- Comp-neuro - lists.cnsorg.org

Final Program of the Columbia Workshop on Brain Circuits, Memory and Computation, March 13-14, 2017
by Aurel A. Lazar Feb. 28, 2017

Feb. 28, 2017

fruitflybrain.org/workshops.html <https://t.co/mY9aARlYrB> Aurel http://www.bionet.ee.columbia.edu

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Immediate Postdoc and Asst. Prof. openings in the lab of Dr. Kevin Tracey at the Feinstein Institute for Medical Research
by Platt, Jo Ann Feb. 27, 2017

Feb. 27, 2017

Job description Postdoctoral and Assistant Professor opportunities are available immediately in the laboratory of Dr. Kevin J. Tracey at the Center for Biomedical Sciences at the Feinstein Institute for Medical Research, Manhasset, NY. We are seeking driven individuals to join a newly funded research program on investigating the role of ascending and descending neural pathways in the control of adaptive immune function. The research focus of the lab is in the field of Bioelectronic Medicine to develop nerve-stimulating technologies to regulate the molecular targets underlying disease. The fellow will interact with a wide range of researchers in a dynamic and productive environment, bridging basic science with clinical research. Interested applicants should send a brief description of research interests and curriculum vitae, including contact information for three references to Jo Jo Platt, Center for Bioelectronic Medicine japlatt(a)northwell.edu Desired skills and experience The successful candidate will hold a Ph.D. or M.D./Ph.D. with electrophysiology skills including electrical and optogenetic modulation of peripheral neural circuitry, neuroanatomical mapping, and single cell neuronal recording. The candidate is expected to have strong skills in major biochemistry and cell biology techniques, animal handling, primary cultures and quantitative data analysis. A strong immunology background, experience with animal models including cre-lox models, animal surgery, molecular biology, and microscopy would be an asset. The information contained in this electronic e-mail transmission and any attachments are intended only for the use of the individual or entity to whom or to which it is addressed, and may contain information that is privileged, confidential and exempt from disclosure under applicable law. If the reader of this communication is not the intended recipient, or the employee or agent responsible for delivering this communication to the intended recipient, you are hereby notified that any dissemination, distribution, copying or disclosure of this communication and any attachment is strictly prohibited. If you have received this transmission in error, please notify the sender immediately by telephone and electronic mail, and delete the original communication and any attachment from any computer, server or other electronic recording or storage device or medium. Receipt by anyone other than the intended recipient is not a waiver of any attorney-client, physician-patient or other privilege.

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Reminder: CNS*2017 Abstract Deadline March 5
by Sharon Crook Feb. 27, 2017

Feb. 27, 2017

CNS*2017 Call for Abstracts Organization for Computational Neurosciences (OCNS) 26th Annual Meeting Antwerp, Belgium July 15-20, 2017 The main meeting (July 16-18) will be preceded by a day of tutorials (July 15) and followed by two days of workshops (July 19-20). Invited Keynote Speakers: Erik De Schutter, Okinawa Institute of Science and Technology, Japan Panayiota Poirazi, IMBB-Forth, Greece Karl Friston, University College London, UK Sue Denham, University of Plymouth, UK A preliminary program for the workshops is available at: http://www.cnsorg.org/cns-2017-workshops Registration and abstract submission are open. Abstract submission deadline: March 5th, 2017 Note that one of the authors must register as sponsoring author for the main meeting before abstract submission is possible. In case the abstract is not accepted for presentation, the registration fee will be refunded. For up-to-date conference information, please visit: http://www.cnsorg.org/meetings

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PhD position in multimodal neuroimaging in Munich
by Igor Yakushev Feb. 25, 2017

Feb. 25, 2017

A PhD position is available at the Department of Nuclear Medicine (Head of Neuroimaging: Dr. Igor Yakushev), Technical University of Munich (TUM), Germany. The project will investigate neuronal substrates of training-induced cognitive improvement in middle-aged healthy subjects at the level of large-scale brain connectivity. The study involves acquisition and analysis of PET and DTI data. This three-year PhD position is funded by a grant of the German Research Foundation (DFG; pay scale TV-L 13 65%), with starting date May 2017. The Dept. of Nuclear Medicine offers exciting opportunities for neuroimaging research in an interdisciplinary environment consisting of computational scientists, medical physicists, and clinicians, and access to state-of-the-art technology including a hybrid PET/MR scanner. The research group is integrated into the TUM Neuroimaging Center, which possesses a broad methodological and thematic expertise: http://www.tumnic.mri.tum.de/tumnic/index.html The PhD student will be enrolled at a TUM graduate school that offers a structured curriculum of courses and seminars and supports participation in conferences and international exchange: http://www.gs.tum.de/en/home/ There is no tuition fee at the TUM. Prior experience with image analysis, programming and good statistical skills are required. Interested researchers should submit their applications including CV, two recommendation letters (or names and contact details of personal references), and a brief letter of motivation to Dr. Yakushev at igor.yakushev(a)tum.de Applications will be considered until the position has been filled.

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MBL Methods in Computational Neuroscience Course: Applications due March 7
by Mark Steven Goldman Feb. 25, 2017

Feb. 25, 2017

Applications are open for the Methods in Computational Neuroscience course at the Marine Biology Laboratory in Woods Hole, MA. The course will run from July 30 to August 24, 2017, and the online application form can be found at: https://ws2.mbl.edu/studentapp/studentapp.asp?courseid=MCN The course application deadline is *March 7*. The course covers a range of topics in computational neuroscience including neuronal biophysics, neural coding & information processing, circuit dynamics, learning & memory, motor control, and cognitive processing & disease. In addition, numerous tutorials and problem sets will cover a broad range of computational and mathematical modeling methods. The course strongly emphasizes the collaboration between theory and experiment in solving neuroscience problems, and lectures will be given by a mixture of theorists and experimentalists. The final weeks of the course are primarily reserved for work on projects that students design in collaboration with the resident faculty. Further information can be found on the MCN website: http://www.mbl.edu/mcn/ 2017 Course Directors: Michale Fee, MIT Mark Goldman, UC Davis 2017 Confirmed Faculty: Larry Abbott, Columbia University Steve Baccus, Stanford University Carlos Brody, Princeton University Emery Brown, MIT Dmitri Chklovskii, Simons Foundation Uri Eden, Boston University Bard Ermentrout, University of Pittsburgh Adrienne Fairhall, University of Washington Ila Fiete, UT Austin Loren Frank, UCSF Stefano Fusi, Columbia University Jack Gallant, UC Berkeley Surya Ganguli, Stanford University Nancy Kopell, Boston University Eve Marder, Brandeis University Bartlett Mel, University of Southern California Jonathan Pillow, Princeton University Cristina Savin, NYU Terry Sejnowski, Salk Institute Sara Solla, Northwestern University Haim Sompolinsky, Hebrew University Josh Tenenbaum, MIT Xiao-Jing Wang, NYU

