March 2024 - Comp-neuro - lists.cnsorg.org

Last few days to apply to the Eresfjord School "Mathematical Methods in Computational Neuroscience"
by Ines Samengo 27 Mar '24

27 Mar '24

If you are a master, a PhD student, or a postdoc working in computational neuroscience, you may want to consider applying to the Eresfjord summer school "Mathematical Methods in Computational Neuroscience" taking place in Eresfjord, Norway, between the 8th and the 16th July 2024. The deadline is next Sunday 31st March. More information in https://www.compneuronrsn.org/

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Postdoc/Master position ML
by Sivan Kinreich 26 Mar '24

26 Mar '24

Please forward this to those who may be interested: Dr. Kinreich's group at SUNY Downstate Medical Center, NY ( https://www.pmbd2.org/) investigates the structural and functional neural networks (fMRI, EEG), genetics, and other phenotypes associated with the risk and resilience factors underlying the development of brain diseases. We use advanced machine learning algorithms and seek a skilled, motivated, and enthusiastic individual with a Master's degree / postdoctoral fellow to join the lab. The position: Education: Candidates must have a Master's degree or a Ph.D. degree (or towards completion) in computational neuroscience, biology, computer science, data science, or a related discipline. Computer and General Skills: Knowledge of experimental statistics and excellent programming skills are required (Python, Matlab). High-level expertise in neuroimaging analyses is a plus. Previous experience in machine learning analysis and computational modeling is desirable. Takes initiative. Strong communications skills and research productivity, as well as the ability to work effectively in a research team. Duties and Responsibilities: • Managing and analyzing big data, including neuroimaging, genetics, and clinical data • Writing machine learning programs in Python and Matlab to identify patterns in data • Writing manuscripts • Presenting findings at national conferences and local seminars/meetings This job is available immediately for 2 years. Job is open until filled. Salary will be commensurate with experience and qualifications according to NIH scales. Candidates should send their CV, representative publications, and contact information of two references to Sivan Kinreich, email: sivan.kinreich(a)downstate.edu Sivan Kinreich, Ph.D. Department of Psychiatry Prediction Modeling and Biomarker Discovery of Brain Disorders lab (PMBD2) Henri Begleiter Neurodynamics Laboratory SUNY Downstate Medical Center 450 Clarkson Ave. Brooklyn, NY 11203 Tel: 718-270-3322 646-775-8509 Email: sivan.kinreich(a)downstate.edu sivankinreich(a)gmail.com ________________________________ The contents of this email message and any attachments are confidential and are intended solely for the addressee. The information may also be legally privileged. This transmission is sent in trust, for the sole purpose of delivery to the intended recipient. If you have received this transmission in error, any use, reproduction or dissemination of this transmission is strictly prohibited. If you are not the intended recipient, please immediately notify sender by reply email or by (718) 270-HELP.

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FLUX workshop for MEG data analysis
by Qiaoyu Chen 26 Mar '24

26 Mar '24

[cid:e934249d-37a9-41ef-9696-bb8c8f3992cf]Toolkit in Using the FLUX Pipeline for MEG Research Join us for an immersive learning experience using the FLUX pipeline for MEG data analysis Toolkit at the Centre for Human Brain Health at the University of Birmingham from 11th -14th June 2024. The FLUX pipeline<https://www.neuosc.com/single-project>, is an approach for analysing Magnetoencephalography (MEG) data using state-of-of-the art approaches and standards. Whether you are a newcomer to research using MEG or a healthcare professional integrating MEG into clinical practice, this course is designed to elevate your skills and advance your research capabilities. · Gain practical skills: Learn to streamline data preprocessing, event-related field spectral analysis, source modeling, multi-variate pattern analysis, and reporting using the FLUX pipeline. This pipeline is based on the widely used MNE-Python toolbox. · Enhance research practices: Learn the embraces practices for data curation (BIDS), reproducible research, open science, and standardized reporting empowering you to publish reliable and transparent findings. · Cognitive Neuroscience and Clinical Research: Learn how the FLUX pipeline is used in our MEG research projects. · Engage in interactive learning: Connect with world-leading experts and fellow attendees in discussions, exercises, and networking opportunities, fostering valuable collaborations and knowledge exchange. Application (pre-registration) deadline: 15th April 2024, 11:59 pm (GMT) Join us at the Centre for Human Brain Health for the FLUX toolkit course<https://www.neuosc.com/flux-toolkit>! For pre-registration, please visit https://www.neuosc.com/pre-registration. Contact us at q.chen.5(a)bham.ac.uk<mailto:q.chen.5@bham.ac.uk> for further details.

