- Comp-neuro - lists.cnsorg.org

Open position: PhD in signal processing / computational & clinical neuroscience
by Alan May 26, 2017

May 26, 2017

Dear all, Please find an open position for a PhD in signal processing / computational & clinical neuroscience *Project title: ** *NeuroCog – Parkinson action (https://neurocog.univ-grenoble-alpes.fr) Funding body: UGA Contract duration: 3 years Starting date: From September 2017 on. *Job description:* The successful candidate will develop new TMS/EEG methods (acquisition and processing) for early Parkinson’s disease diagnosis that will quantify the impairment of cortical excitability. *Requested expertise: ** *Computer science / Signal processing / Parkinson’s disease / Neuroimaging / Brain stimulation *Project scientific summary:* Parkinson's disease (PD) is the second most frequent neurodegenerative disorder. Unfortunately, there is no cure for PD and no neuroprotective treatment and about 95% of patients will become demented within 25 years after the diagnosis. The presentation and evolution of PD is highly heterogeneous between patients and some PD phenotypes are more at risk of having a more severe and progressive course of the disease. In particular, although cognitive deficits are very frequent in old patients, in younger patients it is difficult to predict whether they will develop early cognitive disturbances. For this PhD project, we assume that in PD patients with a subtype characterized by prevalent cognitive issues, the impairment of cortical excitability in the fronto-parietal networks would be a new biomarker detectable at an early disease stage. We will thus study the cortical excitability using innovative methodologies that will be first developed in healthy subjects (Harquel et al, 2016; in press) and then longitudinally tested in a cohort of de novo PD patients. Overall, this project investigates PD phenotypes under a neurophysiological perspective that is highly innovative. *Host research groups:* The main goal of the primary host research group (Brain Stimulation & Systems Neuroscience, PI: Olivier David) is to study large-scale brain networks in order to develop new applications of brain stimulation in the field of psychiatry, movement disorders and epilepsy using a translational approach based on clinical and preclinical research. The secondary host lab (Laboratory of Psychology and Neurocognition, PhD co-director: Dr A. Chauvin) is a Cognitive Science Research Unit affiliated to the CNRS (National Institute of Biological Sciences, section 26) and to two universities (University Grenoble-Alpes, Grenoble and University of Savoie Mont Blanc, Chambery). Members of the LPNC who compose the TMS group have an interdisciplinary approach which encompasses engineering, experimental psychology; computational and mathematical modelling; neuropsychology; cognitive psychiatry; and neuroimaging. In addition, the PhD fellow will be in constant interaction with the Movement Disorder Unit of CHUGA (PI: Pr E Moro) and other research groups within the NeuroCog project working on the same cohort of PD patients. Very close interactions between experimentalists, methodologists and clinicians, will offer an optimal environment to develop skills of young scientists. Contacts: Dr Olivier David, Research Director, Inserm, Olivier.David(a)inserm.fr. Dr Alan Chauvin, Assistant Professor, UGA, Alan.Chauvin(a)univ-grenoble-alpes.fr. *Please send application including CV, statement of research interests, and the names and full contact details of at least two referees.** * References: Harquel, S., Bacle, T., Beynel, L., Marendaz, C., Chauvin, A., & David, O. (2016). Mapping dynamical properties of cortical microcircuits using robotized TMS and EEG: Towards functional cytoarchitectonics. NeuroImage, 135, 115–124. Harquel, S., Diard, J., Raffin, E., Passera, B., DallIgna, G., Marendaz, C., et al. (In press). Automatized set-up procedure for transcranial magnetic stimulation protocols. NeuroImage -- New E-mail : Alan.Chauvin(a)univ-grenoble-alpes.fr -- Laboratoire de Psychologie et NeuroCognition LPNC CNRS UMR 5105 Université Grenoble Alpes(UGA) Batiment Science de l'Homme et Math (BSHM) 38041 Grenoble Cedex 09 Alan.Chauvin(a)univ-grenoble-alpes.fr 33 (0) 476 825 926

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Two Research Associate/Assistant Positions in Interpersonal Neural Connectivity at Cambridge University
by Dr V Leong May 25, 2017