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Funded PhD studentship in computational cognitive neuroscience
by Srivas Chennu Feb. 24, 2017

Feb. 24, 2017

Applications are invited for a funded PhD studentship with Dr Srivas Chennu in the School of Computing at the University of Kent (UK) to be based in our Medway Campus, to begin in September 2017 or shortly thereafter. The PhD project will focus on the research topics below, spanning computational and translational neuroscience. ==Neurodynamics of consciousness== Understanding how neural dynamics generate human consciousness is a grand challenge for neuroscience. We develop computational frameworks that use neuroscientific data (EEG/MEG/fMRI) to study the brain network correlates of consciousness during normal wakefulness, and in altered states like sleep, sedation and meditation. We also apply this science to build computational tools for improving diagnostics and prognostics during emergence from coma, and in prolonged disorders of consciousness (including the so-called vegetative and minimally conscious states). These tools could eventually be deployed right at the patients' bedside to visualise, quantify and track how their brains are recovering after injury. ==Deep neural network models of cognition== The idea that the brain is a hierarchical neural network designed for predictive cognition is persuasive one. In this view, the cortex implements Bayesian inference to maintain a successively complex hierarchy of predictive models of sensory causation. Alongside, deep learning can enable us to build dense neural networks based on complex neuroimaging datasets. We combine EEG/MEG with these modelling frameworks to describe how recurrent neural information processing realises predictive cognition in the brain. The successful applicant will be able to capitalise on Dr. Chennu’s strong research links with empirical and clinical collaborators at the Universities of Cambridge, Birmingham, Liége (Belgium), and Western Ontario (Canada). They will be embedded within the Data Science research group within the school, which brings together academics with expertise in signal processing, brain-computer interfacing, machine learning and computational intelligence. More information is available is available at Dr Chennu’s academic website: www.cs.kent.ac.uk/people/staff/sc785/ ==The School of Computing, University of Kent== The School of Computing has a reputation for high-quality research, with over 40 current PhD students. Our research activity is wide ranging and takes place within focused Research Groups which provide a vibrant research community for all members, staff or student. The School of Computing was ranked highly in the recent government run Research Excellence Framework (REF) exercise. Our research intensity was ranked 12th out of 89, with superb impact – 100% of our research impact ranked world leading or internationally excellent. The University of Kent is a leading university with a commitment to excellence in teaching and research. As the UK's European university, it is committed to creating a global student and staff community that advances knowledge and stimulates intellectual creativity, and performs at the highest levels. Kent is ranked 21st in the Times Higher Education (THE) ‘Table of Tables’ 2017 and it has twice been awarded the highly prestigious Queen's Anniversary Prize for Higher and Further Education. The School is committed to the Athena Swan Scheme. This is a national scheme whereby Universities commit to advancing and promoting the careers of female scientists. Details can be seen on our website at http://www.kent.ac.uk/human-resources/athenaswan/. Kent’s Medway campus in Chatham Maritime is a 45-minute journey south-east from London’s St. Pancras International station. ==Funding== A scholarship award will cover the successful applicant’s fees at the home/EU rate (£4,121 in 2016/17) plus a maintenance bursary (£14,296 in 2016/17). The award will be for three years, subject to satisfactory progression through each year of study. They are awarded on a competitive basis and interview performance will be taken into account. Support for research students includes regular supervision meetings, a research training programme, computer equipment, a desk in an office and funds for conference travel. ==Applicant Qualifications== You should: Essential- Hold a good undergraduate degree (UK First or 2:1 or equivalent) in a numerate discipline (computing, engineering, physics, etc.). Students with a background in biology and psychology are also welcome to apply, as long as they have the requisite technical and quantitative skills. Be able to program independently in high-level scientific programming languages like MATLAB, Python and R. Desirable- Have prior experience or evidenced interest in computational neuroscience. Able to work with complex time-series data, including EEG. ==How to Apply== Please get in touch with Dr Chennu by email (sc785(a)kent.ac.uk) in the first instance, with a Curriculum Vitae and a brief outline of your research proposal. Applications need to be submitted by Monday 3 April 2017.

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Deadline approaching for Smart Start Application
by Smart Start Coordination Office Feb. 24, 2017

Feb. 24, 2017

Call for applications Ready for a SMARTSTART into Computational Neuroscience? We invite first and second-year Master students with a background in related fields to apply to our joint training program SMARTSTART. The program aims at complementing previous studies with concepts, theories and techniques of Computational Neuroscience. SMARTSTART consists of two programs. Both of them last one year each and take place at numerous locations of the Bernstein Network and further locations throughout Germany. SMARTSTART provides financial support to then second-year Master students, allowing them to attend supplementary courses and training visits at participating institutions. Students will receive an experienced faculty mentor who will advise and guide them at this educational stage. SMARTSTART 2 provides fully funded positions for pre-PhD students. At the start of the program, these students will have already obtained their Master´s degree and are in the process of selecting a PhD project. SMARTSTART 2 allows them to elaborate their own PhD proposal as a collaborative project between two labs. This comprises exchange visits as well as voluntary attendance of lectures and courses offered by participating institutions. Both SMARTSTART programs will commence the second round in the winter term 2017/18. The Deadline for application is Tuesday, February 28, 2017. More information can be found on our website: www.smartstart-compneuro.de<http://www.smartstart-compneuro.de> Best regards, Kathrin Hebert -- Coordination Office Smart Start - Joint Training Program in Computational Neuroscience Bernstein Network Computational Neuroscience | Bernstein Coordination Site (BCOS) Branch Office of the Forschungszentrum Jülich at the University of Freiburg Hansastr. 9A | 79104 Freiburg, Germany phone: (+49) 0761 203 9593 mail: smartstart(a)fz-juelich.de<mailto:smartstart@fz-juelich.de> web: www.nncn.de<http://www.nncn.de> Twitter: NNCN_Germany<https://twitter.com/NNCN_Germany> YouTube: Bernstein TV<https://www.youtube.com/user/BernsteinNetwork> Facebook: Bernstein Network Computational Neuroscience, Germany<https://www.facebook.com/BernsteinNetwork/> LinkedIn: Bernstein Network Computational Neuroscience, Germany<https://www.linkedin.com/company/bernstein-network-computational-neuroscien…> <https://www.linkedin.com/company/bernstein-network-computational-neuroscien…> ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Juelich GmbH 52425 Juelich Sitz der Gesellschaft: Juelich Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Dr. Karl Eugen Huthmacher Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender), Karsten Beneke (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt, Prof. Dr. Sebastian M. Schmidt ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------

