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Call for Papers: LDAB@CIBB2014
by Andrea Bracciali April 1, 2014

April 1, 2014

[We apologize if you have received multiple copies of this message] ==================================================== Call for papers Large-scale and HPC data analysis in bioinformatics: Intelligent methods for computational, systems and synthetic biology. 26-28 June 2014 University of Cambridge, UK http://www.cussb.unisr.it/cibb2014/ss.html#LSAHDAIB Special Session of CIBB 2014 (later deadline): Eleventh International Meeting on Computational Intelligence Methods for Bioinformatics and Biostatistics http://www.cussb.unisr.it/cibb2014/index.html *** Submission deadline: 5th May 2014 *** ==================================================== AIMS and SCOPE Biomedical research is currently facing the Big Data wave created by the huge amount of experiments performed every day in omics sciences. This new situation demands appropriate IT-infrastructures and scalable software to analyse data within an acceptable timespan. Massive parallel clusters, distributed technologies, on-Chip solutions such as GPGPU and Xeon Phi must be exploited with adequate algorithmic solutions to reach their full potential. The aim of this special session is to bring together researchers interested in cutting-edge methods to address the challenges posed by the huge amount of data produced in omics science. The idea is to present the latest advancements concerning High Performance Computing solutions required to treat multi-omics data and the related Big Data paradigms that are needed to manage the large-scale challenges of current computational biology. Examples of relevant areas of interest within this context include - but are not limited to - - Next-Generation Sequencing data analysis and interpretation, - Genomics patterns identification and mining, - Transcriptomics and Proteomics data integration, - Systems Biology models simulation and optimization, - Structural Biology and Molecular Dynamics, - Synthetic Biology circuits design and simulation. SUBMISSION GUIDELINES http://www.cussb.unisr.it/cibb2014/calls.html#submissions Papers should be submitted in PDF format on the Easy Chair conference system. Paper length should be at least 4 pages and should not exceed 6 pages. Papers are required to be structured according to the following five sections: • 1. Scientific background • 2. Material and methods • 3. Results • 4. Conclusion • 5. References (no more than 10) (Please refer to the latex template on the web page for more accurate instructions). Please note that only PDF versions of papers can be accepted, as the proceedings of CIBB will be produced starting from them. A correct submission requires selecting this special session in the submission system. PUBLICATION Each paper will be peer-reviewed and the resulting scores used to determine invitations for oral or poster presentations. Following the conference, an extended version of the presented contributions (12 page format) will be considered for publication in the Springer’s Lecture Notes in Bioinformatics (LNBI) series. Moreover, a selection of the best papers will be considered for pu blication in a special issue of BMC Bioinformatics dedicated to CIBB2014. IMPORTANT DATES Paper submission: 5th May 2014 Acceptance notification: 10th May 2014 Camera ready due: 30th May 2014 Conference: 26th - 28th June 2014 ORGANISERS Andrea Bracciali, University of Stirling, UK Ivan Merelli, CNR-ITB, Italy CONTACTS Andrea Bracciali, University of Stirling, UK Computing Science and Mathematics School of Natural Sciences Stirling University abb(a)cs.stir.ac.uk +44 (0)1786 467446 Ivan Merelli, CNR-ITB, Italy Institute for Biomedical Technologies Consiglio Nazionale delle Ricerche ivan.merelli(a)itb.cnr.it +39 02 26422600

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Deadline is April 2nd (but site will be open until April 4th): Call for Applications in 2014 Telluride Neuromorphic Cognition Engineering Workshop
by Ralph Etienne-Cummings April 1, 2014

