July 2017 - Comp-neuro - lists.cnsorg.org

Vice Chancellor's 5-year Research Fellowship in Biocomputation, Mental Health and Wellbeing (University of Hertfordshire, U.K.)
by Steuber, Volker 12 Jul '17

12 Jul '17

Research Fellow: Biocomputation, Mental Health and Wellbeing University of Hertfordshire - School of Computer Science Location: Hatfield Salary: £32,004 to £38,183 Grade 7 p.a. Hours: Full Time Contract Type: Fixed-Term/Contract Placed on: 27th June 2017 Closes: 21st August 2017 Job Ref: 014834 FTE 1.0 FTE working 37 hours per week Duration of Contract: Fixed term contract 5 years from October 2017 Qualifications required: Very strong PhD degree in a quantitative research-oriented discipline, examples are computer science, mathematics, physics and neuroscience; excellent programming skills in at least one major computer language (essential), and very strong mathematical background, with particular emphasis on areas such as computer algebra, Krohn-Rhodes algebraic automata theory and language theory, discrete/continuous/constructive dynamical systems theory, group theory, algebraic topology, information theory, probability theory and statistics, and mathematical methods for computational intelligence. Background in computational neuroscience, including processing and analysis of EEG data, especially EEG microstates, is highly desirable. Experience writing high-quality research publications (essential) and grant applications (desirable), as well as excellent communication skills (essential). Successful history of working in multidisciplinary teams (highly desirable). Description of the research activity and area: Algorithms and Biocomputation are growing areas of research excellence at the University of Hertfordshire. This Fellowship targets the development and application of our novel computational and mathematical methods (e.g., automata-, language-theoretic and algebraic methods; computational mechanics and Krohn-Rhodes computational algebraic biology) to biological systems. The Research Fellow will support ongoing and future work characterizing the neurodynamical spatio-temporal structure of human mental states led by Professor Chrystopher L. Nehaniv and external collaborator Dr Elena Antonova (Institute of Psychiatry, Psychology and Neuroscience, King’s College London). Our current BIAL Foundation grant focuses on using EEG microstate ‘grammars’ to distinguish different mental states in expert meditators. EEG microstates are quasi-stable maps of electric potential landscapes of short duration, typically classed in a small number of discrete types analogous to ‘letters’ of an alphabet. The tendency for simple EEG microstate transitions between certain pairs of these discrete types has already been shown to characterize clinical populations (people with schizophrenia or Alzheimer’s vs. healthy controls). Our current research targets finer understanding of richer temporal neurodynamical structure and patterns, using these novel computational methods, toward harnessing their potential eventually for applications in Health and Wellbeing as a diagnostic tool for different clinical populations. The Fellow will reinforce the established collaboration with KCL, supporting validation and development of our methods toward their eventual application in clinical diagnosis and mental illness prevention, as well as in promotion of wellbeing. The Fellow will be expected to publish in high-impact journals and present conference papers together with Professor Nehaniv and Dr Antonova, to contribute to writing grant applications to national and international funding bodies [e.g., Wellcome Trust, EPSRC/BBSRC/MRC, European Commission, and other funding agencies], and contribute to REF outputs of the School of Computer Science. In accord with the CONCORDAT for professional development of researchers, the candidate may be afforded the opportunity to undertake a limited amount of appropriate teaching (upon mutual agreement). The Royal Society / Wolfson Biocomputation Research Laboratory at the University of Hertfordshire has a long history of interdisciplinary innovation in computational methods for systems biology and neural systems, as well as applications of bioinspired-methods to other fields. It enjoys close interdisciplinary links to the Adaptive Systems and Algorithms Research Groups, whose interests include mathematical computer science, compilers, security, networks, artificial Intelligence robotics, artificial life, language acquisition, human-robot interaction, etc., and have labs equipped with humanoid and non-humanoid robots, as well as 3D printing facilities. External research connections to UK, European and international partners (e.g. University of California, Berkeley; Univ. Debrecen and Renyi Institute, Hungary; Sardex, Italy; etc) are supported through numerous research council and EC-funded collaborations and projects. Skills and experience needed: The Fellow will have established him/herself as an independent researcher, capable of establishing a programme of research activity within the scope of the project. S/he will have excellent oral and written communication skills in both spoken and written English and a track record of publications in high impact journals. The Fellow will be expected to build capacity in the area of Biocomputation and participate in attracting external funding, previous success being a desirable attribute. S/he should be able to establish good working relationships, and work closely with members of the Centre for Computer Science and Informatics Research and the School of Computer Science, at the University of Hertfordshire and with partner organisations as appropriate. The fellow should have knowledge of research methodology appropriate for the subject area and knowledge of appropriate databases for the discipline and ability to conduct literature searches in the discipline using appropriate electronic resources. Contact Details: Informal enquiries can be made to Professor Chrystopher L. Nehaniv, email: C.L.Nehaniv(a)herts.ac.uk<mailto:C.L.Nehaniv@herts.ac.uk> tel: +44 1707 284470<tel:01707%20284470> The University offers a range of benefits including a pension scheme, professional development, family friendly policies, child care vouchers, a fee waiver of 50% for all children of staff under the age of 21 at the start of the course, discounted memberships at the Hertfordshire Sports Village and generous annual leave. To make a formal application, follow links and apply on-line: http://www.jobs.ac.uk/job/BCH822/research-fellow-biocomputation-mental-heal…

