January 2024 - Comp-neuro - lists.cnsorg.org

Late-breaking poster abstract submission for the 32nd Annual Computational Neuroscience Meeting ends on June 15
by Rubchinsky, Leonid L June 11, 2025

June 11, 2025

Dear Colleagues, We would like to remind that the late-breaking poster abstracts submission at CNS*2023 ends on June 15. CNS*2023, 32nd Annual Computational Neuroscience Meeting, will be in Leipzig, Germany, on July 15-19, 2023. The information about the meeting and abstract submission can be found here: Registration: https://ocns.memberclicks.net/cns-2023-registration Abstract submission: https://www.cnsorg.org/cns-2023-abstract-submission CNS*2023 information: https://www.cnsorg.org/cns-2023 With kind regards, Leonid Rubchinsky OCNS Vice President *********************** Leonid Rubchinsky, PhD Professor Department of Mathematical Sciences, Indiana University Purdue University Indianapolis Stark Neurosciences Research Institute, Indiana University School of Medicine 402 N. Blackford St Indianapolis, IN 46202-3216 lrubchin(a)iupui.edu http://www.math.iupui.edu/~lrubchin ***********************

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Postdoctoral Researcher position at Goettingen Campus Institute for Dynamics of Biological Networks, University of Goettingen
by von Behren, Christina Dec. 16, 2024

Dec. 16, 2024

Dear Scientists, The Göttingen Campus Institute for Dynamics of Biological Networks (CIDBN)<https://www.uni-goettingen.de/de/608362.html> invites applications for a position of Postdoctoral Researcher in Computational Biophysics (all genders welcome) The position will be full-time (currently 39,8 hours/week), German pay grade 13 TV-L, starting as soon as possible. The CIDBN Department "Physics of Biological Systems", headed by Prof. Fred Wolf, offers a fixed-term contract until June 30, 2025 with the perspective of an extension commensurate with building a competitive track record at the frontier of computational biophysics and neural circuit theory. Information is processed in brain circuits through the coordinated action of large-scale circuits of neurons and synapses. Ultimately, it is the nano-scale molecular architecture of neuronal synapses that can make or break the power of neural circuit computation. Progress in a broad suite of nanoscopy techniques is currently uncovering the molecular-level design of synapses subserving functions such as working memory or sensory coding. The spatio-temporal operation of these nano-machines and the efficiency of their design, however, remain to be understood and are core research aims of the Göttingen Collaborative Research Centre (CRC) 1286 "Quantitative Synaptology"<https://www.sfb1286.de/?lang=en>. We are inviting applications from theoretical biophysicists, molecular systems biologists, or computational scientists with an ambition to pioneer computational studies of synaptic functional design. We offer a stimulating environment of theoretical neuroscientists, neural data-scientists, and cutting-edge experimentalists associated with CRC 1286. In addition, the institute provides dedicated support for high-performance computing. We are dedicated to supporting the growth of original research personalities at the frontier of computational science and neural circuit theory. The successful applicant will hold an excellent PhD in physics, applied mathematics, computer science, or equivalent, and have a strong interest in high-performance computing in neuroscience or cellular systems biology. We expect excellent analytical and coding skills, interest in working in a transdisciplinary team as well as excellence in scientific writing and reasoning. Experience in non-equilibrium statistical physics, stochastic dynamics, membrane biophysics, ion-channel and biochemical kinetics, buffered Ca-diffusion, and Ca-exocytosis coupling would be advantageous. The Göttingen Campus is a leading center of neuroscience in Europe hosting numerous internationally renowned research institutions, including the University, the University Medical Center, two life science Max Planck Institutes, the European Neuroscience Institute, the German Primate Center, and the Bernstein Center for Computational Neuroscience Göttingen. The CIDBN is a newly founded transdisciplinary institute whose mission is to foster frontier research at the border of the exact and biological sciences. The University of Göttingen is an equal opportunities employer and places particular emphasis on fostering career opportunities for women. Qualified women are therefore strongly encouraged to apply. The university has committed itself to being a family-friendly institution and supports their employees in balancing work and family life. The mission of the University is to employ a greater number of severely disabled persons. Applications from severely disabled persons with equivalent qualifications will be given preference. Please send your e-mail application in one single PDF-document, including a letter of motivation, your curriculum vitae with a list of publications, copies of your certificates and contact information of two references to cidbn(a)uni-goettingen.de<mailto:cidbn@uni-goettingen.de> (subject: Postdoc CIDBN). The position remains open until filled. Georg-August-Universität Göttingen Göttingen Campus Institute for Dynamics of Biological Networks Heinrich-Düker-Weg 12, 37073 Göttingen. If you have any questions, please contact Prof. Fred Wolf via e-mail: fred.wolf(a)ds.mpg.de<mailto:fred.wolf@ds.mpg.de>. Please note: With submission of your application, you accept the processing of your applicant data in terms of data-protection law. Further information on the legal basis and data usage is provided in the Hinweisblatt zur Datenschutzgrundverordnung (DSGVO) https://www.uni-goettingen.de/hinweisdsgvo <https://www.uni-goettingen.de/hinweisdsgvo%20> Best regards, Christina von Behren ------ Goettingen Campus Institute for Dynamics of Biological Networks Bernstein Center for Computational Neuroscience Goettingen University of Goettingen Heinrich-Dueker-Weg 12 37073 Goettingen Germany Tel.: +49-(0)551-39-26674

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Python Package: SER model
by Fabrizio Damicelli Aug. 8, 2024

Aug. 8, 2024

Dear Computational Neuroscience Community, I would like to point you to a potentially useful Python Package that might be of interest for your research, especially in the realm dynamical models and spreading dynamics on networks. "ser": S(usceptible)E(xcited)R(efractory) model on graphs, a dynamical model of spreading excitations. Code Repository: https://github.com/fabridamicelli/ser As of today, a few people already trust it and the package registers >11K total downloads, ~500/month (pypi.org) and has been used already in a few research projects. A few interesting features: - It is light-weight and fast (`numba` accelerated), i.e. many experiments can be simply run on a laptop - Installation and getting started is easy: `pip install ser` - Example notebooks: https://github.com/fabridamicelli/ser/blob/main/examples The SER model is a classical cellular automaton model used to study all sorts of complex systems, ranging from forest fire dynamics to self-organized criticality in the brain. Despite of the simplicity of its setup, it is capable of generating complex emergent dynamics with absolutely non-trivial higher-order statistical properties. To learn more about the SER model and its applications, you might want to check out these references: - Messe et al. (2018). Toward a theory of coactivation patterns in excitable neural networks. doi.org/10.1371/journal.pcbi.1006084 - Haimovici et al. (2013). Brain Organization into Resting State Networks Emerges at Criticality on a Model of the Human Connectome. doi.org/10.1103/PhysRevLett.110.178101 - Damicelli et al. (2019). Topological reinforcement as a principle of modularity emergence in brain networks. doi.org/10.1162/netn_a_00085 Check it out and any feedback/suggestions/bug reports are more than welcome (simply open an issue: https://github.com/fabridamicelli/ser/issues) All the best, Fabrizio Damicelli

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Fully-funded PhD in machine-learning for analysing subject's decisions (Nottingham, UK)
by Mark Humphries April 22, 2024

April 22, 2024

A fully-funded PhD is available with Dr Silvia Maggi and Professor Mark Humphries (University of Nottingham) and Dr Hazem Toutonji (University of Sheffield). Decision-making happens in dynamic environments. Understanding how subjects respond to such a fast-changing world requires approaches that can track subject's choice strategies at the resolution of single trials. We recently developed a Bayesian inference algorithm (Maggi et al., 2023, bioRxiv) that enables trial-resolution tracking of learning and exploration during learning. This project will build on this work to solve crucial problems of determining which of a set of behavioural strategies a subject is using and how to incorporate evidence uncertainty into its detection of the learning of strategies and transitions between them. Using the extended algorithm on datasets of rodents and humans performing decision tasks will let us test a range of hypotheses for how correct decisions are learnt and what innate strategies are used. Application deadline: November 30th 2023 PhD start date: February 1st 2024 Please send all queries to Silvia (silvia.maggi(a)nottingham.ac.uk) or Mark (mark.humphries(a)nottingham.ac.uk) Full details and how to apply here: https://www.findaphd.com/phds/project/cognitive-flexibility-in-dynamic-deci… Professor Mark Humphries | Professor of Computational Neuroscience Lab: humphries-lab.org<https://www.humphries-lab.org/> Twitter: @markdhumphries Public blog: https://medium.com/the-spike Book: "The Spike: An Epic Journey Through the Brain in 2.1 Seconds" (Princeton UP) out now in paperback: https://press.princeton.edu/books/paperback/9780691241487/the-spike This message and any attachment are intended solely for the addressee and may contain confidential information. If you have received this message in error, please contact the sender and delete the email and attachment. Any views or opinions expressed by the author of this email do not necessarily reflect the views of the University of Nottingham. Email communications with the University of Nottingham may be monitored where permitted by law.

