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2019 NEURON Summer Course
by Carnevale, Nicholas 07 May '19

07 May '19

A few seats remain open for the 2019 NEURON Summer Course, but you'll have to act quickly because the registration deadline is Friday, May 31, and no applications will be accepted after that date. This year's course will be held at the Minneapolis campus of the University of Minnesota (UMN) from Monday, June 10, through Saturday, June 15. It provides a thorough introduction to computational modeling of neurons and networks with NEURON, and is suitable for individuals at all levels of expertise. UMN has made a limited number of private and semiprivate rooms in graduate student housing available to course registrants at very affordable rates; further information will be provided to applicants upon payment of the course's registration fee. For more information and the on-line registration form, see https://neuron.yale.edu/neuron/static/courses/summer2019/summer2019.html --Ted

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7th Baltic-Nordic School on Neuroinformatics BNNI 2019, August, Frankfurt Germany
by Martin Mittag 06 May '19

06 May '19

*7th Baltic-Nordic School on Neuroinformatics BNNI 2019* *Modeling Healthy and Diseased Brain: From Dendrites to Neurons and Networks*** *Frankfurt am Main, Germany* *26-28 August 2019* ** *We invite* Advanced master students, doctoral students, and postdoctoral researchers are welcome to participate in the BNNI 2019 to be held at the FIAS, the Frankfurt Institute for Advanced Studies, Frankfurt Main, Germany in August 2019. *The Course* The course is interdisciplinary and covers modeling at different levels of organization of the brain, from single neurons to microcircuits and networks. We will focus on differences between healthy and diseased brains. Participants will learn about compartmental and morphological modeling of synapses, dendrites and neurons, as well as simulating local field potentials (LFPs). The course combines lectures, tutorials and computer exercises. This summer school is the seventh in the series of the Baltic-Nordic Courses on Neuroinformatics (BNNI 2013 in Kaunas, Lithuania; BNNI 2014 in Tampere, Finland; BNNI 2015 in Tartu, Estonia; BNNI 2016 in Warsaw, Poland; BNNI 2017 in Kaunas, Lithuania; BNNI 2018 in Ventspils, Latvia). *Target audience* The target audience of the course will be advanced master students, doctoral students and postdoctoral researchers in biomedical and technology sciences, from medicine, biology, psychology, to mathematics, informatics, information technology, physics, chemistry, who would like to get an introduction to neuroinformatics and computational neuroscience. Some experience with programming and quantitative reasoning as well as strong interest in computational and mathematical modeling of the brain will be desirable but not necessary to benefit from the school. We will use the NEURON simulation environment for biophysical realistic models of neurons and the Matlab software package including the TREES toolbox. Desktop computers will be provided for the exercise part. *Important Dates* * 15 May 2019*: Application deadline * 1 June 2019:* Acceptance notification *26 - 28 August 2019:* School *Venue* The lectures will be held on 26th to 28th of August, 2019, at the: Frankfurt Institute for Advanced Studies, Ruth-Moufang-Straße 1, 60438 Frankfurt am Main, Germany. Frankfurt is a very international city in the heart of Germany and Europe. The city centre combines the historic, medieval past with the modern, economic present. We are looking forward to welcoming you in Frankfurt! *More information and applications at* _web.lsmuni.lt/bnni2019/en <http://web.lsmuni.lt/bnni2019/en>_ *Practical arrangements* The organizers will provide teaching materials, meals and coffee during the course. The participants are expected to cover their travel and health insurance expenses. There is a small fee to be paid (30 - 100 EUR). If you are not sure whether you can afford it, apply anyway. We have some stipends for members of OCNS (www.cnsorg.org) to give away. Student residence is provided and close to the campus in the Relexa hotel. *Faculty includes* Marja-Leena Linne, Faculty of Medicine and Health Technology, Tampere University, Tampere, Finland Bruce Graham, Institute of Mathematics and Informatics, University of Stirling, UK Ausra Saudargiene, Neuroscience Institute, Lithuanian University of Health Sciences, Kaunas, Lithuania Arnd Roth, Wolfson Institute of Biomedical Research, University College London, UK Misha Tsodyks, Department of Neurobiology, Weizmann Institute of Science, Israel Dieter Jäger, Biology Department, Emory University, Atlanta, USA Gaute Einevoll, Norwegian University of Life Sciences & University of Oslo, Norway Matthew Larkum, Neurocure Cluster of Excellence, Humboldt University, Berlin, Germany Daniel Wojcik, Nencki Institute of Experimental Biology, Warsaw, Poland Hermann Cuntz, ESI & FIAS, Frankfurt, Germany Peter Jedlicka, ICAR3R, Justus Liebig University Gießen, Germany Gilles Laurent, MPI for Brain Research, Frankfurt, Germany Jochen Triesch, FIAS, Frankfurt, Germany Tatjana Tchumatchenko, MPI for Brain Research, Frankfurt, Germany Julijana Gjorgjieva, MPI for Brain Research, Frankfurt, Germany Arvind Kumar, KTH Royal Institute of Technology, Stockholm, Sweden Aiste Pranckeviciene, Lithuanian University of Health Sciences, Kaunas, Lithuania Viola Priesemann, MPI Göttingen, Germany Matthias Kaschube, FIAS, Frankfurt, Germany *Organizing committee* **** **Peter Jedlicka, ICAR3R, Justus Liebig University Gießen, Germany Ausra Saudargiene, Neuroscience Institute, Lithuanian University of Health Sciences, Kaunas, Lithuania Marja-Leena Linne, Faculty of Biomedical Sciences and Engineering, Tampere University of Technology, Tampere, Finland Jochen Triesch, FIAS, Frankfurt, Germany * We are looking forward to welcoming you at the BNNI 2019 in Frankfurt am Main, Germany!*

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NEST Conference 2019 / Registration Deadline 15 May / Extended Poster Deadline 15 May
by Hans Ekkehard Plesser 06 May '19

06 May '19

Dear Colleagues! We are looking forward to an exciting NEST Conference 2019 at NMBU, Ås, Norway on 24-25 June 2019 with talks covering a wide range of topics from simulation technology to large-scale network simulations as shown below. Please register at https://www.nest-initiative.org/conference by Wednesday, 15 May 2019 We still have a few slots for conference posters available, so you are still welcome to submit your poster until 15 May. Please see the conference website for instructions. We are looking forward to seeing you in Ås in June! Hans Ekkehard Plesser, Susanne Kunkel & Dennis Terhorst NEST Conference 2019 Talks (only presenting author shown) • GeNN: GPU-enhanced neural networks (James Knight) • Communication sparsity in distributed Spiking Neural Network Simulations to improve scalability (Carlos Fernandez-Musoles) • Sleep-like slow oscillations induce hierarchical memory association and synaptic homeostasis in thalamo-cortical simulations (Cristiano Capone) • Implementation of a Frequency-Based Hebbian STDP in NEST (Alberto Antonietti) • Spike Timing Model of Visual Motion Perception and Decision Making with Reinforcement Learning in NEST (Petia Koprinkova-Hristova) • What’s new in the NEST user-level documentation (Jessica Mitchell) • ICEI/Fenix: HPC and Cloud infrastructure for computational neuroscientists (Jochen Eppler) • Construction and characterization of a detailed model of mouse primary visual cortex (Stefan Mihalas) • Large-scale simulation of a spiking neural network model consisting of cortex, thalamus, cerebellum and basal ganglia on K computer (Jun Igarashi) • Simulations of a multiscale olivocerebellar spiking neural network in NEST: a case study (Alice Geminiani) • A NEST CPG for pythonic motor control: Servomander (Harry Howard) • NEST desktop: A web-based GUI for NEST simulator (Sebastian Spreizer) • Tools for the Visual Analysis of Simulation Datasets (Óscar David Robles) • Neural Network Simulation Code for Extreme Scale Hybrid Systems (Kristina Kapanova) • NEST performance profiling (Susanne Kunkel) -- Prof. Dr. Hans Ekkehard Plesser Head, Data Science Section Faculty of Science and Technology Norwegian University of Life Sciences PO Box 5003, 1432 Aas, Norway Phone +47 6723 1560 Email hans.ekkehard.plesser(a)nmbu.no Home http://arken.nmbu.no/~plesser

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Postdoc opportunity in computational/human vision at the University of Toronto
by Dirk Bernhardt-Walther 05 May '19

