEADLINES: Posters to be considered as contributed talks: June 15, 2016 Other posters: August 1, 2016 NEW THIS YEAR – TRAVEL GRANTS This year for the first time, the Bernstein Association offers Travel Grants for participation in the Bernstein Conference. Each of the 10 Travel Grants is endowed with 500 €. Please find further information under the link: www.nncn.de/en/bernstein-conference/2016/travel-grant CONFERENCE DETAILS: Conference registration starts on May 2, 2016. Early registration deadline: July 24, 2016 Hotel rooms are relatively pricy and limited due to a huge trade fair at the same time. We offer a small contingent of hotel rooms close to conference venue on the conference website. Please book by yourself. VENUE Satellite Workshops and Main Conference: Humboldt-Universität zu Berlin, Unter den Linden 6, 10117 Berlin, Germany VENUE PhD Symposium: Humboldt-Universität zu Berlin, Campus Nord, Bernstein Center for Computational Neuroscience Berlin, Philippstr. 13 Haus 6, 10115 Berlin, Germany VENUE Public Lecture: Humboldt-Universität zu Berlin, Audimax, Unter den Linden 6, 10117 Berlin, Germany, September 21, 2016, 8 pm For more information on the conference, please visit the website http://www.bernstein-conference.de We are looking forward to welcoming you in Berlin! Local organizer: Michael Brecht Program chair: Richard Kempter Managing director: Margret Franke Co-Organizers: Bernstein Coordination Site (BCOS): Andrea Huber Broesamle, Mareike Kardinal, Kerstin Schwarzwaelder -- Margret Franke Managing Director Bernstein Center for Computational Neuroscience Humboldt-Universität zu Berlin Unter den Linden 6 10099 Berlin phone: (030) 2093-9110 fax: (030) 2093-6771

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Postdoc in Warsaw - kernel-based method of electrophysiological source imaging
by Daniel Wójcik April 18, 2016

April 18, 2016

https://neuroinflab.wordpress.com/jobs/ POSTDOCTORAL POSITION IN COMPUTATIONAL NEUROSCIENCE: kESI – kernel-based method of electrophysiological source imaging The Neuroinformatics Laboratory (https://neuroinflab.wordpress.com/) at the Nencki Institute of Experimental Biology of the Polish Academy of Sciences (NENCKI, www.nencki.gov.pl) headed by Prof. Daniel Wójcik (http://www.neuroinf.pl/Members/danek) invites applications for a postdoctoral position (36 months) that will be available as part of a nationally funded project (NCN OPUS). The goal of the project is to develop and implement a new technique of source localization of specific events in neural activity, such as a seizure, from multimodal imaging data, including ECoG (strip and grid electrodes), depth electrophysiological recordings, and MRI data from humans. The method will be validated with ground truth model data and tested on clinical data obtained from epilepsy patients. The fellow will build on already existing tools and techniques developed in the lab, see especially Potworowski et al. 2012 and Ness et al. 2015. Requirements: - PhD, preferred in physics/biophysics, mathematics, computer science, electrical engineering, computational neuroscience or related fields - Strong interest in brain research - Preference for people with experience in one or more of: numerical solutions of PDEs, electrodynamics, computational neuroscience, brain imaging - Advanced programming experience, Python preferred - Exceptional motivation for scientific research (demonstrated in former education record, additional courses completed, list of publications and conferences attended, previous scientific experience, references of the candidate’s thesis advisor, letter-of-intent) - Proficiency in English Application The application should contain the following documents/information: - CV including the list of publications, scholarships and awards, list of computational projects in which the candidate participated (preferably with links to the project website/publication or the candidate’s GitHub account). - Copy of PhD diploma - The applicant should arrange for two letters of recommendation to be sent directly to Prof. Wojcik and should provide contact information (email, phone) for the two referees in the cover letter. Preferred starting time: by September 15th, 2016 but the position is open. Application deadline: We are accepting applications until the position is filled To apply or ask for further information send email to d.wojcik(a)nencki.gov.pl -- Prof. Daniel K. Wojcik Laboratory of Neuroinformatics, Head PhD Studies, Head Nencki Institute of Experimental Biology 3 Pasteur St, 02-093 Warsaw, Poland tel: (+48 22) 5892348 fax: (+48 22) 8225342 skype: danek8317 http://dwojcik.pl/ http://neuroinflab.wordpress.com/ http://orcid.org/0000-0003-0812-9872

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postdoc positions - Gatsby Computational Neuroscience Unit
by Peter Latham April 18, 2016

