January 2024 - Comp-neuro - lists.cnsorg.org

CAJAL Course on Quantitative Approaches to Behavior and Virtual Reality 2024
by Daniel McNamee Jan. 24, 2024

Jan. 24, 2024

CAJAL COURSE ON QUANTITATIVE APPROACHES TO BEHAVIOR AND VIRTUAL REALITY 2 - 21 June 2024, Champalimaud Centre for the Unknown, Lisbon, Portugal https://cajal-training.org/on-site/quantitative-approaches-to-behaviour-and… Applications deadline: 19 February 2024 DIRECTORS • Benjamin de Bivort (Harvard University, USA) • Ann Kennedy (Northwestern University, USA) * Giorgio Gilestro (Imperial College London, UK) • Daniel McNamee (Champalimaud Centre for the Unknown, Portugal) Quantitative studies of behaviour are fundamental in our effort to understand brain function and malfunction. Recently, the techniques for studying behaviour, along with those for monitoring and manipulating neural activity, have progressed rapidly. Therefore, we are organizing a summer course to provide promising young scientists with a comprehensive introduction to state-of-the-art techniques in quantitative behavioural methods. This course’s content is complementary to other summer courses that focus on measuring and manipulation neurophysiological processes. Our focus is on methodologies to acquire rich data representations of behavior, dissect them statistically, model their dynamics, and integrate behavioral measurements with other kinds of neurobiological data. To this end, students will 1) fabricate devices for recording the behavior of experimental organisms (including flies, fish, and humans), 2) learn, under the guidance of the scientists developing these methods, the modern tools to analyze behavioral data from these organisms, and 3) in a week-long independent project develop and conduct a behavioral study of their own design, with the support and guidance of the course instructors and teaching assistants. The course is designed for graduate students and postdoctoral fellows from a variety of disciplines, including neuroscience, biology, ethology, computer science, and psychology. Students are expected to have a keen interest and basic background in neurobiology and behavior, as well as some programming experience. A maximum of 20 students will be accepted. Students of any nationality can apply. We specifically encourage applications from researchers who work in the developing world. Stipends are available. Confirmed faculty: Ahmed Al-Hady (Max Planck Institute, Konstanz, Germany) Kristin Branson (Janelia, USA) Andre Brown (Imperial College, UK) Bing Brunton (U Washington, USA) Iain Couzin (Max Planck Institute, Konstanz, Germany) Serena Ding (Max Planck Institute, Konstanz, Germany) Gonzalo de Polavieja (Champalimaud, Portugal) Kim Hoke (Colorado State University, USA) Karla Kaun (Brown University, USA) Kate Laskowski (UC Davis, USA) Zach Mainen (Champalimaud, Portugal) Talmo Pereira (Salk Institute, USA) Hugo Spiers (UCL, UK) Nachum Ulanovsky (Weizmann Institute, Israel) more to be confirmed! Daniel McNamee (co-director, Champalimaud Research)

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Postdoc in Barcelona
by Quian Quiroga, Rodrigo (Prof.) Jan. 24, 2024

Jan. 24, 2024

POSTDOCTORAL POSITION TO STUDY SINGLE CELL RECORDINGS AND MEMORY FUNCTIONING IN THE HUMAN BRAIN We are looking for a postdoc to study single cell recordings in humans, performed in epileptic patients for curative surgery. The position will be in the recently established group of Prof. Quian Quiroga at the Hospital del Mar Research Institute, in Barcelona (https://www.imim.es<https://www.imim.es/>). The project will investigate concept cells (a.k.a. Jennifer Aniston neurons) – neurons in the hippocampus and surrounding areas that selectively fire to specific concepts, like different pictures and the written or spoken name of a particular person (e.g. Quian Quiroga et al, Nature 2005; Quian Quiroga, Cell 2019), which are involved in declarative memory functions. For more details see: https://web.archive.org/web/20220108024112/https://www2.le.ac.uk/centres/cs…<https://web.archive.org/web/20220108024112/https:/www2.le.ac.uk/centres/csn…> The successful candidate will contribute to performing recordings with patients and the analysis / modelling of the data to investigate the role of these neurons in memory. The candidate should have very good quantitative skills (data processing and programing, e.g. in Matlab) and a strong background or interest in neuroscience. To apply send an email to Prof. Rodrigo Quian Quiroga (rquian(a)imim.es) including a CV, a letter of motivation and the name of two contacts for references. Deadline for application: Review of applications will begin on the 12th of February 2024 and will continue until the position is filled. Best, Rodrigo Quian Quiroga ICREA Research Professor Hospital del Mar Research Institute (IMIM) PRBB Building. Barcelona, Spain