05 May '19

University of Toronto, Bernhardt-Walther Lab and Semantic Technology Lab A Post-doctoral position in computational modeling of vision and knowledge acquisition is available with Dirk Bernhardt-Walther (Psychology) and Michael Grüninger (Mechanical and Industrial Engineering) at the University of Toronto. We seek a colleague who shares our interest in explaining how structured knowledge about the world arises through visual perception. The project combines formal logic in ontologies with perceptual grouping of visual elements in complex, real-world scenes. Optionally, the project may involve measuring brain activity using functional magnetic resonance imaging. The ideal candidate has a strong computational and mathematical background, experience with state-of-the-art computer vision techniques and/or a strong background in computational neuroscience. The ability to communicate with a diverse team of researchers from engineering and psychology is an essential prerequisite. Current state-of-the-art computational models of visual processing are trained to extract visual features of increasing complexity in a hierarchy of layers, choosing a label from a pretrained set of categories at the apex of the hierarchy. Such systems lack an important aspect of the human visual system – a notion of meaning of visual content. The project aims to develop a new model of visual perception, which integrates the generation of networks of meaning into all levels of the visual processing hierarchy, thus allowing structured visual knowledge to arise naturally from visual perception. Specifically, this will involve the generation of a large database of images of real-world scenes with detailed ontological annotations, development of data structures and algorithms for extracting such ontological structures automatically from images, and testing the viability of our new meaning-based model of vision for explaining aspects of human vision. The University of Toronto, typically ranked as one of the world’s top 20 research universities, is located in downtown Toronto. The city is one of the most livable and cosmopolitan cities in the world, and has a vibrant academic and information technology community. This full-time position includes benefits and is fully funded for two years, with an initial appointment of one year. There is also the possibility of extending the position beyond the first two funded years by applying for outside fellowships. The earliest start date is September 3rd, 2019. Applicants should submit a CV, brief research statement, relevant publications, and contact details for two academic references to the addresses below. Please contact us at either address below for more information. Contact Details: Dirk Bernhardt-Walther: bernhardt-walther(a)psych.utoronto.ca, bwlab.utoronto.ca Michael Grüninger: gruninger(a)mie.utoronto.ca, stl.mie.utoronto.ca https://bwlab.utoronto.ca/postdoc-opening/

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Job Opening in Juelich, Germany: PhD project: An approach to tracking the provenance of data acquisition and analysis in neuroscience
by Martina Reske 03 May '19

03 May '19

The Helmholtz School for Data Science in Life, Earth and Energy (HDS-LEE) provides an interdisciplinary environment for educating the next generation of data scientists in close contact to domain-specific knowledge and research. All three domains – life & medical sciences, earth sciences, and energy systems/materials – are characterized by the generation of huge heterogeneously structured data sets, which have to be evaluated in order to obtain a holistic understanding of very complex systems. Visit HDS-LEE at: www.hds-lee.de<https://www.hds-lee.de/> As a member of the Helmholtz Association, Forschungszentrum Jülich makes an effective contribution to solving major challenges facing society in the fields of information, energy, and bioeconomy. It focuses on varied tasks in the area of research management and utilizes large, often unique, scientific infrastructures. Come and work with around 5,900 colleagues across a range of topics and disciplines at one of Europe’s largest research centres. The institute The Institute of Neuroscience and Medicine (INM) at the Jülich Research Center in Germany investigates the structure and function of the brain. The department INM-6 consists of 6 groups that conduct research in the field of computational and systems neuroscience. The Statistical Neuroscience group headed by Prof. Sonja Grün develops computational methods to analyze the joint activity of neuronal networks, and applies these methods to experimental data in the context of international collaborations using state-of-the-art approaches from neuroinformatics. The group is hiring a Doctoral Student (m/f) to strengthen its international and interdisciplinary team. Your Job: - Conceptualization, development and implementation of a tool and services to capture provenance of advanced workflows for the analysis of electrophysiological neuroscience data from complex, high-dimensional experimental recordings of brain activity. - Implementation of version-controlled, provenance-tracked data/metadata processing and analysis workflows using state-of-the-art technologies along the FAIR principles. - Co-development of data types and object models, metadata schemata, ontologies and software tools to describe results data and provenance information for typical analysis scenarios in neuroscience. - Representing the technology at scientific conferences and courses, to the public, and within the EU Flagship Project “Human Brain Project”. Your profile - MSc. in natural sciences or computer science - Good expertise in Python. - Preferably knowledge in semantic web technologies relevant for data curation, ontologies and provenance (RDF, XML, JSON, SHACL, PROV,…), in version control and issue tracking systems, and in Linux; - Experience with electrophysiological data and corresponding acquisition/storage technologies - Excellent communication skills in English are mandatory: TOEFL or equivalent evidence of English-speaking skills - Outstanding organizational skills and the ability to work independently - A high level of scholarship as indicated, for example, by bachelor/master study transcripts and two reference letters - You are convincing with your confident attitude and good communication skills - Outstanding organizational skills and the ability to work independently - Very good cooperation and communication skills and ability to work as part of a team in an international and interdisciplinary environment Our offer - 3 year position - Continuous scientific mentoring by your scientific advisor - Chance of participating in (international) conferences - Further development of your personal strengths, e.g. via a comprehensive further training program - FZ Jülich does not award PhD tiles. Doctoral degree conferred by RWTH Aachen University - Exciting work setting on an attractive research campus with a very good infrastructure, ideally situated within the city triangle of Cologne, Düsseldorf, and Aachen - World class science environment at the interface between neuroscience and technology on the most complex known systems - Pay in line with 100 % of pay group 13 of the Collective Agreement for the Public Service (TVöD-Bund) - Unique HDS-LEE graduate school program - A position in a creative and international team that conducts research at the frontiers of science, themes ranging from computational neuroscience to simulation technology - The Jülich Research Center is one of the largest research centers in Europe, with excellent scientific equipment including the fastest supercomputer in Europe, is located on a green campus, and near the cultural centers Cologne, Düsseldorf, and Aachen/Aix-La-Chapelle - Outstanding scientific and technical infrastructure – ideal conditions for successfully completing a doctoral degree - Excellent scientific equipment including the fastest supercomputer in Europe Forschungszentrum Jülich aims to employ more women in this area and therefore particularly welcomes applications from women. We also welcome applications from disabled persons. Further information on HDS-LEE is available at: www.hds-lee.de<https://www.hds-lee.de/> Become a part of HDS-LEE and apply at [XXX] Apply until: 30th June 2019 Starting date: 1st August 2019 -- Dr. Martina Reske Scientific Coordinator Institute of Neuroscience and Medicine (INM-6) Computational and Systems Neuroscience & Institute for Advanced Simulation (IAS-6) Theoretical Neuroscience Jülich Research Centre and JARA Jülich, Germany Work +49.2461.611916 Work Cell +49.151.26156918 Fax +49.2461.619460 www.csn.fz-juelich.de<http://www.csn.fz-juelich.de> Office hours: TU & FR 9.00-17, WE & TH 9.00-13 ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Juelich GmbH 52425 Juelich Sitz der Gesellschaft: Juelich Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Dr. Karl Eugen Huthmacher Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender), Karsten Beneke (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt, Prof. Dr. Sebastian M. Schmidt ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------

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Kosice Neuroscience Workshop, 3 - 5 June, 2019
by Norbert Kopco 03 May '19