April 18, 2016

The Gatsby Computational Neuroscience Unit invites applications for one or more postdoctoral training fellowships in theoretical neuroscience and related areas. We are looking especially for someone with an interest and/or background in synaptic plasticity and learning. Candidates should have a very strong analytical background in physics, mathematics, statistics, or machine learning, with an emphasis on the use of Bayesian methods in neuroscience, a detailed knowledge and understanding of the literature, and a publication record in highly ranked conferences and journals. Candidates must also have a PhD in a relevant subject area by the agreed start date of the position. For additional information, and to apply, please visit http://www.gatsby.ucl.ac.uk/vacancies/TN%20Postdoc%202016/TN%20Postdoc%2020… If you have any questions, please contact Peter Latham, pel(a)gatsby.ucl.ac.uk

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Open PhD Position at the University of Exeter, UK - Modelling visuomotor coordination in People with Parkinson’s Disease
by Tsaneva-Atanasova, Krasimira April 18, 2016

April 18, 2016

I have an open PhD Positions in my group at the University of Exeter. I am looking for PhD students with quantitative background (mathematics, physics, computer science or engineering) who are interested in applying their skills in solving biomedical and/or healthcare problems. Carlota Palmer Studentships: 2. Modelling visuomotor coordination in People with Parkinson’s Disease For further details and how to apply see: http://www.exeter.ac.uk/studying/funding/award/?id=2159<http://www.exeter.ac.uk/studying/funding/award/?id=2122> Please feel free to contact me if you have any questions regarding these positions. Krasimira Tsaneva-Atanasova Professor of Mathematics for Healthcare College of Engineering, Mathematics and Physical Sciences University of Exeter Exeter, Devon, EX4 4QF, UK tel: +44 (0) 1392 723615 email: k.tsaneva-atanasova(a)exeter.ac.uk<mailto:k.tsaneva-atanasova@exeter.ac.uk> web: http://emps.exeter.ac.uk/mathematics/staff/kt298 ALTEREGO - Enhancing Social Interaction with an AlterEgo artificial agent http://www.euromov.eu/alterego/homepage

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Postdoctoral and Developer positions / Large-scale network simulator development
by Hans Ekkehard Plesser April 18, 2016

April 18, 2016

Dear Colleagues! The computational neuroscience group at the Norwegian University of Life Sciences is currently recruiting one postdoctoral-level researcher and one scientific software developer as part of our large-scale neuronal network simulator development efforts in the Human Brain Project (HBP). Our group is responsible for four tasks in the next phase of the HBP: - Massively parallel methods for network construction from rules and data - Whole brain level in silico instrumentation, services and apps - Models of brain signals - Simulator NEST as a Service Your work will focus on the first two tasks, researching concepts required to compactly specify brain-scale neuronal networks so that they are easy for the neuroscientist to review, and at the same time can be instantiated efficiently in a massively parallel fashion. You will further work on concepts that will allow domain specialists to configure complete in silico experiments on point-neuron-based whole-brain models by connecting stimulation and recording devices to specific neuron populations. We will collaborate closely with colleagues within the HBP, especially at the Institute for Neuroscience and Medicine 6, Research Center Jülich (FZJ), at the Swiss Federal Institute of Technology in Lausanne (EPFL), and at University of Oslo. Our group is a core member of the NEST Initiative. We have access to some of the world's largest supercomputers and aim to develop simulation technology that will scale to the exascale. Preferred starting date for the positions is 1 August 2016 for a period of 20 months (until 31 March 2018). For details on the positions, please see the full advertisements at https://www.jobbnorge.no/ledige-stillinger/stilling/124473/researcher-in-ne… https://www.jobbnorge.no/ledige-stillinger/stilling/124558/head-engineer-se… where you also can submit your application. For general information about working in Norway, please see https://www.nav.no/workinnorway/ Please feel free to contact me if you are interested in the positions! Hans Ekkehard Plesser -- Dr. Hans Ekkehard Plesser, Associate Professor Section Head Dept. of Mathematical Sciences and Technology Norwegian University of Life Sciences PO Box 5003, 1432 Aas, Norway Phone +47 6723 1560 Email hans.ekkehard.plesser(a)nmbu.no Home http://arken.umb.no/~plesser

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[IEEE ICCI*CC'16:] Final call for Submission: Computational Intelligence/Cognitive Informatics/Cognitive Computing @Stanford
by Yingxu Wang April 18, 2016

