January 2019 - Comp-neuro - lists.cnsorg.org

Post-doctoral position Memory Dynamics Lab, Donders Institute Nijmegen
by Francesco Battaglia Jan. 21, 2019

Jan. 21, 2019

One post-doctoral position is available for a max. duration of 4 years (preferred start: first half 2019) , funded by a Dutch NWO VIDI grant to Lisa Genzel. The researcher will carry out large scale ensemble electrophysiology to research the neural basis of memory and memory consolidation. Extensive experience (e.g. at the PhD level) with ensemble recording (tetrode recording, silicon probes) and behavioral approaches would be considered a plus. The researchers will be embedded in the Memory Dynamics Lab (co-leaders, FP Battaglia and L Genzel), a rapidly growing group active in the exploration of mechanisms of memory, and will have access to large datasets from behavioral neurophysiology experiments (large scale ensemble ) from the group, currently further funded by a Marie Sklodowska Curie “M-GATE” Doctoral Network coordinated by FP Battaglia, a NWO VIDI grant to L Genzel and other public and private grants, and counting eight core members active in experimental and computational work (to be increase to 12 in 2019). To apply, please send a CV, a letter of motivation (2 page max. length) and the name and contact info for two possible referees to l.genzel(a)donders.ru.nl Applications reaching us before February, 14th 2019 will be given full consideration.

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PhD position, Computational models of task dependent object-based visual attention
by Obermayer, Klaus, Prof. Dr. Jan. 21, 2019

Jan. 21, 2019

Dear moderator, would you be so kind to post the job offer below on the mailing list? Thank you very much! Best regards Klaus Obermayer ------------------------------------------------------------------------------------------------------------------------------- Research Assistant (PhD position) Neural Information Processing Group Technische Universität Berlin Berlin, Germany Computational models of task dependent object-based visual attention Salary level: TV-L 13 (100%) Duration: 3 years Starting date: October 1st, 2019 Application deadline: February 15th, 2019 Working field The successful candidate will explore the hypothesis that object-level attentional units are essential mid-level factors which guide human eye-movements in visual scene analysis. Based on eye-fixation data from visual search tasks she/he will first build computational models to emulate the measured fixation sequences, to quantify the influence of different low- and high-level visual features, and to characterize the influence of task-driven changes in object-based attention processes. In a second step, plausible models will be integrated as "attentional modules" into a computer vision system for visual scene analysis and will be evaluated in terms of task success and the number of computations involved. Potential achievement of the project is an efficient real-time analysis of dynamic visual scenes. The position is part of the new DFG-funded cross-disciplinary research Cluster "Science of Intelligence" (http://www.scienceofintelligence.de/) The successful candidate will be enrolled in the Cluster's doctoral program and is expected to actively engage in the Cluster's educational and research activities. Qualifications Applicants must hold a Master degree in Computational Neuroscience, Computer Science, Physics, Mathematics, or related fields. Applicants should have very good programming skills, a very good command of the English language, a solid mathematical background, competence in machine learning, and a strong interest in visual perception. How to apply: Please upload your application via the link www.scienceofintelligence.de/call-for-applications/open-positions/doctoral-…) and follow instructions. Applications should include: motivation letter, curriculum vitae, transcripts of records (for both BSc and MSc), copies of degree certificates (BSc, MSc), abstracts of Bachelor-, Master-thesis, list of publications and one selected manuscript (if applicable), two names of qualified persons who are willing to provide references, and any documents you feel may help us assess your competence.

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Meeting announcement: UK Neural Computation conference, July 1st-3rd
by Mark Humphries Jan. 18, 2019

Jan. 18, 2019

Save the date! We are pleased to announce the UK Neural Computation conference, July 1st-3rd 2019, at the University of Nottingham A national meeting for the UK community working on the computational side of neuroscience. Be it modelling, maths, data science, theory, machine-learning, and all combinations thereof. Schedule: July 1st: ECR tutorials and seminars July 2nd-3rd: main meeting Confirmed speakers for the main meeting: Athena Akrami (SWC) Andy Barron (Macquarie) Tim Behrens (Oxford) Claudia Clopath (Imperial) Matthias Hennig (Edinburgh) Cian O'Donnell (Bristol) Chris Summerfield (Oxford) Tim Vogels (Oxford) Barbara Webb (Edinburgh) For further details, see the website: https://drmdhumphries.wixsite.com/ukneuralcomp2019 And look out for the abstract submission and registration announcement, coming soon. Hope to see you there! Mark Humphries (Chair, Nottingham) Hannes Saal (Sheffield) Robert Schmidt (Sheffield) Stuart Wilson (Sheffield) This message and any attachment are intended solely for the addressee and may contain confidential information. If you have received this message in error, please contact the sender and delete the email and attachment. Any views or opinions expressed by the author of this email do not necessarily reflect the views of the University of Nottingham. Email communications with the University of Nottingham may be monitored where permitted by law.