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Software Engineer position to develop biological neural network modeling tool (SUNY Downstate, Brooklyn, NY)
by Salvador Dura Feb. 23, 2017

Feb. 23, 2017

We are looking for a software engineer to work on NetPyNE, a python package to facilitate the development, parallel simulation and analysis of biological neuronal networks using the NEURON simulator. For more information on the tool see: - Website with documentation: http://neurosimlab.org/netpyne/ - Github: https://github.com/Neurosim-lab/netpyne - Conference posters: CNS16 and SFN16 Responsabilities: - Design and implementation of new features, maintenance, and debugging of NetPyNE package (including new GUI). - Providing technical support to lab members developing models using the NEURON simulator and NetPyNE package. - Writing documentation, attending meetings/conferences, and giving presentations on software package. Requirements: - MSc in Engineering, Computer Science or related discipline. - Minimum 5 years experience in full-stack (front-end and back-end) software development (scientific software a plus). - Expertise with Python; fluency with Linux, Git/Github. - GUI design/implementation experience is a plus. - Previous experience in research/academic environment and/or neuroscience background are a plus Conditions: - Postdoc-level salary (commensurate with experience) - Initial contract of 1 year with possibility of extension (depending on performance and budget) - Become part of the Neurosim lab (http://neurosimlab.org) at the State University of New York (SUNY) Downstate Medical Center. - Academic environment with possibility of getting involved in several neuroscience research projects and interacting with 10-15 researchers (graduate students, postdocs and professor). - Work in New York, a vibrant city with a wide offer of activities (working remotely also a possibility) To apply please send CV and cover letter to salvadordura(a)gmail.com and billl(a)neurosim.downstate.edu

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2 postdoctoral positions in Quantitative Biological Modeling
by Hermann Riecke Feb. 23, 2017

Feb. 23, 2017

Hi Could you please post the ad below on teh comp-neuro list? thank you Hermann Riecke ——————————— Overview: The Department of Engineering Sciences and Applied Mathematics solicits applications for postdoctoral fellowships in quantitative biological modeling. Two positions are available starting September 1, 2017 and a third position starting September 1, 2018. These positions are part of a National Science Foundation Research Training Grant (NSF-RTG). Duties: Postdoctoral fellows will conduct research on the quantitative modeling of biological systems and will teach three quarter courses per year in the department. Each position will typically be for three years. Postdoctoral fellows will additionally participate in RTG-related training and career development activities. Environment: Postdoctoral fellows will be part of an interdisciplinary environment focusing on current problems in experimental and computational biology. Fellows will gain experience from training in mathematical modeling, numerical methods, and modern data analysis/statistical tools relevant to biological problems. Research internships outside of Northwestern will broaden fellows' perspectives. Each fellow's research will be mentored by faculty from both applied mathematics and a biological discipline. Ongoing collaborations exist with faculty in Neurobiology, Molecular Biosciences, Environmental Engineering and Preventive Medicine, and additional areas of interest are welcome. An overall goal of the program is to broaden computational biological modeling in the department and at Northwestern. Requirements: Applicants must be U.S. citizens or permanent residents. Interested candidates should submit a curriculum vitae, three reference letters (one addressing teaching qualifications) and brief research and teaching statements online at the URL: https://openposition.mccormick.northwestern.edu/apply/index/NjE= If desired, one or two representative publications may also be submitted. Applications for the Fall 2017 position are currently being reviewed and will continue being considered until the position is filled. Northwestern University is an Equal Opportunity, Affirmative Action Employer of all protected classes including veterans and individuals with disabilities. Women and minorities are encouraged to apply. Inquiries about the position may be directed to: Hermann Riecke Engineering Sciences and Applied Mathematics Northwestern University 2145 Sheridan Road Evanston, IL 60208-3125 Phone: (847) 491-3345 Email: h-riecke(a)northwestern.edu http://www.mccormick.northwestern.edu/applied-math/

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Postdoc positions in Neuromorphic computing in Singapore
by Yansong Chua Feb. 23, 2017

Feb. 23, 2017

Multiple scientist and research engineer positions are available in Singapore, at the Institute for Infocomm Research (I2R), A*STAR, Singapore. This project is part of a large multidisciplinary grant in neuromorphic technologies involving multiple universities and research institutions in Singapore (NUS, NTU, IME, IHPC, I2R). The project is focused on building a new neuromorphic chip using RRAM that enables on-chip learning, together with a suite of learning algorithms that would then be deployed in applications in the advanced manufacturing domain. The primary scope of our research is to develop spike-based computing and learning algorithms for deep spiking neural networks on a neuromorphic chip. Specifically, we are interested in employing spikes in information processing and learning. To this end, successful candidates will conduct research in one or more of the following areas: - Neuronal coding. What coding and readout strategy underlie spike-based representation. How to encode external stimuli into spike based representations and how to readout information from spike activities. - Learning. How does neurons adapt their synaptic weights to perform a given task under cases of supervised, unsupervised and reinforcement signals. What are the underlying mechanisms for deep-structured network learning. - System integration and applications. How to integrate different computational principles into a system and apply it to solve different practical tasks. Preference will be given to candidates who can document knowledge in machine learning, neural networks, information processing, system design or hardware implementation with VLSI and FPGA. Candidates must have a PhD (for scientists) or MS/BS (for engineers) in computer science, computational neuroscience or related fields. Strong programming and quantitative skills are highly desired. Candidates should be proficient in spoken and written English. The appointments will be for 2 years, and extended for another 2 years, after review. Salaries are commensurate with internationally-competitive salaries and benefits. For comparison, in 2013, Singapore's per capita GDP is US$55,000 and US's per capita GDP is US$53,000. Other benefits include: - Funding for international conferences and training courses - Collaboration opportunities with an excellent network of international scientists Candidates please send your curriculum vitae, a statement of research interests and three references to Dr. Yansong Chua (chuays(a)i2r.a-star.edu.sg) or Dr. Qiang Yu (yuqiang(a)i2r.a-star.edu.sg) More information: - Institute for Infocomm Research: http://www.i2r.a-star.edu.sg/ - Working in Singapore: http://www.contactsingapore.sg/professionals/why_ singapore/