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CSHL 2024 summer course on "Computational Neuroscience: Vision"
by Jonathan Pillow Jan. 24, 2024

Jan. 24, 2024

Hi All, Please consider applying to the CSHL "Computational Neuroscience: Vision" summer course. (See below for details). Applications are due March 15. Thank you! -Jonathan Pillow <https://urldefense.com/v3/__https://r20.rs6.net/tn.jsp?f=001WKqGSEgHdUGUppV…> <https://urldefense.com/v3/__https://r20.rs6.net/tn.jsp?f=001WKqGSEgHdUGUppV…> Computational Neuroscience: Vision <https://urldefense.com/v3/__https://r20.rs6.net/tn.jsp?f=001WKqGSEgHdUGUppV…> July 9 - 23, 2024 Applications Due: March 15, 2024 Instructors Emily Cooper, University of California Berkeley Jonathan Pillow, Princeton University John Serences, University of California, San Diego Hands-on Experience with - MATLAB- and Python-based computer tutorials and projects - Visual information processing from the retina to higher cortical areas - Spatial pattern analysis - Motion analysis - Neuronal coding and decoding - Attention - Decision-making 2024 Lecturers Emma Alexander, Northwestern University Mariam Aly, Columbia University Kathryn Bonnen, Indiana University EJ Chichilnisky, Stanford University Marlene Cohen, University of Chicago Rachel Denison, Boston University Lea Duncker, Stanford University Ione Fine, University of Washington Lindsey Glickfeld, Duke University Jennifer Groh, Duke University Kohitij Kar, York University Taraz Lee, University of Michigan J. Anthony Movshon, New York University Stephanie Palmer, University of Chicago Ruth Rosenholtz, M.I.T. Madineh Sedigh-Sarvestani, Cornell University Eero Simoncelli, New York University/Flatiron Institute Stefan Treue, Universität Göttingen - German Primate Center, Germany Jacob Yates, UC Berkeley For further information and to register please visit the Computational Neuroscience: Vision course website. <https://urldefense.com/v3/__https://r20.rs6.net/tn.jsp?f=001WKqGSEgHdUGUppV…>

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Announcing Okinawa/OIST Computational Neuroscience Course 2024 (OCNC 2024)
by Erik De Schutter Jan. 24, 2024

Jan. 24, 2024

OKINAWA/OIST COMPUTATIONAL NEUROSCIENCE COURSE 2024 Methods, Neurons, Networks and Behaviors June 17 to July 4, 2024 Okinawa Institute of Science and Technology Graduate University, Japan https://groups.oist.jp/ocnc The aim of the Okinawa/OIST Computational Neuroscience Course is to provide opportunities for young researchers with theoretical backgrounds to learn the latest advances in neuroscience, and for those with experimental backgrounds to have hands-on experience in computational modeling. We invite graduate students and postgraduate researchers to participate in the course, held from June 17th through July 4th, 2024 at an oceanfront seminar house of the Okinawa Institute of Science and Technology Graduate University. Applications are through the course web page (https://groups.oist.jp/ocnc) only; January 1 - January 31, 2024. Applicants will receive confirmation of acceptance end of March. Like in preceding years, the 19th OCNC will be a comprehensive three-week course covering single neurons, networks, and behaviors with ample time for student projects. The first week will focus exclusively on methods with hands-on tutorials during the afternoons, while the second and third weeks will have lectures by international and local experts. The course has a strong hands-on component based on student proposed modeling or data analysis projects, which are further refined with the help of a dedicated tutor. Applicants are required to propose their project at the time of application. There is no tuition fee. The sponsor will provide lodging and meals during the course. We hope that this course will be a good opportunity for theoretical and experimental neuroscientists to meet each other and to explore the attractive nature and culture of Okinawa, the southernmost island prefecture of Japan. Lecturers: Erik De Schutter (OIST) Kenji Doya (OIST) Tomoki Fukai (OIST) Izumi Fukunaga (OIST) N. Alex Cayco Gajic (École Normale Supérieure, Paris, France) Yukiko Goda (OIST) Arvind Kumar (KTH, Stockholm, Sweden) Bernd Kuhn (OIST) Matthew Larkum (Humboldt University, Berlin, Germany) Hakwan Lau (RIKEN CBS, Tokyo, Japan) Sukbin Lim (NYU Shangai, China) Gerald Pao (OIST) Thomas Parr (Oxford University, UK) Sam Reiter (OIST) Kazumasa Tanaka (OIST)