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Postdoc Position: Learning Dynamics in Recurrent Networks
by Shouval, Harel 11 Jul '17

11 Jul '17

A postdoc position is available in the Shouval lab. The Postdoc will work on a project funded by the BRAIN grant: “Learning spatio-temporal statistics from the environment in recurrent networks”. In this project we will model both recurrent network models, and also the learning rules that allow them to learn their dynamics from environmental cues. This project is a collaboration between the lab of Harel Shouval at the University of Texas in Houston, and the lab of Nicolas Brunel at Duke. This is a two-year position and it can start immediately. The Shouval lab is a leader in developing models of synaptic plasticity and understanding their impact on learning and memory. The models we develop span from the molecular level and up to the systems level. In our some of our recent work we study the impact of synaptic plasticity on recurrent network dynamics and on incorporating reinforcement learning into biophysical plasticity models. We use both computational and analytical techniques to study these issues. The Shouval lab is located in the department of Neurobiology and Anatomy, in the UT medical school. Houston has a thriving Neuroscience community and it is an excellent environment for Theoretical and Computational Neuroscience. There is a high concentration of Theoretical Neuroscience labs at the different Houston area Universities (Baylor, Rice, UH, UT). Our Theoretical Neuroscience community is highly collaborative and there is a joint organization to foster these collaborations; the Gulf Coast Consortium in Theoretical and Computational Neuroscience (GCC-TCN). We hold an annual conference, joint graduate courses and a journal club. The ideal candidate will have a PhD in Computational Neuroscience with strong analytical and computational skills. I will also consider candidates with a background in the Physical or Computational Sciences who would like to become a Theoretical Neuroscientists. If you want to apply please send me your CV, and a brief cover letter that includes names of possible references. I will also be happy to answer any question you might have about the project or the position. Harel Shouval Professor Department of Neurobiology and Anatomy The University of Texas Medical School, Houston Director of the Neuroscience Graduate program Email: harel.shouval(a)gmail.com<mailto:harel.shouval@gmail.com> Web: https://med.uth.edu/nba/faculty/harel-shouval/

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POSTDOCTORAL FELLOWSHIP IN COMPUTATIONAL MODELING OF BRAIN NETWORKS at Stanford University
by Aarthi Padmanabhan 11 Jul '17