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master in Brain and Cognition, with focus on Computational Neuroscience and Data Analysis, Barcelona
by Ruben Moreno Bote Feb. 23, 2017

Feb. 23, 2017

Dear Comp-neuro members, The Master in Brain and Cognition being offered at Pompeu Fabra University (UPF), Barcelona Spain (http://www.upf.edu/mbc/) opens the rolling application period. The core of the master's programme is composed of the research groups at UPF's Center for Brain and Cognition (http://cbc.upf.edu) In this email, we emphasize the possibility of participation of outstanding candidates with strong quantitative background, such as physics, mathematics or machine learning eager to learn about computational and cognitive neuroscience. Candidates with these backgrounds could perform research activity with the following experts in computational neuroscience: Gustavo Deco (http://cns.upf.edu/) Albert Compte (http://complab.fcrb.es/complab/pres) Rubén Moreno-Bote (https://portal.upf.edu/web/ruben-moreno-bote) Overall, the groups participating at the Master are directed by renowned scientists in areas such as computational neuroscience, cognitive neuroscience, psycholinguistics, vision, multisensory perception, human development and comparative cognition https://www.upf.edu/mbc/who_ are_we2.html . Students will be exposed to the ongoing research projects at the Center for Brain and Cognition and will be integrated in one of its main research lines, where they will conduct original research for their final project. Please visit the Master’s web page or contact mbc(a)upf.edu for further information. Scientific-related questions such as fit of quantitative backgrounds can be consulted to ruben.moreno(a)upf.edu Rubén Moreno-Bote -- Rubén Moreno Bote Serra Húnter Professor Center for Brain and Cognition & Dept. of Information and Communications Technologies University Pompeu Fabra Campus Ciutadella, Building 24, office 331 Ramon Trias Fargas, 24-27 08005 Barcelona, Spain http://www.upf.edu/pdi/ruben-moreno-bote

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REMINDER: Call for Workshops - Bernstein Conference 2017
by Zrinka Gattin Feb. 23, 2017

Feb. 23, 2017

The Bernstein Network Computational Neuroscience and the Bernstein Center Göttingen invite proposals for Satellite Workshops. Satellite Workshops will directly precede the Bernstein Conference 2017 in Göttingen. ************************************************************** Important Dates: Workshops: September 12 - 13, 2017 Main Bernstein Conference: September 13 - 15, 2017 Deadline for proposal submission: March 01, 2017 Notification of workshop acceptance: March 27, 2017 ************************************************************** Since 2013, the Bernstein Conference hosts pre-conference workshops. They provide a stage to discuss topical research questions, novel scientific approaches and challenges in Computational Neuroscience and related fields. Workshops addressing controversial issues, open problems, and comparisons of competing approaches are encouraged. Workshop formats should be designed to foster debate beyond a mere series of talks. The Bernstein Conference started out as the annual meeting of the Bernstein Network Computational Neuroscience and has become the largest annual single-track Computational Neuroscience conference in Europe in recent years. Workshop time frame: September 12, 2017, 13:00 - 18:00 September 13, 2017, 9:00 - 12:30 Workshop proposals are welcome for either half-day or full-day workshops. Workshop costs: NEW THIS YEAR – FINANCIAL SUPPORT: For all accepted workshops the registration is free of charge for organizers and speakers. Organizers will also receive a waiver for the main conference fee. New this year: From the accepted workshops a maximum of ten workshops will be selected to each receive financial support of up to 1.500,00 €. For further information about the conference, please visit the conference website http://www.bernstein-conference.de. INSTRUCTIONS FOR WORKSHOP PROPOSALS PREPARATION Workshop proposals must contain: 1) Workshop Title 2) Concise description of workshop topic 3) List of potential speakers indicating speaker commitment Please use the Workshop Proposal Form that can be downloaded here: http://www.nncn.de/de/bernstein-conference/2017/satellite-workshops Deadline for submission of Workshop proposals: March 01, 2017 Accommodation and Hotel Reservation: We strongly recommend early room booking. The number of available accommodation is limited due to several concurrent events. We arranged for room contingents in a variety of hotels that you may book by yourself by email or phone. Please follow the instructions at our Accommodations Web-site (http://www.nncn.de/de/bernstein-conference/2017/venue/accommodation) We would like to emphasize that these room contingents will be held open up to different expiration dates depending on the hotel (or until they are filled). The earliest expiration date is already end of May 2017 whereas the majority of offers expire at the 12th of July 2017. We strongly encourage participants to share rooms and to book rooms as a group. Groups of three or four are possible if you book a suite. The room contingent contains a set of suits and apartments. We emphasize that it will be very difficult to book accommodation beyond the expiration dates. Please find a list of the hotels at our Accommodations Web-site. CONTACT: contact(at)bccn-goettingen.de We are looking forward to seeing you in Göttingen! WORKSHOP SELECTION COMMITTEE: Florentin Wörgötter (Chair) Marion Silies (co-Chair) Christian Tetzlaff (co-Chair) Matthias Bethge Laura Busse Claudia Clopath Julia Fischer Alexander Gail Richard Hahnloser Claus Hilgetag Peter Jonas Siegrid Löwel Michael Platt Viola Priesemann Nicole Rust Fred Wolf (Conference Chair) -- Dr Zrinka Gattin Bernstein Center for Computational Neuroscience (BCCN) Goettingen Bernstein Focus Neurotechnology (BFNT) Goettingen PhD Program in Theoretical and Computational Neuroscience Am Fassberg 17 D-37077 Goettingen Phone: +49 (0)551 5176 418 Fax: +49 (0)551 5176 14418 E-Mail: zrinka(a)nld.ds.mpg.de