May 25, 2017

--- TWO RESEARCH ASSOCIATE/ASSISTANT POSITIONS IN INTERPERSONAL NEURAL CONNECTIVITY AVAILABLE --- The Baby-LINC Lab at Cambridge University is seeking two highly-skilled and motivated post-doctoral researchers to join our multidisciplinary data analysis team! We have recently completed an ESRC-funded large-scale EEG hyperscanning study on mother-infant neural coupling in relation to early learning. We are interested in understanding the interpersonal neural oscillatory dynamics that underpin different mother-infant social interactional states (such as joint attention versus inattention). We are also interested in characterizing the topology of coupled neural networks during successful learning and information transfer within mother-infant dyads. Candidates should be able to demonstrate strong technical expertise in one or more of the following areas : 1) Neural connectivity analysis 2) Signal processing (artifact identification and denoising) 3) Information theoretic analysis 4) Machine learning (including Bayesian learning) Applicants should have already obtained (or be about to complete) a PhD in a relevant subject, which may include (but is not limited to) the fields of computational neuroscience, cognitive neuroscience, biomedical physics, and engineering. Excellent programming skills are essential as the post-holder(s) will be expected to contribute to the lab’s in-house library of custom-built analysis scripts. Experience with EEG/MEG analysis is desirable. Excellent organisational and communication skills are essential, as the candidate must work well as part of a larger research team which includes international collaborators. This is an exciting opportunity to join pioneering research in the field of interpersonal neuroscience, at a time when there is growing interest and momentum. Two posts are available. One post, appointed through the University of Cambridge, is available at the level of Research Associate (post-doctoral) or Research Assistant (PhD to be awarded), on a 50% part-time basis. A second full-time (100%) post is available at the level of Research Associate only. This second post will be appointed through Nanyang Technological University (Singapore), but the post-holder will be entirely based in Cambridge. All suitable applicants will automatically be considered for both posts, unless the candidate indicates otherwise. We would like both successful candidates to begin as soon as possible, and no later than 1st August 2017, but flexible working arrangements can be considered. Informal enquiries are welcome, and can be made to Dr Victoria Leong by email (vvec2(a)cam.ac.uk) or telephone (+ 44 1223 333567). For further information, and to apply : http://www.jobs.cam.ac.uk/job/13871/ -- Victoria Leong, PhD Assistant Professor of Psychology Nanyang Technological University (Singapore) Affiliated Lecturer Department of Psychology, University of Cambridge (UK)

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Postdoc in Connectomics at UPenn
by Ragini Verma May 24, 2017

May 24, 2017

Postdoctoral positions in diffusion imaging are available immediately at the Section of Biomedical Image Analysis (SBIA), Department of Radiology, University of Pennsylvania, Philadelphia, PA, USA. Candidates must have a background in Electrical or Biomedical Engineering, Computer Science, Applied Math or MR Physics, with experience in diffusion imaging. Knowledge of maine learning techniques is a plus. Current projects involve work on connectomics, multi-compartment models, edema-invariant tractography and joint structural-functional connectivity analysis and their application to brain tumors, traumatic brain injury and autism. Good programming skills is a must. All projects have a strong emphasis on method development (for technical publications) but require subsequent clinical application of the same. The positions call for interaction with clinical collaborators. Please contact the head of the diffusion group, Ragini Verma (Associate Professor of Radiology) at Ragini.Verma(a)gmail.com and Ragini.Verma(a)uphs.upenn.edu <https://mail.uphs.upenn.edu/owa/redir.aspx?SURL=y44JoDKtWxPkUtTXoC_Nf05OEJx…> .

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2017 Cell Modeling Workshop
by Greg Hood May 24, 2017

May 24, 2017

Dear Colleague, We would like to make you aware of the following workshop to be held at the Pittsburgh Supercomputing Center: CELL MODELING WORKSHOP Workshop Dates: June 26 - 28, 2017 Application Deadline: June 2, 2017 For more details, or to apply visit: http://mmbios.org/cmw2017 This workshop will cover theory and practice for the design and simulation of cell models focused on diffusion-reaction systems such as neurotransmission, signaling cascades, and other forms of biochemical networks. During the workshop, participants will learn how to use the tools developed by MMBioS to create, run, and analyze models of cellular microphysiology and apply them to their own research questions. This workshop lasts three full days, and attendees are strongly encouraged to bring ideas/data for their own simulation projects. The daily schedule includes theoretical and practical lectures, instructor-guided hands-on tutorials, and opportunities for one-on-one interaction with the instructors on individual project development.

