October 2018 - Comp-neuro - lists.cnsorg.org

Tenure Track Job at Emory University in Neural Circuit Mechanisms of Behavior
by Jaeger, Dieter 19 Oct '18

19 Oct '18

The Department of Biology in the Emory College of Arts and Science in Atlanta, GA, USA, is seeking applications for a tenure-track faculty position at the assistant or associate professor level in experimental and computational neuroscience. A strong computational neuroscience group at Emory is anchored in the Department of Biology (http://www.biology.emory.edu) and is grounded in experimental preparations and neurobiological questions about the mechanisms underlying behavior and learning. We anticipate a hire focused on innovative approaches to understanding the function of brain circuits in a behavioral context. Such approaches may include optogenetics, cellular imaging, high-density electrophysiology, network simulations, or other cutting-edge neuroscientific methods. The ability to link theory and data analysis to experimental design in order to develop more predictive models of neural activity and behavior is critical. The successful candidate is anticipated to have a PhD in a relevant science or engineering field and postdoctoral experience in neuroscience-related research, and is expected to contribute to the Biology Department's teaching mission in the context of programs in quantitative theory and methods (http://quantitative.emory.edu) and neuroscience and behavioral biology (http://www.nbb.emory.edu) Interactions with experimentalists and theorists within Emory's rich, collaborative neuroscience community are encouraged. Emory has more than 100 laboratories participating in graduate programs in Neuroscience (http://biomed.emory.edu/PROGRAM_SITES/NS/) and Biomedical Engineering (http://www.bme.emory.edu) and spanning Emory College (Biology, Psychology, Physics, Anthropology), School of Medicine, Yerkes National Primate Research Center and Georgia Institute of Technology. Emory College's Theory and Modeling of Living Systems initiative (http://livingtheory.emory.edu/) provides a broader community for interaction with theorists in the life science. Applications should include a cover letter, curriculum vitae, a research statement, a teaching statement and three reference letters. In a separate statement or in the cover letter, we also ask candidates to reflect on their efforts in mentoring and teaching students from diverse backgrounds. Applications and reference letters must be electronically uploaded through Interfolio at http://apply.interfolio.com/53691. Review of applications will begin Dec. 1, 2018. Applications received up to 30 days after, or until the positions are filled, will be given consideration. Emory University is an equal employment opportunity and affirmative action employer. Women, minorities, people with disabilities and veterans are strongly encouraged to apply. Also - one or more members of the search committee will be available for brief (10-minute) informational meetings with potential candidates during the SfN conference in San Diego in November. Please contact Sam Sober at ssober(a)emory.edu<mailto:ssober@emory.edu>. Potential candidates do not need to have submitted an application to have one of these meetings, which are intended to help applicants learn about the position, department, and neuro community at Emory. Dieter Jaeger, PhD Professor Department of Biology, Emory University 1510 Clifton Rd., Atlanta, GA 30322 404 727 8139, e-mail: djaeger(a)emory.edu<mailto:djaeger@emory.edu> http://www.biology.emory.edu/research/Jaeger ________________________________ This e-mail message (including any attachments) is for the sole use of the intended recipient(s) and may contain confidential and privileged information. If the reader of this message is not the intended recipient, you are hereby notified that any dissemination, distribution or copying of this message (including any attachments) is strictly prohibited. If you have received this message in error, please contact the sender by reply e-mail message and destroy all copies of the original message (including attachments).

1 0

PhD fellowships in computational neuroscience at the FMI in Basel, Switzerland
by Friedemann Zenke 19 Oct '18