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PhD opening in the neural mechanisms of decision making
by Simon Kelly Feb. 22, 2017

Feb. 22, 2017

Applications are invited for a fully funded 4-year PhD position in the Cognitive Neural Systems lab (https://cogneusys.com/) led by Simon Kelly, to study the neural mechanisms of decision making. This position is part of a project funded by Science Foundation Ireland, which involves a combination of psychophysics, computational modelling, non-invasive electrophysiology of human brain and muscle, and analyses of existing single-cell neurophysiological data. The funded research is specifically focused on the impact of value (i.e., how much decision outcomes are worth) on the dynamics of decision formation in sensory, decision, and motor areas of the brain. However, the overall PhD can be significantly broader in scope (including e.g. biomedical/translational applications), depending on the student’s interests within the broader research themes of the lab. The Cognitive Neural Systems lab is situated within the School of Electrical and Electronic Engineering in University College Dublin, Ireland, and has strong collaborative links to basic cognitive and clinical neuroscience research groups both locally (e.g. Trinity College Institute of Neuroscience) and internationally (e.g. City College and Columbia University in New York). The successful applicant will have ample opportunities for wider collaborations and the learning of a broad range of experimental, conceptual, analytic and computational skills. Applicants should have a BSc/B.E. or Masters degree in neuroscience, psychology, Electrical/biomedical engineering, computer science, or other related discipline and a demonstrable interest in cognitive neuroscience. The ideal candidate will be highly motivated and have excellent communication skills. Any prior experience in programming, psychophysics, EEG and/or modelling, especially in the area of cognitive neuroscience, is a definite advantage. To apply, submit a CV, short cover letter and contact information for at least two referees to Dr Simon Kelly (simon.kelly(a)ucd.edu) Candidates should explain in their cover letter how their own research interests fit specifically with those of the Kelly lab. ----------------------------------------------------------- Simon Kelly, Ph.D. Associate Professor School of Electrical and Electronic Engineering University College Dublin t: +353 (1) 716 1803 e: simon.kelly(a)ucd.ie -----------------------------------------------------------

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We have a wide range of posts open in Fudan Univ.
by jianfeng feng Feb. 22, 2017

Feb. 22, 2017

http://www.nature.com/naturejobs/science/jobs/606495-senior-research-fellow… -- -------------------------------------- J. Feng, Prof. of Biology, Computer Science, Medicine and Mathematics Warwick University, UK http://www.dcs.warwick.ac.uk/~feng Fudan University, PR China http://ccsb.fudan.edu.cn/

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Postdoc and PhD student for project on deep learning in artificial, human, and rodent brains
by Hans Op de Beeck Feb. 22, 2017

Feb. 22, 2017

Postdoc and PhD student for project on deep learning in artificial, human, and rodent brains For a project combining the domains of human functional neuroimaging, computational modelling, and rodent physiology, we are looking for two new collaborators. Hirings can be at the level of postdoc as well as PhD student. First, we look for a scientist to implement and further develop deep neural network modelling. The aim is to compare the representations in these artificial networks over the course of training with neural responses in human and rodent cortex. Here we build upon earlier work such as Kubilius et al. (2016, PLOS Comput. Biology). Candidates should have a background in computational neuroscience, computer vision, artificial intelligence, or related fields. Second, we look for a scientist to study the cortical basis of visual learning in awake rodents through extracellular recordings using electrode arrays. Relevant earlier studies from our lab in this domain are Vinken et al. (2014, J. Neurosci.) and Vinken et al. (2016, Cerebral Cortex). Candidates should have a background in Neurobiology, Neuroscience, Psychology, Biomedical sciences, Bioengineering or a related field. Independent of career stage (so also for incoming PhD students), only candidates will be considered that have a quantitative and computational background including expertise with Matlab, good social skills and team spirit, and good communication skills in English (oral and written). For PhD students, we expect a competitive study record putting the student among the top students in an internationally competitive program. For postdocs, we expect a relevant and competitive publication record (e.g., in computational and systems neuroscience) including first-author peer-reviewed publications. The research will be implemented in the research group of Hans Op de Beeck in the Laboratory of Biological Psychology at the University of Leuven (KU Leuven, Belgium). The research group focuses upon multidisciplinary work, including human neuroscience research with functional magnetic resonance imaging, rodent behaviour & electrophysiology, and computational modelling. Many members of the group come from countries outside Belgium (e.g., Canada, Brasil, South-Korea, Italy, Belarus), and the professional language is English. The city of Leuven is an old, medieval city which is very lively thanks to a large population of students and researchers. Leuven is at 25 km from Brussels, with frequent direct train connections, also to the international airport of Brussels (20 minutes by train). The university is one of the oldest in the Low Countries (founded in 1425) and is ranked in the top 50 of universities worldwide (THE ranking). It is home to a large community of systems/cognitive/visual/computational neuroscientists. Applications should be submitted before March 8th 2017. Funding is available for up to 3 (postdoc) or 4 (PhD student) years. The starting date is flexible between May and October 2017. Informal queries for further information can be sent to hans.opdebeeck(a)kuleuven.be<mailto:hans.opdebeeck@kuleuven.be> . For the formal application, applicants should go to https://icts.kuleuven.be/apps/jobsite/vacatures/54073261. The site will ask for a motivation letter (please include contact information for 2 references) and a CV (please include a list of publications if applicable). --- Prof. Dr. Hans P. Op de Beeck Professor in Brain & Cognition Program Director of KU Leuven Bachelor Psychology Laboratory of Biological Psychology University of Leuven (KU Leuven), Belgium Tiensestraat 102, 3000 Leuven, Belgium Email: hans.opdebeeck(a)kuleuven.be<mailto:hans.opdebeeck@kuleuven.be> Website: http://ppw.kuleuven.be/home/english/research/lbp/lbpMembers/00029058

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Connectomics. Advanced Course. Siena, Tuscany April 22-29, 2017
by Francesca Martini/NSAS Feb. 22, 2017