April 18, 2016

Dear Colleagues, The deadline for paper submission to IEEE ICCI'CC’16 (15th IEEE International Conference on Cognitive Informatics & Cognitive Computing) is April 30, 2016 (http://www.ucalgary.ca/icci_cc/iccicc-16) The Proceedings of ICCI*CC'16 will be published by IEEE CS Press. Papers accepted in ICCI*CC’16 will be indexed by EI. Extended versions of selected papers will be published in several EI or SCI indexed journals. Full papers are expected to be around 5-8 pages in IEEE double column format. Short papers (3-4 pages) that report industrial experience, case studies, work in progress, or graduate students’ research are also welcome. Paper submission site is at: https://easychair.org/conferences/?conf=iccicc2016. The conference will be featured by four keynote speeches such as those of: * Prof. Lotfi A. Zadeh with UC Berkeley * Prof. Bernard Widrow with Stanford University The keynotes highlight cutting-edge theories and novel technologies for cognitive systems and computational intelligence inspired by the brain. We look forward to meeting you at Stanford University during Aug. 22-23, 2016. Sincerely, IEEE ICCI*CC'16 Co-Chairs GENERAL CO-CHAIRS: Bernard Widrow (Stanford) and Yingxu Wang (UofC, Canada) PROGRAM CO-CHAIRS: Newton Howard (MIT) and Kostas Plataniotis (Univ. of Toronto, Canada)_______________________________________________ This message was sent to all subscribers of ieeeicci13-L To unsubscribe, see instructions at: http://www.ucalgary.ca/it/email/mailman E-mail: ieeeicci13-L(a)mailman.ucalgary.ca Homepage: http://mailman.ucalgary.ca/mailman/listinfo/ieeeicci13-l

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PhD position: neuronal self-organization in the retina
by Roman Bauer April 16, 2016

April 16, 2016

Dear all, applications are invited for a fully-funded three-year PhD student position at the Institute of Neuroscience at Newcastle University, Newcastle upon Tyne (UK). The successful candidate will work under the supervision of Dr Roman Bauer and Dr Evelyne Sernagor, and do computational modeling as well as wet-lab work on neuronal development and self-organization in the retina. There is also the possibility for the student to be involved in a collaborative project with CERN openlab and Intel as a project partner. Applicants should be highly motivated and should have a strong background in physics, computer science, neuroscience or a related disciplince. Good computational skills and experience in a major programing language such as C++ or Java are required. The Institute of Neuroscience (IoN) is a well-established research institute integrating over 75 principal investigators, and was ranked in UK top 10 for overall quality of research. The university's Faculty of Medical Sciences, of which IoN is part of, is ranked in the top 50 worldwide for biomedical and health sciences in the Leiden Ranking. UK/EU and International students are eligible to apply, but international students will be required to make up the difference between the UK/EU fees and international fees. The deadline is May 13th, 2016. More details on this job posting can be found here: http://www.ncl.ac.uk/postgraduate/funding/sources/allstudents/12mrea.html Best regards, Roman Bauer

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Call for Abstracts at NTS Conference, Deadline April 29, 2016
by Camille Grigsby-Rocca April 16, 2016