19 Oct '18

The FMI PhD program now welcomes applications in computational neuroscience. Submission deadline is the 16th of November 2018. The FMI PhD program offers students the opportunity to carry out cutting-edge research in a stimulating, highly international and collaborative atmosphere. Affiliated with the Novartis Institutes for BioMedical Research and the University of Basel in Switzerland, the FMI provides interdisciplinary training and access to state-of-the-art technology platforms and high-performance computing facilities. Several research groups at the FMI offer exciting PhD projects for students with a computational background. PhD students whose primary interest is in computational neuroscience, will be able to join a new group led by Friedemann Zenke which focuses on memory formation and information processing in biologically inspired neural network models. Students will have the opportunity to directly collaborate with experimental groups in system neuroscience at the FMI (https://www.fmi.ch/Research/Neurobiology/) A wide range of theoretical and practical courses are available at both the FMI and the University of Basel. After completion of their thesis work, students are awarded a PhD from the University of Basel. Candidates should be curious about the neural underpinnings of computation and learning, have a strong analytical and quantitative background, and hold a relevant first degree in, for instance, computer science, engineering, mathematics, neuroscience, physics, psychology, or statistics. Funding is available regardless of current residence and nationality. Applications should be submitted online via https://www.fmi.ch/training/phd/apply/ Additional information PhD program: https://www.fmi.ch/training/PhD/ Zenke group (from 2019): https://www.fmi.ch/research/groupleader/zenke.html Neurobiology groups: https://www.fmi.ch/Research/Neurobiology/ For questions, please contact Elida Keller (fmiphdprogram(a)fmi.ch) -- Friedemann Zenke, PhD Sir Henry Wellcome Fellow Centre for Neural Circuits and Behaviour University of Oxford Tinsley Building Mansfield Road Oxford OX1 3SR United Kingdom https://fzenke.net

1 0

CFP: FLAIRS 2017, Marco Island, FL,
by bisant＠umbc.edu 18 Oct '18

18 Oct '18

CALL FOR PAPERS FLAIRS 2017, Florida Artificial Intelligence Research Symposium Special Tracks on Data mining and Special Track on Cyber Security Marco Island, Florida http://www.flairs-30.info/ Paper submission deadline: November 21, 2016. Notifications: January 23, 2017. Camera ready version due: February 27, 2017. FLAIRS is an interdisciplinary artificial intelligence conference which especially encourages novel ideas and which features a double-blind review process. Data Mining Track This special track will be devoted to data mining with the aim of presenting new and important contributions in this area. Papers and contributions are encouraged for any work related to Data Mining. Topics of interest may include (but are in no way limited to): 1. Applications such as Intelligence analysis, medical and health applications, text, video, and multi-media mining, E-commerce and web data, financial data analysis, cyber security, remote sensing, earth sciences, bioinformatics, and astronomy. 2. Modeling algorithms such as hidden Markov models, decision trees, neural networks, statistical methods, or probabilistic methods; case studies in areas of application, or over different algorithms and approaches. 3. Feature extraction and selection. 4. Post-processing techniques such as visualization, summarization, or trending. 5. Preprocessing and data reduction. 6. Knowledge engineering or warehousing. Papers dealing with Cloud-based unstructured data or Cloud-based tool suites, such as Mahout or Apache Spark, are also encouraged. Cyber-Security Track Original high quality papers are sought for leading edge research and applications relating to the application of AI and Cyber Security. Topics of interest may include but are not limited to: · Machine Learning for Intrusion Detection Systems · NLP for text analysis in Cyber Security · Video and CCTV semantic analysis for terrorist or criminal action detection · AI & Biometrics, Internet of Things, and Cloud Computing security · AI & SCADA systems, Network Systems, and Embedded Systems security · Formal and theoretical approaches of intelligent security in WSNs · Legal and policy issues in intelligent security · Integrity, privacy, authentication and access control · Intelligent secure systems in multimedia databases · Social networks security · Intelligent incident response techniques in network and communication systems · Risk analysis and intelligent management · Virtual Private Networks intelligent security · Automated reasoning techniques of incidents and evidence analysis · Evidentiary aspects of digital forensics · Collaborative intelligent investigation · Intelligent systems in management, storage and reassembly · Steganography, watermarking, and forensic techniques in multimedia content processing · Lightweight security techniques · Intelligent Large-scale investigations and Big Data · Innovative non-repudiation techniques · Intelligent vulnerability analysis and assessment · Attacks tracking · Data hiding, tamper detection and recovery techniques · Security of e- healthcare systems and applications Note: We invite original papers (i.e. work not previously submitted, in submission, or to be submitted to another conference during the reviewing process). Submission Guidelines Interested authors should format their papers according to AAAI formatting guidelines. The papers should be original work (i.e., not submitted, in submission, or submitted to another conference while in review). Papers should not exceed 6 pages (or 4 pages for short paper, to be presented as a poster) and are due by November 21, 2016. For FLAIRS-30, the 2017 conference, the reviewing is a double blind process. Author names and affiliations should be Xd out on submitted papers to provide double-blind reviewing. Papers must be submitted as PDF through the EasyChair conference system, which can be accessed through the main conference web site (http://www.flairs-30.info/) Note: do not use a fake name for your EasyChair login - your EasyChair account information is hidden from reviewers. Authors should indicate which special track they are submitting to. The proceedings of FLAIRS will be published by the AAAI. Authors of accepted papers will be required to sign a form transferring copyright of their contribution to AAAI. FLAIRS requires that there be at least one full author registration per paper.