Feb. 22, 2017

Dear All, The last few seats remain for: Advanced Course Connectomics Neuroscience School of Advanced Studies Certosa di Pontignano, Siena, Tuscany April 22-29, 2017 <http://www.nsas.it/courses-workshops/advanced-courses/connectomics/> http://www.nsas.it/courses-workshops/advanced-courses/connectomics/ Coordinator: Sean Hill École Polytechnique Fédérale & The Blue Brain Project, Lausanne, Switzerland Faculty include: Julie Harris, Allen Institute for Brain Science, Seattle. USA Michael Milham, Child Mind Institute, New York, USA Fabrizio de Vico Fallani, Inria & Institut du Cerveau et de la Moelle, Paris, France Patric Hagmann, University of Lausanne, Switzerland Marcello Massimini, University of Milan, Italy Viktor Jirsa, Aix-Marseille University, France Sean Hill, École Polytechnique Fédérale & The Blue Brain Project, Lausanne, Switzerland This Advanced Course will focus on multi-scale aspects of the connectome the comprehensive wiring diagram of the brain and its impact on brain function, behavior and health. Ion channels, receptors, cells and synapses breathe dynamics into this wiring diagram and give rise to sensory responses, perceptions, decisions, memories and actions. When we fall into a deep dreamless sleep, our connectome doesnt change, nor does it change when we experience the vivid hallucinations of dreams. Yet it is the substrate of human experience disrupting the connectome gives rise to neurological deficits or disorders. Emphasis will be placed on the latest techniques of large-scale data acquisition, analysis, theory, modeling and simulation. The Advanced Course will cover 1) the cellular basis of connectivity including gene expression, morphology and electrophysiology, 2) large-scale data gathering and data analysis of whole brain connectivity across scales including electron microscopy, single neurons, meso-scale viral tracers, diffusion and functional whole brain imaging; 3) data integration of multimodal connectome data; 4) data-driven computational modeling and simulation at different scales of brain circuitry; 5) theoretical analyses of brain network topology and principles of connectivity; 6) the development of the connectome and its link to behavior and neurological disorders; 7) predicting whole brain dynamics from the connectome; 8) wakefulness, sleep and disorders of consciousness: the relationship between the connectome and the diversity of brain states and experiences. Course Format <http://www.nsas.it/courses-workshops/course-format/> http://www.nsas.it/courses-workshops/course-format/ Application Form <http://www.nsas.it/courses-workshops/application-form/> http://www.nsas.it/courses-workshops/application-form/ Kind regards, Francesca The Course Secretariat Neuroscience School of Advanced Studies Certosa di Pontignano Via di Pontignano 5, Castelnuovo Berardenga, Siena. Italy Tel. +39.0577.146.0003

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Postdoctoral Positions in Machine Learning and Neuromodulation at Emory University and Georgia Tech
by Babak Mahmoudi Feb. 22, 2017

Feb. 22, 2017

Postdoctoral positions are available at Emory University School of Medicine and Georgia Institute of Technology on developing machine learning algorithms and data analytics tools for the optimization of neuromodulation therapies for epilepsy and memory. The successful candidate will collaborate with scientists and clinicians in the Departments of Biomedical Informatics, Neurosurgery, Neurology and Biomedical Engineering at Emory University and Georgia Tech, Grenoble University at France, and medical device industry partners. The ideal candidate will have a PhD in Computer Science, Biomedical Engineering, Computational Neuroscience or related fields with a strong background in machine learning, optimization theory, multivariate analysis and signal processing. Programming skill sets in Matlab and other languages (e.g., C++ and python) would be key to a successful candidate. Inquiries should be addressed to Babak Mahmoudi (b.mahmoudi(a)emory.edu) The initial appointment is for one year, renewal expected if progress is satisfactory and funds are available. Please send applications including a CV, statement of research interests, and the names and full contact details of three references to b.mahmoudi(a)emory.edu

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Post-doc proposal: Charting the human brain with fMRI
by Ana Luísa Pinho Feb. 22, 2017

Feb. 22, 2017

Please find enclosed a post-doc proposal for an original "exhaustive cognitive mapping" performed in the framework of the Human Brain Project. *Duration & salary*: 12 months renewable up to 3 years, about 2100 enet monthly *Research teams*: Parietal (INRIA Saclay) and Unicog (INSERM), located at Neurospin, Saclay,France. *Responsible:* Bertrand Thirion. Contact: bertrand.thirion(a)inria.fr *Application*: Interested candidate should send CV and motivation letter. The post-doc will be in charge of setting a set of protocols up and running to pass them on the existing pool of 12 subjects of the Individual Brain Charting project. These protocols will be provided by the community (potentially from in-house developments) are meant to cover a large array of sensory, motor and cognitive processes. The post-doc will take part to the set of acquisitions performed on Neurospin 3T scanner at high resolution (1.5mm) and analyze the data by using a pipeline provided by the lab. Detailed reports will be provided to assess the quality of the data, motivate the participants and document the content of the database. These reports will provide extensive information on the functional organization of the brain in each individual, which will furthermore be confronted to other imaging modalities, e.g. anatomical and functional connectivity. Complex alignment procedures will then be carried out to obtain a population-level mapping that will lead to the first data-based cognitive atlas of the human brain. The data and atlas and analysis material will be released publicly. See https://team.inria.fr/parietal/files/2011/07/post-doc_ibc-1.pdf for details.

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Postdoctoral position in computational neuroscience in New York
by Ruben Coen-Cagli Feb. 21, 2017