April 16, 2016

Dear Colleagues, The Scientific Committee of Neuromodulation: The Science Conference is pleased to announce an extension to the conference Call for Abstracts, now due April 29, 2016, for our upcoming neuroscience summit, slated for May 25-29, 2016 in San Francisco. Submissions are open for the Neurovations Awards for Best Posters in Neuromodulation at NTS Conference, for abstracts presenting original basic or clinical scientific research or updates in brain/computer/machine interfacing, biomedical engineering, neuroscience and neuromodulation. See the Abstract Submission Guidelines here<http://ntsconference.com/neurovations-award/>. The top three posters from all specialties including brain/computer/maching interfacing, bioengineering, neuromodulation and neuroscience will win an award for scientific excellence, which will be presented on the final day of the conference. Prizes to the top three posters selected will be awarded in amounts of $3000, $2000, and $1000, respectively. All posters must be attended by a registered attendee of the conference. View the program at ntsconference.com<http://ntsconference.com/> - conference co-chairs Elliot Krames, MD, Eric Grigsby, MD, MBA and Peter Staats, MD, with the support of the Conference Scientific Committee have designed five days of world-class scientific content. The program includes lectures and Q&A panels, led by over 60 of the world's preeminent scientists in brain/computer/machine interfacing, neuromodulation, optogenetics, bioengineering, functional electrical stimulation (FES), spinal cord stimulation (SCS), and more. Early registration rates are available through April 21. Discounted lodging rates at the Hyatt Regency Embarcadero, San Francisco, are available until April 29. Abstracts will be accepted through April 29. CME credits are available, with 18.50 AMA PRA Category 1 Credits(tm). VIEW THE FULL PROGRAM HERE<http://ntsconference.com/wp-content/uploads/2015/04/NTS_agenda_040516.pdf>. ________________________________ This activity has been planned and implemented in accordance with the accreditation requirements and policies of the Accreditation Council for Continuing Medical Education (ACCME) through joint providership of SpectrumCare and Neurovations Education. SpectrumCare is accredited by the ACCME to provide continuing medical education for physicians. SpectrumCare designates this live activity for a maximum of 18.5 AMA PRA Category 1 Credits(tm). Physicians should claim only the credit commensurate with the extent of their participation in the activity. ________________________________ SCIENTIFIC COMMITTEE Elliot Krames, MD Past President INS, Founding Editor of Neuromodulation Eric Grigsby, MD, MBA CEO, Neurovations Clinical Research and Education Founder, Napa Pain Institute, the SpectrumCare Group Peter Staats, MD Premier Pain Centers, Past President, NANS Joe Pancrazio, PhD Associate Provost and Professor of Biomedical Engineering at University of Texas at Dallas Hunter Peckham, PhD Professor Biomedical Engineering, Case Western Reserve University Dominique Durand, PhD El Lindseth Professor of Biomedical Engineering, Case Western Reserve Universtiy Magdy Hassouna, MD, PhD Department of Urology, University of Toronto Ali Rezai, MD Director, OSU Neuroscience Program, Stanley and Jodi Ross Chair in Neuromodulation, Associate Dean of Neurosciences, Professor of Neurosurgery and Neuroscience Robert Gross, MD, PhD Professor, Departments of Neurosurgery, Neurology, Biomedical Engineering, and Neuroscience,Director, Functional, Stereotactic & Epilepsy Surgery Division Tony Yaksh, PhD Distinguished Professor in Anesthesiology and Pharmacology and Vice Chairman for Research in Anesthesiology(1988-present), Co-director of the Pain and Symptom Management Core of the UCSD Regional Cancer Center Chad Bouton, MS Division Leader, Neurotechnology and Analytics, The Feinstein Institute for Medical Research, Managing Director, Center for Bioelectronic Medicine Simon Thomson, MD Past President, INS Bengt Linderoth, MD, PhD Professor of Neurosurgery, retired, Karolinska Institute Robert Foreman, PhD George Lynn Cross Research Professor, University of Oklahoma, Dept of Physiology, retired Michael DeJongste, MD, PhD Faculty of Medical Sciences, Dept of Cardiology, University of Groningen Jiande Chen, PhD Professor of Medicine and Professor of Biomedical Engineering, Johns Hopkins University

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Deadline April 30 for Berkeley summer course in mining and modeling of neuroscience data
by Friedrich Sommer April 13, 2016