03 May '19

FINAL CALL! The 4th Workshop on */"Cognitive neuroscience of auditory and cross-modal perception"/* 3 - 5 June 2019 Kosice, Slovakia http://pcl.upjs.sk/workshop2019 *Objectives* ·This workshop will include research talks (and introductory lectures) on a range of topics related to the *neural processes of auditory, visual and cross-modal perception*. ·The main focus of this year’s workshop will be on *adaptation, learning and training in spatial perception and cognition*. ·The talks will illustrate the *multidisciplinary character of cognitive neuroscience research*, covering behavioral, neuroimaging, and modeling approaches, as well as applications of the research in auditory prosthetic devices. ·The workshop targets *early-stage and advanced students and young researchers*. It will provide ample opportunities for direct interactions between the lecturers and the attendees. The workshop will follow-up on our previous workshops organized in 2014, 2015 and 2017 <http://pcl.upjs.sk/workshop>. *Format* 1/2-day sessions, including invited talks, contributed talks, and posters, focusing on the topics of *Adaptation*,*Learning and training*, *Auditory and cross-modal perception (general)*, as well *vision and other topics in computational and cognitive neuroscience*. Non-scientific program (outings to tourist destinations near Kosice) will take place on the day before and day after the workshop. Invited talks and talks by ALT consortium (for details click here <https://pcl.upjs.sk/workshop-2019-talks/>): * *Jana Bašnáková, <https://pcl.upjs.sk/workshop-2019-talks#Jana_Basnakova>*Slovak Academy Of Sciences – “ ‘It’s hard to give a good talk’ – the neural correlates of interpreting implicit meaning” <https://pcl.upjs.sk/workshop-2019-talks#Jana_Basnakova> * *Robert Baumgartner,* <https://pcl.upjs.sk/workshop-2019-talks#Robert_Baumgartner>Austrian Academy of Sciences – “Effects of spatial auditory cue realism on selective attention control and future perspectives on studying perceptual learning of these cues across the human lifespan” <https://pcl.upjs.sk/workshop-2019-talks#Robert_Baumgartner> * *Virginia Best, <https://pcl.upjs.sk/workshop-2019-talks#Virginia_Best>*Boston University, USA – “Investigating a visually guided hearing aid” <https://pcl.upjs.sk/workshop-2019-talks#Virginia_Best> * *Lauren Calandruccio, <https://pcl.upjs.sk/workshop-2019-talks#Lauren_Calandruccio>*Case Western Reserve University, USA – “Masked-sentence recognition: the effect of target and masker speech similarity” <https://pcl.upjs.sk/workshop-2019-talks#Lauren_Calandruccio>** * *Inyong Choi, <https://pcl.upjs.sk/workshop-2019-talks#Inyong_Choi>*The University of Iowa, USA – “Adapting to simultaneous electric and acoustic stimulation for word-in-noise recognition in listeners with single-sided deafness” <https://pcl.upjs.sk/workshop-2019-talks#Inyong_Choi> * *John Culling, <https://pcl.upjs.sk/workshop-2019-talks#John_Culling>*Cardiff University, UK – “Speech intelligibility in rooms” <https://pcl.upjs.sk/workshop-2019-talks#John_Culling> * *Erick Gallun, <https://pcl.upjs.sk/workshop-2019-talks#Erick_Gallun>*National Center for Rehabilitative Auditory Research, USA – ”Flipping the laboratory: Clinical research tools for bringing psychoacoustical testing to the patient” <https://pcl.upjs.sk/workshop-2019-talks#Erick_Gallun> * *Andrej Kráľ, <https://pcl.upjs.sk/workshop-2019-talks#Andrej_Kral>*Hannover Medical School, Germany – “Effective Connectivity Between Primary and Secondary Cortical Areas is Shaped by Early Hearing” <https://pcl.upjs.sk/workshop-2019-talks#Andrej_Kral> * *Norbert Kopčo, <https://pcl.upjs.sk/workshop-2019-talks#Norbert_Kopco>*P.J. Šafárik University, Slovakia – “Adaptation to Reverberation in Speech and Distance Perception” <https://pcl.upjs.sk/workshop-2019-talks#Norbert_Kopco> * *Bernhard Laback, <https://pcl.upjs.sk/workshop-2019-talks#Bernhard_Laback>*Austrian Academy of Sciences – “Re-weighting of binaural cues based on visual feedback” <https://pcl.upjs.sk/workshop-2019-talks#Bernhard_Laback> * *Piotr Majdak, <https://pcl.upjs.sk/workshop-2019-talks#Piotr_Majdak>*Austrian Academy of Sciences – “Computational models for listener-specific predictions of spatial audio quality” <https://pcl.upjs.sk/workshop-2019-talks#Piotr_Majdak> * *Petr Maršálek, <https://pcl.upjs.sk/workshop-2019-talks#Petr_Marsalek>*Charles University, Czech Republic – “Just noticeable differences in low frequencies below 500 Hz, loudness, localization; model and psychophysics” <https://pcl.upjs.sk/workshop-2019-talks#Petr_Marsalek> * *Catarina Mendonca, <https://pcl.upjs.sk/workshop-2019-talks#Catarina_Mendonca>*University of Azores, Portugal – “Changes in auditory space following audiovisual experience” <https://pcl.upjs.sk/workshop-2019-talks#Catarina_Mendonca> * *Josefa Oberem, <https://pcl.upjs.sk/workshop-2019-talks#Josefa_Oberem>*RWTH Aachen University, Germany – “Examining auditory selective attention in complex acoustic environments” <https://pcl.upjs.sk/workshop-2019-talks#Josefa_Oberem> * *John van Opstal, <https://pcl.upjs.sk/workshop-2019-talks#John_Van>*Radboud University, Netherlands – “Perceived Target Range Shapes Human Sound-Localisation Behaviour” <https://pcl.upjs.sk/workshop-2019-talks#John_Van> * *Nelli Salminen, <https://pcl.upjs.sk/workshop-2019-talks#Nelli_Salminen>*Aalto University, Finland – “Neural correlates of human spatial hearing measured with EEG and MEG” <https://pcl.upjs.sk/workshop-2019-talks#Nelli_Salminen> * *Dan Sanes, <https://pcl.upjs.sk/workshop-2019-talks#Dan_Sanes>*New York University, USA – “Learning and attention enhance cortex neuron sensitivity during auditory task performance” <https://pcl.upjs.sk/workshop-2019-talks#Dan_Sanes> * *Aaron Seitz, <https://pcl.upjs.sk/workshop-2019-talks#Aaron_Seitz>*University of California, USA – “Gamifying Perceptual Learning” <https://pcl.upjs.sk/workshop-2019-talks#Aaron_Seitz> * *Filip Smolík, <https://pcl.upjs.sk/workshop-2019-talks#Filip_Smolik>*Academy of Sciences of the Czech Republic – “Adaptation and learning in early language acquisition” <https://pcl.upjs.sk/workshop-2019-talks#Filip_Smolik> * *Brigitta Tóth, <https://pcl.upjs.sk/workshop-2019-talks#Brigitta_Toth>*Hungarian Academy of Sciences – “Top-down and bottom-up attention bias on change detection in auditory foreground and background” <https://pcl.upjs.sk/workshop-2019-talks#Brigitta_Toth> * *Beverly Wright, <https://pcl.upjs.sk/workshop-2019-talks#Bev_Wright>*Northwestern University, USA – “Auditory perceptual learning” <https://pcl.upjs.sk/workshop-2019-talks#Bev_Wright> *Venue* Lecture hall 2.17T,Faculty of Science / Technicom building, P. J. Šafárik University, Jesenná 5, 04001 Košice Slovakia <https://goo.gl/maps/6m3GC3iJNeA2>. *Organizers* Norbert Kopčo, P. J. Šafárik University in Košice <https://pcl.upjs.sk/noro/> Erick Gallun, National Center for Rehabilitative Auditory Research, Portland and OHSU <http://www.ncrar.research.va.gov/AboutUs/Staff/gallun.asp>Piotr Majdak, Austrian Academy of Science, Vienna <https://www.kfs.oeaw.ac.at/index.php?option=com_content&view=article&id=56:…> Aaron Seitz, University of California, Riverside <http://faculty.ucr.edu/%7Easeitz/> *Travel, accommodation, visitor information* see workshop webpage: http://pcl.upjs.sk/workshop2019/ *Registration* The workshop is open to all interested students/scientists. Registration is free of charge but required. To register, please send an email to kogneuro(a)gmail.com stating your name and affiliation and the dates on which you are planning to attend. All accepted abstracts will be published on the workshop website. No proceedings will be published. In case you would like to have a presentation please send us an abstract (up to 200 words; also indicate whether you prefer poster or oral presentation) no later than *May 15, 2019*. This workshop is supported by theEU H2020-MSCA-RISE-2015 project #691229 <http://pcl.upjs.sk/grants/alt/>.

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Neural Modeling Postdoc Position At Emory University, Atlanta
by Jaeger, Dieter 02 May '19

02 May '19

A postdoctoral position is available for working in an NIH BRAIN initiative funded project on the role of the basal ganglia in motor decision making in behaving mice. The project aims to elucidate how subcortical structures feed back onto and influence cortical processing. The open position with a start date of Sept. 1, 2019 will involve biophysically detailed modeling of basal ganglia – thalamo-cortical interactions in the Jaeger lab at Emory University in Atlanta https://scholarblogs.emory.edu/jaegerlab/. An ongoing interaction with experimentalists is an important component of the project. Emory University presents a strong training environment in computational and systems neuroscience (e.g. http://livingtheory.emory.edu/ and http://biomed.emory.edu/PROGRAM_SITES/NS/research/computational-neuroscienc… ). The successful candidate needs previous computational modeling experience using the NEURON software and a strong background in the biophysics of neurons. Pay is according to the posted NIH NRSA schedule https://grants.nih.gov/grants/guide/notice-files/NOT-OD-19-036.html. If interested & qualified, please contact djaeger@emory. NOT-OD-19-036: Ruth L. Kirschstein National Research Service Award (NRSA) Stipends, Tuition/Fees and Other Budgetary Levels Effective for Fiscal Year 2019 - grants.nih.gov<https://grants.nih.gov/grants/guide/notice-files/NOT-OD-19-036.html> grants.nih.gov NIH Funding Opportunities and Notices in the NIH Guide for Grants and Contracts: Ruth L. Kirschstein National Research Service Award (NRSA) Stipends, Tuition/Fees and Other Budgetary Levels Effective for Fiscal Year 2019 NOT-OD-19-036. NIH Theory and Modeling of Living Systems<http://livingtheory.emory.edu/> livingtheory.emory.edu Welcome to the Theory and Modeling of Living Systems Initiative. The Theory and Modeling of Living Systems Initiative seeks to cultivate and expand research that builds theoretical frameworks for understanding living systems. Jaeger Lab at Emory – Systems Electrophysiology, Imagery and Computational Neuroscience - Emory University<https://scholarblogs.emory.edu/jaegerlab> scholarblogs.emory.edu Welcome to the Jaeger lab, Rollins Research Center, Department of Biology, Emory University, Atlanta, GA, U.S. Experimental and Computational Neurophysiology of Motor control under normal and pathological condition. Computational Neuroscience| GDBBS | Emory University<http://biomed.emory.edu/PROGRAM_SITES/NS/research/computational-neuroscienc…> biomed.emory.edu This area of research encompasses a diverse set of approaches in which mathematical or computational tools are used to better understand the nervous system. ________________________________ This e-mail message (including any attachments) is for the sole use of the intended recipient(s) and may contain confidential and privileged information. If the reader of this message is not the intended recipient, you are hereby notified that any dissemination, distribution or copying of this message (including any attachments) is strictly prohibited. If you have received this message in error, please contact the sender by reply e-mail message and destroy all copies of the original message (including attachments).