11 Jul '17

The Stanford Cognitive and Systems Neuroscience Laboratory invites applications for a postdoctoral fellowship in human brain network analysis and modeling. We seek candidates with strong research backgrounds in one or more of the following areas: resting-state and task-evoked fMRI connectivity, structural HARDI-based connectivity, neurophysiological modeling of brain networks, Bayesian modeling, machine learning, and deep neural networks. Candidates must have strong computational skills and a PhD in computational neuroscience, computer science, physics, biomedical engineering or related fields. This is an exciting opportunity to work on multiple NIH- and Stanford-funded projects using multimodal (fMRI, optogenetic, DTI, EEG) brain imaging techniques in multiple clinical populations and normative groups. The successful candidate will develop a vigorous research program that contributes to, and complements, ongoing research studies. The candidate will have access to state-of-the-art brain imaging and HPC/GPU facilities. Please email a CV, statement of research interests and relevant background, and names of three referees to Drs. Vinod Menon and Aarthi Padmanabhan at scsnl.stanford+postdoc(a)gmail.com<mailto:scsnl.stanford@gmail.com> Aarthi Padmanabhan, PhD Scientific Research Director Stanford Cognitive and Systems Neuroscience Laboratory Department of Psychiatry and Behavioral Sciences Stanford University School of Medicine

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Neuroscience Gateway Workshop at SFN 2017 meeting
by Ted Carnevale 11 Jul '17

11 Jul '17

Using the Neuroscience Gateway Portal for Parallel Simulations Saturday, Nov. 11 from 9 AM to noon at downtown Washington DC location. This workshop combines didactic presentations and hands-on instruction on how to use the Neuroscience Gateway Portal (NSG) for computationally intensive simulations and data analysis. NSG eliminates most technical and adminstrative barriers to using high performance computing resources, and even gives away free CPU time on parallel supercomputers. Software currently installed on NSG includes BluePyOpt, Brian, CARLsim, Freesurfer, GENESIS, MATLAB, MOOSE, NEST, NEURON, PyNN, and the Virtual Personalized Multimodal Connectome Pipeline. The registration deadline for this workshop is Friday Oct. 27, but you should sign up early because space is limited. See https://www.neuron.yale.edu/neuron/static/courses/nsg2017/nsg2017.html for more information and a link to the registration form. --Ted

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NEURON course at SFN 2017 meeting
by Ted Carnevale 11 Jul '17

11 Jul '17

Using NEURON to Model Cells and Networks Friday, Nov. 10 from 9 AM to 5 PM at a downtown Washington DC location. This course provides a practical introduction to building and using models of neurons and networks with NEURON. Covered topics include basic concepts, workflow for building and using models, speeding up simulations with parallel hardware from multicore personal computers to massively parallel supercomputers, using Python with NEURON, and modeling reactive diffusion with the RxD class. The registration deadline for this course is Friday Oct. 27, but you should sign up early because space is limited. See http://www.neuron.yale.edu/neuron/static/courses/dc2017/dc2017.html for more information and a link to the registration form. --Ted

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Announcing the workshop on cloud-based BCIs at the BCI Conference 2017
by Vinay Jayaram 11 Jul '17

11 Jul '17

Dear all, We are happy to announce to potential attendees of the 7th BCI Conference in September 2017 that Workshop 1 (Cloud-based BCIs: challenges and opportunities of home-use systems for big data collection) is now calling for abstracts about work on BCIs for home use. This workshop is intended to bring together the various subfields of the BCI community to focus on some of the most pressing issues in the field: Robust machine learning with large datasets, low-cost and robust hardware, and applications for use without expert assistance. We are also happy to confirm Dr. Tim Mullen (Qusp Neurotechnologies) and Prof. Brian Murphy (BrainWaveBank) as keynote speakers for our workshop. More information and the workshop schedule can be found here https://webdav.tuebingen.mpg.de/graz2017/. Interested parties are invited to submit a 200-word abstract about the work they would like to present either via the website or to cloudbci(a)tuebingen.mpg.de by 4 August. Looking forwards to seeing you in Graz, Vinay Jayaram -- Vinay Jayaram PhD Student Max Planck Institute for Intelligent Systems Spemannstrasse 34, 72076 Tübingen, Germany