April 1, 2014

Telluride Neuromorphic Cognition Engineering Workshop 2014 Neuromorphic Cognition Engineering Workshop: The 20th Anniversary Edition Telluride, Colorado, June 29th - July 19th, 2014 CALL FOR APPLICATIONS: Deadline is April 2nd, 2014 NEUROMORPHIC COGNITION ENGINEERING WORKSHOP www.ine-web.org Sunday June 29th - Saturday July 19th, 2014, Telluride, Colorado We invite applications for a three-week summer workshop that will be held in Telluride, Colorado.Sunday June 29th - Saturday July 19th, 2014. The application deadline is Wednesday, April 2nd and application instructions are described at the bottom of this document. This is the 20th Anniversary of the Workshop, and ~25 years since the conception of the "Meadian" version of Neuromorphic Engineering. Hence, we plan a celebratory Workshop, where some of the originators and benefactors of the field will participate in discussions of the successes and challenges over the past 25 years and prognosticate the potential contributions for the next 25 years. The 2014 Workshop and Summer School on Neuromorphic Engineering is sponsored by the National Science Foundation, Institute of Neuromorphic Engineering, Qualcomm Corporation, The EU-Collaborative Convergent Science Network (CNS-II), University of Maryland - College Park, Institute for Neuroinformatics - University of Zurich and ETH Zurich, Georgia Institute of Technology, Johns Hopkins University, Boston University, University of Western Sydney and the Salk Institute. Directors: Cornelia Fermuller, University of Maryland, College Park Ralph Etienne-Cummings, Johns Hopkins University Shih-Chii Liu, Institute of Neuroinformatics, UNI/ETH Zurich, Switzerland Timothy Horiuchi, University of Maryland, College Park Workshop Advisory Board: Andreas Andreou, Johns Hopkins University Andre van Schaik, University Western Sydney, Australia Avis Cohen, University of Maryland Barbara Shinn-Cunningham, Boston University Giacomo Indiveri, Institute of Neuroinformatics, Uni/Eth Zurich, Switzerland Jonathan Tapson, University Western Sydney, Australia Malcolm Slaney, Microsoft Research Jennifer Hasler, Georgia Institute of Technology Rodney Douglas, Institute of Neuroinformatics, Uni/Eth Zurich, Switzerland Shihab Shamma, University of Maryland Tobi Delbruck, Institute of Neuroinformatics, Uni/Eth Zurich, Switzerland Previous year workshop can be found at: ine-web.org/workshops/workshops-overview/index.htmland the workshop wiki is athttps://neuromorphs.net/ GOALS: Neuromorphic engineers design and fabricate artificial neural systems whose organizing principles are based on those of biological nervous systems. Over the past 18 years, this research community has focused on the understanding of low-level sensory processing and systems infrastructure; efforts are now expanding to apply this knowledge and infrastructure to addressing higher-level problems in perception, cognition, and learning. In this 3-week intensive workshop and through the Institute for Neuromorphic Engineering (INE), the mission is to promote interaction between senior and junior researchers; to educate new members of the community; to introduce new enabling fields and applications to the community; to promote on-going collaborative activities emerging from the Workshop, and to promote a self-sustaining research field. FORMAT: The three week summer workshop will include background lectures on systems and cognitive neuroscience (in particular sensory processing, learning and memory, motor systems and attention), practical tutorials on emerging hardware design, mobile robots, hands-on projects, and special interest groups. Participants are required to take part and possibly complete at least one of the projects proposed. They are furthermore encouraged to become involved in as many of the other activities proposed as interest and time allow. There will be two lectures in the morning that cover issues that are important to the community in general. Because of the diverse range of backgrounds among the participants, some of these lectures will be tutorials, rather than detailed reports of current research. These lectures will be given by invited speakers. Projects and interest groups meet in the late afternoons, and after dinner. In the early afternoon there will be tutorials on a wide spectrum of topics, including analog VLSI, mobile robotics, vision and auditory systems, central-pattern-generators, selective attention mechanisms, cognitive systems, etc. 2014 TOPIC AREAS: Human Auditory Cognition: Acoustic Priming, Imagination and Attention. Project Leaders: Shihab Shamma (UM-College Park), Malcolm Slaney (Microsoft), Edward Lalor (Trinity College, Dublin), Barbara Shinn-Cunningham (Boston U) Motion and Action Processing on Wearable Devices Project Leaders: Michael Pfeiffer (INI-UZH), Ryad Benosman (UPMC, Paris), Garrick Orchard (NUS, Singapore), and Cornelia Fermüller (UMCP) Planning with Dynamic Neural Fields: from Sensorimotor Dynamics to Large-Scale behavioral Search Project Leaders: Yulia Sandamirskaya (RUB, Bochum) and Erik Billing (U. Skovde) Neuromorphic Olympics Project Leaders: Jorg Conradt (TUM, Munich) and Terry Stewart (U. Waterloo) Embodied Neuromorphic Real-World Architectures of Perception, Cognition and Action Project Leaders: Andreas Andreou (JHU) and Paul Verschure (UPF, Barcelona) Terry Sejnowski (Salk Institute) - Computational Neuroscience (invitational mini-workshop) LOCATION AND ARRANGEMENTS: The summer school will take place in the small town of Telluride, 9000 feet high in southwest Colorado, about 6 hours drive away from Denver (350 miles). Great Lakes Aviation and America West Express airlines provide daily flights directly into Telluride. All facilities within the beautifully renovated public school building are fully accessible to participants with disabilities. Participants will be housed in ski condominiums, within walking distance of the school. Participants are expected to share condominiums. The workshop is intended to be very informal and hands-on. Participants are not required to have had previous experience in analog VLSI circuit design, computational or machine vision, systems level neurophysiology or modeling the brain at the systems level. However, we strongly encourage active researchers with relevant backgrounds from academia, industry and national laboratories to apply, in particular if they are prepared to work on specific projects, talk about their own work or bring demonstrations to Telluride (e.g. robots, chips, software). Wireless internet access will be provided. Technical staff present throughout the workshops will assist with software and hardware issues. We will have a network of PCs running LINUX and Microsoft Windows for the workshop projects. We encourage participants to bring along their personal laptop. No cars are required. Given the small size of the town, we recommend that you do not rent a car. Bring hiking boots, warm clothes, rain gear, and a backpack, since Telluride is surrounded by beautiful mountains. Unless otherwise arranged with one of the organizers, we expect participants to stay for the entire duration of this three week workshop. FINANCIAL ARRANGEMENTS: Notification of acceptances will be mailed out around the April 15th, 2014. The Workshop covers all your accommodations and facilities costs for the 3 weeks duration. You are responsible for your own travel to the Workshop, however, sponsored fellowships will be available as described below to further subsidize your cost. Registration Fees: For expenses not covered by federal funds, a Workshop registration fee is required. The fee is $1250 per participant for the 3-week Workshop. This is expected from all participants at the time of acceptance. Accommodations: The cost of a shared condominium, typically a bedroom in a shared condo for senior participants or a shared room for students, will be covered for all academic participants. Upgrades to a private rooms or condos will cost extra. Participants from National Laboratories and Industry are expected to pay for these condominiums. Fellowships: This year we will offer two Fellowships to subsidize your costs: Qualcomm Corporation Fellowship: Three non-corporate participants will have their accommodation and registration fees ($2750) directly covered by Qualcomm, and will be reimbursed for travel costs up to $500. Additional generous funding from Qualcomm will provide $5000 to help organize and stage the Workshop. EU-CSNII Fellowship (http://csnetwork.eu/) which is funded by the 7th Research Framework Program FP7-ICT-CSNII-601167: The top 8 EU applicants will be reimbursed for their registration fees ($1250), subsistence/travel subsidy (up to Euro 2000) and accommodations cost ($1500). The registration and accommodation costs will go directly to the INE (the INE will reimburse the participant's registration fees after receipt from CSNII), while the subsistence/travel reimbursement will be provided directly to the participants by the CSNII at the University of Pompeu Fabra, Barcelona, Spain. HOW TO APPLY: Applicants should be at the level of graduate students or above (i.e. postdoctoral fellows, faculty, research and engineering staff and the equivalent positions in industry and national laboratories). We actively encourage women and minority candidates to apply. Anyone interested in proposing or discussing specific projects should contact the appropriate topic leaders directly. The application website is (after February 7th, 2014): ine-web.org/telluride-conference-2014/apply-info Application information needed: Contact email address. First name, Last name, Affiliation, valid e-mail address. Curriculum Vitae (a short version, please). One page summary of background and interests relevant to the workshop, including possible ideas for workshop projects. Please indicate which topic areas you would most likely join. Two letters of recommendation (uploaded directly by references). Applicants will be notified by e-mail. 7th February, 2014 - Applications accepted on website 2nd April, 2014 - Applications Due 15th April, 2014 - Notification of Acceptance -- Ralph Etienne-Cummings, PhD, FIEEE Professor Department of Electrical and Computer Engineering Computational Sensor Motor Systems Lab