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NIH funded postdocs: systems neuroscience of visual perception and attention
by Haider, Bilal Jan. 18, 2019

Jan. 18, 2019

NIH Funded postdoctoral positions: Synaptic and network mechanisms controlling visual perception The Haider Lab<file:///C:/Users/bhaider6/Dropbox/Docs/GTech%20Docs/Hiring/haider.gatech.edu> in the Dept. of Biomedical Engineering (BME) at Georgia Tech & Emory University seeks 2 highly motivated and skilled postdoctoral fellows for 3-5 year NIH BRAIN funded projects examining synaptic and network mechanisms supporting sensory perception and visual attention. Recent lab publications can be found here: http://haider.gatech.edu/publications/ The projects offer significant opportunity to learn cutting-edge research techniques in vivo, including 1) neural population recording with high-density silicon electrodes (Neuropixels), 2) optogenetic circuit manipulation, and 3) whole-cell patch-clamp recording during behavior. The ideal candidate has expertise in patch clamp or multi-electrode electrophysiology in vitro or in vivo, and quantitative skill in data acquisition and analysis (preferably with MATLAB). Candidates should have excellent written and verbal communication skills, an inquisitive mindset, and enthusiasm to work in a multi-disciplinary team. The position is funded for up to 5 years, pending satisfactory performance upon annual review. We are enthusiastic to form a diverse, international research group. All candidates will be mentored for independent career development. There is a strong, multidisciplinary concentration of labs focusing on Neuroscience @ GT<http://neuro.gatech.edu/> and at Emory<http://biomed.emory.edu/PROGRAM_SITES/NS/>. Atlanta is vibrant, green, and one of the most affordable and livable major cities of the US. Applications should include a CV, a brief statement of research goals, expected date of availability, and names and contact information of three references. Please email these materials to bilal.haider(a)bme.gatech.edu<mailto:bilal.haider@bme.gatech.edu> The Wallace H. Coulter Dept. of Biomedical Engineering<https://www.bme.gatech.edu/> at Georgia Tech and Emory University is an equal opportunity employer committed to diversity. The Department is a unique enterprise, spanning two of the top Engineering and Medical institutes in the country. This environment offers unparalleled facilities and resources for the pursuit of understanding neural circuits and their relationship to behavior and neurological dysfunction. Further information and recent lab publications can be found at haider.gatech.edu<file:///C:/Users/bilal/Dropbox/Docs/GTech%20Docs/haider.gatech.edu> Bilal Haider, Ph.D. Assistant Professor Coulter Dept. of Biomedical Engineering Georgia Tech & Emory University 313 Ferst Drive, Suite 3104 Atlanta, GA 30332 tel: +1 404 385 4935 fax: +1 404 385 5044 site: haider.gatech.edu<http://haider.gatech.edu/> twitter: @haiderlab<https://twitter.com/haiderlab>

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Postdoctoral position at Caltech
by Kennedy, Ann Jan. 18, 2019

Jan. 18, 2019

Hello comp-neuro, posting this on behalf of David Anderson: The laboratory of David J. Anderson is seeking highly motivated postdoctoral researchers from computational backgrounds, for work in analysis and modeling the neural control of complex naturalistic behaviors. The position offers a unique opportunity for theorists to be immersed in a lab environment, collaborating with experimentalists to design and analyze microendoscopic imaging and functional perturbation experiments targeting the dynamics of subcortical nuclei governing social and fear behaviors in mice. Potential computational/theory projects include joint latent variable models of neural activity and behavior, analysis of automated pose estimation data in pairs of interacting mice, and modeling decision-making processes among heterogeneous neural populations. The ideal candidate has expertise in statistical modeling, engineering, or physics, has excellent written and oral communication skills, and is enthusiastic about working closely with experimentalists to understand biological problems. David Anderson is the Director of the TianQiao and Chrissy Chen Institute for Neuroscience at Caltech, a strong, interdisciplinary neuroscience program. A new, dedicated building for the Institute is under construction, and the Institute is actively recruiting new theory faculty as well as computationally minded students. Applications should include a CV, a brief statement of research interests, expected date of availability, and contact information of three references, and should be sent to mancusog(a)caltech.edu<mailto:mancusog@caltech.edu>, cc'ing wuwei(a)caltech.edu<mailto:wuwei@caltech.edu> and kennedya(a)caltech.edu<mailto:kennedya@caltech.edu> Further information about the Anderson lab can be found at https://davidandersonlab.caltech.edu<https://davidandersonlab.caltech.edu/> -- Ann Kennedy Postdoctoral Researcher California Institute of Technology