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PhD Position in Computational Neuroscience of perceptual decision-making at UPF (Barcelona)
by Alexandre Hyafil May 24, 2017

May 24, 2017

One fully funded PhD position is available under the supervision of Alexandre Hyafil in the group of Theoretical and Cognitive Neuroscience of Rubén Moreno Bote. The group is part of the *Center for Brain and Cognition* at the University Pompeu Fabra (UPF), Barcelona, Spain ( https://www.upf.edu/web/ruben-moreno-bote) The candidate will study theoretical models of perception in complex environments and design and analysis human experiments to directly test these models. He/she could also be involved in the design and analysis of animal behavioral and multielectrode neural data. Candidates should have *Physics*, *Mathematics* or *Machine Learning* background, ideally with knowledge of *Neuroscience* or *Computational Neuroscience*, and interested in theory and applications. We will also consider candidates with *Psychology* background interested in computational modeling. The candidate will benefit from the stimulating environment of Barcelona area in Theoretical and Systems Neuroscience. Our lab forms part of a larger network of neuroscience labs in Barcelona (http://www. barcelonaneuroscience.com) Candidates, please send a full CV and an extract of grades for degree and master studies should be sent to alexandre.hyafil(a)upf.edu. Deadline: until the position is filled. Starting date: any time between October 2017 and January 2018.

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Post-doctoral Position in Computational Neuroscience
by sujith vijayan May 22, 2017

May 22, 2017

The Neural Dynamics and Neural Engineering Lab at Virginia Tech has an opening for a post-doctoral position in computational neuroscience. This position is for three years and is being funded by the Army Research Office (ARO). The research project will involve employing biophysically based computational models to examine the role of rhythmic activity in the expression of emotional memories during behavior and their consolidation during sleep. An additional aim is to employ the models developed to gain insights into the pathophysiology of post-traumatic stress disorder (PTSD). Candidates should have a Ph.D. in applied mathematics, computer science, engineering, computational neuroscience, or a related field. Strong programming skills and/or prior experience in modeling would be an asset. Interested candidates should send a CV, a statement of research interests, and the contact information for three references to svijayan9(a)gmail.com. Arrangements can be made to meet with candidates at the Sleep conference in Boston (June 3-7) or at the Society for Industrial and Applied Mathematics (SIAM) conference in Pittsburgh (July 10-14). Best, Sujith

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Postdoctoral Position in Primate Circuits/Systems Neuroscience, Hoffman Lab
by Hoffman, Kari May 19, 2017

May 19, 2017

Postdoctoral Research Position in Neural Circuits of Learning and Memory in Non-human Primates Vanderbilt University, Dr. Kari Hoffman The Perception and Plasticity lab (PI: Kari Hoffman) at Vanderbilt University is recruiting a postdoctoral researcher to investigate the neural circuit dynamics underlying memory formation and flexible learning in macaques. Approaches include 1) multi-site electrode array recordings and closed-loop stimulation during visual exploration and 2) high-density wireless recordings during freely-moving tasks and in sleep to identify neural correlates of learning. See http://wp.me/P5TndN-m. Successful candidates will have a PhD in a relevant field (e.g., Neuroscience, Computer Science, Biomedical Engineering, Psychology) and be able to work both independently and as part of a team. Applicants should have experience with macaque behavior or neural ensemble analysis, proficiency in programming/scripting and statistical modeling, and a record of published work related to the areas of interest. The candidate will join a vibrant research community of systems and integrative neuroscience and vision science at Vanderbilt University, including the Vanderbilt Brain Institute and the Vanderbilt Vision Research Center. Vanderbilt University is an Equal Opportunity/Affirmative Action Employer. The start date is flexible. Funding is available for at least three years. The initial appointment will be for one year, with the opportunity for renewal. Applicants should email kari.hoffman(a)vanderbilt.edu<mailto:kari.hoffman@vanderbilt.edu> with a research statement summarizing area of interest, previous accomplishments, and long-term research goals; a CV; and contact information for three references.

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BBP- Postdoctoral Position in Neuro-Glia-Vasculature Modeling
by Daniel Keller May 19, 2017

May 19, 2017

BBP- Postdoctoral Position in Neuro-Glia-Vasculature Modeling A postdoctoral position in modeling of neuro-glia-vasculature is available at the Blue Brain Project at the Swiss Federal Institute of Technology in Lausanne (EPFL), Switzerland (www.epfl.ch) The Blue Brain Project, based in Geneva, Switzerland, performs large-scale simulations of the brain. The neuro-glia-vasculature project will extend the model of astrocytes and vasculature to include better prediction of blood flow and energy usage.The position entails development of methods and systems to perform multi-scale modeling and integrate knowledge of the signaling pathways involved in glial messaging. The ideal candidate will have a Ph.D. in computational neuroscience or related field. Experience in modeling of metabolism, blood flow, and/or biochemical signaling cascades is desired. Strong biology and mathematical background, as well as coding competence in Python, C++, and NEURON would also be useful for the position. We are looking for highly motivated individuals to be part of a highly multidisciplinary group working at the interface of neuroscience, physics and computer science. Candidates should possess good writing, collaboration, and communication skills. Selected candidates will join a prestigious project that is pioneering simulation neuroscience research, composed of a young, dynamic, interdisciplinary, and international team. We offer a state-of-the-art working environment based at the Biotech Campus in Geneva ( http://www.campusbiotech.ch/en/ ) with access to cutting edge simulation, informatics and computing facilities. Post-doctoral contracts are generally for one year, renewable for up to two years.Salaries are quite competitive as well, even after taking into account differences in the cost of living. Interested applicants should submit a cover letter and a detailed CV in PDF format only, with file name “Surname_position _Cover Letter” and “Surname_positon _CV” electronically to jobs.bbp(a)epfl.ch Please use the reference of the position title in the “object” field.