April 13, 2016

Just a reminder: The application deadline for the Berkeley course in mining and modeling of neuroscience data, held July 11-22, 2016 is April 30 midnight. Call for applications: We invite applicants to the 2016 summer course in "Mining and modeling of neuroscience data" to be held July 11-22, 2016 at UC Berkeley. A description of the course is below and also at: http://crcns.org/course Berkeley summer course in mining and modeling of neuroscience data. July 11-22, 2016 Redwood Center for Theoretical Neuroscience, UC Berkeley Organizers: Fritz Sommer, Bruno Olshausen & Jeff Teeters (HWNI, UC Berkeley) Scope This course is for students and researchers with backgrounds in mathematics and computational sciences who are interested in applying their skills toward problems in neuroscience. It will introduce the major open questions of neuroscience and teach state-of–the-art techniques for analyzing and modeling neuroscience data sets. The course is designed for students at the graduate level and researchers with background in a quantitative field such as engineering, mathematics, physics or computer science who may or may not have a specific neuroscience background. The goal of this summer course is to help researchers find new exciting research areas and at the same time to strengthen quantitative expertise in the field of neuroscience. The course is sponsored by the National Institute of Health, the National Science Foundation from a grant supporting activities at the data sharing repository CRCNS.org, and the Helen Wills Neuroscience Institute at UC Berkeley. Format The course is “hands on” in that it will include exercises in how to use and modify existing software tools and apply them to data sets, such as those available in the CRCNS.org repository. Course Instructors Robert Kass, Carnegie Mellon University, Pittsburgh Maneesh Sahani, Gatsby Unit, University College London Odelia Schwartz, University of Miami Frederic Theunissen, University of California Berkeley Joshua Vogelstein, Johns Hopkins University Course Moderators Fritz Sommer and Jeff Teeters, Redwood Center for Theoretical Neuroscience. Speakers To complement the main course instruction there will be lectures in the evenings by local Berkeley and UCSF neuroscientists presenting their research using quantitative approaches. Requirements Applicants should be familiar with linear algebra, probability, differential and integral calculus and have some experience using MatLab and Python. Each student should bring a laptop with both MatLab and Python installed. Cost There is no cost to attend. Non-local attendees will be reimbursed for economy travel expenses (up to a maximum, probably about $500) and also for qualifying food expenses if receipts are provided. Housing Rooms in a nearby hotel will be provided for those attendees who need accommodations. Food Breakfast and some dinners will be provided to all participants as a group. Non-local attendees can purchase food at local stores or restaurants and be reimbursed. How to apply To apply, submit the online form linked from: http://crcns.org/course. A curriculum vitae and a letter of recommendation are required. The course is limited to 25 students. Deadlines Applications must be received by the end of April. Notifications of acceptance will be given by May 15. Questions Questions about the course can be sent to course [at] crcns.org. Topics covered (subject to change): Basic approaches: - The problem of neural coding - Spike trains, point processes, and firing rate - Statistical thinking in neuroscience - Theory of model fitting / regularization / hypothesis testing - Overview of stimulus-response function models - Theory of model fitting / regularization / hypothesis testing - Bayesian methods - Spike sorting - Estimation of stimulus-response functionals: regression methods, spike-triggered covariance, - Variance analysis of neural response - Estimation of SNR. Coherence Information theoretic approaches: - Information transmission rates - Scene statistics approaches and neural modeling Techniques for analyzing multiple-electrode and optical neural recordings: - Event sorting in electrophysiology and optical imaging - Optophysiology cell detection - Sparse coding/ICA methods, vanilla and methods including statistical models of nonlinear dependencies - Methods for assessing functional connectivity - Statistical issues in network identification - Low-dimensional latent dynamical structure in network activity–Gaussian process factor analysis/newer methods Analyzing structural data: - Histology cell detection - Statistical connectomics Neuroinformatics topics: - Petascale data storage, exploration, parsing and analysis - Introduction into Neurodata Without Borders data format for Neurophysiology

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Postdoctoral position: computational neuroscience in NYU
by Chen, Zhe April 13, 2016

April 13, 2016

Dear colleagues, Applications are now being accepted for a postdoctoral fellow position to combine computational and experimental techniques to study neural mechanisms of thalamus-neocortical circuits using healthy or diseased rodent models (1-4). The applicant will work closely with Dr. Zhe (Sage) Chen and Dr. Mike Halassa at the New York University School of Medicine, with cross-disciplinary training in computational and systems neuroscience, including rodent behavior and electrophysiology. The applicant will have great opportunities to interact with a large and growing neuroscience community at the NYU campus, including the Neuroscience Institute (http://neuroscience.med.nyu.edu<http://neuroscience.med.nyu.edu/>), Center for Neural Science (http://www.cns.nyu.edu<http://www.cns.nyu.edu/>), Department of Neuroscience & Physiology (http://neuro-physio.med.nyu.edu<http://neuro-physio.med.nyu.edu/>), and Department of Psychiatry (http://psych.med.nyu.edu<http://psych.med.nyu.edu/>). NYU Neuroscience community is also surrounded by other institutions in the greater New York metropolitan area (such as Columbia, Cornell, Rockefeller and Mount Sinai). The postdoc position is available immediately, and will be renewable depending on performance. Applications must have a PhD degree in Neuroscience, Engineering (Biomedical or Electrical), Statistics, Physics or a related discipline. The desired applicant is expected to be highly motivated and work independently as well as cooperatively with other colleagues in all research projects. Ability to learn new techniques and resolve new research challenges is essential. Strong experiences in large-scale computational (biophysical and statistical) modeling of neural circuits are desired. Previous training in some but not necessary all areas, such as animal behavior and optogenetics, in vivo neural recordings at the system levels, are preferred. Research experience with multi-electrode recordings of rodent neural circuits is a plus. To apply, please send an email along with (i) CV (with a complete list of publications); (ii) a cover letter describing research accomplishments and interests; (iii) the names and contact information of two to three references to: Dr. Zhe (Sage) Chen (zhe.chen3(a)nyumc.org<mailto:zhe.chen3@nyumc.org>) or Dr. Mike Halassa (Michael.halassa(a)nyumc.org<mailto:Michael.halassa@nyumc.org>) with a subject line “Postdoc application”. Best Zhe (Sage) Chen Related references: 1. Halassa, M.M., Chen, Z., Wimmer, R.D., Brunetti, P.M., Zhao, S., Zikopoulos, B., Wang, F., Brown, E.N., Wilson, M.A. (2014) State-dependent architecture of thalamic reticular sub-networks. Cell, 158: 808-824. 2. Chen, Z., Wimmer, R.D., Wilson, M.A., Halassa, M.M. (2015) Thalamic circuit mechanisms link sensory processing in sleep and attention. Front. Neural Circuits, 9:83. 3. Wimmer, R.D., Schmitt, L.I., Davidson, T.J., Nakajima, M., Deisseroth, K.,Halassa, M.M. (2015) Thalamic control of sensory selection in divided attention. Nature, 526: 705–709, DOI: 10.1038/nature15398. 4. Wells, M.F., Wimmer, R.D., Schmitt, L.I., Feng, G., Halassa, M.M. (2016) Thalamic reticular impairment underlies attention deficit in Ptchd1Y/- mice. Nature, 532: 58-63, DOI: 10.1038/nature17427. ------------------------------------------------------------ This email message, including any attachments, is for the sole use of the intended recipient(s) and may contain information that is proprietary, confidential, and exempt from disclosure under applicable law. Any unauthorized review, use, disclosure, or distribution is prohibited. If you have received this email in error please notify the sender by return email and delete the original message. Please note, the recipient should check this email and any attachments for the presence of viruses. The organization accepts no liability for any damage caused by any virus transmitted by this email. =================================