2 1

CFP: TAC | Special Issue on Automated Perception of Human Affect from Longitudinal Behavioral Data
by Pablo Barros 18 Oct '18

18 Oct '18

CALL FOR PAPERS IEEE Transactions on Affective Computing Special Issue on Automated Perception of Human Affect from Longitudinal Behavioral Data Website: https://www2.informatik.uni-hamburg.de/wtm/omgchallenges/tacSpecialIssue201… I. Aim and Scope Research trends within artificial intelligence and cognitive sciences are still heavily based on computational models that attempt to imitate human perception in various behavior categorization tasks. However, most of the research in the field focuses on instantaneous categorization and interpretation of human affect, such as the inference of six basic emotions from face images, and/or affective dimensions (valence-arousal), stress and engagement from multi-modal (e.g., video, audio, and autonomic physiology) data. This diverges from the developmental aspect of emotional behavior perception and learning, where human behavior and expressions of affect evolve and change over time. Moreover, these changes are present not only in the temporal domain but also within different populations and more importantly, within each individual. This calls for a new perspective when designing computational models for analysis and interpretation of human affective behaviors: the computational models that can timely and efficiently adapt to different contexts and individuals over time, and also incorporate existing neurophysiological and psychological findings (prior knowledge). Thus, the long-term goal is to create life-long personalized learning and inference systems for analysis and perception of human affective behaviors. Such systems would benefit from long-term contextual information (including demographic and social aspects) as well as individual characteristics. This, in turn, would allow building intelligent agents (such as mobile and robot technologies) capable of adapting their behavior in a continuous and on-line manner to the target contexts and individuals. This special issue aims at contributions from computational neuroscience and psychology, artificial intelligence, machine learning, and affective computing, challenging and expanding current research on interpretation and estimation of human affective behavior from longitudinal behavioral data, i.e., single or multiple modalities captured over extended periods of time allowing efficient profiling of target behaviors and their inference in terms of affect and other socio-cognitive dimensions. We invite contributions focusing on both the theoretical and modeling perspective, as well as applications ranging from human-human, human-computer and human-robot interactions. II. Potential Topics Given computational models, the capability to perceive and understand emotion behavior is an important and popular research topic. That is why recent special issues on the IEEE Journal on Transactions on Affective Computing covered topics from emotion behavior analysis “in-the-wild” to personality analysis. However, most of the research published by these specific calls treat emotion behavior as an instantaneous event, relating mostly to emotion recognition, and thus neglect the development of complex emotion behavior models. Our special issue will foster the development of the field by focusing excellent research on emotion models for long-term behavior analysis. The topics of interest for this special issue include, but are not limited to: - New theories and findings on continuous emotion recognition - Multi- and Cross-modal emotion perception and interpretation - Lifelong affect analysis, perception, and interpretation - Novel neural network models for affective processing - New neuroscientific and psychological findings on continuous emotion representation - Embodied artificial agents for empathy and emotion appraisal - Machine learning for affect-driven interventions - Socially intelligent human-robot interaction - Personalized systems for human affect recognition III. Submission Prospective authors are invited to submit their manuscripts electronically, adhering to the IEEE Transactions on Affective Computing guidelines ( https://ieeexplore.ieee.org/xpl/RecentIssue.jsp?punumber=5165369) Please submit your papers through the online system ( https://mc.manuscriptcentral.com/taffc-cs) and be sure to select the special issue: Special Issue/Section on Automated Perception of Human Affect from Longitudinal Behavioral Data. IV. IMPORTANT DATES: Submissions Deadline: 15th of January 2019 Deadline for reviews and response to authors: 06th of April 2019 Camera-ready deadline: 05th of August 2019 V. Guest Editors Pablo Barros, University of Hamburg, Germany Stefan Wermter, University of Hamburg, Germany Ognjen (Oggi) Rudovic, Massachusetts Institute of Technology, United States of America Hatice Gunes, University of Cambridge, United Kingdom -------------------------- -- Dr. Pablo Barros Postdoctoral Research Associate - Crossmodal Learning Project (CML) Knowledge Technology Department of Informatics University of Hamburg Vogt-Koelln-Str. 30 22527 Hamburg, Germany Phone: +49 40 42883 2535 Fax: +49 40 42883 2515 barros at informatik.uni-hamburg.dehttp://www.pablobarros.nethttps://www.inf.uni-hamburg.de/en/inst/ab/wtm/people/barros.htmlhttps://www.inf.uni-hamburg.de/en/inst/ab/wtm/