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Modellers Workshop for the Brain Dynamics Toolbox (Final Call)
by Stewart Heitmann Jan. 23, 2024

Jan. 23, 2024

Final call for the Modellers Workshop for the Brain Dynamics Toolbox. This is an online course is for researchers who wish to build custom dynamical models using the Brain Dynamics Toolbox software. The course focuses on practical programming techniques for the major classes of differential equations (ordinary, partial, delay, stochastic) in computational neuroscience. Example code is provided in all cases. Upon completion, students will be able to turn differential equations into working simulations. Study time is 8 hours. Course Website https://bdtoolbox.teachable.com/p/modellers-workshop Toolbox Website https://bdtoolbox.org Important Dates Enrolments close 31st Jan 2024. Disclaimer The information contained in this communication from the sender is confidential. It is intended solely for use by the recipient and others authorized to receive it. If you are not the recipient, you are hereby notified that any disclosure, copying, distribution or taking action in relation of the contents of this information is strictly prohibited and may be unlawful. This email has been scanned for viruses and malware, and may have been automatically archived by Mimecast Ltd, an innovator in Software as a Service (SaaS) for business. Providing a safer and more useful place for your human generated data. Specializing in; Security, archiving and compliance. To find out more visit the Mimecast website.

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Junior Scientists Workshop on Recent Advances in Theoretical Neuroscience, 3-7 June 2024, Trieste (Italy)
by Francesca Mastrogiuseppe Jan. 23, 2024

Jan. 23, 2024

We are delighted to announce the upcoming "Workshop on Recent Advances in Theoretical Neuroscience" taking place from June 3rd to 7th, 2024, at ICTP in Trieste, Italy. The workshop is addressed to early- and mid-career researchers, and will explore the topics of dynamics, plasticity, and computation in neural circuits. *Program overview* The program is structured around a series of in-depth morning presentations delivered by invited speakers, with an emphasis on both mathematical tools and biological implications. In the afternoons, participants will share their own research through contributed talks and poster presentations. The primary objective of this program is to foster a collaborative and prolific exchange of ideas among emerging scientists in the field of Theoretical Neuroscience. *Invited speakers* - Blake Bordelon, Harvard University, USA - Alex Cayco Gajic, Ecole Normale Superieure, France - Lea Duncker, Stanford University, USA - Rodrigo Echeveste, Universidad Nacional del Litoral, Argentina - Sukbin Lim, New York University Shanghai, China - Laureline Logiaco, MIT, USA - Marcelo Mattar, New York University, USA - Ulises Pereira, Allen Institute, USA - Alessandro Sanzeni, Bocconi University, Italy - Marine Schimel, Cambridge University, UK - James Whittington, Stanford University, USA *Venue* The workshop will be held at the ICTP Adriatico Guesthouse, a conference facility nestled beside the charming Grignano harbor, just a few minutes' walk from the iconic Miramare Castle. *Registration* There is no registration fee. Additionally, a limited number of grants are available to **fully support** the attendance of selected participants, with priority given to participants joining from the **developing countries**. ICTP can also assist with visa applications. Please note the early deadline for financial/visa support (see below). *Abstract submission* All participants are encouraged to submit an abstract summarizing their ongoing research, eligible for consideration for a poster presentation or a contributed talk. Applications can be submitted via the event website: https://indico.ictp.it/event/10481/ Application deadlines are: - February 23rd, 2024 for applicants requesting financial and/or visa support - March 15th, 2024 for all other applicants Please feel free to reach out with questions or requests. We look forward to your participation for an exciting week together! Best regards, The organizers: Agostina Palmigiano, Francesca Mastrogiuseppe, Alessandro Ingrosso, Sebastian Goldt