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CFP- Frontiers Research Topic: Cortico-striato-nigro-thalamo-cortical Modeling for Understanding Motor Function and Neurodegenerative Disease
by Zheng April 13, 2016

April 13, 2016

To whom it may concern: In collaboration with Frontiers in Computational Neuroscience, we are organizing a Research Topic titled "Cortico-striato-nigro-thalamo-cortical Modeling for Understanding Motor Function and Neurodegenerative Disease”, hosted by Pengsheng Zheng, James Kozloski, Timothy Rumbell, George V. Rebec. As host editor, I would like to encourage you to contribute to this topic. Please find more information about Research Topics below, including the publishing fees that apply. You can also visit the homepage we have created on the Frontiers website, which defines the focus of the topic, and where all published articles will appear. http://frontiersin.org/Computational_Neuroscience/researchtopics/Cortico-st… Movement in the body is directly controlled by motor cortex, and also determined by multiple subcortical structures, such as thalamus and the basal ganglia (including striatum and dopamine neurons in the substantia nigra). Many lines of evidence have suggested the cortico-striato-nigro-thalamo-cortical circuitry plays a major role in motor learning and control. This circuitry has also been investigated for its causal role in the onset and progression of neurodegenerative diseases. Neurodegenerative diseases are often associated with movement disorders and neuronal dysfunction in degenerated brain structures, such as the striatum in Huntington’s disease and dopaminergic neurons in the substantia nigra pars compacta in Parkinson's disease. Degeneration fundamentally changes the dynamics of local neuronal circuits, and these changes then propagate through the structural connectome of whole brain circuitry, eventually altering global brain dynamics. However, our current understanding of these system dynamics in the cortico-striato-nigro-thalamo-cortical circuitry remains rudimentary. Hence, theoretical studies about critical system variables and computational principles of this circuitry, constrained by recordings throughout, will shed new light on causes of motor dysfunction and neurodegenerative diseases. This Research Topic of Frontiers in Computational Neuroscience aims to bring together recent advances in theoretical modeling of cortico-striato-nigro-thalamo-cortical network and experimental observations. Topics of interest include, but are not limited to, local brain circuit modeling, the functional role of neuronal plasticity in the local and global circuit, global circuit interactions and information exchange, new models validated by experimental observations, and dynamic disease risk analysis through perturbation studies. Best regards, Pengsheng Zheng zhengp(a)us.ibm.com <mailto:zhengp@us.ibm.com> T.J. Watson Research Center 1101 Kitchawan Rd., 13-114A Yorktown Heights, NY 10598

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Summer School "Advanced Scientific Programming in Python" in Reading, UK, September 5--11, 2016
by Etienne B. Roesch April 13, 2016