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Two Funded Postdoctoral Positions in Parkinson’s Disease Research and Intervention
by Yasser Iturria Medina 02 May '19

02 May '19

*Two Postdoctoral Fellows in Computational modeling and Precision Medicine applied to Parkinson’s Disease* We are looking for two highly motivated postdoctoral fellows, for joining the Neuroinformatics for Personalized Medicine lab (NeuroPM) at the Montreal Neurological Institute (McGill University, Montreal, Canada). The postdoctoral fellows will be under the supervision of Professor Yasser Iturria-Medina, and will be expected to collaborate with associated groups (e.g. Integrative Neuroscience Centre, Madrid, Spain). The projects, for 1.5 years and potentially extendable for another year, includes the analysis of multiple imaging modalities and therapeutic interventions in Parkinson’s disease, as well as the application of state-of-the-art brain computational models. The NeuroPM lab (http://www.neuropm-lab.com/) is affiliated with the Healthy brain for Healthy Lives (HBHL) initiative ( https://www.mcgill.ca/hbhl/) the Ludmer Center (http://ludmercentre.ca/) and the McConnell Brain Imaging Center (https://www.mcgill.ca/bic/) involving computationally intensive and interdisciplinary research on the brain. The MNI is an internationally renowned institution, characterized by the integration of research and patient care. Interested candidates should have a solid background in brain imaging and neurodegeneration. Experience in brain computational modeling will be an asset. Interested persons should send their CV, a cover letter stating research interests, and two reference letters. The fellows are expected to start as soon as possible. Salary: 45,000CAN$/year+25% in benefits. Contact: Yasser Iturria Medina, Email: iturria.medina(a)gmail.com -- Yasser Iturria Medina, PhD. Montreal Neurological Institute, McGill University Montreal, Canada H3A 2B4, Phone # 514-398-1524 Lab: http://www.neuropm-lab.com/

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A revised electromagnetic theory of the brain
by Patirniche, Dinu 02 May '19

02 May '19

Dear Colleagues, A common dogma of neuroscience is that all electrical events occurring in the brain are well described by an electrostatic theory. However, adopting a geometric attitude it becomes immediately clear that the propagation of an action potential induced a non-conservative electric field within nearby spines, and thus an electromagnetic description of the function of a brain is unavoidable. I would like to present to you with a revised and simplified version of the theory I advanced last year, entitled "Dynamic Aspects of Finite Architectures". The current work can be accessed here: doi.org/10.13140/RG.2.2.20738.73925 . Best, Dinu Patirniche.

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NeuroBridges 2019 School Announcement
by Ahmed El Hady 01 May '19

01 May '19

*/NeuroBridges 2019 Summer school , Cluny, France/* */( September 8th - September 19th, 2019)/* I would like to bring to your attention the *NeuroBridges 2019 Computational Neuroscience School*. <http://decision-making-lab.com/NeuroBridges/neurobridges2019.html> NeuroBridges <https://www.facebook.com/NeuroBridges/>is a one-of-a-kind series of scientific meetings in brain research, which brings together Mediterranean and Middle Eastern scientists, in order to promote international scientific cooperation in system and computational neuroscience. A major goal of this school is to serve as a bridge between experimental and theoretical neuroscientists, addressing system-level questions. This year the school will primarily focus on the neural basis and computational principles underlying sensory- motor tasks, in which the agent chooses from a small number of actions based on sensory and operant cues. *The forthcoming NeuroBridges 2019* will be a ten-day summer school. Students will attend lectures delivered by a group of leading neuroscientists, experimentalists as well as theoreticians, which will address the fundamental questions in the field of decision making. In addition to the lectures, the students will work in groups on small research projects. The school is intended for graduate students and postdocs, primarily (but not only) from the Middle East and the Mediterranean region either working in their home countries or abroad. We will consider applicants with some background in related fields in neuroscience or cognitive psychology. Through the online application system, you will be asked to provide personal details, academic background, a motivation letter that should include a paragraph about your quantitative skills and a CV. In addition, we request two recommendation letters. The school will take place between *September 8 and September 19, 2019* in Le Centre de Conferences Internationales de Cluny (CCIC) <http://www.ccic.eu/index.html>. Cluny is a small medieval town in Burgundy, France, located about 400km southeast of Paris (accessible by fast train, TGV). All costs of registration and accommodation will be covered by the organizers. A limited number of travel grants will also be available. *NeuroBridges* is co-organized by Ahmed El Hady <http://scholar.princeton.edu/ahmedelhady/home> (Princeton Neuroscience Institute, USA), Yonatan Loewenstein <http://elsc.huji.ac.il/loewenstein/home>(Hebrew University of Jerusalem, Israel) and David Hansel <https://neurophys.biomedicale.parisdescartes.fr/members/david-hansel/> (CNRS, Paris, France). Review of applications will end in May 2019. *2019 Faculty:* Merav Ahissar (Hebrew U.) <https://elsc.huji.ac.il/index.php?q=ahissar/home> Athena Akrami (UCL) <https://elsc.huji.ac.il/index.php?q=ahissar/home> Rafal Bogacz (Oxford) <https://www.ndcn.ox.ac.uk/team/rafal-bogacz> Thomas Boraud (CNRS) <http://www.inb.u-bordeaux2.fr/dev/EN/researcher.php?researcher=Thomas+Borau…> Mathew Diamond (SISSA) <https://phdcns.sissa.it/faculty/mathew-diamond> Ido Erev (Technion) <https://web.iem.technion.ac.il/en/people/userprofile/erev.html> Mehdi Khamassi (CNRS) <https://www.researchgate.net/profile/Mehdi_Khamassi> Najib Majaj (NYU) <https://www.researchgate.net/profile/Najib_Majaj> The deadline for application is *April 30th, 2019 *and the following is the website including the link for the online application: http://decision-making-lab.com/NeuroBridges/neurobridges2019.html <http://decision-making-lab.com/NeuroBridges/neurobridges2018.html> <http://decision-making-lab.com/NeuroBridges/neurobridges2018.html> For more information, please contactneurobridges2019(a)gmail.com <mailto:neurobridges2018@gmail.com>.

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postdoctoral position in computational neuroscience/mathematical biology
by Rubchinsky, Leonid L 01 May '19

01 May '19

NSF-supported postdoctoral position in mathematical biology/computational neuroscience in my group in the Department of Mathematical Sciences at Indiana University-Purdue University Indianapolis (IUPUI). This position involves research in the mechanisms and properties of intermittent synchronization in neural and other living systems including collaboration with experimentalists. The position offers excellent interdisciplinary training possibilities in computational neuroscience and mathematical biology. Applicants should have (or expected to get in a near future) Ph.D. in mathematics, physics, neuroscience, biomedical engineering, computer science, or another related field. Applicants should have strong quantitative skills, some experience in dynamical modeling and data analysis, and a strong interest in life sciences applications. Experience in nonlinear dynamics, computational neuroscience, and mathematical biology is a plus. Please apply via mathjobs.org at https://www.mathjobs.org/jobs/jobs/13879. Screening of applications will continue until position is filled. Please address informal inquires to Leonid Rubchinsky via e-mail: lrubchin(a)iupui.edu Leonid *********************** Leonid Rubchinsky, PhD Associate Professor Department of Mathematical Sciences, Indiana University - Purdue University, Indianapolis Stark Neurosciences Research Institute, Indiana University School of Medicine 402 N. Blackford St Indianapolis, IN 46202-3216 lrubchin(a)iupui.edu http://www.math.iupui.edu/~lrubchin 317-274-9745 317-274-3460 (fax) ***********************

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CORRECTION: US Air Force Young Investigator Research Program (YIP)
by GREENWALD, HAL S DR-04 USAF AFMC AFOSR/RTA 01 May '19