1 0

NEURON course at SFN 2018 meeting
by Ted Carnevale 16 Oct '18

16 Oct '18

A few seats remain open for the NEURON course that we will be presenting at the SFN 2018 meeting in San Diego. However, the registration deadline is Friday, October 19--just three days from today, so you'll have to act quickly if you are interested in learning things like * why you should be using NEURON to model biological neurons and neural circuits * how to get started building models with NEURON's GUI and/or Python * advanced tips for getting the most out of using Python as NEURON's interpreter, and using NEURON's GUI for interactive modeling and debugging of models implemented with Python * using the Import3d tool to convert Neurolucida, Eutectic, and SWC morphometric data files to NEURON models * how to add new ion channels and other biophysical mechanisms to NEURON For the course description and registrion form, see https://neuron.yale.edu/neuron/static/courses/sd2018/sd2018.html --Ted This message was composed in plain text and may contain plain text formatting of source code, tables, and lists. Reading it in a client that ignores "excess" whitespace characters or line breaks may destroy that formatting, making this message unreadable. Outlook does that by default; learn how to disable the "Auto Remove Line Breaks" ""feature"" at support.microsoft.com

1 0

Postdoctoral position in circuit modelling at Nottingham, deadline 7th November
by Mark Humphries 16 Oct '18

16 Oct '18

A postdoctoral position is available in the lab of Prof Mark Humphries at the University of Nottingham. We seek a postdoctoral researcher to tackle the deep question of how dopamine controls the dynamics of the striatum. As the main target of dopamine in the brain, the striatum bears the brunt of dopamine loss in Parkinson’s disease. Yet how dopamine controls the output of the striatum, and how the loss of dopamine disrupts that output, is unknown. The successful candidate will be responsible for constructing and simulating models of the striatum to investigate how dopamine controls the striatum’s dynamics, and the implications this will have for Parkinson’s disease. The project will build upon the detailed models of the striatum from the Humphries group (e.g. Humphries et al 2009 Neural Networks; 2010, PLoS Computational Biology). This is also a chance to join the newly-created computational neuroscience centre at Nottingham, which includes Profs Mark van Rossum and Stephen Coombes. Find out more about the lab and its interests here: https://www.humphries-lab.org/ The post will be available for 18 months in the first instance. More details, eligibility, and application instructions here: https://www.nottingham.ac.uk/jobs/currentvacancies/ref/SCI353818 Deadline: 7th November 2018 To discuss this or other projects, please contact Mark (mark.humphries(a)nottingham.ac.uk)

1 0

Fully-funded PhD in computational neuroscience at Nottingham, deadline 31st October
by Mark Humphries 16 Oct '18