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EMBO Practical Course - Barcelona summer school for Advanced Modelling of Behavior (BAMB!), July 16-25, 2024
by Alexandre Hyafil Jan. 23, 2024

Jan. 23, 2024

The Barcelona summer school for Advanced Modelling of Behavior (BAMB! <http://www.bambschool.org>) teaches advanced techniques in model-based analysis of behavior (humans and other species) to cognitive and computational neuroscientists at PhD and early career levels. This will be achieved through structured lectures, talks, hands-on tutorials and group projects aimed at making knowledge obtained directly applicable to the participants' own research. We want the trainees to acquire both the conceptual basis and the technical skills that will enable them to pursue a full modelling approach on their own when they come back to their lab. The course is intended for PhD students and postdocs in cognitive, systems, and computational neuroscience with a solid background in computational/quantitative analysis to benefit maximally from the advanced training offered by the course. Proficiency in either Python or Matlab is also required. We seek a nice blend of experimentalists (cognitive psychology / neuroscience) and theoreticians (with or without experience in cognitive modeling). Scientists from underrepresented groups and countries are especially encouraged to apply. The school is an EMBO Practical Course <https://www.embo.org/conferences-training/> and is organized by the Centre de Recerca Matemática <http://www.crm.cat>. A limited number of travel grants and childcare grants will be available. Organizers: Alex Hyafil (CRM, Barcelona) Marion Rouault (CNRS, Paris Brain Institute) Heike Stein (ENS, Paris) Chris Summerfield (Oxford / Deepmind) Klaus Wimmer (CRM, Barcelona) Confirmed Faculty: Kenji Doya (OIST Okinawa) Maria Eckstein (Deepmind) Alex Hyafil (CRM, Barcelona) Jakob Macke (Tuebingen) Yael Niv (Princeton) Heike Stein (ENS, Paris) Chris Summerfield (Oxford / Deepmind) Anne Urai (Leiden) Klaus Wimmer (CRM, Barcelona) Dates and location: July 16-25, 2024, downtown Barcelona, Spain Applications are open until February 16, 2024. Please see the course website for further details: www.bambschool.org.

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Summer Workshop on the Dynamic Brain
by Eric Shea-Brown Jan. 22, 2024

Jan. 22, 2024

A warm invitation to apply to join the Summer Workshop on the Dynamic Brain. This is a computational neuroscience course, centered on student projects that leverage the wealth of Allen Institute data, particularly focused on neurophysiology, population dynamics, behavior, and connectivity data. Co-organized by the Allen Institute and the University of Washington’s Computational Neuroscience Center, the course takes place at UW’s Friday Harbor Laboratory in the San Juan Islands. This 2-week residential program is intended for researchers at the PhD student and postdoctoral level with an interest in developing the intersection of their scientific knowledge and their computational skills. While strong coding skills are not a prerequisite, there is a large emphasis on computation and coding during the course. Applications are due by February 1st, 2024. More information can be found on our Summer Workshop on the Dynamic Brain website. <https://urldefense.com/v3/__https://alleninstitute.org/events/summer-worksh…> If you have questions, please contact us at dynamicbrain(a)alleninstitute.org <mailto:dynamicbrain@alleninstitute.org>

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WCCI 2024 in Yokohama: submission deadline Jan 29
by Kenji Doya Jan. 22, 2024