01 May '19

Announcement corrected below to note that doctorates must have been received NO EARLIER than April 1, 2012 (i.e., within the past 6 years, 11 months). --- The Air Force's annual Young Investigator Research Program (YIP) is an excellent way for new principal investigators in the US to accelerate their careers in basic research with three years of funding at up to $150,000 per year. Each year, every AFOSR portfolio can nominate one YIP recipient. Especially since the Cognitive & Computational Neuroscience portfolio is new this year, I wanted to make the neuroscience community aware of this opportunity (and also of the new portfolio). Unlike most of AFOSR's research grants that are open to researchers worldwide, YIP awards are limited to US persons (citizens, nationals, or permanent residents) with full-time, permanent positions at US institutions (by Oct. 1, 2019) who received their doctorates NO EARLIER than April 1, 2012. The application deadline for Fiscal Year 2020 awards is June 3, 2019. Program Description: The Air Force YIP supports scientists and engineers who have received Ph.D. or equivalent degrees within the last seven years and show exceptional ability and promise for conducting basic research. The objectives of this program are: 1. to foster creative basic research in science and engineering; 2. enhance early career development of outstanding young investigators; 3. and increase opportunities for the young investigator to recognize the Air Force mission and related challenges in science and engineering. Eligibility: Individual awards are made to U.S. institutions of higher education, industrial laboratories, or non-profit research organizations where the principal investigator (PI) is employed on a full-time basis and holds a regular position. YIP PIs must be a U.S. citizen, national, or permanent resident. Researchers working at a Federally Funded Research and Development Center or DoD Laboratory are not eligible for this competition. Research proposals must address Research Interests of the Air Force Office of Scientific Research, FA9550-19-S-0003, found at https://www.grants.gov/web/grants/view-opportunity.html?oppId=314753. Most YIP awards are funded up to $150,000 per year for three years, for a total of $450,000. Exceptional proposals will be considered individually for higher funding levels and/or longer duration. For more information about this funding opportunity, please see https://www.grants.gov/web/grants/view-opportunity.html?oppId=313523. Questions about YIP may be sent to afosryip(a)us.af.mil <mailto:afosryip@us.af.mil> . Sincerely, Hal Greenwald Hal S. Greenwald, Ph.D. Program Officer, Cognitive & Computational Neuroscience Air Force Office of Scientific Research (AFOSR/RTA) 875 N. Randolph St. Arlington, VA 22203-1768 (703) 588-8441

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Fully Funded PhD position: Machine learning for studying structural and functional connectivity of the brain, Trento (Italy)
by Emanuele Olivetti 30 Apr '19

30 Apr '19

Applications are invited for a fully-funded 4-years Ph.D. scholarship at the NeuroInformatics Laboratory (NILab), Italy. NILab is a joint collaboration between Fondazione Bruno Kessler ( https://www.fbk.eu/en/about-fbk/) and the Center of Mind and Brain Sciences (https://www.cimec.unitn.it/en/14/the-center) within the University of Trento, Italy. Title: Machine learning for studying structural and functional connectivity of the brain Topics: machine learning, brain connectivity, diffusion MRI, Magnetoencephalography (MEG), longitudinal studies and human cognition Description: Neuroimaging methods, like sMRI, dMRI, fMRI and MEG/EEG can be used to investigate the anatomical and functional connectivity of the brain. This project will enable the candidate to pursue research on machine learning methods for such neuroimaging data for brain connectivity, with applications to longitudinal studies and to human cognition. The ideal candidate should have a mixed background both in cognitive neuroscience and numerate disciplines, like computer science, engineering, physics or mathematics. This project is in collaboration with the Division of Neurosurgery, S. Chiara Hospital, Trento and with the MEG Lab of CIMeC/LNiF, University of Trento. Please contact in advance: Emanuele Olivetti, olivetti(a)fbk.eu Deadline: May 21, 2019 Online application details below. Corresponding research area in the online application: NEUROIMAGING METHODS AND ANALYSIS Topic-Specific Grant: "4. Machine learning for studying structural and functional connectivity of the brain." ---------------------------------------------------------- From: PhD CIMeC <phd.cimec(a)unitn.it> Subject: [CIMeC-FYI] Call for 17 funded PhD positions NOW OPEN @ CIMeC, UNITrento. Italy Dear CIMeC Supporters, We are pleased to announce the opening of our annual call for *17 PhD fellowships* for the international Doctorate in Cognitive and Brain Sciences (CIMeC), commencing November 2019 at the University of Trento, Italy. As you will see from the links below, the call is open to several fields of cognitive neuroscience research. Interested candidates should contact the Principle Investigators who proposed topics of interest to them. - *Admissions*: http://www.unitn.it/drcimec/admission - Proposed 2019 PhD research topics: http://www.unitn.it/drcimec/research-topics - PhD Application *summary*: *https://www.unitn.it/drcimec/116/admission-doctorate-cognitive-and-brain-sciences <https://www.unitn.it/drcimec/116/admission-doctorate-cognitive-and-brain-sc…>* - PhD *Application *link: https://webapps.unitn.it/Apply/en/MyUnitn/Home/669/dott/cbs35 - PhD Application *Deadline*:* Thursday May 21, 2019, at 4pm (Italian time)* - *CIMeC*: http://www.unitn.it/cimec This year’s research topics proposed by the Doctoral Program Committee for 5 UNITN grants are visible here: http://www.unitn.it/drcimec/research-topics, while the 12 topic-specific grants’ details can be found here: http://www.unitn.it/drcimec/topic-specific-grants *The CIMeC, it’s doctoral program and UNITN in numbers:* - UNITrento ranks among top Italian Universities https://www.unitn.it/en/ateneo/1636/rankings - *4-yr program* (Nov. 1, 2019- Oct. 31, 2023). - Why a 4-yr program <http://www.unitn.it/drcimec/node/117> - Courses are in English - 17 positions, 100% funded - Salary: starting at approximately €1.200/mo., net - Winners receive a €4887 tax-free research/mobility budget - Why choose UNITRENTO <http://www.unitn.it/en/ateneo/1629/why-choose-the-university-of-trento> Please feel free to browse the FAQ <http://www.unitn.it/drcimec/node/122> pages on our website for further information, or contact the Head of the Programme, Prof. Yuri Bozzi phd.cimec(a)unitn.it. Regards, Leah Mercanti -- Leah Mercanti CIMeC PhD Program Administrator -------------------------------------------------------- CIMeC - Center for Mind/Brain Sciences University of Trento Corso Bettini, 31 I-38068, Rovereto (TN) Tel: +39 0464 80 8617 Fax: +39 0461 28 8690 Skypename: lleahhatwork Email: phd.cimec(a)unitn.it http://www.unitn.it/drcimec/ -- -- Le informazioni contenute nella presente comunicazione sono di natura privata e come tali sono da considerarsi riservate ed indirizzate esclusivamente ai destinatari indicati e per le finalità strettamente legate al relativo contenuto. Se avete ricevuto questo messaggio per errore, vi preghiamo di eliminarlo e di inviare una comunicazione all’indirizzo e-mail del mittente. -- The information transmitted is intended only for the person or entity to which it is addressed and may contain confidential and/or privileged material. If you received this in error, please contact the sender and delete the material.

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Call for SIG and WG meetings in Warsaw, before INCF's Neuroinformatics 2019. Deadline June 1.
by Malin Sandström 30 Apr '19

30 Apr '19

Dear all, INCF is calling for community proposals for Special Interest Group (SIG) and Working Group (WG) meetings to be held in Warsaw on 31 August 2019, the day before the INCF Assembly. The call is open both to new and existing INCF SIGs/WGs. *Deadline is June 1st.* INCF is working to make neuroscience more FAIR (Findable, Accessible, interoperable, Reusable), by promoting the creation and uptake of standards and best practices in neuroscience, as applied to tools and infrastructure, and by running a community endorsement process for new and existing standards and best practices. SIGs have an important role in this process, as community-initiated groups where users and developers can meet to align interests, set up working groups and work collaboratively to develop, refine, and implement new community standards and best practices to be proposed for endorsement. The SIGs also serve as the focus for getting agreement and community buy-in on the use of these standards and best practices. SIG meetings in Warsaw should aim to: - investigate the possibility to establish new SIGs (possible activities include: survey for possible members and group activities, draft a plan of activities from community input) - update community members on SIG activities and progress since last year (existing SIGs), invite community input - form Working Groups (possible activities include: general meeting, set deliverables (develop new or extend existing standards and best practices), work on an application for INCF Working Group funding WG meetings in Warsaw should aim to: - update community members on SIG activities and progress since last year (existing WGs), - invite community input, - solicit new members INCF will support both SIGs and Working Groups with meeting logistics at INCF-associated meetings during the upcoming year, as well as offer funding for Working Group activities. Please submit your proposals for SIG and WG meeting themes no later than *June 1st*. Note that the submitter is assumed to also be the meeting leader, unless otherwise stated. Any questions can be directed to Malin Sandström, malin(a)incf.org Call page: https://www.incf.org/activities/standards-and-best-practices/incf-special-i… INCF SIG pages: https://www.incf.org/activities/standards-and-best-practices/incf-special-i… Best regards, Malin -- Malin Sandström, PhD Community Engagement Officer malin.sandstrom(a)incf.org International Neuroinformatics Coordinating Facility Karolinska Institutet Nobels väg 15 A SE-171 77 Stockholm Sweden http://www.incf.org