16 Oct '18

A fully funded PhD position in Computational Neuroscience is available with Prof. Mark Humphries at the School of Psychology, University of Nottingham. Deadline: October 31st Full details and to apply: https://www.nottingham.ac.uk/psychology/news/funded-phd-opportunity-prof-ma… The Humphries’ lab interrogates how the joint activity of many neurons encodes the past, present, and future, in order to guide behaviour. We combine simulations of neural circuits with “neural data science” – the development and use of machine-learning approaches to systems neuroscience data. We are particularly interested in PhD projects on the following research questions: * “Mapping the wires from neural activity”. How to use the next generation of imaging techniques that directly record neuron voltages to accurately infer the wiring between neurons. * “How to write activity into neurons". What features of neural activity should we change with optogenetics in order to test hypotheses about population activity? * “Dynamic control of the striatum in health and disease”. How the influence of the striatal interneurons is controlled by dopamine, and how that influence goes haywire when dopamine is lost in Parkinson’s disease. For a primer on our research, and our recent publications, visit our lab website: /https://www.humphries-lab.org/ To discuss these or other projects, please contact Prof Mark Humphries (mark.humphries(a)nottingham.ac.uk)

1 0

Master-PhD studentship:Studying the physiological synergy of different ion channels in neurons
by luiza filipis 16 Oct '18

16 Oct '18

M2 stage (April – July 2019) and possibility to continue with a 3-years PhD, starting in October 2019, with scholarship already granted Studying the physiological synergy of different ion channels in neurons Following the recent award of a competitive National grant, we are looking for a brilliant and motivated undergraduate student, with biological and/or physical background, to perform a final stage at the last University level (Master-2 or equivalent), starting April 1st 2019 or earlier if possible and ending in July 2019. The student will receive a stipend of ~500€/month for the entire duration of the stage. The objective of the project is to combine advanced imaging techniques applied to neurons in brain slices, novel photoactivable toxins to target individual ion channels and advanced computational techniques to extract the precise activity of multiple ion channels underlying neuronal signals. The student will learn patch clamp and imaging techniques and apply those to test novel photoactivable toxins targeting calcium channels. At the end of the stage, if positively evaluated, a 3-year PhD with an already available scholarship from the labex consortium ICST (http://www.labex-icst.fr/en) will be offered to start on October 1st 2019. The criteria for selecting the students will include (in order of importance) - The academic record of the student (notes) with respect to the disciplines associated with the project. (For students coming from French Universities, an average note of >13/20 in the M1 and in the first semester of M2 is compulsory to be considered). - Motivation to carry on a career in scientific research as the following PhD opens the gate to further postdoctoral experiences outside France. - Personal attitude to laboratory life including relationships with colleagues. Applications, addressed to Dr Marco Canepari ( marco.canepari(a)univ-grenoble-alpes.fr) should contain: 1. a CV based on the academic record including notes (at least the most relevant and recent); 2. a motivation letter; 3. (optional) one or two supporting letters by academic staff or name(s) and email address(es) of one or two referees who know the candidate. Applications are open until November 10th 2018 and the selected student will be decided by December 1st 2018. More information on the project and on the research activity of our group is available at: -- Luiza Filipis,PhD Student Equipe MOTIV Laboratoire Interdisciplinaire de Physique (LIPhy), Université Grenoble Alpes et CNRS UMR 5588, Bat. E45, 140 avenue de la physique, Domaine univ., 38402 St Martin d'Hères cedex, FRANCE 33(0)476514731, Fax +33(0)476635495. luiza.filipis(a)univ-grenoble-alpes.fr http://marco-canepari.wix.com/neuron-imaging-team

1 0

Funded Mathematics PhD at the University of Exeter - Designing the dynamics of coupled oscillators
by Purcell, Sarah 16 Oct '18