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Postdoctoral Research Fellow in Biocomputation at the University of Hertfordshire, UK
by Volker Steuber April 2, 2024

April 2, 2024

Post Title: Research Fellow in Biocomputation SBU/Department: School of Physics, Engineering and Computer Science ________________________________ FTE: 1 FTE (working 37 hours per week) Duration of Contract: Fixed term Contract (3 years) Salary: UH7 £36,333 pa with potential to progress to £43,155 pa on achieving designated skills and experience Annual Leave: 35 days plus standard public holidays and an additional 4 days including the closure of our office between Christmas and New Year Location: College Lane Campus, Hatfield, UK Closing Date: 14th June 2023 Interview Date: To be confirmed Reference Number: 048016 Date advert placed: 17th May 2023 Main duties and responsibilities We are seeking a full-time Research Fellow to join the Biocomputation Research Group in the School of Physics, Engineering and Computer Science at the University of Hertfordshire to conduct high-quality research in Computational Neuroscience. The successful candidate’s research will involve synergistic collaborations with a multidisciplinary team to investigate brain processes using methodologies such as computational modelling, machine learning and AI. Research to be conducted could, e.g., comprise modelling brain circuits like the olfactory bulb or the cerebellum and simulating and analysing their function. Additional impact could arise in machine learning, AI, data science, neurorobotics and neuromorphic computing. The successful candidate will be expected to establish a programme of research in collaboration with colleagues at UH and partner organisations in the UK and abroad. Leading the preparation and publication of research manuscripts is a key aspect of the role. Contributions to the preparation of research proposals and applications for funding to external bodies, such as the European Commission and the UK Research and Innovation (UKRI) are expected. The postholder will create opportunities to maximise research activities, capturing relevant evidence to support impact and engaging with external partners and stakeholders. Skill and experience required * Strong theoretical, computational and programming background in computational modelling and/or machine learning and/or data science and/or AI. * Background and expertise in computational neuroscience (e.g. spiking neural networks, brain function and anatomy, analysis of brain data). * Demonstrated experience to conduct independent research in computational neuroscience or a related field, e.g., through published research papers or monographs. * Applicants must be proficient in both written and oral English * The applicants must be able to work independently and in a structured manner and demonstrate good collaborative skills. Qualifications required • An undergraduate honours degree (or equivalent) in Computer Science, Physics, Mathematics, Neuroscience, or a related discipline and a PhD (or expectation that one will soon be awarded) in a relevant discipline. An appointment to this role may require an Academic Technology Approval Scheme (ATAS) certificate. Contact Details/Informal Enquiries: Professor Volker Steuber, v.steuber(a)herts.ac.uk Professor Michael Schmuker, m.schmuker(a)herts.ac.uk Apply through: https://www.jobs.herts.ac.uk/go/048016 Our vision is to transform lives: UH is committed to Equality, Diversity and Inclusion and building a diverse community. We welcome applications from suitably qualified and eligible candidates regardless of their protected characteristics and recognise there are different ways applicants may achieve the criteria in this document. We offer a range of employee benefits including generous annual leave, flexible location opportunities within the UK, discounted Sports Village memberships and free Active Staff sessions, personal and professional development and family-friendly policies. Volker Steuber Professor of Computational Neuroscience Biocomputation Research Group School of Physics, Engineering and Computer Science University of Hertfordshire College Lane, Hatfield, AL10 9AB, UK biocomputation.herts.ac.uk<http://biocomputation.herts.ac.uk>

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Postdoc Position in Moral Artificial Intelligence (Jointly sponsored by Duke and CMU)
by Dr Jana Schaich Borg, Ph.D. March 11, 2024

March 11, 2024

Postdoc available in our interdisciplinary Moral AI group! Description: We have an opening for a joint two-year postdoctoral position at the School of Computer Science at Carnegie Mellon University and the Social Science Research Institute, Duke Institute for Brain Sciences, and Kenan Institute for Ethics at Duke University (with the possibility of renewal for a third year). The postdoc can be employed through any of these departments in either University, depending on their preference. The candidate is expected to live in either Pittsburgh or Durham depending on their chosen home department, but will be asked to travel occasionally to the other location. The focus of the position is on conducting impactful research on moral artificial intelligence, addressing problems such as: Designing artificial intelligence systems to model and predict human moral judgments Designing effective elicitation mechanisms and interfaces to capture moral preferences Developing techniques for implementing and evaluating AI systems that are based on these modeled preferences, and assessing the dynamic impact of these systems on the preferences and behavior of users who interact with them Qualifications: Applicants should hold a Ph.D. in computer science, statistics, mathematics, computational neuroscience, computational cognitive science, or related technical fields and have expertise in Machine Learning and AI / statistics / data science. Additional background in moral psychology, moral philosophy, (AI or other) ethics, HCI, social decision-making and/or social science is preferred, but not required. Interested applicants should apply online <https://apply.interfolio.com/113237> <https://apply.interfolio.com/113237> (https://apply.interfolio.com/113237) or contact Dr. Jana Schaich Borg via email (js524(a)duke.edu) including a CV and statement of research interests, and the name of three referees that can provide letters of recommendation. We are strongly committed to a diverse academic environment and place high priority on attracting underrepresented candidates.

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Postdoctoral Researcher in Computational Neuroscience: Effects of Neuromodulation on Learning in SRNNs
by Fleur Zeldenrust Feb. 5, 2024