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Web Site Moved
by Jim Perlewitz 30 Apr '19

30 Apr '19

”Computational Neuroscience on the Web” has moved. Please update bookmarks / links. It can now be found here: https://compneuroweb.com <https://compneuroweb.com/> For 20 years, the site has been providing links to CNS researchers, modeling and analysis software, web accessible data and models, mailing lists, conferences, workshops, courses and more, Do give it a look. Please send suggestions. Best regards, Jim

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Registration open for the UK Neural Computation 2019 meeting
by Mark Humphries 29 Apr '19

29 Apr '19

We are delighted to announce that registration is open for the UK Neural Computation 2019 meeting! The main meeting will be 2nd-3rd July 2019, at the University of Nottingham. Invited speakers: Athena Akrami / Andy Barron / Tim Behrens / Claudia Clopath / Matthias Hennig / Simon Laughlin / Rosalyn Moran / Cian O'Donnell / Chris Summerfield / Tim Vogels / Barbara Webb Please register here: https://drmdhumphries.wixsite.com/ukneuralcomp2019/registration Deadline: June 21st 2019 We are offering a limited number of registrations (25) for early-career researcher workshops preceding the meeting, on Monday July 1st. Please see the Programme for full details at https://drmdhumphries.wixsite.com/ukneuralcomp2019 Abstract submission is still open here: https://drmdhumphries.wixsite.com/ukneuralcomp2019/abstracts Abstract submission closes: May 10th Decisions: May 24th Kind regards Mark Humphries (Chair) Hannes Saal, Robert Schmidt, and Stuart Wilson (Organising committee) This message and any attachment are intended solely for the addressee and may contain confidential information. If you have received this message in error, please contact the sender and delete the email and attachment. Any views or opinions expressed by the author of this email do not necessarily reflect the views of the University of Nottingham. Email communications with the University of Nottingham may be monitored where permitted by law.

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Workshop in Copenhagen, May 23rd-25th 2019
by Henrik Anders Lindén 28 Apr '19

28 Apr '19

Dear colleagues, We are organising a somewhat unusual workshop this coming May where we still have some seats left. The purpose of the workshop is to gather leading neuroscientists to discuss how a fundamental brain theory could be formulated. Each participating speaker has been given as homework to prepare a talk describing their view on such a theory, and to speculate on aspects where they don’t yet have the answers. The workshop will be a “real” workshop the sense that the invited speakers will work together on formulating a theory, and spend most of the time on discussions. The workshop is the second in a series, where the outcome of the first workshop (held in September 2016) was published in a Neuron issue published in June 2017: https://www.cell.com/neuron/issue?pii=S0896-6273(16)X0012-8 The confirmed speakers are: - Adrienne Fairhall, Univ. Washington, Seattle, USA - Alexa Riehle, CNRS, Marseille, France - Bing Brunton, Univ. Washington, Seattle, USA - Gyorgy Buzsaki, NYU, New York, USA - Haime Hirase, RIKEN, Wako,Japan - Jack Cowan, Univ. Chicago, Chicago, USA - Peter Dayan, MPI, Tübingen, Germany - Richard Morris, Univ. Edinburgh, Edinburgh, UK - Sara Solla, Northwestern Univ., Chicago, USA - Sophie Denève, ENS, Paris, France - Terry Sejnowski, Salk Institute, San Diego, USA - Wulfram Gerstner, EPFL, Lausanne, Switzerland - Yiota Poirazi, IMBB-FORTH, Heraklion-Crete, Greece - Zhaoping Li, MPI, Tübingen, Germany. Time: May 23rd-25th 2019, between 9-17 each day Place: The Carlsberg Academy, Copenhagen, Denmark. Information about the venue can be found here: https://www.carlsbergfondet.dk/en/About-the-Foundation/The-Carlsberg-Founda…<https://www.carlsbergfondet.dk/en/About-the-Foundation/The-Carlsberg-Founda…'s-home/The-Carlsberg-Academy> Registration: Attendance is free of charge but registration is required. (Note also that to be able to keep the registration free of charge no meals are included during the workshop.) Please register here: https://in.ku.dk/forms/how_brains_work/ See also the workshop homepage: https://in.ku.dk/seminars-and-events/workshop-developing-a-theory-on-how-br… Workshop steering board: Sophie Denève, John Hertz, Richard Morris, Maiken Nedergaard, Henrik Lindén and Per Roland On behalf of the steering board of the Copenhagen Initiative, Henrik Lindén and Per Roland (University of Copenhagen, Denmark) -- Henrik Lindén, PhD Assistant professor (adjunkt), University of Copenhagen Department of Neuroscience Blegdamsvej 3 DK-2200 Copenhagen N email: hlinden(a)sund.ku.dk<mailto:hlinden@sund.ku.dk> web: http://lindenh.wordpress.com

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Staff scientist position in the Section on Neurobiology of Fear and Anxiety, NIMH/NIH
by Ryan Philips 27 Apr '19

27 Apr '19

The National Institute of Mental Health (NIMH), a major research component of the National Institutes of Health (NIH), and the Department of Health and Human Services (DHHS), is seeking exceptional candidates for a Staff Scientist position in the Intramural Research Program (IRP), Section on Neurobiology of Fear & Anxiety. This section examines neural systems models of emotion/cognition interactions. This is done in two ways: one that focuses on anxiety in health and disease, and the other that uses a developmental perspective using large datasets. Four types of data are exploited, clinical/behavioral assessment, psychophysiology, fMRI (particularly 7T high-resolution scanner) and MEG. The candidate must have a doctoral degree (PhD) in computational neuroscience, or computer science/engineering and at least 5 years of experience post Ph.D. analyzing large datasets, modeling complex neural systems, using advanced machine learning algorithms. Experience with technical computing in MATLAB, R, C++ and a strong mathematical skill set is required. Knowledge of multi threaded and paralell computing environments is desirable. An interest in neuroscience or prior experience in neuroscience related fields is a plus. The staff scientist is expected to be a key member of the Section on Neurobiology of Fear and Anxiety, contributing to analytical methodology, design of new projects. Salary will be commensurate with education and experience. Applicants should send curriculum vitae and two letters of recommendation to Monique Ernst, MD, PhD, 301-675-4525, ernstm(a)mail.nih.gov. Applications will be accepted beginning April 1st. The position will be open until filled. HHS and NIH are Equal Opportunity Employers. Applications from women, minorities and persons with disabilities are strongly encouraged.

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PhD position in computational neuroscience at IIT - deadline May 15th
by Stefano Panzeri 27 Apr '19

27 Apr '19

*Fully funded PhD Position at IIT - Computational approaches to study the neural code* I am are seeking candidates for a fully funded PhD position at the Italian Institute of Technology’s in the lab directed by Stefano Panzeri ( https://www.iit.it/people/stefano-panzeri ). IIT collaborates with University of Bologna and finances the positions at the PhD course in Data Science and Computation. Although formally enrolled at the University of Bologna, the successful candidate will have the opportunity to conduct research either at the IIT center in Rovereto (Italy), or at the IIT headquarters in Genova, (Italy). The PhD project can focus on any of the research topics about neural information processing that are of interest to both the candidate and my lab, including: developing mathematical analysis methods and neural network models for studying large scale neural population coding during cognitive tasks, for studying the neural bases of sensory perception and decision making, for linking functional to anatomical connectivity with cellular resolution at the neural population level, and for determining the best theoretical framework to combine recording of neural activity (calcium imaging, electrophysiology, EEG) and intervention on it (optogenetics, TMS). My computational neuroscience lab has developed long-term collaboration with many experimental laboratories including Christopher Harvey and Wei Lee (Harvard Medical School), Nikos Logothetis (Tuebingen), Tommaso Fellin (IIT), Mathew Diamond and Davide Zoccolan (SISSA), Alex Thiele (Newcastle), Cristina Becchio (IIT) and others. The PhD project will likely involve collaborations with one or more experimental lab. For recent representative publications please see: van Vugt B, et al, (2018) Science: in press. DOI: 10.1126/science.aar7186 Zaldivar, D., et al, (2018) Current Biology 28: 224-235 Runyan C. A., et al (2017) Nature: 548: 92-96 Panzeri, S, et al (2017) Neuron 93: 491-507 Safaai, H. et al (2015) Proc. Natl. Acad. Sci. USA 112(41): 12834–12839 Fasoli, D. et al (2016) PLoS Computational Biology, 12(8): e1004992. Panzeri, S., et al (2015) Trends in Cognitive Sciences 19: 162-172 Einevoll, G., et al (2013) Nature Reviews Neuroscience, 14, 770-785 The ideal candidate should have a strong background in numerate sciences, and have a strong propensity for interdisciplinary research. No extensive previous experience in neuroscience is needed. However, a keen interest in understanding the brain is essential. The deadline for the formal application is set to *May 15thst 2019*, but interested candidates are invited me to contact me informally by email ( stefano.panzeri(a)iit.it) *as soon as possible,* and no later than May 8th 2019, by attaching their CV and briefly explaining their interest in this position, to initiate discussion about potential PhD projects of interest. In order to formally apply to the PhD Position, candidates will then need to refer to the call published by Università degli Studi di Bologna ( https://www.unibo.it/en/teaching/phd/2019-2020/data-science-and-computation) The PhD position available for projects under my supervision is one of those financed by IIT. Candidates that are wishing to apply will be able to rely on my advice and feedback to understand how to complete the application. Yours truly, Stefano Panzeri