Feb. 21, 2017

Postdoctoral position in the Coen-Cagli Laboratory Albert Einstein College of Medicine, New York, NY I will be at Cosyne and available to meet with candidates there. I am looking for a highly creative and motivated postdoctoral fellow to work in the field of computational and systems neuroscience in my lab at the Department of Systems and Computational Biology and Department of Neuroscience, Albert Einstein College of Medicine (AECOM) in New York City. The lab studies how biological sensory systems interpret the surrounding environment. Topics include probabilistic representations of natural images; models of selectivity and variability in large cortical populations; the perceptual consequences of neuronal variability; and uncertainty in visual and auditory perception. We combine theories of probabilistic neural coding, tools from computer vision and machine learning, psychophysics, and neurophysiology through collaborations. The candidate is expected to perform research related to these topics. Close interaction and collaboration with other members of the department is anticipated. https://sites.google.com/site/rubencoencagli/ Applicants must have a Ph.D. in a relevant discipline, with an academic record of scientific excellence and independent research. Prior experience should include areas such as computational neuroscience, machine learning, computer vision, or statistics. Experience with psychophysics experiments is a plus. Applicants should have a keen interest in interdisciplinary approaches to biological and neural systems. AECOM offers a vibrant interdisciplinary environment, with a growing systems and computational contingent. It is located in a quiet neighborhood of New York, only a short subway ride from Manhattan. Information about working at the AECOM, including benefits and housing for postdocs, can be found at: https://www.einstein.yu.edu/research/belfer-institute/ The position starts in summer 2017, and is funded for several years, with an initial one-year appointment and expectation of extension given satisfactory performance. Salary is competitive and will be commensurate with experience. Candidates should send a single pdf file, consisting of a 1-page motivation letter, CV, and publication list to ruben.coencagli(a)gmail.com. Furthermore, candidates should organize two letters of reference, to be sent to the same e-mail address. The position is open until filled. Albert Einstein College of Medicine, Inc. is an equal opportunity employer committed to hiring minorities, women, individuals with disabilities and protected veterans. Ruben Coen Cagli, PhD Department of Systems and Computational Biology, and Dominick Purpura Department of Neuroscience Albert Einstein College of Medicine 1300 Morris Park Ave. Price 353B Bronx, 10461. NY office: +1.718.678.1150 web: https://sites.google.com/site/rubencoencagli/

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NeuroBridges 2017 (Second Call)
by ahmed el hady Feb. 20, 2017

Feb. 20, 2017

*NeuroBridges 2017 Summer school , Cluny, France* *(** September 3 - September 14, 2017 )* *NeuroBridges* is an initiative that was founded to bring Mediterrenean and Middle Eastern neuroscientists in an event to discuss science and promote mutual understanding. The two first events of the series took place in Goettingen, Germany in July 2014 (http://elsc.huji.ac.il/ content/neurobridges) and in Paris, France, in September 2015 ( http://elsc.huji.ac.il/content/second-neurobridges-meeting) Each of these three days events brought together twenty young speakers, Palestinians, Egyptians, Jordanians, Syrians and Israelis, as well as several speakers from the hosting countries. Nobel Laureate Erwin Neher opened NeuroBridges in 2014. Stanislas Dehaene, professeur au College De France and member of the French Academy of Sciences gave the opening lecture in NeuroBridges 2015. *NeuroBridges 2017* (http://decision-making-lab.com/NeuroBridges/ neurobridges2017.html) will be a ten days summer school. Students will attend lectures delivered by a group of leading neuroscientists, experimentalists as well as theoreticians, which will address the fundamental questions of contemporary neuroscience. In addition to the lectures, the students will work in groups on small research projects. The school is intended for graduate students and postdocs, primarily from the Middle East and the Mediterranean region either working in their home countries or abroad. We will consider applicants with some background in applied mathematics, computer science, electrical engineering or physics, interested in theoretical brain and cognitive sciences. We will also consider those with biological or medical background given that they show proof of basic mathematical knowledge (i.e. linear algebra, calculus, in particular ordinary differential equation). Through the online application system (can be accessed through: http://decision-making-lab.com/NeuroBridges/neurobridges2017.html ) , you will be asked to provide personal details, academic background, the names of two referees , a motivation letter that should include a paragraph about your quantitative skills and a CV. The school will take place between September 3 and September 14, 2017 in Le Centre de Conférences Internationales de Cluny (CCIC) <http://www.ccic.eu/index.html>. Cluny is a small medieval town in Burgundy, France, located about 400km southeast of Paris (accessible by fast train, TGV). All costs of registration and accommodation will be covered by the organizers. A limited number of travel grants will also be available. The application deadline is March 31st 2017. *NeuroBridges* is co-organized by Ahmed El Hady <http://scholar.princeton.edu/ahmedelhady/home>(Princeton Neuroscience Institute, USA), Yonatan Loewenstein <http://elsc.huji.ac.il/loewenstein/home> (Hebrew University of Jerusalem, Israel) and David Hansel <https://neurophys.biomedicale.parisdescartes.fr/members/david-hansel>(CNRS, Paris, France). *2017 Confirmed Faculty (check the website regularly for updated faculty list):* Carl van Vreeswijk (CNRS) <https://neurophys.biomedicale.parisdescartes.fr/members/carl-van-vreeswijk/> Gianluigi Mongillo (CNRS) <https://neurophys.biomedicale.parisdescartes.fr/members/gianluigi-mongillo/> Shaul Druckmann (Janelia) <https://www.janelia.org/people/shaul-druckmann> Yoram Burak (Hebrew University) <http://elsc.huji.ac.il/burak/home> Omri Barak (Technion) <http://neuroscience.technion.ac.il/researcher/19> Najib Majaj (NYU) <https://www.researchgate.net/profile/Najib_Majaj> Farzan Nadim (NJIT) <https://biology.njit.edu/people/nadim.php> Valerie Ego-Stengel (CNRS) <https://www.unic.cnrs-gif.fr/teams/Research%20group%20of%20Daniel%20Shulz> If you have any questions, please do not hesitate to email Ahmed El Hady (email: ahady(a)princeton.edu )

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PhD post in Computational Neuroscience
by McDaid, Liam Feb. 20, 2017