Feb. 5, 2024

*The 'Biophysics of Neural Computation' group in Nijmegen (PI: dr. Fleur Zeldenrust) is looking for a postdoctoral researcher (26 months) to study the effects of neuromodulators in biologically realistic networks and learning tasks in the Vidi project 'Top-down neuromodulation and bottom-up network computation, a computational study'. You will use cellular and behavioural data gathered by our department over the previous five years on dopamine, acetylcholine and serotonin in mouse barrel cortex, to bridge the gap between single cell, network and behavioural effects.* The aim of this project is to explain the effects of neuromodulation on task performance in biologically realistic spiking recurrent neural networks (SRNNs). You will use biologically realistic learning frameworks, such as force learning, to study how network structure influences task performance. You will use existing open source data to train a SRNN on a pole detection task <https://linkinghub.elsevier.com/retrieve/pii/S0896627315002512> (for rodents using their whiskers) and incorporate realistic network properties of the (barrel) cortex based on our *lab's measurements <https://link.springer.com/article/10.1007/s12021-022-09576-5>*. Next, you will incorporate the cellular effects of dopamine, acetylcholine and serotonin that we have measured (see *this paper <https://doi.org/10.1093/gigascience/giy147>* and *this preprint <https://www.biorxiv.org/content/10.1101/2022.01.12.476007v1>*) into the network, and investigate their effects on task performance. In particular, you will research the effects of biologically realistic network properties (balance between excitation and inhibition and the resulting chaotic activity, non-linear neuronal input-output relations, patterns in connectivity, Dale's law) and incorporate known neuron and network effects. You will build on the single cell data, network models and analysis methods available in our group, and your results will be incorporated into our group's further research to develop and validate efficient coding models of (somatosensory) perception. We are therefore looking for a team player who can collaborate well with the other group members, and is willing to both learn from them and share their knowledge. *Your profile:* Profile - You hold a PhD in computational neuroscience, mathematics, physics, computer science, AI or a similar computational field. - You have experience in working with machine learning models in (computational) neuroscience and are able to perform network simulations, analytical derivations and advanced data analysis. - You are a highly motivated, independent, critical and creative researcher who wants to bridge the gap between real data and abstract theoretical models. - You are a team player, ready to collaborate in a diverse multidisciplinary research group. - You have an excellent command of spoken and written English. - You have experience in coding (Python and/or Matlab). We are *Our profile:* You will be appointed at the *Biophysics of Neural Computation <https://www.ru.nl/donders/research/theme-4-neural-computation-neurotechnolo…>* group, *Donders Centre for Neuroscience <https://www.ru.nl/science/dcn/>*, *Donders Institute for Brain, Cognition and Behaviour <https://www.ru.nl/donders/>*. <https://www.ru.nl/donders/> This vibrant and multidisciplinary institute studies the organisation and function of neural circuits across scales and techniques, from genes and proteins to behaviour and from in vitro and in vivo experiments to computational modelling. It is an open and international environment, where young scientists from different backgrounds share a fascination for the interaction between brain structure and function. Postdoctoral researchers enjoy a *lively community <https://www.ru.nl/donders/talent-education/postdoctoral-researchers/>* and specialised support. *We offer:* We offer - It concerns an employment for 0.8 - 1.0 FTE. - The gross monthly salary amounts to a minimum of €3,226 and a maximum of €5,090 based on a 38-hour working week, depending on previous education and number of years of relevant work experience (*salary scale 10 <https://www.ru.nl/en/staff/services/salary-and-selection-model/salary/amoun…>* ). - You will receive 8% holiday allowance and 8.3% end-of-year bonus. - You will be employed on the basis of a temporary contract for 26 months. - You will be able to use our *Dual Career and Family Care Services <https://www.ru.nl/en/staff/services/living-working-and-studying-netherlands…>*. Our Dual Career and Family Care Officer can assist you with family-related support, help your partner or spouse prepare for the local labour market, provide customized support in their search for employment and help your family settle in Nijmegen. - Working for us means getting extra days off. In case of full-time employment, you can choose *between 30 or 41 <https://www.ru.nl/en/staff/services/employment-conditions/working-time/flex…>* <https://www.ru.nl/en/staff/services/employment-conditions/working-time/flex…>days of annual leave instead of the legally allotted 20. *Please, apply via the website before February 11th: * https://www.ru.nl/en/working-at/job-opportunities/postdoctoral-researcher-i… Profil -- Fleur Zeldenrust Associate Professor Donders Institute for Brain, Cognition and Behaviour Donders Centre for Neuroscience Faculty of Science, Radboud University Heyendaalseweg 135, room HG 00.111 6525 AJ Nijmegen, the Netherlands tel +31 24 36 53195 fleurzeldenrust.nl *Due to my own family/work balance, you may receive emails from me outside of normal working hours. I do not expect a response from you outside of your own working pattern, nor do I expect an immediate response when you are working.*

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[Meetings] Extended Deadline - 15 February: 2024 Nengo Summer School
by Michael Furlong Jan. 31, 2024

Jan. 31, 2024

Dear colleagues, The deadline for application submission to the Nengo Summer School, has been extended to February 15th, 2024. Applications can be submitted at this link:https://forms.gle/xhkNENnpPHeBXu5W7 [All details about this school can be found online at https://www.nengo.ai/summer-school] The Centre for Theoretical Neuroscience at the University of Waterloo is excited to announce our 9th annual Nengo summer school on large-scale brain modelling and neuromorphic computing. This two-week school will teach participants to use the Nengo simulation package to build state-of-the-art cognitive and neural models to run both in simulation and on neuromorphic hardware. Summer school participants will be given on-site access to neuromorphic hardware and will learn to run high-level applications using Nengo! More generally, Nengo provides users with a versatile and powerful environment for designing cognitive and neural systems and has been used to build what is currently the world's largest functional brain model, Spaun, which includes spiking deep learning, reinforcement learning, adaptive motor control, and cognitive control networks. For a look at the last in-person summer school, check out this short video: https://youtu.be/vRcN5-0wdQE We welcome applications from all interested graduate students, postdocs, professors, and industry professionals with a relevant background. ***Application Deadline: February 15, 2024*** Format: A combination of tutorials and project-based work. Participants are encouraged to bring their own ideas for projects, which may focus on testing hypotheses, modelling neural or cognitive data, implementing specific behavioural functions with neurons, expanding past models, or providing a proof-of-concept of various neural mechanisms. Hands-on tutorials, work on individual or group projects, and talks from invited faculty members will make up the bulk of day-to-day activities. A project demonstration event will be held on the last day of the school, with prizes for strong projects! Participants will have the opportunity to learn how to: * interface Nengo with various kinds of neuromorphic hardware (e.g. BrainDrop, SpiNNaker) * build perceptual, motor, and sophisticated cognitive models using spiking neurons * model anatomical, electrophysiological, cognitive, and behavioural data * use a variety of single cell models within a large-scale model  * integrate machine learning methods into biologically oriented models * interface Nengo with cameras and robotic systems * implement modern nonlinear control methods in neural models * and much more… Date and Location: June 2nd to June 14th, 2024 at the University of Waterloo, Ontario, Canada. Applications: Please visit http://www.nengo.ai/summer-school, where you can find more information regarding costs, travel, lodging, along with an application form listing required materials. If you have any questions about the school or the application process, please contact Michael Furlong (michael.furlong(a)uwaterloo.ca) The school is partly supported by ABR, Inc. We look forward to hearing from you!

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Open Postdoctoral Position in the Rich Lab: An Update
by Rich, Scott Jan. 31, 2024

Jan. 31, 2024

Dear Comp-Neuro Listserv, I am still accepting applications for the open postdoctoral position<https://jobs.hr.uconn.edu/cw/en-us/job/498073/postdoctoral-research-associa…> in my new lab at the University of Connecticut. While applications are being considered on a “rolling” basis, I’m currently planning to perform the first batch of interviews in late February/early March. If you’d like to be considered for a potential interview during this time frame, please apply as soon as possible. As a reminder, I’m also recruiting graduate students. If you’re interested, please express your interest by filling out this Google Form<https://forms.gle/5wtYfXrGuHC2QmLh8> and be sure to apply officially to UConn’s Department of Physiology and Neurobiology (following the instructions here<https://pnb.uconn.edu/graduate/graduate-application-and-admission-informati…>). If you have any questions about these and other opportunities in my lab, please don’t hesitate to contact me. ___________ Sincerely, Scott Rich, Ph.D. Assistant Professor, University of Connecticut Department of Physiology and Neurobiology pnb.uconn.edu/person/scott-rich/ <http://pnb.uconn.edu/person/scott-rich/>scottrich.mystrikingly.com<http://scottrich.mystrikingly.com>

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CFP FRCCS 2024 Montpellier, France May 29 – 31, 2024
by Hocine Cherifi Jan. 31, 2024