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postdocship on computational modeling of reading
by Meeter, M. 27 Apr '19

27 Apr '19

Postdoctoral fellowship: Computational modeling of reading Right now you are reading. It does not cost you much effort because it is a highly automated process, but you are simultaneously decoding letters, moving visual attention, programming eye movements, recognizing words, stringing them together in a coherent syntactic and semantic representation, and adducing the intentions of the writer. We understand these individual processes in reading, but not how our brain can perform them simultaneously at the phenomenal speed of about 200 ms per word. Recently, a group of researchers in Marseille and Amsterdam has collaborated on the ambitious goal to create one computational model that describes all processes involved in reading, from the single letter up to understanding a sentence. Within this collaboration, there is an opening for a two-year postdoctoral fellowship to work on computational modelling. The candidate will work on extending the already published OB-1 model (Psychological Review<https://research.vu.nl/en/publications/ob1-reader-a-model-of-word-recogniti…>, 2018). While the exact direction taken may depend on the interests of the candidate, this will include improving word recognition processes and accounting for EEG responses recorded during reading. Practicalities The postdoc will work in Amsterdam in the group of Martijn Meeter, but also be expected to regularly visit the Marseille group of Jonathan Grainger. The two-year position is potentially renewable for a third year. Official employer will be Université Aix-Marseille, including a one-year trial period. A postdoc salary in France is about €2606 a month; travel costs will be covered. Starting date is preferably 1 September 2019, but other dates can be discussed. Required skills are: * Experience with computational modelling * Good to excellent programming skills, notably in Python * An interest in language as field of research The positions are part of an ERC grant to Jonathan Grainger. More information can be requested at i.jonathan.grainger(a)gmail.com<mailto:i.jonathan.grainger@gmail.com> or m(a)meeter.nl<mailto:m@meeter.nl>. To apply, please send an email before 1 June with as title “Postdoc computational model”to m(a)meeter.nl<mailto:m@meeter.nl> , with as attachments: * a letter of application, * your resume * names of two references (will only be contacted with your permission), Best, Martijn Meeter ------------------------------- Prof. dr. M. Meeter Vrije Universiteit Amsterdam Dept. of Education Science http://www.meeter.nl/m<https://webmail.login.vu.nl/OWA/redir.aspx?SURL=l3I3NtaZYJte9nu-0v--nYrWbGa…> --------------------------------

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US Air Force Young Investigator Research Program (YIP)
by GREENWALD, HAL S DR-04 USAF AFMC AFOSR/RTA 27 Apr '19

27 Apr '19

The Air Force's annual Young Investigator Research Program (YIP) is an excellent way for new principal investigators in the US to accelerate their careers in basic research with three years of funding at up to $150,000 per year. Each year, every AFOSR portfolio can nominate one YIP awardee. Especially since the Cognitive & Computational Neuroscience portfolio is new this year, I wanted to make the neuroscience community aware of this opportunity (and also of the new portfolio). Unlike most of AFOSR's research grants that are open to researchers worldwide, YIP awards are limited to US persons (citizens, nationals, or permanent residents) with full-time, permanent positions at US institutions who received their doctorates no later than April 1, 2012. The application deadline for Fiscal Year 2020 awards is June 3, 2019. Program Description: The Air Force YIP supports scientists and engineers who have received Ph.D. or equivalent degrees within the last seven years and show exceptional ability and promise for conducting basic research. The objectives of this program are: 1. to foster creative basic research in science and engineering; 2. enhance early career development of outstanding young investigators; 3. and increase opportunities for the young investigator to recognize the Air Force mission and related challenges in science and engineering. Eligibility: Individual awards are made to U.S. institutions of higher education, industrial laboratories, or non-profit research organizations where the principal investigator (PI) is employed on a full-time basis and holds a regular position. YIP PIs must be a U.S. citizen, national, or permanent resident. Researchers working at a Federally Funded Research and Development Center or DoD Laboratory are not eligible for this competition. Research proposals must address Research Interests of the Air Force Office of Scientific Research, FA9550-19-S-0003, found at https://www.grants.gov/web/grants/view-opportunity.html?oppId=314753. Most YIP awards are funded up to $150,000 per year for three years, for a total of $450,000. Exceptional proposals will be considered individually for higher funding levels and/or longer duration. For more information about this funding opportunity, please see https://www.grants.gov/web/grants/view-opportunity.html?oppId=313523. Questions about YIP may be sent to afosryip(a)us.af.mil <mailto:afosryip@us.af.mil> . Sincerely, Hal Greenwald Hal S. Greenwald, Ph.D. Program Officer, Cognitive & Computational Neuroscience Air Force Office of Scientific Research (AFOSR/RTA) 875 N. Randolph St. Arlington, VA 22203-1768 (703) 588-8441

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Postdoctoral fellowships at the Neuromathematics Center in Sao Paulo State, Brazil
by Antonio Roque 24 Apr '19

24 Apr '19

Positions for Postdoctoral Researchers The Research, Innovation and Dissemination Center for Neuromathematics ( NeuroMat <https://neuromat.numec.prp.usp.br/>), hosted by the University of Sao Paulo, Brazil, and funded by the Sao Paulo Research Foundation (FAPESP <http://www.fapesp.br/en/>), is offering several postdoctoral fellowships for recent PhDs with outstanding research potential. The research will involve collaborations with experimental and theoretical groups and laboratories associated to NeuroMat. The research to be developed by the postdoc fellows shall be strictly related to ongoing research lines developed by the NeuroMat team. The project may be developed at USP Sao Paulo, USP Ribeirao Preto or Unicamp. We seek candidates capable to develop independent research in one of the research lines below. 1. Stochastic and/or computational modeling of the brain functioning. 2. Acquisition, processing and quantitative analysis of electrophysiological data. 3. Biomedical devices for neuroscience research. Candidates to the first research line are required to have at least one of the profiles below: · A strong background in probability theory with emphasis on stochastic processes. Previous knowledge of rigorous statistical mechanics or random graphs will be favorably considered. · A strong mathematical and/or computational background and experience with computers and programming. Previous experience with development and/or simulation of neural brain models, complex networks and parallel computing will be favorably considered. Candidates to the second research line are required to have at least one of the profiles below: · A strong background in neuroscience with previous experience in neurophysiological data acquisition, processing and analysis, and knowledge of computer programming. · A strong background in computer science with experience in the development of algorithms, software tools and data bases. Previous research experience in neuroscience or related areas will be favorably considered. Candidates to the third research line are required to have at least one of the profiles below: · A strong background in electromagnetism and biomedical engineering. Previous knowledge of transcranial magnetic stimulation or magnetic/electric field simulation will be favorably considered. · A strong background in computer science and control software development expertise. Previous experience with neuroscience and neuronavigation systems will be favorably considered. Previous experience with multidisciplinary research teams is welcome for all the above research lines. The initial appointment is for one year, with a possible extension to up to four years, conditional on research progress. The fellowship is competitive at international level, and fellows benefit from extra funds for travel and research expenses plus limited support for relocation expenses. Application Instructions Applicants should complete and submit the application form <https://neuromat.numec.prp.usp.br/postdoc/new>. The following documents and information are requested (please see the form for further details): · Summary of the CV, in the FAPESP format (see www.fapesp.br/en/6351 for instructions.) · List of publications, with links to those available online. · A summary of the research plan for the next year, up to 5 pages length. It should explicitly state for which of the three above profiles the candidate is applying. It should also address its place within the framework of the NeuroMat research program <https://neuromat.numec.prp.usp.br/scientific-project>. · Pointers to other research related output, such as software, web pages, and so forth. Candidates should be willing to send copies of publications, if requested. · Any further information deemed relevant to the application. In addition to the above, we require at least 2 recommendation letters. Those should be mailed by the recommenders directly to postdoc-appl(a)numec.prp.usp.br. Candidates are encouraged to apply at their earliest convenience until June 3rd, 2019. Appointments are expected to start by September 1st, 2019. The initial period of the position lasts for 12 months, with possible renovations for up to four years. This opportunity is open to candidates of any nationality. The selected candidates will be awarded FAPESP Post-Doctoral fellowships in the amount of BRL 7,372.40 monthly and a research contingency fund, equivalent to 15% of the annual value of the fellowship, which should be spent in items directly related to the research activity. More information about the fellowship is at: www.fapesp.br/en/5427. -- Dr. Antonio C. Roque Professor Associado Departamento de Fisica FFCLRP, Universidade de Sao Paulo 14040-901 Ribeirao Preto-SP Brazil - Brasil E-mails: antonior(a)usp.br <antonior(a)ffclrp.usp.br> aroquesilva(a)gmail.com URL: www.sisne.org Tels: +55 16 3315-3768 <+55%2016%203315-3768> (sala/office); +55 16 3315-3859 <+55%2016%203315-3859> (lab) FAX: +55 16 3315-4887 <+55%2016%203315-4887>