April 13, 2016

*Advanced Scientific Programming in Python* a Summer School by the G-Node, and the Centre for Integrative Neuroscience and Neurodynamics, School of Psychology and Clinical Language Sciences, University of Reading, UK Scientists spend more and more time writing, maintaining, and debugging software. While techniques for doing this efficiently have evolved, only few scientists have been trained to use them. As a result, instead of doing their research, they spend far too much time writing deficient code and reinventing the wheel. In this course we will present a selection of advanced programming techniques and best practices which are standard in the industry, but especially tailored to the needs of a programming scientist. Lectures are devised to be interactive and to give the students enough time to acquire direct hands-on experience with the materials. Students will work in pairs throughout the school and will team up to practice the newly learned skills in a real programming project — an entertaining computer game. We use the Python programming language for the entire course. Python works as a simple programming language for beginners, but more importantly, it also works great in scientific simulations and data analysis. We show how clean language design, ease of extensibility, and the great wealth of open source libraries for scientific computing and data visualization are driving Python to become a standard tool for the programming scientist. This school is targeted at Master or PhD students and Post-docs from all areas of science. Competence in Python or in another language such as Java, C/C++, MATLAB, or Mathematica is absolutely required. Basic knowledge of Python and of a version control system such as git, subversion, mercurial, or bazaar is assumed. Participants without any prior experience with Python and/or git should work through the proposed introductory material before the course. We are striving hard to get a pool of students which is international and gender-balanced. You can apply online: https://python.g-node.org *Application deadline: 23:59 UTC, May 15, 2016. Be sure to read the FAQ before applying. * Participation is for free, i.e. no fee is charged! Participants however should take care of travel, living, and accommodation expenses by themselves. Travel grants may be available. *Date & Location * September 5—11, 2016. Reading, UK *Program * - Best Programming Practices • Best practices for scientific programming • Version control with git and how to contribute to open source projects with GitHub • Best practices in data visualization - Software Carpentry • Test-driven development • Debugging with a debugger • Profiling code - Scientific Tools for Python • Advanced NumPy - Advanced Python • Decorators • Context managers • Generators - The Quest for Speed • Writing parallel applications • Interfacing to C with Cython • Memory-bound problems and memory profiling • Data containers: storage and fast access to large data - Practical Software Development • Group project *Preliminary Faculty * • Francesc Alted, freelance consultant, author of PyTables, Spain • Pietro Berkes, Enthought Inc., Cambridge, UK • Zbigniew Jędrzejewski-Szmek, Krasnow Institute, George Mason University, Fairfax, VA, USA • Eilif Muller, Blue Brain Project, École Polytechnique Fédérale de Lausanne, Switzerland • Juan Nunez-Iglesias, Victorian Life Sciences Computation Initiative, University of Melbourne, Australia • Rike-Benjamin Schuppner, Institute for Theoretical Biology, Humboldt-Universität zu Berlin, Germany • Bartosz Teleńczuk, European Institute for Theoretical Neuroscience, CNRS, Paris, France • Stéfan van der Walt, Berkeley Institute for Data Science, UC Berkeley, CA, USA • Nelle Varoquaux, Centre for Computational Biology Mines ParisTech, Institut Curie, U900 INSERM, Paris, France • Tiziano Zito, freelance consultant, Germany *Organizers * For the German Neuroinformatics Node of the INCF (G-Node) Germany: • Tiziano Zito, freelance consultant, Germany • Zbigniew Jędrzejewski-Szmek, Krasnow Institute, George Mason University, Fairfax, USA • Jakob Jordan, Institute of Neuroscience and Medicine (INM-6), Forschungszentrum Jülich GmbH, Germany For the Centre for Integrative Neuroscience and Neurodynamics, School of Psychology and Clinical Language Sciences, University of Reading UK: • Etienne Roesch, Centre for Integrative Neuroscience and Neurodynamics, University of Reading, UK *Website*: https://python.g-node.org *Contact*: python-info(a)g-node.org Kind regards, Etienne ----- Dr. Etienne B. Roesch Lecturer in Cognitive Science University of Reading

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Early Career Research Fellowship in Systems Biology / Machine Learning for Food and Disease
by Steuber, Volker April 13, 2016