Jan. 31, 2024

Fourth* F*rench* R*egional* C*onference on* C*omplex* S*ystems May 29 – 31, 2024 Montpellier, France *FRCCS 2024* <https://iutdijon.u-bourgogne.fr/ccs-france/> After successfully hosting the conference in Dijon in 2021, Paris in 2022, and Le Havre in 2023, the fourth edition of the French Regional Conference on Complex Systems (FRCCS 2024) will be held in Montpellier, France. This single track international conference organized by CSS France <https://www.cssfrance.org/> serves as a platform to foster interdisciplinary exchanges among researchers from various scientific disciplines and diverse backgrounds, including sociology, economics, history, management, archaeology, geography, linguistics, statistics, mathematics, and computer science. FRCCS 2024 provides a valuable opportunity for participants to meet in France, exchange and promote ideas, facilitating the cross-fertilization of recent research work, industrial advancements, and original applications. Moreover, the conference emphasizes research topics with a high societal impact, showcasing the significance of complexity science in addressing complex societal challenges. Join us in Montpellier as we collectively strive to better understand complexity and its implications for society. You are cordially invited to submit your contribution until *February 21, 2024.* Finalized work (published or unpublished) and work in progress are welcome. Two types of contributions are accepted: · *Papers* about *original research* (up to 12 pages) · *Extended Abstract* about *published or unpublished* research (3 to 4 pages). *Keynote Speakers* · Petter Holme <https://petterhol.me/>, Aalto University, Finland · Sonia Kéfi <https://biodicee.edu.umontpellier.fr/who-we-are/sonia-kefi/>, Université de Montpellier, France · Natasa Przulj <https://www.bsc.es/przulj-natasa>, Barcelona Supercomputing Center, Spain · Boleslaw K. Szymanski <https://www.cs.rpi.edu/~szymansk/> Rensselaer Polytechnic Institute, USA · Ingmar Weber <https://ingmarweber.de/>, Saarland University, Germany *Publication* o Contributions will be included in the conference proceedings (With ISBN) o *Selected submissions of unpublished work will be invited for publication in special issues (fast track procedure) **of the journals:* o Applied Network Science, <https://appliednetsci.springeropen.com/> edited by Springer o Complexity, <https://www.hindawi.com/journals/complexity/?utm_source=google&utm_medium=c…> edited by Hindawi *Submission * · Submit on CMT Microsoft at: https://cmt3.research.microsoft.com/FRCCS2024/ · *Select the Track: FRCCS2024* *Topics include, but are not limited to: * · *Foundations of complex systems * - Self-organization, non-linear dynamics, statistical physics, mathematical modeling and simulation, conceptual frameworks, ways of thinking, methodologies and methods, philosophy of complexity, knowledge systems, Complexity and information, Dynamics and self-organization, structure and dynamics at several scales, self-similarity, fractals - *Complex Networks * - Structure & Dynamics, Multilayer and Multiplex Networks, Adaptive Networks, Temporal Networks, Centrality, Patterns, Cliques, Communities, Epidemics, Rumors, Control, Synchronization, Reputation, Influence, Viral Marketing, Link Prediction, Network Visualization, Network Digging, Network Embedding & Learning. - *Neuroscience, **Linguistics* - Evolution of language, social consensus, artificial intelligence, cognitive processes & education, Narrative complexity - *Economics & Finance* - Game Theory, Stock Markets and Crises, Financial Systems, Risk Management, Globalization, Economics and Markets, Blockchain, Bitcoins, Markets and Employment - *Infrastructure, planning, and environment * - critical infrastructure, urban planning, mobility, transport and energy, smart cities, urban development, urban sciences - *Biological and (bio)medical complexity * - biological networks, systems biology, evolution, natural sciences, medicine and physiology, dynamics of biological coordination, aging - *Social complexity* o social networks, computational social sciences, socio-ecological systems, social groups, processes of change, social evolution, self-organization and democracy, socio-technical systems, collective intelligence, corporate and social structures and dynamics, organizational behavior and management, military and defense systems, social unrest, political networks, interactions between human and natural systems, diffusion/circulation of knowledge, diffusion of innovation - *Socio-Ecological Systems* - Global environmental change, green growth, sustainability & resilience, and culture - *Organisms and populations * - Population biology, collective behavior of animals, ecosystems, ecology, ecological networks, microbiome, speciation, evolution - *Engineering systems and systems of systems* - bioengineering, modified and hybrid biological organisms, multi-agent systems, artificial life, artificial intelligence, robots, communication networks, Internet, traffic systems, distributed control, resilience, artificial resilient systems, complex systems engineering, biologically inspired engineering, synthetic biology - *Complexity in physics and chemistry* - quantum computing, quantum synchronization, quantum chaos, random matrix theory *GENERAL CHAIRS* Roberto Interdonato CIRAD, UMR TETIS, Montpellier Bruno Pinaud LABRI University of Bordeaux Join us at COMPLEX NETWORKS 2024 <https://www.complexnetworks.org/> *-------------------------* Hocine CHERIFI University of Burgundy Franche-Comté Laboratoire* I*nterdisciplinaire *C*arnot de *B*ourgogne - ICB UMR 6303 CNRS Editor in Chief Plos Complex Systems <https://plos.org/complex-systems-research-journal/#:~:text=PLOS%20Complex%2….> Founding & Adisory Editor Applied Network Science <https://appliednetsci.springeropen.com/> Editorial Board member PLOS One <https://journals.plos.org/plosone/>, IEEE ACCESS <https://ieeeaccess.ieee.org/?http%3A%2F%2Fieeeaccess_ieee_org%2F>, Scientific Reports <https://www.nature.com/srep/>, Journal of Imaging <https://www.mdpi.com/journal/jimaging>, Quality and Quantity <https://www.springer.com/journal/11135/>, Computational Social Networks <https://computationalsocialnetworks.springeropen.com/>, Complex Systems <https://www.complex-systems.com/>

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Scientist position at the Allen Institute
by Anton Arkhipov Jan. 30, 2024

Jan. 30, 2024

Dear Colleagues, A Scientist position is open at the Allen Institute in the area of biologically realistic modeling. Please see the job description here: https://alleninstitute.org/careers/jobs/?jobId=A95FAC9B-4F0F-044B-5458-CAA4… The Scientist will develop bio-realistic network simulations at the level of a cortical area and the whole cortex, leveraging our multimodal datasets on brain composition and connectivity and training models on in vivo data using AI approaches. The goal is to use modeling together with experiments from our collaborators to understand the mechanisms underlying brain responses to sensory stimulation, including periodic sensory stimuli and the resulting entrainment of neuronal populations. Please consider applying and reach out if you have any questions. We are looking forward to hearing from you. Best wishes, Anton Arkhipov Investigator Allen Institute Seattle, WA antona(a)alleninstitute.org<mailto:antona@alleninstitute.org>

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Post-doc or Research Engineer position offer: Computational modeling of genetic mutations at cellular level
by Elif Köksal Jan. 30, 2024