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Post-doc @ Univ of Toronto: bioinformatics, neuron modeling, and machine learning
by Shreejoy Tripathy 24 Apr '19

24 Apr '19

Post-doctoral fellowship in multi-scale bioinformatics and neuroscience – Tripathy laboratory, CAMH, University of Toronto Job Description: We are looking for a post-doctoral fellow with a background in bioinformatics, computational biology, or neuroinformatics. The position is in the Laboratory for Computational Genomics, under the supervision of Dr. Shreejoy Tripathy (https://triplab.org/) . The post-doc will contribute to a growing team at the new Krembil Centre for Neuroinformatics, based at CAMH and the University of Toronto. Project Description: The candidate will lead a multi-disciplinary dry-lab project in multi-omics and cellular neuroscience. The project’s goal is to identify cross-modal relationships between: 1) human genotypes; 2) tissue- and cell type-specific gene expression; and 3) neuronal and circuit phenotypes, including electrophysiology, morphology, and synaptic physiology. The candidate will develop and apply machine learning and statistical methods to translate information across these data types. The project will make use of publicly-accessible datasets (e.g., PGC, PsychEncode, Allen Institute) as well as private datasets provided by collaborators. The post-doc will interface with a team of experimentalists and computational modelers to directly test their predictions and work with clinician-scientists to use these approaches for patient stratification. The ideal candidate is someone who is passionate about using basic research in genomics and neuroscience to improve the understanding and treatment of psychiatric disorders. Position details: The position is for a duration of up to 3 years, renewed yearly. Compensation, including benefits, is competitive and will be based on experience and established pay-scales. The candidate will support a healthy workplace that embraces diversity, encourages teamwork, and complies with all applicable and regulatory requirements. Qualifications: A recent PhD in bioinformatics, neuroscience, or statistics (or equivalent computational discipline) Considerable experience programming, scripting, and analyzing data in a high-level language (e.g., R, Python, or MATLAB) Experience analyzing and quality-controlling multi-omics datasets, including genotyping, transcriptomics, and cellular characteristics A track record for independent research that demonstrates creativity Excellent communication skills and experience working in a collaborative and multi-disciplinary environment How to apply: A complete application should include a brief cover letter, a curriculum vitae, and the contact information for 2-3 references. Submit applications to Shreejoy Tripathy (shreejoy.tripathy(a)utoronto.ca) with the title: “Post-doc in multi-scale bioinformatics and neuroscience” in the subject line. In the cover letter, please highlight one or two publications or preprints the candidate feels is their best work. Applications will be reviewed in an ongoing manner and the position will remain open until filled. About the Krembil Centre for Neuroinformatics: In 2017, Centre for Addiction and Mental Health (CAMH) established its new $15-million Krembil Centre for Neuroinformatics to leverage the largest mental health patient database in Canada and combine world-leading talent specializing in computational approaches to brain science, a robust data integration platform, and analytical tools to accelerate and revolutionize the world’s understanding of the brain and brain-based illnesses. The Krembil Centre for Neuroinformatics positions CAMH as a leader in brain science using the power of big data analytics, artificial intelligence and machine learning, and multi-scale brain modelling in order to bridge the levels of the structure and function of the brain – from genes to circuits to behavior.

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Tenure Track Faculty Position - Systems and Computational Biology
by Ruben Coen-Cagli 24 Apr '19

24 Apr '19

Dear colleagues, our department is recruiting faculty with an emphasis on theoretical, computational and experimental approaches to studying complex biological systems, including computational neuroscience. Details in the ad below. The Albert Einstein College of Medicine, one of the leading medical schools, located in New York City, is seeking to fill multiple tenure track faculty positions in the Department of Systems and Computational Biology. The major goal of the department is to advance our understanding of living systems by developing theoretical, computational and experimental approaches to study complex biological systems. The College has 711 medical students, 160 Ph.D. students and 107 M.D./Ph.D. students, 265 postdoctoral research fellows in training and boasts a strong research faculty covering broad areas of experimental biology. The College of Medicine has more than 1,800 full-time faculty members located on the main campus and at its clinical affiliates. The 200,000 square foot Center for Genetic and Translational Medicine at Einstein locates computational, systems and experimental scientists in physical proximity to foster interdisciplinary communication and collaboration. Highly competitive start-up packages are available. [https://analytics.click2apply.net/v/Y7MBopTB6AyKtRmRu8Xgz] We seek outstanding scientists with broad experience and demonstrated collaborative interactions with experimental or clinical investigators. Candidates should have strength in a physical, mathematical or computational field at the Ph.D. or equivalent level. Experience applying these skills to a biological or biomedical area (demonstrated through publications or support) is also desirable. Areas of interest include, but are not limited to: Modeling cellular processes; Evolutionary medicine; Evolution of structure and function; Biological networks analysis; Microbiome; Computational neuroscience; Mathematical and computational modeling of high-dimensional data related to complex traits. Applicants should send a letter of interest, C.V., statement of research and teaching interests, and names of three referees, in electronic format to: Systems and Computational Biology Search Committee Albert Einstein College of Medicine Jack and Pearl Resnick Campus 1300 Morris Park Ave. Price Center, Rm. 153 Bronx, New York 10461 E-mail Address: SysBio(a)einstein.yu.edu<mailto:SysBio@einstein.yu.edu> Subject line should be: SCB Faculty Search The Albert Einstein College of Medicine is an Equal Opportunity/Affirmative Action Employer. All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, age, protected veteran or disabled status, or genetic information. Ruben Coen Cagli, PhD Department of Systems and Computational Biology, and Dominick Purpura Department of Neuroscience Albert Einstein College of Medicine 1300 Morris Park Ave. Price 353B Bronx, 10461. NY office: +1.718.678.1150 web: https://sites.google.com/site/rubencoencagli/

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postdoctoral positions in computational neuroscience at IIT, Italy
by Stefano Panzeri 24 Apr '19

24 Apr '19

Two postdoctoral positions will be available at Istituto Italiano di Tecnologia) to work with me (Stefano Panzeri https://www.iit.it/people/stefano-panzeri) in the laboratory of Neural Computation. The laboratory investigates, by developing and using advanced data analysis methods and neural network models, how circuits of neurons in the brain encode information and use it to produce appropriate behaviors. The positions on offer would leave the candidate the choice of developing a research project of mutual interest within this research area. The laboratory offers a wide range of interdisciplinary expertise in computational neuroscience, including both advanced neural analysis techniques and neural network modeling. The laboratory also offers a thriving, ambitious research environment which is well funded (including several grants from the NIH Brain Initiative). Moreover, the laboratory offers extensive long-term international collaborations with empirical neuroscience laboratories (including Chris Harvey at Harvard Medical School, Wei Lee at Children’s Hospital, Christoph Kayser at Bielefeld, Nikos Logothetis at Tuebingen, Mathew Diamond at SISSA, Tommaso Fellin and Cristina Becchio at the IIT, Alex Thiele at Newcastle) and ample opportunities for advanced training and personal scientific growth. I seek candidates holding a PhD in a numerate or neuroscientific discipline, with a solid computational background and a keen interest in neuroscience. They must be highly motivated and creative individuals who want to work in a dynamic, multi-disciplinary research environment and be willing to interact with both experimental and theoretical neuroscientists. The successful candidate will have the opportunity to conduct research at the IIT center in Rovereto (Italy), or at the IIT headquarters in Genova, (Italy). For representative recent publications from my lab, please see: Runyan C. A., et al (2017) Distinct timescales of population coding across cortex, Nature: 548: 92-96. Panzeri S., et al (2017) Cracking the neural code for sensory perception by combining statistics, intervention and behaviour. Neuron 93: 491-507 Safaai, H., et al (2015) Modelling the effect of Locus Coeruleous firing on single trial cortical state dynamics and sensory processing. Proc. Natl. Acad. Sci. USA 112(41): 12834–12839 Further information about my research can be found at my IIT and Google Scholar web pages: https://www.iit.it/people/stefano-panzeri https://scholar.google.it/citations?user=C-HCQ9cAAAAJ&hl=en Applications (full CV, statement of research interest and name and contact of 2 referees) should be sent by e-mail to stefano.panzeri(a)iit.it, quoting “Postdoctoral position in Computational Neuroscience” in the subject line. The deadline for applications is May 18th, 2019. Applications will be examined until the position is filled. Interested applicants are advised to contact me by email informally as soon as possible to discuss about the science and the position informally. Thanks Stefano Panzeri

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