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Two PI positions in Cognitive Neuroscience, University of Trento, Italy
by moritzwurm 11 Jul '17

11 Jul '17

Call for Expression of Interest for two Assistant Professor positions. More senior candidates will also be considered. *Cognitive Neuroimaging Principal Investigator, University of Trento, Neuroimaging Labs (LNiF), Center for Mind-Brain Sciences (CIMeC), Trento, Italy* The Center for Mind-Brain Sciences (CIMeC) at the University of Trento, Italy, invites expressions of interest from highly motivated scholars in view of the opening of two principal investigator positions at the level of assistant professor (3 years + potential 2 year extension). Candidates who have already a tenured position elsewhere would be considered directly for a tenure-track assistant professor/tenured associate professor. /Research Profile/ The ideal candidate should have an established track record of _research in any area of cognitive neuroimaging studies, preferably fMRI_. The successful candidates will work in the Neuroimaging Labs (LNiF: http://www.cimec.unitn.it/en/69/neuroimaging-labs-lnif) at the Center for Mind-Brain Sciences (CIMeC: http://web.unitn.it/en/cimec) They are expected to develop their own research program but also to interact actively with other CIMeC faculty using different methodologies to address various aspects of cognitive functioning. Knowledge of Italian is appreciated but not required. /Teaching/ The successful candidates are expected to contribute to the Center’s teaching mission at the PhD and MSc level. Instruction is in English. Successful candidates will negotiate the possibility of supervising PhD students who are fully funded by the University. The teaching duties at the MSc level vary depending on academic rank. Assistant professors are expected to teach 60 hrs/year, tenure-track assistant professors 90 hrs/year, tenured associate professors 120 hrs/year. UniTN and CIMeC The University of Trento consistently ranks as a top Italian university in both national Research Assessment Evaluations (RAE) and University Surveys.In the latest RAE the University of Trento as a whole ranks 1st among medium-sized universities. The CIMeC's goal is to foster cutting-edge research on cognition and its neural basis, and to support the dissemination of these findings internationally and within the local community. As an interdisciplinary research and teaching center, it draws on faculty from several departments, including Psychology and Cognitive Science, Linguistics and Philosophy, Physics, Mathematics, and Information Engineering and Computer Science. Current faculty members come from Italy, Germany, The Netherlands, Belgium, USA, Canada, Argentina, Israel, and the United Kingdom. Although a relatively small group, CIMeC faculty have won many competitive national and international grants, including 1 European Research Council (ERC) advanced grant, 1 ERC consolidator grant, 6 ERC starting grants, other European Framework grants, and highly competitive grants awarded by the local government. The Center has consistently been ranked the leading cognitive neuroscience research unit in Italy. It is part of the Erasmus Mundus European Master Program in Language and Communication Technologies. Expressions of interest in English should include a brief motivation letter and a Curriculum Vitae and should be addressed to Dr. Alfonso Caramazza (alfonso.caramazza(a)unitn.it) <mailto:alfonso.caramazza@unitn.it%29>, who chairs a committee that includes Drs. Mel Goodale and Alex Martin.

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PhD studentship: "The risk of unknowingly disclosing personal information through eye tracking and webcam technology"
by Durant, Szonya 11 Jul '17