16 Oct '18

Designing the dynamics of coupled oscillators<http://www.exeter.ac.uk/studying/funding/award/?id=3301> Mathematics PhD (funded) University of Exeter Supervisors: Dr Christian Bick<http://emps.exeter.ac.uk/mathematics/staff/cb618> - University of Exeter Dr Kyle Wedgwood<http://emps.exeter.ac.uk/mathematics/staff/kcaw201> - University of Exeter The University of Exeter's College of Engineering, Mathematics and Physical Sciences is inviting applications for a fully-funded PhD studentship to commence in January 2019 or as soon as possible thereafter. For eligible students the studentship will cover tuition fees (UK/EU/International) in full plus an annual tax-free stipend of at least £14,777 for 3.5 years full-time, or pro rata for part-time study. The student would be based in the Department of Mathematics in the College of Engineering, Mathematics and Physical Sciences in Exeter. Networks of interacting oscillatory units are abundant in nature and technology. Their function and dynamics governs crucial aspects of our lives, ranging from the stability of power grids to the dynamics of the human brain. The dynamics of oscillator networks depends on (1) which oscillators interact with which other oscillator and (2) how oscillators interact with one another. This project will contribute to the question how the interplay between these two factors shape the network dynamics. The main aim of this PhD project is to develop theoretical and numerical approaches how oscillator networks can be designed to have specific interactions. This will allow to generate networks that exhibit a range of synchronized and locally synchronized dynamics. Moreover, the supervisor is currently collaborating with the experimental group of Istvan Z Kiss in St Louis (USA) who are working on electrochemical oscillators. Hence, there may be an opportunity to help implement the theoretical results in real-world experimental systems. Entry requirements Applicants for this studentship must have obtained, or be about to obtain, a First or Upper Second Class UK Honours degree, or the equivalent qualifications gained outside the UK, in an appropriate area of science or technology. If English is not your first language you will need to have achieved at least 6.5 in IELTS and no less than 6.0 in any section by the start of the project. Alternative tests may be acceptable (see http://www.exeter.ac.uk/postgraduate/apply/english/)<http://see%20http:/www.exeter.ac.uk/postgraduate/apply/english/)> For more information, please contact Dr. Christian Bick (C.Bick(a)exeter.ac.uk<mailto:C.Bick@exeter.ac.uk>) or Dr. Kyle Wedgwood (K.C.A.Wedgwood(a)exeter.ac.uk<mailto:K.C.A.Wedgwood@exeter.ac.uk>) or see http://www.exeter.ac.uk/studying/funding/award/?id=3301

1 0

Interviews at SfN 2018 for a Postdoctoral Fellow in Neural Decoding and Data Analytics Lab - Center for Bioelectronic Medicine
by Zanos, Theodoros 16 Oct '18

16 Oct '18

Attending Neuroscience 2018 in San Diego? Apply to be considered for an interview during the conference by sending your CV to tzanos(a)northwell.edu The Neural Decoding and Data Analytics Lab at the Center for Bioelectronic Medicine, headed by Assistant Professor Theo Zanos PhD, focuses on neural recordings and data analysis methods to gain insights into decoding and encoding mechanisms of the brain and peripheral nerves to and from stimuli, actions and other physiological functions. The lab utilizes a variety of techniques from signal processing, machine learning, optimization, neurophysiology and bioelectronic systems for closed-loop neural recording and stimulation, both in health and in disease models. The ultimate goal is to develop neuromodulation therapies that will observe the state of the organism and the organ system that is targeted, to deliver individualized treatment of diseases in real-time. The successful candidate will develop or deploy computational tools, will take part in neurophysiology experiments and collect data, organize and analyze data, collaborate with other research staff and publish and present data in a timely manner. They will also work collaboratively with other investigators to facilitate their scientific research and training. Furthermore, they will participate in various types of institute and community activities and may apply for grant funding and/or patents as appropriate. The position comes with considerably competitive compensation. Job Responsibilities Include: Develops computational tools for neuroscience research. Run neurophysiology experiments. Performs bioelectronic medicine research. Collaborates with other research staff. Responsible for the planning, collection, organization, analysis, and interpretation of research data related to one or more projects Doctorate degree in Engineering, Computer Science or Statistics (Ph.D) required Authored/co-authored research papers and/or scientific abstracts, required Experience with various signal processing and machine learning methods, required Strong programming skills of Matlab, required, Python, C++, preferred Research experience in neurophysiology/neuroscience/animal surgery, preferred The information contained in this electronic e-mail transmission and any attachments are intended only for the use of the individual or entity to whom or to which it is addressed, and may contain information that is privileged, confidential and exempt from disclosure under applicable law. If the reader of this communication is not the intended recipient, or the employee or agent responsible for delivering this communication to the intended recipient, you are hereby notified that any dissemination, distribution, copying or disclosure of this communication and any attachment is strictly prohibited. If you have received this transmission in error, please notify the sender immediately by telephone and electronic mail, and delete the original communication and any attachment from any computer, server or other electronic recording or storage device or medium. Receipt by anyone other than the intended recipient is not a waiver of any attorney-client, physician-patient or other privilege.

1 0