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PhD position in computational cognitive neuroscience at University of Groningen
by Marieke van Vugt RUG May 18, 2017

May 18, 2017

Dear colleagues, We have a new PhD position in computational cognitive neuroscience as part of a larger COFUND grant to the Data Science and Systems Complexity centre of the University of Groningen. You will work in an interdisciplinary team of scientists from Cognitive Modeling and Control Engineering (including myself and Prof. Ming Cao), on a project that you will be able to help design. The link to the 18 projects (including the computational cognitive neuroscience project in collaboration with Cardiff University) is http://www.rug.nl/research/fse/themes/dssc/cofund/training/ <http://www.rug.nl/research/fse/themes/dssc/cofund/training/> The DSSC Research Training Programme is a Marie Sklodowska-Curie COFUND action developed at the University of Groningen that will train 10 PhD students for 4 years to be part of the next generation of interdisciplinary data and complexity experts. Brief description of the COFUND project: Today’s world is a highly complex system that is producing massive amounts of data daily. We can only progress towards urgent global priorities such as sustainable energy, personalized healthcare, safety or the creation of the data- driven economy if we can predict and control the dynamic nature of such systems. This challenge calls for an integrated approach that uses data to understand the behaviour of complex systems and for experts who can handle data and complexity problems for society at large. For more details, DSSC COFUND website is www.rug.nl/dssc-cofund <http://www.rug.nl/dssc-cofund>. Applications should be submitted online <http://www.rug.nl/about-us/work-with-us/job-opportunities/overview?details=…> by July 15th. The PhD could start anywhere between October 2017 and March 2018. Kind regards, Marieke van Vugt -------------------------------------------------------------------- Marieke van Vugt, PhD Assistant Professor, Cognitive Modelling Group University of Groningen Bernoulliborg, room 326 Nijenborgh 9 9747 AG Groningen The Netherlands phone: +31-6-5195-4984 (cell) +31-50-363-9487 (office) http://www.ai.rug.nl/~mkvanvugt <http://www.ai.rug.nl/~mkvanvugt> twitter: @mvugt m.k.van.vugt(a)rug.nl <mailto:m.k.van.vugt@rug.nl> / mkvanvugt(a)gmail.com

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SCiNDU conference call for abstracts
by Geoffrey Goodhill May 18, 2017

May 18, 2017

SYSTEMS AND COMPUTATIONAL NEUROSCIENCE DOWNUNDER (SCiNDU) Joint meeting with the 2017 QBI Plasticity Workshop and the 10th Australasian Workshop on Neuro-Engineering and Computational Neuroscience Dec 13-15th 2017 Queensland Brain Institute, University of Queensland, Brisbane, Australia http://www.qbi.uq.edu.au/scindu Confirmed speakers: Polina Anikeeva (MIT) Bernard Balleine (UNSW) Daphne Bavelier (U Geneva) John Bekkers (ANU) Kwabena Boahen (Stanford) Tobias Bonhoeffer (Max Planck Martinsried) Rosa Cossart (INMED Marseille) Kenji Doya (Okinawa) Adrienne Fairhall (U Washington) Marta Garrido (U Queensland) Alex Pouget (U Geneva) Pankaj Sah (U Queensland) Andre van Schaik (Western Sydney) Rafael Yuste (Columbia) Abstract submissions for poster presentation are welcome, deadline Oct 1st. Some submissions will be selected for oral presentation. See http://www.qbi.uq.edu.au/scindu for more details. Professor Geoffrey J Goodhill Queensland Brain Institute and School of Mathematics & Physics University of Queensland St Lucia, QLD 4072, Australia Email: g.goodhill(a)uq.edu.au http://www.qbi.uq.edu.au/professor-geoffrey-goodhill

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