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Cogitate Connectivity Data Challenge at BIOMAG 2024
by Qiaoyu Chen 26 Mar '24

26 Mar '24

We’re thrilled to invite researchers and enthusiasts to the Cogitate Connectivity Data Challenge<https://www.arc-cogitate.com/biomag-2024>, a featured event at BIOMAG 2024<https://www.biomag2024.org/cms/call-for-submissions-2-2/>! [cid:00d63bba-7772-41cb-8330-edb48529bde1] What’s the Challenge About? The Cogitate Connectivity Data Challenge aims to scrutinize contrasting predictions of two neuroscientific theories of consciousness: Global Neuronal Workspace Theory (GNWT) and Integrated Information Theory (IIT). Your task is to explore meaningful measures of functional connectivity using MEG data sets collected from healthy volunteers. MEG data have been collected from approximately 100 participants. The first batch of data will be available from March 25, 2024, setting the stage for your initial discoveries. Following this, the replication dataset will be released on June 15, 2024, offering further opportunities to validate and deepen your findings. Timeline * Data release - Batch 1: March 25, 2024 * Report - First draft/preregistration: June 14, 2024 [23:59 GMT] * Data release - Batch 2: June 15, 2024 * Report - Replication: July 15, 2024 [23:59 GMT] * Competition scoring: July 16 - August 25, 2024 * Competition results: August 26-29 @ BIOMAG 24 Prizes Entries will be evaluated by a board from the Cogitate Consortium, with prizes awarded as follows: * 1st prize: $1000 * 2nd prize: $500 * 3rd prize: $250 The winners will be announced at BIOMAG 2024<https://www.biomag2024.org/cms/call-for-submissions-2-2/> in Sydney (Australia), August 26-29, 2024. For more information, visit the Cogitate Connectivity Data Challenge<https://www.arc-cogitate.com/biomag-2024> website. If you have any questions or need assistance, feel free to reach out to us at cogitateconnectivitychallenge(a)gmail.com<mailto:cogitateconnectivitychallenge@gmail.com>. Best regards, the Organizing Committee

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PhD/Postdoc positions available at the Max Plank Institute in Leipzig (Germany) and BCBL in San Sebastian (Spain)
by Alejandro Tabas 26 Mar '24

26 Mar '24

The Perceptual Inference Group is building an interdisciplinary team of cognitive and computational neuroscientists to work at the interface between machine learning and ultra-high-resolution fMRI. We are currently looking for postdocs and PhD students. Our group investigates how cortical and subcortical populations of the brain work together to infer the content of noisy sensory signals at multiple timescales. We work primarily in the auditory modality and the human brain, but collaborate closely with animal electrophysiologists. The positions are funded by the ERC and there will plenty of funding for conferences, traveling between Leipzig and San Sebastian, and visiting our large network of international collaborators. The positions will be primarily based in one of the two cities and traveling will be optional. Ideal candidates will have a background in either cognitive neuroscience (including experimental psychology) or a quantitative discipline (physics, computer science, statistics, or related) and a keen interest in building models of brain function. Experience on layer-fMRI, probabilistic modelling, high-resolution fMRI data analysis, state-space models, auditory experimental paradigms, and/or predictive processing are bonuses. For more information and for applying, please check: (For the PhD/Postdoc positions based in San Sebastian): https://www.bcbl.eu/en/join-us/job-offers (Job offers from the Perceptual Inference Group) (For the PhD/Postdoc position based in Leipzig): https://recruitingapp-5218.de.umantis.com/Vacancies/412/Description/2/Defau… For questions and/or enquires please feel free to contact me at tabas[at]bcbl[dot]eu or tabas[at]cbs[dot]mpg[dot]de, I'm more than happy to chat informally about the positions! Cheers, Alejandro.