Jan. 30, 2024

*Context.* Developmental and epileptic encephalopathies (DEEs) are a group of severe rare diseases where the combined effect of seizures, most often drug resistant, and the non-seizures consequences of the disease etiology, often genetic, entail a debilitating encephalopathy with drastic effects on the neurodevelopmental, psychiatric, and motor abilities of the patients. DEEs due to potassium channel mutations (K-DEEs) are emblematic of this disease presentation. *Rationale.* The mechanisms underlying the relationship between i) the molecular effect of a gene mutation (KCNB1/KCNT1/KCNA2) on specific voltage gated potassium channel function, and ii) the patient-specific phenotypes observed in scalp-recorded EEG signals remain elusive. Computational models inspired from neuronal physiology is now recognized as a most efficient way to bridge the gap between i) changes occurringat the level of neurons and neuronal circuits and ii) electroencephalographic (EEG) signals recorded in patients containing markers of the underlying pathology. *Objective.* The objective of the proposed research position is to design novel neuro-inspired models taking into account the molecular effect of a gene mutation on the specific voltage-gated potassium (K) channel function and the specific phenotypes observed in patients (scalp-recorded EEG signals) and in genetically-modified mice (local field potentials) in which downregulation or upregulation of K channels is induced. *Methods*. Detailed multicompartment models (i.e. including dendrites, soma and axon) will be developed. They will be based on Hodgkin and Huxley's (HH) formalism. They will describe both passive (membrane capacitance, axial resistivity, leakage conductance, and membrane time constant) and active (voltage-gated and ligand-gated ion channels) membrane properties. The channel pathogenic variants of KCNB1/KCNT1/KCNA2 mutations identified in 2 other work packages (1 & 2) will be inserted in the membrane in order to study the impact of the channel mutation on the firing rate curves of considered neuron subtypes, typically pyramidal neurons (PYR), somatostatin (SST-), parvalbumin (PV-), and vasoactive intestinal polypeptide (VIP-) positive interneurons. Optimization methods will be developed for identifying optimal parameters minimizing the distance between real and simulated electrophysiological signals (LFPs). Models will use the Hodgkin & Huxley formalism. They will be developed in Python. They will extend already-existing models at cellular level. Strong background is available ( https://perso.univ-rennes1.fr/fabrice.wendling/) *Scientific domains.* Engineering (computational, biomedical); Neuroscience; Neurology; Computer Science (implementation of Python routines into an existing software application named COALIA). *Scientific environment.* This research will benefit from an outstanding clinical research environment, centeredaround the largest curated K-DEE cohorts, coordinated by the Necker reference center for rare epilepsies (Prof. Rima Nabbout), and assembling an extensive group of experts from various specializations, including clinical,electrophysiological, psychological, computational, translational research, biotechnology and pharma industry. *Candidate profile.* The research project is at the interface between biomathematics (neuro-inspired models) and neuroscience/neurology (epilepsy). The Post-doc/Engineer fellow (PhD level) will preferably have a strong background in computational neuroscience/systems biology or in electrical engineering with experience in bio-signal processing. Knowledge in electrophysiology and/or EEG analysis would be an asset. *Contract *The position will be opened March. 1st, 2024 (flexible). The contract is for 3 years (flexible). The employer is the University of Rennes. The competitive salary will be according to experience (2300 Euros net, minimum). The candidate will also have access to the French system benefits. Location in the city of Rennes, France. LTSI-Inserm laboratory, University of Rennes. In addition, the hired person will have the opportunity to actively collaborate with other groups involved in the innov4epik RHU project (2024-2029), funded by the French National Research Agency (ANR). *Contact (please provide resume, cover letter and email of 2 references)* Pascal Benquet (Prof Univ Rennes, LTSI, France) Email: pascal.benquet(a)univ-rennes.fr Fabrice Wendling (DR Inserm, LTSI, France) Email: fabrice.wendling(a)inserm.fr

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PLENA 2024 - Pucon Learning and AI Summit
by Prof Sonja Gruen Jan. 30, 2024

Jan. 30, 2024

Dear Colleagues, The Pucón Learning and AI (PLENA) Summit https://plena.cenia.cl is taking place in the South of South America, in Pucon, Chile this April 8 -12, 2024. Check Chile out here https://www.youtube.com/watch?v=RK3Ou8vq84Y and https://www.youtube.com/watch?v=eSYpegYD4jc . We invite you to explore the intersection of neuroscience and AI, with a particular focus on mechanisms of learning. PLENA is a small gathering of experts and trainees that will provide a platform for AI and experimental neuroscience researchers to delve into the mechanisms of learning at the cellular, systems, and behavioral levels. Upon multiple requests we have set up a rolling application extending to March 8th, 2024. Secure your place by applying as soon as possible. We will be selecting on a first-come-first-serve basis until we have reached our capacity of 120 researchers and trainees. Register here: https://plena.cenia.cl/registration/ See our spectacular and diverse lineup of speakers here: https://plena.cenia.cl/speakers/ We have also added a coordinated sequence of three workshops entitled Bridging Scales from Neural Activity to Learning Machines “from the detailed analysis of neuronal activity to the construction and simulation of full-scale models to the application of abstract learning machines”. Access is included with your registration. Access is included with your registration. See you in Chile! PLENA Scientific Committee: Roberto Araya (U. Montreal, Canada) Christopher Pack (McGill University, Canada) Pedro Maldonado (Universidad de Chile, Chile) Markus Diesmann (Jülich Research Center, Germany) We thank our sponsors, partners and affiliated institutions -- Prof. Dr. Sonja Gruen, Director Inst of Neuroscience and Medicine (INM-6/-10) Tel +49-2461-61-4748 (secr) Computational and Systems Neuroscience & tel +49-2461-61-9301 (lab) Institute for Advanced Simulation (IAS-6) Mob +49-175-2972436 Jülich Research Centre and JARA Institute I Jülich, Germany Theoretical Systems Neurobiology RWTH Aachen University, Aachen, Germany www.csn.fz-juelich.de elephant.readthedocs.io

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Computational neuroscience PhD position in the Mejias lab at Amsterdam
by Jorge Mejias Jan. 30, 2024

Jan. 30, 2024

Dear all, The Mejias lab and the Cognitive and Systems Neuroscience Group at the University of Amsterdam are seeking a highly qualified and motivated candidate for a PhD position in Computational Neuroscience. The position falls under the Horizon Health Europe Consortium grant “Virtual Brain Twins for Personalized Treatment of Psychiatric Disorders”. This Consortium constitutes a large collaboration between different European institutions, aiming to develop personalized brain simulation software (“virtual brain twins”) to improve the diagnosis and treatment of schizophrenia. The main objective of this PhD project is to develop a biologically realistic computational model of the human brain, and use it to study alterations in brain activity associated with schizophrenia. Such model will make use of local neural mass models (developed by our Consortium partners) to simulate multiple brain areas, and will bring them together using structural connectivity data from human subjects. The model will be then used to explore the effects of schizophrenia-related alterations in brain dynamics and function, and to derive patient-specific virtual brain simulations to improve diagnosis and explore treatments in collaboration with clinical Consortium partners. The project will be supervised by Dr. Jorge Mejias, principal investigator in computational neuroscience and leader of the Dutch component of the Consortium, and by Prof. Dr. Cyriel Pennartz, head of the Cognitive and Systems Neuroscience Group. You will closely collaborate with other Consortium members, particularly with the team of Prof. Viktor Jirsa at Aix-Marseille University, and will also benefit from interactions with local colleagues including other theoretical, computational and experimental neuroscientists at the Cognitive and Systems Neuroscience Group. We are looking for candidates with: • a Master's Degree in computational neuroscience or closely related field, with a focus on modeling biological neural systems. Alternatively, a Master Degree in Physics, Mathematics, Computational Science or a closely related field, and a clear background or affinity for brain modeling; • strong quantitative and analytical skills, including calculus, linear algebra, differential equations, dynamical systems, stochastic processes and complex systems; • strong computational/programming skills (preferably with Python), including numerical methods for differential equations, machine learning and data analysis; • a keen, demonstrated interest in neuroscience research; • experience with computational neuroscience modeling projects, with virtual brain simulation engines (e.g. TVB), and/or with high performance computers is considered an advantage; • ability to read and understand relevant neuroscientific, cognitive and clinical literature and use experimental data to build models; • ability to communicate effectively in English, within a multidisciplinary team and in an international context; We offer a temporary contract for 38 hours per week for the duration of 4 years, which will culminate in the defense of your PhD thesis. We will also draft an educational plan that includes attendance of courses and (international) meetings, and you will also assist in teaching and other activities in the lab. The gross monthly salary will range from €2,770 in the first year to €3,539 in the last year, based on a full-time appointment (38 hours per week). Additionally, you will receive every year an 8% holiday allowance and 8.3% end-of-year bonus. A favourable tax agreement, the ‘30% ruling’, may apply to non-Dutch applicants, effectively increasing their net salary. The lab is located in the state-of-the-art facilities of the Science Park at the University of Amsterdam, a top research university with a strong focus on cognition and brain research, and it has good communications with other academic and research centers in the city. As one of the most vibrant cities in Europe, Amsterdam has a rich historical and cultural heritage that includes the UNESCO World Heritage city center and canals, dozens of world-class museums and restaurants, and an exciting nightlife. The city promotes a healthy lifestyle with fantastic work-life balance, plenty of outdoor life, parks and recreational areas, an excellent bicycle path networks and an expat-friendly environment. The application deadline is February 25, 2024. Candidates may apply by following this link: https://vacatures.uva.nl/UvA/job/PhD-position-in-Computational-Neuroscience… Best, Jorge Mejias -- Jorge F. Mejias, PhD Assistant Professor Cognitive and Systems Neuroscience Swammerdam Institute for Life Sciences University of Amsterdam, 1098XH Amsterdam The Netherlands www.ugr.es/~jmejias