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Submissions now open: XI. Dubrovnik Conference on Cognitive Science - Computational Rationality
by Gergo Orban Jan. 17, 2019

Jan. 17, 2019

Dear all, This is a reminder that submissions are now open for the XI. Dubrovnik Conference on Cognitive Science, which is devoted to the topic of Computational Rationality. The conference will take place between 23-25 May 2019 in Dubrovnik, Croatia. We invite poster submissions from all areas of cognitive science. You may submit your poster abstract here: http://www.cecog.eu/ducog/page_submission.php <http://www.cecog.eu/ducog/page_submission.php> Our invited speakers are: Ulrike Hahn (Birkbeck, University of London, UK) Quentin Huys (Max Planck UCL Centre for Computational Psychiatry and Ageing Research, London, UK) Julian Jara-Ettinger (Yale University, USA) Máté Lengyel (University of Cambridge, UK, and Central European University, Hungary) Azzurra Ruggeri (Max Planck Institute for Human Development, Berlin, Germany) Laura Schulz (MIT, USA) Deadline for poster abstract submission is 28 February 2019. Authors will be notified of acceptance of their abstracts by 15 March 2019. For more information please visit: http://www.cecog.eu/ducog/page_invitation.php <http://www.cecog.eu/ducog/page_invitation.php> Or email us: ducog(a)cogsci.bme.hu <mailto:ducog@cogsci.bme.hu> On behalf of the organisers, Oana Stanciu Gergő Orbán Programme chairs

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Postdoctoral Positions in the Rinberg and Shoham labs
by Dmitry Rinberg Jan. 17, 2019

Jan. 17, 2019

The Rinberg and Shoham labs at NYU Medical School are seeking to fill multiple postdoctoral positions at the interface of computational systems neuroscience and advanced neurotechnology. We study how olfactory and visual information is represented and processed in neural activity patterns, and how the brain extracts information relevant for behavior. The postdoctoral researches will be involved in joint- and individual-lab projects as members of NYU’s vibrant world-class hub for computational systems neuroscience, of NYU Tech4Health, a new biomedical technology development institute, and of an international collaboration network. Our labs employ modern techniques including one- and two-photon imaging and patterned optogenetics, Si-probe electrophysiology, and psychophysics approaches to systematically explore the behavioral readout of spatiotemporal neuronal codes in behaving animals. Different projects tackle this challenge using either cellular-resolution (multiphoton) or large-scale (mesoscopic) tools, in combination with advanced statistical analyses and theoretical modeling. In addition to conventional tools, we are developing new cutting-edge tools for bidirectional high-precision probing and monitoring of information processing in behaving animals, and for potential applications: the Rinberg lab is developing a bio-electronic nose - a universal, versatile, and very sensitive chemical detector based on the mouse olfactory system. The Shoham lab is working towards holography-based solutions for vision restoration. This is an excellent opportunity for computationally and technologically inclined candidates to find their niche in-between developing cutting edge technologies and applying the technologies to fundamental scientific questions. An ideal candidate should have a background in neuroscience, physics/engineering and math. Knowledge and experience in optics, imaging, multi-neuron physiology and computational methods are a big plus. Please contact Dima Rinberg: rinberg(a)nyu.edu <mailto:rinberg@nyu.edu> or Shy Shoham: shoham(a)nyu.edu <mailto:shoham@nyu.edu>. See also: www.rinberglab.com <https://urldefense.proofpoint.com/v2/url?u=http-3A__www.rinberglab.com_&d=D…>, niel.net.technion.ac.il <https://urldefense.proofpoint.com/v2/url?u=http-3A__niel.net.technion.ac.il…>

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PostDoc positions (HSE, Russian Federation)
by Victoria Moiseeva Jan. 17, 2019