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Summer school in Computational Sensory-Motor Neuroscience (CoSMo 2014)
by Gunnar Blohm March 31, 2014

March 31, 2014

*Fourth Annual Computational Sensory-Motor Neuroscience Summer School (CoSMo 2014)* University of Minnesota, Minneapolis, MN, USA August 3-17, 2014 We would like to invite you to join us for the third annual Computational Sensory-Motor Neuroscience Summer School. The course is about experimental, computational and medical aspects of sensory-motor neuroscience with a focus on data/model sharing. Covered topics include Bayesian approaches, motor control, computational neuroimaging, sensory-motor transformations and prosthetics. An important focus is on doing research as opposed to just hearing about it. Each teaching module will take up two days with morning lecture sessions. Afternoon sessions involve hands-on Matlab programming, simulation and data-analysis. Newly acquired computational tools can also be applied in 2-week evening group research projects. The course is aimed at students and post-doctoral fellows from diverse backgrounds including Life Sciences, Psychology, Computer Science, Physics, Mathematics and Engineering. Basic knowledge in calculus, linear algebra and Matlab is expected. Enrollment will be limited to 40 trainees. *Application deadline: April 27, 2014* For more information and to apply, please go to http://www.compneurosci.com/CoSMo/ The school is co-organized by Drs Gunnar Blohm, Paul Schrater and Konrad Körding. It receives funding from the National Sciences and Engineering Research Council of Canada (NSERC) via an NSERC-CREATE training grant on "Computational Approaches in Neuroscience – Action, Control & Transformations", and from the National Science Foundation (NSF, USA). -- ------------------------------------------------------- Dr. Gunnar BLOHM Assistant Professor in Computational Neuroscience Centre for Neuroscience Studies, Departments of Biomedical and Molecular Sciences, Mathematics & Statistics, and Psychology, School of Computing, and Canadian Action and Perception Network (CAPnet) Queen’s University 18, Stuart Street Kingston, Ontario, Canada, K7L 3N6 Tel: (613) 533-3385 Fax: (613) 533-6840 Email:Gunnar.Blohm@QueensU.ca Web:http://www.compneurosci.com/

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2014 NEURON Summer Course
by Ted Carnevale March 31, 2014

March 31, 2014

This year's NEURON Summer Course has two components that can be taken individually or together. NEURON Fundamentals, which runs from June 21-24, addresses all aspects of using NEURON to model individual neurons, and also introduces parallel simulation and the fundamentals of modeling networks. Parallel Simulation with NEURON is for users who are already familiar with NEURON and need to create models that will run on parallel hardware. Registration is limited, and the registration deadline is Friday, May 30, 2014. For more information regarding NEURON courses see http://www.neuron.yale.edu/neuron/courses --Ted

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Open Source Brain workshop 2014: Building and sharing models of the cortex
by solinas March 31, 2014