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Computational Neuroscience Ph.D. position with FONTOLAN, GUTKIN and KHAZIPOV labs @INMED Marseille
by Lorenzo Fontolan Jan. 30, 2024

Jan. 30, 2024

Ph.D. funding is available through the Alan Turing Centre for Living Systems to work with the *Fontolan* lab in collaboration with the *Khazipov *lab in Marseille and the *Gutkin* lab in Paris. The candidate will develop a *neuronal network model of the early Sharp Waves in the neonatal rodent hippocampus*. More details on the project: https://centuri-livingsystems.org/phd2024-18/ Information about the selection process: https://centuri-livingsystems.org/recruitment/ *Deadline February 15* -- *Desired profile* The Ph.D. student should hold a Master’s degree in *physics/applied mathematics/electrical engineering/computational neuroscience*. Basic skills in modelling of neural/biological systems can be of additional advantage. Of high importance are: i) the ability to work in an interdisciplinary environment, ii) the willingness to dig into the biological intricacies of neural circuits, and iii) to combine analytical and numerical approaches that incorporate experimental data. *Project description* *During development, neuronal networks display peculiar patterns of activity, directly involved in the formation of neuronal circuits. Early Sharp Waves (eSPWs) are the predominant structured activity pattern in the developing entorhinalhippocampal network of neonatal rodents, which is thought to be essential for the formation of the connections between the entorhinal cortex (EC) and the hippocampus. Considerable amount of data on cellular, synaptic and network aspects of EC-driven eSPWs in the neonatal hippocampus has been accumulated recently in the Khazipov team at INMED, yet the generative mechanisms of eSPWs remain elusive. One of the central hypotheses involves the different modes of operation of the early vs late EC-hippocampal network, which is enabled by delated development of GABAergic inhibition and large temporal integration window of excitatory inputs from EC or other hippocampal subnetworks. The aim of this project is to identify the generative mechanism of eSPWs by developing a biologically accurate circuit model of EC-driven eSPWs based on recent data, and formulate specific predictions that will be experimentally tested in the Khazipov lab.* *Objectives* - Construct a comprehensive circuit model of the EC-hippocampal network incorporating cellular, synaptic, and population data to simulate network activity during development, and particularly the genesis of eSPWs. - Identify the key network components of the EC-hippocampal circuit in the generation of eSPW via model predictions. - Test the different hypotheses regarding the generative role of developing EC-hippocampus connectivity in eSPW onset, considering the role of delayed GABAergic inhibition and temporal integration windows of network inputs. *References* - Leinekugel X, Khazipov R, Cannon R, Hirase H, Ben Ari Y, Buzsaki G. (2002) Correlated bursts of activity in the neonatal hippocampus in vivo. Science 296(5575):2049-52 - Valeeva G, Janackova S, Nasretdinov A, Rychkova V, Makarov R, Holmes GL, Khazipov R, Lenck-Santini PP. (2019) Emergence of Coordinated Activity in the Developing Entorhinal-Hippocampal Network. Cereb Cortex 29(2):906-20. - Fontolan L, Hyafil A, Krupa M, Gutkin B. (2013) Analytical insights on theta-gamma coupled neural oscillators. J Math. Neuroscience 3(1):16. - Finkelstein A, Fontolan L, Economo MN, et al. Attractor dynamics gate cortical information flow during decisionmaking. Nat Neurosci 24, 843–850 (2021). https://doi.org/10.1038/s41593-021-00840-6 - Romagnoni A, Colonnese, M, Touboul J and Gutkin B (2020) Progressive Alignment of Inhibitory and Excitatory Delay May Drive a Rapid Developmental Switch in Cortical Network Dynamics, J. Neurophys, 123(5):1583-1599. Doi: 10.1152/jn.00402.2019-- Lorenzo Fontolan -- Group Leader *Turing Centre for Living Systems (CENTURI) Institut de Neurobiologie de la Méditerranée & Centre de Physique Théorique Université Aix-Marseille, France* *https://www.inmed.fr/neural-computation-and-dynamics <https://www.inmed.fr/neural-computation-and-dynamics>* *https://centuri-livingsystems.org/l-fontolan/ <https://centuri-livingsystems.org/l-fontolan/>*

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Call for abstracts: Mathematics of Neuroscience and AI. Rome, 28-31st May 2024.
by Ruairidh McLennan Battleday Jan. 30, 2024

Jan. 30, 2024

We are delighted to announce our call for abstracts for the 5th International Convention on the Mathematics of Neuroscience and AI, to be held in Rome 28-31st May 2024. In this high-profile convention we examine computational accounts of the brain and mind from the perspectives of biocomputation, neural theory, and cognitive science. We then take findings and theory back into the creation of robust, generalizable, and scalable AI: www.neuromonster.org Keynote Speakers Professor Peter Dayan (Max Planck Institute, Tübingen) Professor Sophie Deneve (ENS, Paris) Professor Wolfgang Maass (TUG) Professor Mackenzie Mathis (EPFL) Professor Anne Collins (UC Berkeley) Dr Feryal Behbahani (Google DeepMind) Dr Giovanni Pezzulo (NRC of Italy, Rome) Session Chairs Biocomputation Yasmine Ayman (Harvard) Professor Dan Nicolau Jr (KCL) Neural theory Dr James Whittington (Stanford / Oxford) Dr Francesca Mastrogiuseppe (Champalimaud) Cognitive science Dr Ruairidh Battleday (Harvard / MIT) Dr Antonella Maselli (NRC Italy) AI Dr Ishita Dasgupta (Google DeepMind) Dr Ilia Sucholutsky (Princeton) Confirmed speakers Biocomputation Professor Andrew Adamatzky (UWE) Professor Panayiota Poirazi (FORTH, Crete) Professor Jason Shepherd (Utah) Professor Christine Grienberger (Brandeis) Neural theory Professor Rafal Bogacz (Oxford) Professor Athena Akrami (UCL) Dr Sophia Sanborn (USB / UBC) Dr Lea Duncker (Stanford) Cognitive science Professor Dagmar Sternad (Northeastern) Professor Bill Thompson (UC Berkeley) Professor Samuel McDougle (Yale) Dr Fred Callaway (NYU / Harvard) AI Professor Kevin Ellis (CMU) Professor Najoung Kim (BU, Google) Dr André Barreto (DeepMind) Dr Maria Eckstein (DeepMind) We invite submissions for each session via this Google form: https://forms.gle/u8tJU4PtkT1EKYte7 These will be accepted for poster, spotlight, or a short talk. The submission format is a single A4 sheet containing (at least) an abstract of 250 words, along with any additional material you think valuable. Submission deadline is 28th February AOE. The convention will be held at the Villa Wolkonsky, in San Giovanni, Rome (10 minutes walk from the Colosseum). A limited number of early-bird registrations have been posted on our website! Normal registration will follow after the submission deadline. We hope that you come and join us! The Organizing Committee. -- Dr Ruairidh McLennan Battleday BMBCh (Oxon) PhD Postdoctoral Research Fellow Center for Brain Science, Harvard University Center for Brains, Minds, and Machines, MIT

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PhD Position
by Ahmed El Hady Jan. 29, 2024