Feb. 20, 2017

Dear all, A PhD position in Computational Neuroscience is available at the Ulster University where the closing date for applications is Friday 24th February 2017. The position is fully funded with a start date of October 2017. Project title: A Computational Model of Regulating Neuronal Excitability by GABA Neurons The successful candidate will be based at Ulster working within the Intelligent Systems Research Centre (ISRC) and the position will involve close collaboration with colleague at University College London and the University of Manchester. The project will build on recent findings where it was shown that the GAT3 transporter facilitates the uptake of extracellular GABA and this is accompanied by a large increase in intracellular Na+ concentration, which can reverse the Na+/Ca2+ exchanger causing an intercellular increase in Ca2+. This may have an important role in regulating blood flow and also can result in the release of gliotransmitters, which is believed to modulate synaptic strength and transmission. Moreover, it is now believed that GAT3 induces a rise in extracellular adenosine that acts at presynaptic adenosine receptors and this is likely to cause a decrease in secondary messengers within cells. This is a completely novel mechanism of glia-neuron communication and capturing this interaction will be the major focus of this PhD. This exciting project will require the graduate to collaborate with experimental neuroscientists in the development of computational models of the above GABA mediated interactions and therefore at the end of the PhD study period he/she will expect to have gained significant expertise in computational modelling and neuroscience. We would also like to encourage international applicants. For more information on how to apply go to: https://www.ulster.ac.uk/faculties/computing-and-engineering/schools/resear… ________________________________ This email and any attachments are confidential and intended solely for the use of the addressee and may contain information which is covered by legal, professional or other privilege. If you have received this email in error please notify the system manager at postmaster(a)ulster.ac.uk and delete this email immediately. Any views or opinions expressed are solely those of the author and do not necessarily represent those of Ulster University. The University's computer systems may be monitored and communications carried out on them may be recorded to secure the effective operation of the system and for other lawful purposes. Ulster University does not guarantee that this email or any attachments are free from viruses or 100% secure. Unless expressly stated in the body of a separate attachment, the text of email is not intended to form a binding contract. Correspondence to and from the University may be subject to requests for disclosure by 3rd parties under relevant legislation. The University of Ulster was founded by Royal Charter in 1984 and is registered with company number RC000726 and VAT registered number GB672390524.The primary contact address for Ulster University in Northern Ireland is Cromore Road, Coleraine, Co. Londonderry BT52 1SA

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Postdoctoral position modeling gamma synchrony in Carmen Canavier's lab
by Canavier, Carmen C. Jan. 25, 2017

Jan. 25, 2017

Description A Senior Postdoctoral Researcher position is available in the area of Computational Neuroscience in the Department of Cell Biology and Anatomy, LSU Health New Orleans in the lab of Dr. Carmen Canavier. The main project will take an existing model of interneuronal network gamma (ING) and embed it within a network of hippocampal pyramidal neurons in order to build a model of pyramidal-interneuronal gamma (PING). The project will include both theoretical and empirical analyses of the synchronization properties of these networks, and in particular the contribution of intrinsic neuronal properties as compared to synaptic properties. These analyses require knowledge of linear and nonlinear systems theory, probability theory and signal processing. The project will require programming in python and the simulation package NEURON to run parallelized simulations on a Linux cluster. This position will include administering the lab’s computational cluster and mentoring both graduate and undergraduate students. Qualifications * Ph.D. in Engineering, Mathematics, Neuroscience, Physics, Computer Science or a related field of study * At least three (3) years of experience in computational neuroscience Preferred Qualifications * Writing code, running the simulation package NEURON, using single neuron models * Signal processing experience and familiarity with nonlinear dynamics Applicant Instructions Qualified applicants should submit curriculum vitae and three letters of reference using the following link https://www.lsuhsc.edu/Administration/hrm/CareerOpportunities/Home/Detail/1…

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Symposia on Memory, March 6-10 in Barcelona
by Alex Roxin Jan. 25, 2017

Jan. 25, 2017

Dear all, This is a reminder that there will be a week-long series of Symposia on Memory at the Centre de Recerca Matemàtica this coming March 6-10. We will focus on a different topic each day, e.g. molecular and synaptic basis of memory, circuit mechanisms, cortex and hippocampus, and so on. There will be both experimental and theoretical talks; please look at the schedule if you are curious. You can view the schedule and register here http://www.crm.cat/en/Activities/Curs_2016-2017/Pages/MATHMEM_Symposia.aspx There is a special, reduced fee, single day registration if you cannot attend the full meeting. Note that the final day of the program will take place at the Institut d'Estudis Catalans, a historic building in the heart of Barcelona, right next door to where Santiago Ramón y Cajal taught medicine! You can still submit abstracts for a poster or a contributed talk of which there will be a limited number. The deadline for submission is the -31st of January-. I hope to see you in Barcelona. best regards, Alex

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Call for abstracts, symposia and registration for CNS 2017 in Antwerp, Belgium
by Daniele Marinazzo Jan. 24, 2017

Jan. 24, 2017

Dear all it's our pleasure to inform you that the site for the 26th Annual Computational Neuroscience Meeting is now up and running for submissions of papers and symposia proposals, and for registration. Please visit http://www.cnsorg.org/cns-2017 for all the info on the conference. We also have a twitter account https://twitter.com/CNS2017Antwerp Looking forward to seeing you in beautiful Antwerp from July 15th to 20th, for what will be a great meeting! On behalf of all the organizers Daniele -- Daniele Marinazzo -- Department of Data Analysis Faculty of Psychology and Pedagogical Sciences, Ghent University Henri Dunantlaan 1, B-9000 Ghent, Belgium +32 (0) 9 264 6375 <http://www.da.ugent.be/>http://users.ugent.be/~dmarinaz/ https://twitter.com/dan_marinazzo http://helpdesk.ugent.be/e-maildisclaimer.php

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Sense 2 Synapse 2017 Conference, Saturday April 8th, The Rockefeller University, New York City, Registration Open
by Christoph Kirst Jan. 24, 2017

Jan. 24, 2017

Dear Neuroscience Community, we like to invite you to join us for this year's *Sense 2 Synapse *which will be held on Saturday, *April 8th, 2017* in the Carson Family Auditorium at *The Rockefeller University, New York City *! The conference is an annual event for scientists working on the biology of sensory transduction, subsequent neural processing and perception. With *Larry Abbott *(Columbia University), *Nicole Rust* (University of Pennsylvania),****Sarah Woolley**(Columbia University) and*Gaby Maimon* (The Rockefeller University) we have a great list of key-note speakers, which will be complemented by talks selected from abstract submissions and a poster session. More information found on our website: *http://sense2synapse.com/ <https://urldefense.proofpoint.com/v2/url?u=http-3A__sense2synapse.com_&d=Dw…> * and you can register here: *http://www.sense2synapse.com/registrationForm <https://urldefense.proofpoint.com/v2/url?u=http-3A__www.sense2synapse.com_r…>* Join us for a great day of science, discussions and nice food ! The organizing team Christoph Kirst Florian Berger Jeremie Barral Gonzalo Otazu Nicolas Renier -- Christoph Kirst Fellow for Physics and Biology Center for Theoretical Studies and Kavli Physics Fellow Kavli Neural Systems Institute The Rockefeller University 1230 York Avenue, New York, NY 10065 USA +1 212 327 7561 :: ckirst(a)rockefeller.edu

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