11 Jul '17

Leverhulme Magna Carta Doctoral Scholarship Department of Psychology and Department of Computer Science, Royal Holloway, University of London Project: The risk of unknowingly disclosing personal information through eye tracking and webcam technology Supervisors: Dr Szonya Durant (Dept. of Psychology), Dr Dawn Watling (Dept. of Psychology) and Dr Zhiyuan Luo (Dept. of Computer Science) Applications are invited for a funded full-time studentship for doctoral research, Awarded under the Leverhulme Magna Carta Doctoral Centre starting in September 2017 (with the possibility of extending the start date until January 2018 at the very latest). The scholarship covers UK and European Union tuition fees and an annual stipend towards living expenses. The 2017/18 value of the stipend is £16,553. The Research Project This project will assess the risk of unknowingly disclosing personal information over social media, simply through how we move our eyes when interacting with or scanning social media. We aim to examine what personal information (e.g. age, sex, aspects of personality) can be determined from eye movement patterns whilst scanning social media using machine learning. This interdisciplinary PhD project draws on the fields of sensory neuroscience, in particular, the experimental study of eye movements and the latest cutting edge computer science developments in machine learning. The novelty of the proposed interdisciplinary approach promises to yield original insights that will expand the knowledge and understanding in both fields of study and have impact for our understanding of issues around internet privacy. This project is supervised by three experts in their field, the primary PhD supervisor (Dr Szonya Durant<https://pure.royalholloway.ac.uk/portal/en/persons/szonya-durant(64105598-7…>) and two co-supervisors (Dr Dawn Watling<https://pure.royalholloway.ac.uk/portal/en/persons/dawn-watling(70194d88-af…>and Dr Zhiyuan Luo<https://pure.royalholloway.ac.uk/portal/en/persons/zhiyuan-luo(cb78d990-b10…>). Both Dr Durant and Dr Watling are based in The Department of Psychology, which has an active and expanding postgraduate research community, is well-equipped for research. It was ranked 6th out of 82 UK Psychology Departments in the 2014 Research Excellence Framework (REF), with 93% of the research classified as world-leading or internationally excellent. Research in the Department spans a breadth of topics across psychological sciences and neuroscience and is supported by excellent facilities - further information on the research environment can be found here<https://www.royalholloway.ac.uk/psychology/research/home.aspx>. Dr Luo is based in the Department of Computer Science, one of the UK's leading centres for research into Computer Science - further information on the research environment can be found here<https://www.royalholloway.ac.uk/computerscience/research/home.aspx>. In the most recent Research Excellent Framework (REF 2014), it was ranked 11th in the UK for the quality of research output, with a third of publications recognised as world leading, and a further half internationally excellent (87% in total). Both departments are situated on a beautiful campus close to London. Applicants should ideally hold, or be predicted to achieve, a first class undergraduate degree or equivalent in Cognitive or Computer Sciences or related disciplines (minimum requirement: 2.1). An MSc in a Cognitive or Computer Sciences related subject is desirable but not essential. The ideal candidate will have strong skills in computer programming and data analysis. Eye tracking and experimental design experience would be advantageous. The Scholarship The scholarship will fund a full-time PhD for three years, during which time a full academic training programme will be provided. The successful candidate will be engaged in all aspects of the research project, including engaging with and disseminating findings to external stakeholders. The successful candidate will be expected to contribute to the activities of the Magna Carta Doctoral Centre as well as the postgraduate research community in the Department of Psychology including contributing to teaching. For further details about the Leverhulme Magna Carta Doctoral Centre, please see: https://www.royalholloway.ac.uk/iquad/news/articles/leverhulmemagnacartadoc… https://www.royalholloway.ac.uk/studyhere/researchdegrees/feesandfunding/le… Informal enquiries about the project should be directed to: szonya.durant(a)rhul.ac.uk<mailto:szonya.durant@rhul.ac.uk>. Fulldetails on how to make an application are shown on our Departmental Website<https://www.royalholloway.ac.uk/psychology/prospectivestudents/postgraduate…>(select tab "3. Leverhulme Magna Carta Studentships") and in the College Webpages<https://www.royalholloway.ac.uk/studyhere/researchdegrees/applying/applicat…>. For further details on the application process please contact: Sharon Clutterbuck on psyoffice(a)rhul.ac.uk<mailto:psyoffice@rhul.ac.uk>. Closing date: 5pm on Tuesday 1st August 2017 (may be extended if not enough applications are received for the September start date) Interview dates: 7-18 August (can be flexible around existing commitments) ********************************************************************** Szonya Durant Department of Psychology Royal Holloway, University of London Egham TW20 0EX 01784 276522

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2 PhD in computational cognitive neuroscience / comp linguistics, Uni Birmingham, UK
by Uta Noppeney 11 Jul '17