Jan. 29, 2024

PhD position available : Foraging tasks are emerging as crucial models for naturalistic decision making in rodents . On mechanistic level, those tasks give us the opportunity to understand how individual sensitivities to time and effort drive variability in the strategy of rodents facing an explore vs exploit dilemma. If those questions are of interest to you , there is an opening for a PhD position at the Centuri Turing Center for living systems in Marseille where the project is advised by David Robbe ( INMED, Marseille) , Eloy Christophe ( IRPHE, Marseille) and Ahmed El Hady ( Cluster for Advanced Study of Collective Behavior, Konstanz ). The project will combine theoretical and experimental approaches to understand how foraging strategies vary in terms of their sensitivities to time and effort during a variety of experimental conditions. We are looking for a candidate with a strong quantitative background, capable to developing numerical simulation/model (i.e. strong programing skills) and with a strong taste for animal behavior and cognition For more details and application procedure , please check the website : https://centuri-livingsystems.org/phd2024-19/ Please do not hesitate to get in touch in case you have any questions, Ahmed El hady Dr. Ahmed El Hady Group Leader Cluster for Advanced Study of Collective Behavior Max Planck Institute of Animal Behavior Universitätsstraße 10, 78464 Konstanz Room ZT 907 Postbox 687 Tel.: +49 7531 88-4742

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Second Call for Papers: RaPID-5@LREC-COLING 2024
by Dim X Jan. 27, 2024

Jan. 27, 2024

************************************************************************************* *Second Call for Papers:* The 5th workshop on: "*Resources and ProcessIng of linguistic, para-linguistic and extra-linguistic Data from * * people with various forms of cognitive/psychiatric/developmental impairments*" *Workshop*: co-located with LREC-COLING 2024 | Turin, Italy | May 21st, 2024 RaPID-5 serves as an interdisciplinary platform for researchers to exchange insights, methods, and experiences related to collecting and processing data from individuals with mental, cognitive, neuropsychiatric, or neurodegenerative impairments. The workshop focuses on creating, processing, and applying such data resources from individuals at different stages and severity levels of these impairments. The ultimate goal of RaPID-5 is to facilitate the study of relationships among linguistic, paralinguistic, and extra-linguistic observations, with applications ranging from aiding diagnosis to enhancing monitoring and predicting individuals at higher risk, ultimately promoting multidisciplinary collaboration across clinical, language technology, computational linguistics, and computer science communities. *Submission deadline*: Sun., 17th of March, 2024 (anywhere on earth - new date!) *Paper submission*: https://softconf.com/lrec-coling2024/rapid2024/ *Website and more details*: https://spraakbanken.gu.se/en/rapid-2024 *Contact*: Dimitrios Kokkinakis *Contact email*: dimitrios.kokkinakis(a)gu.se *Invited Speakers: * - Dr. Alexandra König, BSc MSc PhD, Institut national de recherche en informatique et en automatique (INRIA); Cobtek (Cognition; Behaviour; Technology) Lab; University Côte d'Azur, France - Prof. Maria Liakata, EPSRC/UKRI Turing Institute AI fellow, Queen Mary University of London, UK *Organizing committee*: - Kathleen C. Fraser, National Research Council, Canada; - Dimitrios Kokkinakis, University of Gothenburg, Sweden; - Kristina Lundholm Fors, Lund University, Sweden; - Charalambos K. Themistocleous, University of Oslo, Norway; - Athanasios Tsanas, The University of Edinburgh, UK; - Fredrik Öhman, University of Gothenburg and Sahlgrenska University Hospital, Sweden **************************************************************************************

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Summer school "Cognitive Foundations of Decision-Making" in Rabat, Marocco
by Rava A. da Silveira Jan. 27, 2024

Jan. 27, 2024

Applications are open for the interdisciplinary summer school “*Cognitive** Foundations of Decision-Making.”* The summer school is aimed at young scholars interested in decision-making in general, and the neural and cognitive foundations of decision-making in particular. The summer school will be held on *July 22–27, 2024*, on the beautiful campus of University Mohammed VI Polytechnic, in Rabat, Morocco. Information, including details on how to apply, can be found at https://www.rislab.net/summerschool. The lecturers will include Larbi Alaoui (Universitat Pompeu Fabra), Rava Azeredo da Silveira (ENS and University of Basel), Peter Bossaerts (University of Cambridge), Joseph Kable (University of Pennsylvania), Rafael Polania (ETH Zurich), Ryan Webb (University of Toronto).

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Call for Applications & Help Promote: Gatsby Bridging Programme (Maths Summer School)
by Lin, I-Chun Jan. 25, 2024

Jan. 25, 2024

Application deadline: 23 February 2024 (We may need to stop accepting applications before this date if the number received exceeds our capacity to review.) Programme dates: 24 Jun - 9 Aug 2024 (London, UK) Programme details: www.ucl.ac.uk/gatsby/study-and-work/gatsby-bridging-programme The Gatsby Computational Neuroscience Unit at UCL is running the Gatsby Bridging Programme - an intensive, 7-week mathematics summer school. The programme is designed for penultimate/final-year undergraduates and Master’s students (incl. recent graduates) who aspire to pursue a postgraduate research degree in Theoretical Neuroscience or Machine Learning but whose degree course does not have a strong mathematical focus. Participants will attend in-person lectures/tutorials/problem-solving sessions to develop mathematics skills and intuition necessary to enter both fields and have the opportunity to interact with our researchers. We aim to be inclusive and to increase the diversity of students entering both fields. Thus, we strongly encourage applications from students in underrepresented groups in Science, Engineering, Technology and Mathematics. A limited number of bursaries are available to students who may find it difficult to participate for financial reasons. We would also appreciate it if you could help us reach students who may benefit from this programme. Here are some ways you can help us spread the word: * Distributing the Call for Applications email among colleagues and interested students. * Sharing our posts on social media: - X/Twitter: twitter.com/GatsbyUCL/status/1747929384135127272 - Mastodon: neuromatch.social/@GatsbyUCL/111776402260388914 - LinkedIn: www.linkedin.com/posts/i-chun-lin-49270817_mathematics-summerschool-theoret… Thank you for any support you are willing to give us. If you have any questions, please don’t hesitate to get in touch. Best, I-Chun -- I-Chun Lin Scientific Programme Manager Gatsby Computational Neuroscience Unit

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CAJAL Course on Quantitative Approaches to Behavior and Virtual Reality 2024
by Daniel McNamee Jan. 24, 2024

Jan. 24, 2024

CAJAL COURSE ON QUANTITATIVE APPROACHES TO BEHAVIOR AND VIRTUAL REALITY 2 - 21 June 2024, Champalimaud Centre for the Unknown, Lisbon, Portugal https://cajal-training.org/on-site/quantitative-approaches-to-behaviour-and… Applications deadline: 19 February 2024 DIRECTORS • Benjamin de Bivort (Harvard University, USA) • Ann Kennedy (Northwestern University, USA) * Giorgio Gilestro (Imperial College London, UK) • Daniel McNamee (Champalimaud Centre for the Unknown, Portugal) Quantitative studies of behaviour are fundamental in our effort to understand brain function and malfunction. Recently, the techniques for studying behaviour, along with those for monitoring and manipulating neural activity, have progressed rapidly. Therefore, we are organizing a summer course to provide promising young scientists with a comprehensive introduction to state-of-the-art techniques in quantitative behavioural methods. This course’s content is complementary to other summer courses that focus on measuring and manipulation neurophysiological processes. Our focus is on methodologies to acquire rich data representations of behavior, dissect them statistically, model their dynamics, and integrate behavioral measurements with other kinds of neurobiological data. To this end, students will 1) fabricate devices for recording the behavior of experimental organisms (including flies, fish, and humans), 2) learn, under the guidance of the scientists developing these methods, the modern tools to analyze behavioral data from these organisms, and 3) in a week-long independent project develop and conduct a behavioral study of their own design, with the support and guidance of the course instructors and teaching assistants. The course is designed for graduate students and postdoctoral fellows from a variety of disciplines, including neuroscience, biology, ethology, computer science, and psychology. Students are expected to have a keen interest and basic background in neurobiology and behavior, as well as some programming experience. A maximum of 20 students will be accepted. Students of any nationality can apply. We specifically encourage applications from researchers who work in the developing world. Stipends are available. Confirmed faculty: Ahmed Al-Hady (Max Planck Institute, Konstanz, Germany) Kristin Branson (Janelia, USA) Andre Brown (Imperial College, UK) Bing Brunton (U Washington, USA) Iain Couzin (Max Planck Institute, Konstanz, Germany) Serena Ding (Max Planck Institute, Konstanz, Germany) Gonzalo de Polavieja (Champalimaud, Portugal) Kim Hoke (Colorado State University, USA) Karla Kaun (Brown University, USA) Kate Laskowski (UC Davis, USA) Zach Mainen (Champalimaud, Portugal) Talmo Pereira (Salk Institute, USA) Hugo Spiers (UCL, UK) Nachum Ulanovsky (Weizmann Institute, Israel) more to be confirmed! Daniel McNamee (co-director, Champalimaud Research)