Jan. 17, 2019

A series of POSTDOCTORAL positions are available at the Institute of Cognitive Neuroscience (ICN) in Moscow (https://neuro.hse.ru/en/)https://neuro.hse.ru/en/) ICN is a dynamic and ambitious research institute with a growing international reputation of a and state-of-the-art equipment. Postdoctoral positions are available across the following research groups: · Center for Bioelectric Interfaces · The Theoretical Neuroscience Group (TNG) · The Neurodynamics Group · The Cognitive Control, Communication and Perception Group · The Neuroeconomics Group · Memory and Motor Control Group We are equipped with the modern research equipment including EEG, MEG, fMRI, nTMS, and eye trackers. The ICN is based at the Higher School of Economics (HSE) - a modern, international and rapidly developing research-intensive university in Moscow, which invests heavily in both fundamental and applied research. Jobs description, requirements and application details are available at the https://neuro.hse.ru/en/vacancies We offer competitive salaries. Please refer to the general conditions for Post-Doctoral Research positions at the https://iri.hse.ru/faq_pdhttps://iri.hse.ru/faq_pd Application deadline is February 15, 2019 A CV and research statement should be submitted via online application portal. Two letters of recommendation should be submitted by the referees directly to fellowship(a)hse.ru<mailto:fellowship@hse.ru>. Please note that direct applications to the hiring Laboratory will not be reviewed. For informal enquires please contact individual group leader (contact details to be found on the website)

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Postdoc/programmer position at the Okinawa Institute of Science and Technology
by Erik De Schutter Jan. 17, 2019

Jan. 17, 2019

The Computational Neuroscience unit (https://groups.oist.jp/cnu) at the Okinawa Institute of Science and Technology, Japan has an opening for a postdoctoral researcher or technician in software development and computational modeling of stochastic neuronal reaction-diffusion processes and 3D modeling of neurons at the submicron level. Initial duration is two years with an option to extend. The hired postdoctoral researcher or technician is expected to make valuable contributions to the STEPS project (http://steps.sourceforge.net) in two ways: 1) by researching molecular neuronal processes and designing novel techniques and routines for accurate computational modeling of such systems, and 2) contributing to realistic applications of the new techniques in biological modeling studies. In performing these tasks, the candidate is expected to contribute to publications that are either based on theory and computational techniques, or geared more towards answering real biological questions through computational modeling. As such the ideal candidate will have a scientific background but also possess good programming skills. There will be many opportunities to interact with other STEPS developers in our lab and also other researchers working on related cerebellar projects, and also to collaborate on STEPS development with the Blue Brain Project, EPFL, Geneva. Competences: For the postdoctoral position a recent PhD is required in a relevant discipline such as neuroscience, molecular biology, biophysics, biochemistry, and for a technician a masters degree is required in a similar discipline or computer science. For either position, we require a talented programmer with experience in C++ and Python. In satisfying these criteria, it is expected that the candidate has some experience of modeling neuronal or other biological processes computationally, but this is not essential if the candidate has a strong enough interest in moving into the field. Fluent English conversation and writing skills are required. Benefits / Offer: A competitive salary and relocation package are offered. This an ideal position to gain experience in a prominent computational neuroscience lab. Contributions of technicians are honored by authorship on relevant publications. Please contact Prof. Erik De Schutter (erik(a)oist.jp) for inquiries.

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BindsNET - A Machine Learning Spiking Neural Networks Library in Python
by Hananel Hazan Jan. 17, 2019

Jan. 17, 2019

[Apologies for cross-postings] Dear colleagues, It is our pleasure to introduce the release of the python package BindsNET <https://github.com/Hananel-Hazan/bindsnet>and its companion paper in Frontiers in Bioinformatics “BindsNET: A Machine Learning-Oriented Spiking Neural Networks Library in Python <http://journal.frontiersin.org/article/10.3389/fninf.2018.00089>”. BindsNET is a python package to simulate a spiking neuronal network using a GPU. The framework is easy and well in line with Python, NumPy and PyTorch standard that runs on CPU’s/GPU’s. BindsNet will serve both the novel researcher and the seasoned programmer wanting to perform rapid prototyping prior to diving into hardware implementation. To achieve maximum performance and flexibility, BindsNET re-purposes the powerful and flexible PyTorch <http://pytorch.org/> library. By wrapping around PyTorch we avoid "reinventing the wheel" by reusing it's function and sub-modules for the spiking neuronal networks computational needs. For more details on performance, usability and code examples please see the Frontier paper <http://journal.frontiersin.org/article/10.3389/fninf.2018.00089> as well in the GitHub repository <https://github.com/Hananel-Hazan/bindsnet>. BindsNet welcomes researcher, students and neuro-scientists to both utilize and contribute to this leading-edge toolbox. *Happy spiking* Thanks Hananel Hazan Postdoctoral Research Associate BINDS Lab, UMass Amherst, USA http://Hananel.Hazan.org.il

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