March 31, 2014

(Apologies for cross postings) Announcing the 2014 Open Source Brain Workshop: Building and sharing models of the cortex. May 14-16th, Alghero, Sardinia. There are an increasing number of cortical cell and network models being developed and made publicly available, from networks of leaky integrate and fire neurons based on cortical connectivity and firing properties, to multicompartmental, conductance based cell models. Many of these are being reused, reimplemented and extended to address new scientific questions by labs around the world. In this meeting, we will look at the range cortico-thalamic models out there which are of widespread interest and work towards getting these into public, open source repositories, in standardised formats such as NeuroML and PyNN. We will investigate the steps needed to ensure these models are well tested, annotated and ready for use as research tools by the attendees and the wider community. There will be presentations from experimentalists who are producing the data to constrain these models, as well as simulator and application developers who will create the infrastructure to build, simulate, analyse and share the models. On the morning of Friday 16th, there will be a symposium on Oscillation and Resonance in CNS Network Loops. The symposium will focus on the reconstruction and analysis of oscillating networks. These methods can be applied at multiple levels of brain modelling providing valuable constraints for single neuron and network models. There will be presentations of modelling studies on how the brain generates oscillations and how external, oscillating electro-magnetic fields influence brain activity. Confirmed speakers Sharon Crook, Arizona State University, USA Markus Diesmann, Research Center Jülich, Germany Dirk Feldmeyer, Aachen University, Germany Alon Korngreen, Bar-Ilan University, Israel Dave Lester, SpiNNaker project, University of Manchester, UK Robert A. McDougal, Yale University School of Medicine, USA Michele Migliore, National Research Council, Italy & Yale University School of Medicine, USA Eilif Muller, Blue Brain Project, EPFL, Switzerland Ole Paulsen, University of Cambridge, UK Angus Silver, University College London Tim Vogels, University of Oxford, UK Daniel Wójcik, Nencki Institute, Poland Full details of the workshop can be found here: http://www.opensourcebrain.org/projects/osb/wiki/OSB2014 There will also be a NeuroML Editorial Board meeting on Tues 13th. More details will follow on the NeuroML mailing lists. Interested parties are welcome to attend; please email p.gleeson(a)ucl.ac.uk. The Open Source Brain initiative aims to encourage collaborative, open source model development in computational neuroscience and is primarily supported by the Wellcome Trust. The OSB symposium is primarily supported by the IRCCS C. Mondino and the Italian Ministry of Health through the research project GR-2009-1493804. Regards, The OSB 2014 organising committee

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New book - Directed Information Measures in Neuroscience
by Joseph Lizier March 31, 2014

March 31, 2014

Dear all, We are pleased to announce the publication of the following edited book: "Directed Information Measures in Neuroscience" edited by Michael Wibral, Raul Vicente, Joseph T. Lizier in series "Understanding Complex Systems", Springer, Berlin, 2014. About the book: http://www.springer.com/physics/complexity/book/978-3-642-54473-6 Analysis of information transfer has found rapid adoption in neuroscience, where a highly dynamic transfer of information continuously runs on top of the brain's slowly-changing anatomical connectivity. Measuring such transfer is crucial to understanding how flexible information routing and processing give rise to higher cognitive function. Directed Information Measures in Neuroscience reviews recent developments of concepts and tools for measuring information transfer, their application to neurophysiological recordings and analysis of interactions. Written by the most active researchers in the field the book discusses the state of the art, future prospects and challenges on the way to an efficient assessment of neuronal information transfer. Highlights include the theoretical quantification and practical estimation of information transfer, description of transfer locally in space and time, multivariate directed measures, information decomposition among a set of stimulus/responses variables and the relation between interventional and observational causality. Applications to neural data sets and pointers to open source software highlight the usefulness of these measures in experimental neuroscience. With state-of-the-art mathematical developments, computational techniques and applications to real data sets, this book will be of benefit to all graduate students and researchers interested in detecting and understanding the information transfer between components of complex systems. Downloads of individual chapters (requires Springer access) via: http://link.springer.com/book/10.1007%2F978-3-642-54474-3 Contents: Section 1 - Introduction to Directed Information Measures Chapter 1. "Transfer Entropy in Neuroscience", Michael Wibral, Raul Vicente, Michael Lindner -- http://link.springer.com/chapter/10.1007/978-3-642-54474-3_1 Chapter 2. "Efficient Estimation of Information Transfer", Raul Vicente, Michael Wibral -- http://link.springer.com/chapter/10.1007/978-3-642-54474-3_2 Section 2 - Information Transfer in Neural and Other Physiological Systems Chapter 3. "Conditional Entropy-Based Evaluation of Information Dynamics in Physiological Systems", Luca Faes, Alberto Porta -- http://link.springer.com/chapter/10.1007/978-3-642-54474-3_3 Chapter 4. "Information Transfer in the Brain: Insights from a Unified Approach", Daniele Marinazzo, Guorong Wu, Mario Pellicoro, Sebastiano Stramaglia -- http://link.springer.com/chapter/10.1007/978-3-642-54474-3_4 Chapter 5. "Function Follows Dynamics: State-Dependency of Directed Functional Influences", Demian Battaglia -- http://link.springer.com/chapter/10.1007/978-3-642-54474-3_5 Chapter 6. "On Complexity and Phase Effects in Reconstructing the Directionality of Coupling in Non-linear Systems", Vasily A. Vakorin, Olga Krakovska, Anthony R. McIntosh -- http://link.springer.com/chapter/10.1007/978-3-642-54474-3_6 Section 3 - Recent Advances in the Analysis of Information Processing Chapter 7. "Measuring the Dynamics of Information Processing on a Local Scale in Time and Space", Joseph T. Lizier -- http://link.springer.com/chapter/10.1007/978-3-642-54474-3_7 Chapter 8. "Parametric and Non-parametric Criteria for Causal Inference from Time-Series", Daniel Chicharro -- http://link.springer.com/chapter/10.1007/978-3-642-54474-3_8 Amazon link: http://www.amazon.com/gp/product/3642544738/ref=as_li_ss_tl?ie=UTF8&camp=17… Regards, Michael Wibral, Raul Vicente and Joseph Lizier