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Neuroscience and Artificial Intelligence meeting - Bordeaux May 23-24
by Arthur Leblois 25 Mar '24

25 Mar '24

Dear compneuro list members, The French Society for Neuroscience organizes a meeting on *Neuroscience and Artificial intelligence <https://www.neurosciences.asso.fr/JT2024/>*, taking place on the 23 and 24rd of May 2024 in Bordeaux, France. It will be an important place and time to discuss about state of the art in the fields joining neuroscience and AI developments. Also plenty of time to debate about current technical, theoretical, and ethical issues, and of future directions to take, which should impact way beyond neuroscience. Early bird registration <https://www.neurosciences.asso.fr/JT2024/inscriptions>on th*e 31st of March*, registration deadline 7th of May. Please forward to your colleagues, collaborators, and advertise in your respective networks! Looking forward to seeing you in Bordeaux! Arthur Leblois, Emmanuel Procyk, and Nicolas Rougier, coordinators

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School of Ideas in Neuroscience 2024: Deadline March 29th
by Mateusz Kostecki 25 Mar '24

25 Mar '24

Hello! We would like to remind you that the deadline for application to School of Ideas in Neuroscience 2024* is Friday, March 29th!* How the knowledge in neuroscience is accumulated? How can we make sense of the terabytes of empirical data we collect every day? In everyday work, we often forget that every scientific endeavour is embedded in a broader theoretical framework. At the same time, most courses and workshops in neuroscience teach us experimental techniques, giving us more tools to gather more data. But, we are not taught how to develop ideas and integrate our research with the existing knowledge. *We believe that theoretical thinking and idea development are skills that can be trained just as new methodologies and data analysis tools*. At our school, we aim to teach participants how to think theoretically to collect data that makes sense and to make sense of collected data! Come to Warsaw to discuss the most exciting theories and ideas with neuroscientists & philosophers! We provide beautiful surroundings, great atmosphere and a lot of time to talk and think together. The school will take place in Warsaw, *July 9th - July 15th 2024*, in the famous historical building of Polish Academy of Sciences Museum of the Earth, in the beautiful park area of the city. *The fee is EUR 550, but we offer fee waivers and travel grants*. Please find more info and the application form here - https://nenckiopenlab.org/school-of-ideas-2024/ Best, School of Ideas Team -- --- Mateusz Kostecki PhD Student Knapska Laboratory Nencki Institute 02-093 Warsaw, Pasteura 3, Poland https://twitter.com/mtkostecki https://evolvingbehavior.blog/

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CFP: Workshops in conjunction with FRCCS 2024, Montpellier, France May 28, 2024
by Hocine Cherifi 25 Mar '24