11 Jul '17

The Computational Cognitive Neuroimaging Group at the University of Birmingham, UK, is seeking two enthusiastic PhD candidates with strong analytical and quantitative abilities for the projects: 1. Robust audiovisual speech recognition in man and machine https://www.findaphd.com/search/ProjectDetails.aspx?PJID=87556 2. Who does what to whom - Syntactic parsing in man and machine https://www.findaphd.com/search/ProjectDetails.aspx?PJID=87595 Applicants should have a background in computer science, neuroscience, computational linguistics, psychology, physics or related areas. Prior experience in statistical analysis and/or machine learning would be an advantage. The PhD positions are open to UK and EU nationals. A full 4 year studentship award comprises of an annual stipend at £14,553 for 2017/18 (pro rota for part-time) and full payment of tuition fees at UK/EU level of £4,195 in 2017/18. Application deadline 28th July 2017. For further information, please see http://www.birmingham.ac.uk/postgraduate/pgr/epsrc-studentships/index.aspx, links above or email Prof Uta Noppeney (U.Noppeney(a)bham.ac.uk)

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Job position: PhD / Post-Doc researcher: Deep-Learning and EEG/ECG
by Martijn Arns 11 Jul '17

11 Jul '17

Dear colleagues, We have a vacancy for a PhD or Post-Doc researcher with a focus on applying and developing Deep Learning on EEG and ECG data. See below application text and also: https://www.brainclinics.com/vacature Feel free to distribute with interested colleagues. Research Institute Brainclinics is specialized in applied neuroscience with a focus on mood, concentration, and sleep problems as often seen in psychiatric disorders such as depression, ADHD, OCD, and insomnia. Furthermore, Brainclinics is specialized in research into neuromodulation techniques such as rTMS, tDCS and neurofeedback, personalized medicine, Research Domain Criteria (RDoC), chronobiology, sleep and the circadian system. Within our team we are currently looking for a PhD-candidate or Post-Doc Researcher that will focus on developing and evaluating Deep-Learning techniques applied to psychophysiological data such as EEG and ECG, to extract new knowledge from large datasets to foster the RDoC and personalized medicine approaches we investigate. As PhD-candidate/Post-Doc at Brainclinics, you will work in a varied research team consisting of several PhD-candidates as well as senior researchers. You will contribute to innovation in EEG/ECG analysis techniques, support current PhD-candidates with your technical skills, and develop your own research line focusing on Deep-Learning techniques applied to EEG/ECG. To be eligible for application, you need to have demonstrable experience with the techniques listed below. Especially experience with Deep-Learning techniques is a requirement. We expect: • A Master’s degree and/or PhD in a relevant discipline, e.g., (cognitive) neuroscience, physics etc. • Scientific ambition and drive • Knowledge of python and one more higher programming language (e.g. C#) • Knowledge in matrix computation (e.g. MATLAB) • Knowledge of AI-concepts • Knowledge of time series computation • Accented knowledge of Deep learning techniques with net architectures and layer structures such as convolutional layers and LSTM layers • Experience with neuropsychiatric disorders We offer: • A professional, efficient and innovative research team • A minimum contract for 32 hrs, with possible extension to 40 hrs. • A salary in line with the University CAO Apply If you’re interested in this position and you would like to apply, please send your motivation with CV and photo to Dr. Martijn Arns: martijn(a)brainclinics.com<mailto:martijn@brainclinics.com> Only applications that meet the criteria above will be evaluated. Closing date for this application is August 21st, 2017. Kind regards, Martijn Arns, PhD Research Institute Brainclinics Utrecht University Dept. of Experimental Psychology Twitter: @Brainclinics Bijleveldsingel 34 6524 AD Nijmegen The Netherlands Tel: +31(0)24-7503505 GSM: +31 (0)6-48177919 E-mail: martijn(a)brainclinics.com<mailto:martijn@brainclinics.com> URL: www.brainclinics.com<http://www.brainclinics.com/>

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