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Decision Making Bristol 2014: Abstract Submission deadline EXTENDED to 7 April 2014
by DMB 2014 Mailbox March 31, 2014

March 31, 2014

***The Deadline for submission of abstracts to the Decision Making Bristol 2014 conference has been extended to 7 April 2014.*** *Decision Making Bristol 2014* The Decision-making Group at the University of Bristol invites you to submit abstracts to our second conference - Decision Making Bristol 2014<http://www.bris.ac.uk/decisions-research/conference2014/> - to be held 9-12 September 2014. Following the success of the 2012 conference, this conference aims to embrace a breadth of research, appealing to those interested in all aspects of decision making. We are pleased to announce that the following Key Note speakers have been secured Gerd Gigerenzer<http://www.mpib-berlin.mpg.de/en/staff/gerd-gigerenzer> , Tom Griffiths <http://psychology.berkeley.edu/people/tom-griffiths>, Antonio Rangel <http://www.rnl.caltech.edu/index.html> and Jeffrey D. Schall<http://www.vanderbilt.edu/psychological_sciences/bio/jeffrey-schall>. These will be accompanied by invited talks from Nick Chater<http://www.wbs.ac.uk/about/person/nick-chater/> , Eric-Jan Wagenmakers <http://www.ejwagenmakers.com/> and Daniel Wolpert<http://learning.eng.cam.ac.uk/Public/Wolpert/Wolpert> . Held in the beautiful city of Bristol, at one of the UK's leading science and discovery centres, At-Bristol <http://www.at-bristol.org.uk/>, the conference will promote interdisciplinary collaborations and welcomes attendance from both theoreticians and experimentalists. The *call for short abstracts *(500 words) is now *OPEN *and we invite you to submit your abstract to the following email address: DMB-2014(a)bristol.ac.uk. The closing date for receipt is now *****7 April 2014**.* *Further information and Registration: * http://www.bris.ac.uk/decisions-research/conference2014/ . Registration closing date is 30 June 2014. Please feel free to share this email with your colleagues and research students. We look forward to seeing you in September. Best wishes, Sally-Ann Parry, *on behalf of the Decision-making Group* -- *Decision Making Bristol 2014, * *9- 12 September* e: DMB-2014(a)bristol.ac.uk w: http://www.bris.ac.uk/decisions-research/conference2014/ w: http://www.bris.ac.uk/decisions-research/ a: University of Bristol, 5 Priory Road, Bristol, BS8 1TZ

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PhD position available at the School of Engineering, University of Lincoln
by Basabdatta Sen Bhattacharya March 31, 2014