25 Mar '24

We encourage researchers to participate in the FRCCS 2024 <https://iutdijon.u-bourgogne.fr/ccs-france/> workshops to share their insights and foster interdisciplinary collaborations in the study of complex systems. *Workshops* · Modeling Cities and Regions as Complex and Evolving Systems · Beauty in Complexity · Network Sparsification & beyond *Important dates* Submission Deadline: *April 14* Final Decisions Released:* April 17* Camera-Ready Deadline: *April 30* *1) **Modeling Cities and Regions as Complex and Evolving Systems* <https://iutdijon.u-bourgogne.fr/ccs-france/workshop-on-modeling-cities-and-…> Cities consist of interacting entities, such as people and infrastructure, and exhibit emergent properties, which appear additionally to the sum of the isolated properties. This makes cities a prime example of complex systems. Accordingly, complexity theories and methods are particularly relevant to their study. By focusing on the commonalities that underpin urban systems, the workshop seeks to foster interdisciplinary dialogue and explore novel approaches to studying cities as complex entities. *More info at: * *https://iutdijon.u-bourgogne.fr/ccs-france/workshop-on-modeling-cities-and-regions-as-complex-and-evolving-systems/* <https://iutdijon.u-bourgogne.fr/ccs-france/workshop-on-modeling-cities-and-…> *Workshop chair* *Daniela Cialfi - NRCouncil of Italy - **danielacialfi(a)gmail.com <danielacialfi(a)gmail.com>* *2) **Beauty in Complexity* <https://iutdijon.u-bourgogne.fr/ccs-france/beauty-in-complexity/> The Beauty in Complexity exhibition invites researchers to share the visual wonders of their work with a wide and diverse audience. Whether it's a photograph, diagram, visualization, or montage, we encourage submissions that evoke curiosity and wonder. We seek captivating visuals showcasing the beauty found within complex systems research. More info at: https://iutdijon.u-bourgogne.fr/ccs-france/beauty-in-complexity/ *Workshop chairs* Benjamin Renoust - *Median Technologies,- renoust@gmail <benjamin.renoust(a)mediantechnologies.com>.com *Arnaud Sallaberry - *LIRMM *- *arnaud.sallaberry(a)lirmm.fr* <arnaud.sallaberry(a)lirmm.fr> *3) **Network Sparsification & beyond* <https://iutdijon.u-bourgogne.fr/ccs-france/complex-network-sparsification/> Numerous algorithms are designed to construct simpler or smaller network representations to address scalability and performance issues. This workshop aims to bring together researchers working on the broad theme of network simplification and discuss graph reduction methods and their applications. More info at: https://iutdijon.u-bourgogne.fr/ccs-france/complex-network-sparsification/ *Workshop chairs* Hamida Seba -* University Lyon 1- **Hamida.seba(a)univ-lyon1.fr* <Hamida.seba(a)univ-lyon1.fr> Hocine Cherifi* - University of Burgundy - **hocine.cherifi(a)u-bourgogne.fr* <hocine.cherifi(a)u-bourgogne.fr> Join us at COMPLEX NETWORKS 2024 <https://www.complexnetworks.org/> *-------------------------* Hocine CHERIFI University of Burgundy Franche-Comté Laboratoire* I*nterdisciplinaire *C*arnot de *B*ourgogne - ICB UMR 6303 CNRS Editor in Chief Plos Complex Systems <https://plos.org/complex-systems-research-journal/#:~:text=PLOS%20Complex%2….> Founding & Adisory Editor Applied Network Science <https://appliednetsci.springeropen.com/> Editorial Board member PLOS One <https://journals.plos.org/plosone/>, IEEE ACCESS <https://ieeeaccess.ieee.org/?http%3A%2F%2Fieeeaccess_ieee_org%2F>, Scientific Reports <https://www.nature.com/srep/>, Journal of Imaging <https://www.mdpi.com/journal/jimaging>, Quality and Quantity <https://www.springer.com/journal/11135/>, Computational Social Networks <https://computationalsocialnetworks.springeropen.com/>, Complex Systems <https://www.complex-systems.com/>

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World wide VVTNS series: Wednesday, March 27 at 11am (EDT), Lorenzo Fontolan Université Aix-Marseille
by David Hansel 24 Mar '24