April 13, 2016

Early Career Research Fellowship in Systems Biology / Machine Learning for Food and Disease Closing date: 17 May 2016 Salary: £31,656 - £37,768 per annum depending on skills and experience. The University of Hertfordshire is investing in its future research staff and infrastructure, and is in the process of transitioning the delivery of its research under six Themes: Food; Global Economy; Health and Wellbeing; Heritage, Cultures and Communities; Information and Security; Space. These will assist in the further development of research excellence and provide both increased external profile and internal focus for Hertfordshire’s research activities. Six new Research Fellow posts are each offered for a five year term in the first instance. It is our expectation, however, that successful appointees will grow their research activities to become permanent academic staff members by the end of that period. Further particulars for the ECRF in Systems Biology / Machine Learning for Food and Disease Qualifications required: You must have a first degree in a science, such as biology, computer science, mathematics or a relevant subject, and a doctoral degree in bioinformatics, machine learning, quantitative genetics or a related subject area. Experience in systems biology, big data science or genomics will be particularly relevant. Research focus and environment: This Fellowship will focus on emerging methods in biocomputation that generate and exploit large data sets of biological information available from genomics, transcriptomics, proteomics and metabolomics to better understand mechanisms of host resistance/immunity and/or resistance breakdown. The Fellow will generate an improved understanding of relevant biological systems to develop specific strategies to combat infectious diseases caused by plant, animal or human pathogens. This Fellowship will be supported by existing collaborations between colleagues in Schools of Life & Medical Sciences (Kukol, Stotz, Barling, Fitt) and Computer Science (Steuber). The Fellow is expected to use the University’s high performance computer cluster. Experience and skills required for the post (i) Considerable experience with big data analysis and machine learning, including working knowledge of scripting languages like Perl, Python and/or R; (ii) Knowledge of genomic research techniques, such as next-generation sequencing, proteomics and/or metabolic profiling; (iii) Practical experience with the application of numerical analysis and/or mathematical models to biological datasets, for example in genomics or quantitative genetics; (iv) Evidence of original research published in high impact journals. Research expectations The Fellow is expected to develop a collaborative research program with our academic partners. We envisage that the Research Fellow will become a permanent staff member, supported by funding from successful research grant applications and developing new areas of teaching, especially at the post-graduate level. To ensure this, the two Schools will provide career training for the Fellow. The Fellow will have established collaborations with companies and successfully obtained co-funded industry-government projects. The Fellow will continue to publish high-impact papers and be leading an internationally recognised research team. Description of the Schools: The Early Career Research Fellow will work with and receive support from the School of Life and Medical Sciences and the School of Computer Science. The successful candidate can build on the strengths of both Schools and may combine experiment-based empirical research with data-based analysis. Within the School of Life and Medical Sciences (http://www.herts.ac.uk/apply/schools-of-study/life-and-medical-sciences/res…) the Centre for Agriculture, Food and Environmental Management (CAFEM) is a research and teaching collaboration with the Royal Veterinary College, Rothamsted Research and Oaklands College. The Fellow will work with researchers in CAFEM who have experience with systems biology applicable to crop protection, combining experimental field and lab research with computational modelling. Within the School of Computer Science, research in the Biocomputation Research Group (http://biocomputation.herts.ac.uk/) involves development of computational models to study biological systems and application of biologically-inspired machine learning algorithms for the analysis of "real-world" data. Members of the Biocomputation Group analyse and simulate computational models at different levels of complexity and collaborate closely with leading experimentalists in the UK and abroad. Informal enquiries are encouraged and should be made to Professor Bruce Fitt, Professor of Plant Pathology, email: b.fitt(a)herts.ac.uk / Tel + 44 (0)1707 284751 or Dr Volker Steuber, Reader in Biocomputation and Head of the Biocomputation Research Group, email: v.steuber(a)herts.ac.uk / Tel: +44 (0)1707 284350. Applications should be made through http://www.herts.ac.uk/contact-us/jobs-and-vacancies/research-vacancies, job reference 013457.

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Advances in Neuroinformatics and INCF Nodes WS in Japan, May 28-29 - Abstract submission closes April 18
by Malin Sandström April 13, 2016

April 13, 2016

Dear neuroinformatics community members, would you like to stay up to date on recent neuroinformatics developments in Asia? Are you looking for new collaborators in Japan and/or Asia and the Pacific region? There is one week left to submit abstracts for the combined INCF Nodes Workshop and Japan Node AINI (Advances in Neuroinformatics) on *May 28-29*. The location is RIKEN's Wako campus, located in west Tokyo. The two meetings are integrated, with joint demo and poster sessions held on both days. The theme of AINI 2016 is "Integration of multidimensional neuroscience“, with keynotes by Maryann Martone, Thomas Wachtler, Jun'ichi Tsujii and Teiichi Furuichi. The INCF Nodes Workshop will be a scientific networking event with a special focus session on Asian and Pacific neuroinformatics, which has invited speakers from Australia, China, Japan, Korea, and Malaysia. The full program is available here: http://www.neuroinf.jp/aini2016/program.html *Registration is free of charge*, and open until May 20, while the *abstract submission is open until April 18*. An abstract will be 1/2 page in A4 size, and you may add one figure separately. Best regards on behalf of all organizers, Malin Sandström -- Malin Sandström, PhD Community Engagement Officer malin.sandstrom(a)incf.org International Neuroinformatics Coordinating Facility Karolinska Institutet Nobels väg 15 A SE-171 77 Stockholm Sweden http://www.incf.org

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