Jan. 22, 2024

WCCI 2024 is a joint conference on Neural Networks, Fuzzy Systems and Evolutionary Computation. The paper submission deadline has been extended to January 29. We hope to see many of you in the waterfront city of Yokohama this summer. === IEEE WCCI 2024 Call for Papers June 30 - July 5, 2024 @ Yokohama, Japan https://2024.ieeewcci.org IEEE WCCI 2024 is the world’s largest technical event on computational intelligence, featuring the three flagship conferences of the IEEE Computational Intelligence Society (CIS) under one roof: The International Joint Conference on Neural Networks (IJCNN), the IEEE International Conference on Fuzzy Systems (FUZZ-IEEE) and the IEEE Congress on Evolutionary Computation (IEEE CEC). WCCI and IJCNN Keynote Speakers: * Marios M. Polycarpou, University of Cyprus * Bernadette Bouchon-Meunier, CNRS-Sorbonne Université * Simon See, Nvidia * Saori Tanaka, NAIST & ATR * Akira Oyama, JAXA * Johan Suykens, Katholieke Universiteit Leuven * Masashi Sugiyama, Riken & University of Tokyo * Plamen Angelov, Lancaster University * Yukie Nagai, University of Tokyo * Divyashree-Shivakumar Sreepathihalli, Google IMPORTANT DATES - 29 January 2024: Paper Submission Deadline - 15 March 2024: Paper Acceptance Notification - 1 May 2024: Final Paper Submission & Early Registration Deadline - 30 June - 5 July 2024: IEEE WCCI 2024 Yokohama, Japan PAPER SUBMISSION Please read the paper submission guidelines (https://2024.ieeewcci.org/submission) before submitting your papers. * Each paper should not reveal author's identities (double-blind review process). * Papers will be checked for plagiarism. The Program Committee reserves the right to desk-reject a paper if it contains elements that are suspected to be plagiarized. * Submissions should be original and not currently under review at another venue. * Each paper is limited to 8 pages, including figures, tables, and references. A maximum of two extra pages per paper is allowed (i.e, up to 10 pages), at an additional charge of $100 per extra page. * All papers must be submitted through the IEEE WCCI 2024 online submission system. * For special session papers, please select the respective special session title under the list of research topics in the submission system. * In order for your papers to be included in the congress program and in the proceedings, final accepted papers must be submitted, and the corresponding registration fees must be paid by May 1, 2024 (11:59 PM Anywhere on Earth). * IEEE WCCI 2024 will present the Best Overall Paper Awards and the Best Student Paper Awards to recognize outstanding papers published in each of the three conference proceedings (IJCNN 2024, FUZZ-IEEE 2024, IEEE CEC 2024). The awards will be judged by an Awards Committee and the recipient of each award will be given a certificate of the award and a cash prize. * It is the policy of WCCI 2024 that new authors cannot be added at the time of submitting final camera ready papers. Please ensure that you are following this guideline to avoid any issues with publication. * WCCI 2024 adopts EDAS as the submission system, available at the following link: https://edas.info/N31614 NOTE IEEE WCCI 2024 will be primarily an in-person conference. However, the organization acknowledges that for a wide variety of reasons not all members can physically attend the conference and that traveling may simply be impossible. Therefore, the conference will provide the possibility for remote presentation (live online talk with live online Q&A) for remote authors. At least one remote author must register for the conference (regular registration, as IEEE Member or Non-Member). In addition to delivering the live online talk, remote authors are also asked to provide a recording their talk, which will be made available to all attendees to be viewed at their own convenience. The recorded talk will also be used as a backup just in case there are Internet connection problems during the live online talk. Remote attendees can attend only online sessions whereas on-site attendees can attend all sessions (i.e., both online and on-site sessions). ---- Kenji Doya <doya(a)oist.jp> Neural Computation Unit, Okinawa Institute of Science and Technology Graduate University 1919-1 Tancha, Onna, Okinawa 904-0495, Japan Phone: +81-98-966-8594; Fax: +81-98-966-2891 https://groups.oist.jp/ncu

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3 Year Shanahan Fellowships at Allen Inst. + UW -- apply by Feb 1
by Eric Shea-Brown Jan. 21, 2024

Jan. 21, 2024

Sharing a unique and cool opportunity — the three year Shanahan Foundation Fellowships at the interface of data and neuroscience, open to early-career scholars from diverse disciplines, and co-hosted by the Allen Institute and the University of Washington’s Computational Neuroscience Center and eScience Institute in Seattle. Please head to https://alleninstitute.org/what-we-do/brain-science/careers/shanahan-founda… <https://alleninstitute.org/careers/internships-and-postbac/shanahan-foundat…>for more info and to apply to join us in Seattle, by Feb 1!

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