24 Mar '24

Important: North America moved to daylight saving time on March 10 Please check the time in your country (e.g 4 pm CET) [image: VVTNS.png] https://www.wwtns.online - on twitter: wwtns@TheoreticalWide You are cordially invited to the lecture given by Lorenzo Fontolan Université Aix-Marseille on the topic of "Neural mechanisms of memory-guided behaviour*"* The lecture will be held on zoom on *March 27, 2024*, at *11:00 am EDT * To receive the link: https://www.wwtns.online/register-page *Abstract: *Persistent, stimulus-dependent neuronal activity has been observed in numerous brain areas during tasks that require the temporary maintenance of information. Several competing hypotheses for the neuronal mechanisms underlying persistent activity have been proposed. We have employed data-driven models in conjunction with optogenetic disruptions of neural circuits within memory-guided motor tasks. Our findings revealed a mechanism governed by dynamic attractors, pivotal in sustaining neuronal activity. This mechanism, shaped by time-varying inputs reflecting temporal predictions, is instrumental in regulating the impact of sensory information on the premotor cortex, thereby preserving memory traces from distracting stimuli. We then asked how persistent activity driven by attractor dynamics emerges during motor learning. It has been proposed that activity-dependent synaptic plasticity underpins motor learning, as it can reconfigure network architectures to produce the appropriate neural dynamics for specific behaviors. To verify this hypothesis, we investigated how the mouse premotor cortex acquires specific neural dynamics that govern the planning of movement at different stages of motor learning. We developed network models that replicated the effects of acute manipulations of synaptic plasticity. The models, which display attractor dynamics, also explain flexible behavior after learning has ended. By leveraging the model's predictions, we can formulate testable hypotheses regarding the distinct mechanisms governing movement planning at various stages of the learning process. *About VVTNS : Created as the World Wide Neuroscience Seminar (WWTNS) in November 2020 and renamed in homage to Carl van Vreeswijk in Memoriam (April 20, 2022), its aim is to be a platform to exchange ideas among theoreticians. Speakers have the occasion to talk about theoretical aspects of their work which cannot be discussed in a setting where the majority of the audience consists of experimentalists. The seminars, **held on Wednesdays at 11 am ET,** are 45-50 min long followed by a discussion. The talks are recorded with authorization of the speaker and are available to everybody on our YouTube channel.* ᐧ ᐧ ᐧ ᐧ ᐧ -- 'Life is good ..' (Carl van Vreeswijk, 1962-2022) --------------------------------------- David Hansel Directeur de Recherche au CNRS Co-Group leader Cerebral Dynamics Plasticity and Learning lab., CNRS 45 rue des Saints Peres 75270 Paris Cedex 06 Tel (Cell): +33 607508403 - Fax (33).1.49.27.90.62 *CONFIDENTIALITY AND PRIVACY NOTICE:* *This message and the documents that might be attached, are addressed exclusively to their(s) recipient(s) and may contain privileged or confidential information. The access to this information by people other than those designated is not authorized. If you are not the indicated recipient, you are notified that the use, disclosure and / or copying without authorization is prohibited under current legislation. If you have received this message in error, please kindly inform the sender immediately and proceed to its destruction.* ᐧ

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NeuroBridges 2024 application deadline approaching
by Ahmed El Hady 24 Mar '24

24 Mar '24

*NeuroBridges 2024* *A Mediterranean, Middle Eastern Summer School in Neuroscience* *Deadline to apply: April 1st, 2024* *NeuroBridges 2024* is a summer school which will take place between *September 15 and September 26, 2024* in Le Centre de Conferences Internationales de Cluny, France (CCIC) <https://streaklinks.com/B3KCp_jAQOMpwC7dQwRSV3xc/https%3A%2F%2Fcollegecluny…>. The school will provide an overview of theoretical and experimental frameworks used to study a variety of *decision making* processes. It will cover different model systems from rodents to humans and a plethora of decision making mechanisms. Another objective of Neurobridges is to bring together *Mediterranean and Middle Eastern scientists*, in order to promote scientific cooperation between young researchers from these countries. The organizers of NeuroBridges are convinced that such scientific collaborations can lead to personal relations, which eventually may alleviate the political distress in the Middle East. The school is intended for graduate students and postdocs, primarily, but not only, from the Middle East and the Mediterranean region, either working in their home countries or abroad. Applicants should have some background in related fields in neuroscience or cognitive psychology. *All costs of registration and accommodation will be covered by the organizers. A limited number of travel grants will be also be available*. *NeuroBridges 2024 Faculty:* * Alaa Ahmed (U. Colorado) * Ahmed El Hady ( Uni Konstanz / Max Planck Institute) * Rava Azeredo da Silveira (IOB and CNRS) * Sylvie Granon (Université Paris-Saclay) * David Hansel (CNRS) * Carole Levenes (CNRS) * Yonatan Loewenstein (Hebrew U.) * Eran Lottem (Hebrew U.) * Drazen Prelec (MIT) * Reza Shadmehr (John Hopkins U.) * Haim Sompolinsky (Hebrew U. and Harvard) * *NeuroBridges*is co-organized by Ahmed El Hady (Uni Konstanz / Max Planck Institute), David Hansel (CNRS, Paris), Yonatan Loewenstein (Hebrew University of Jerusalem, Israel) and Carole Levenes (CNRS, Paris). ** *NeuroBridges 2024* is supported by the Simons Foundation, the ANR and ELSC, and is in partnership with VVTNS (https://www.wwtns.online/ <https://www.wwtns.online/>). For more information and application, visit our website: https://neurobridges.net/ *Contact us:*neurobridges2024@gmail.com <mailto:neurobridges2023@gmail.com>

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