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Postdoc in Barcelona
by Quian Quiroga, Rodrigo (Prof.) Jan. 24, 2024

Jan. 24, 2024

POSTDOCTORAL POSITION TO STUDY SINGLE CELL RECORDINGS AND MEMORY FUNCTIONING IN THE HUMAN BRAIN We are looking for a postdoc to study single cell recordings in humans, performed in epileptic patients for curative surgery. The position will be in the recently established group of Prof. Quian Quiroga at the Hospital del Mar Research Institute, in Barcelona (https://www.imim.es<https://www.imim.es/>). The project will investigate concept cells (a.k.a. Jennifer Aniston neurons) – neurons in the hippocampus and surrounding areas that selectively fire to specific concepts, like different pictures and the written or spoken name of a particular person (e.g. Quian Quiroga et al, Nature 2005; Quian Quiroga, Cell 2019), which are involved in declarative memory functions. For more details see: https://web.archive.org/web/20220108024112/https://www2.le.ac.uk/centres/cs…<https://web.archive.org/web/20220108024112/https:/www2.le.ac.uk/centres/csn…> The successful candidate will contribute to performing recordings with patients and the analysis / modelling of the data to investigate the role of these neurons in memory. The candidate should have very good quantitative skills (data processing and programing, e.g. in Matlab) and a strong background or interest in neuroscience. To apply send an email to Prof. Rodrigo Quian Quiroga (rquian(a)imim.es) including a CV, a letter of motivation and the name of two contacts for references. Deadline for application: Review of applications will begin on the 12th of February 2024 and will continue until the position is filled. Best, Rodrigo Quian Quiroga ICREA Research Professor Hospital del Mar Research Institute (IMIM) PRBB Building. Barcelona, Spain

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CSHL 2024 summer course on "Computational Neuroscience: Vision"
by Jonathan Pillow Jan. 24, 2024

Jan. 24, 2024

Hi All, Please consider applying to the CSHL "Computational Neuroscience: Vision" summer course. (See below for details). Applications are due March 15. Thank you! -Jonathan Pillow <https://urldefense.com/v3/__https://r20.rs6.net/tn.jsp?f=001WKqGSEgHdUGUppV…> <https://urldefense.com/v3/__https://r20.rs6.net/tn.jsp?f=001WKqGSEgHdUGUppV…> Computational Neuroscience: Vision <https://urldefense.com/v3/__https://r20.rs6.net/tn.jsp?f=001WKqGSEgHdUGUppV…> July 9 - 23, 2024 Applications Due: March 15, 2024 Instructors Emily Cooper, University of California Berkeley Jonathan Pillow, Princeton University John Serences, University of California, San Diego Hands-on Experience with - MATLAB- and Python-based computer tutorials and projects - Visual information processing from the retina to higher cortical areas - Spatial pattern analysis - Motion analysis - Neuronal coding and decoding - Attention - Decision-making 2024 Lecturers Emma Alexander, Northwestern University Mariam Aly, Columbia University Kathryn Bonnen, Indiana University EJ Chichilnisky, Stanford University Marlene Cohen, University of Chicago Rachel Denison, Boston University Lea Duncker, Stanford University Ione Fine, University of Washington Lindsey Glickfeld, Duke University Jennifer Groh, Duke University Kohitij Kar, York University Taraz Lee, University of Michigan J. Anthony Movshon, New York University Stephanie Palmer, University of Chicago Ruth Rosenholtz, M.I.T. Madineh Sedigh-Sarvestani, Cornell University Eero Simoncelli, New York University/Flatiron Institute Stefan Treue, Universität Göttingen - German Primate Center, Germany Jacob Yates, UC Berkeley For further information and to register please visit the Computational Neuroscience: Vision course website. <https://urldefense.com/v3/__https://r20.rs6.net/tn.jsp?f=001WKqGSEgHdUGUppV…>

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Announcing Okinawa/OIST Computational Neuroscience Course 2024 (OCNC 2024)
by Erik De Schutter Jan. 24, 2024

Jan. 24, 2024

OKINAWA/OIST COMPUTATIONAL NEUROSCIENCE COURSE 2024 Methods, Neurons, Networks and Behaviors June 17 to July 4, 2024 Okinawa Institute of Science and Technology Graduate University, Japan https://groups.oist.jp/ocnc The aim of the Okinawa/OIST Computational Neuroscience Course is to provide opportunities for young researchers with theoretical backgrounds to learn the latest advances in neuroscience, and for those with experimental backgrounds to have hands-on experience in computational modeling. We invite graduate students and postgraduate researchers to participate in the course, held from June 17th through July 4th, 2024 at an oceanfront seminar house of the Okinawa Institute of Science and Technology Graduate University. Applications are through the course web page (https://groups.oist.jp/ocnc) only; January 1 - January 31, 2024. Applicants will receive confirmation of acceptance end of March. Like in preceding years, the 19th OCNC will be a comprehensive three-week course covering single neurons, networks, and behaviors with ample time for student projects. The first week will focus exclusively on methods with hands-on tutorials during the afternoons, while the second and third weeks will have lectures by international and local experts. The course has a strong hands-on component based on student proposed modeling or data analysis projects, which are further refined with the help of a dedicated tutor. Applicants are required to propose their project at the time of application. There is no tuition fee. The sponsor will provide lodging and meals during the course. We hope that this course will be a good opportunity for theoretical and experimental neuroscientists to meet each other and to explore the attractive nature and culture of Okinawa, the southernmost island prefecture of Japan. Lecturers: Erik De Schutter (OIST) Kenji Doya (OIST) Tomoki Fukai (OIST) Izumi Fukunaga (OIST) N. Alex Cayco Gajic (École Normale Supérieure, Paris, France) Yukiko Goda (OIST) Arvind Kumar (KTH, Stockholm, Sweden) Bernd Kuhn (OIST) Matthew Larkum (Humboldt University, Berlin, Germany) Hakwan Lau (RIKEN CBS, Tokyo, Japan) Sukbin Lim (NYU Shangai, China) Gerald Pao (OIST) Thomas Parr (Oxford University, UK) Sam Reiter (OIST) Kazumasa Tanaka (OIST)

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Modellers Workshop for the Brain Dynamics Toolbox (Final Call)
by Stewart Heitmann Jan. 23, 2024

Jan. 23, 2024

Final call for the Modellers Workshop for the Brain Dynamics Toolbox. This is an online course is for researchers who wish to build custom dynamical models using the Brain Dynamics Toolbox software. The course focuses on practical programming techniques for the major classes of differential equations (ordinary, partial, delay, stochastic) in computational neuroscience. Example code is provided in all cases. Upon completion, students will be able to turn differential equations into working simulations. Study time is 8 hours. Course Website https://bdtoolbox.teachable.com/p/modellers-workshop Toolbox Website https://bdtoolbox.org Important Dates Enrolments close 31st Jan 2024. Disclaimer The information contained in this communication from the sender is confidential. It is intended solely for use by the recipient and others authorized to receive it. If you are not the recipient, you are hereby notified that any disclosure, copying, distribution or taking action in relation of the contents of this information is strictly prohibited and may be unlawful. This email has been scanned for viruses and malware, and may have been automatically archived by Mimecast Ltd, an innovator in Software as a Service (SaaS) for business. Providing a safer and more useful place for your human generated data. Specializing in; Security, archiving and compliance. To find out more visit the Mimecast website.

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