March 31, 2014

A fully funded PhD is available at the School of Engineering, University of Lincoln, United Kingdom, to work under the supervision of Dr. Basabdatta Bhattacharya <http://staff.lincoln.ac.uk/bbhattacharya> and Prof. Timothy Gordon <http://staff.lincoln.ac.uk/tgordon>. The details and how to apply are available at: https://sites.google.com/site/bsenbhattacharya/phd/fully-fundedphdstudentsh… The *Deadline* for Application is *18th April 2014.* For informal enquiries please contact Basabdatta Sen Bhattacharya at bbhattacharya(a)lincoln.ac.uk or at basab(a)ieee.org. A link to the advert on the University website is available at the link below; scroll down to the heading 'College of Science': http://www.lincoln.ac.uk/home/studyatlincoln/postgraduateprogrammes/postgra… *Note:* The *full funding* is for UK/EU students *only*. International students would need to provide the difference in fees as appropriate. --------------------------------------------------------------- Basabdatta Sen Bhattacharya, PhD Lecturer, School of Engineering ENG 321, Engineering Hub University of Lincoln Brayford Pool, Lincoln LN6 7TS United Kingdom Telephone: +44(0)1522837947 *http://staff.lincoln.ac.uk/bbhattacharya <http://staff.lincoln.ac.uk/bbhattacharya>* Personal page: https://sites.google.com/site/bsenbhattacharya

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application deadline extended till Apr 14 for international summer school: CAMP@Bangalore
by Aditya Gilra March 29, 2014

March 29, 2014

The deadline for applying to the international summer school: Computational Approaches to Memory and Plasticity, CAMP@Bangalore 2014<http://www.ncbs.res.in/camp/>is extended to 14th April, 2014. Please download the poster <http://www.ncbs.res.in/camp/content/poster> and circulate widely. Details follow ... Computational Approaches to Memory and Plasticity (CAMP @ Bangalore) 2014<http://www.ncbs.res.in/camp> . Website: http://www.ncbs.res.in/camp/ Venue: National Centre for Biological Sciences, Bangalore, India<http://www.ncbs.res.in/> Dates: 28th June to 12th July, 2014 Organizer: Upinder Bhalla (NCBS, Bangalore, India)<http://www.ncbs.res.in/bhalla> CAMP @ Bangalore is a 15-day summer school on the theory and simulation of learning, memory and plasticity in the brain. PhD students and post-docs from theoretical and/or experimental backgrounds (physics, math, neuroscience, engineering, etc.) are welcome. Familiarity with programming, dynamical systems, and/or computational neuroscience is highly desirable. Master's or Bachelor's degree students can apply if they have sufficient background beyond course-work. The school will start with remedial tutorials on neuroscience / math / programming and then work upwards from sub-cellular electrical and chemical signaling in neurons, onward to micro-circuits and networks, all with an emphasis on learning, memory and plasticity. Students worldwide are encouraged to apply online at www.ncbs.res.in/camp latest by 14th Apr, 2014. Lecturers: Sumantra Chattarji (NCBS, Bangalore) <http://www.ncbs.res.in/shona>, Xiao-Jing Wang (New York University, New York)<http://www.cns.nyu.edu/wanglab/> , Suhita Nadkarni (Indian Institute of Science Education and Research, Pune)<http://www.iiserpune.ac.in/~suhita/Suhita/Home.html> , Claudia Clopath (Imperial College, London)<http://www.bg.ic.ac.uk/research/c.clopath/> , Eve Marder (Brandeis University, Waltham/Boston)<http://blogs.brandeis.edu/marderlab/> , Rishikesh Narayanan (Indian Institute of Science, Bangalore)<http://mbu.iisc.ernet.in/~rngrp/> , Arthur Wingfield (Brandeis University, Waltham/Boston)<http://www.bio.brandeis.edu/faculty/wingfield.html> , Michael Hausser (University College, London)<http://www.ucl.ac.uk/WIBR/research/neuro/mh/index.htm> , Arvind Kumar (Bernstein Center, Freiburg)<http://www.bcf.uni-freiburg.de/people/details/kumar> , Stefano Fusi (Columbia University, New York)<http://neurotheory.columbia.edu/stefano.html> , Raghav Rajan (Indian Institute of Science Education and Research, Pune)<http://www.iiserpune.ac.in/~raghav/> For more information, email camp2014(a)ncbs.res.in Best Regards, Aditya. ---- Aditya Gilra, Prof Upinder S Bhalla's lab, National Centre for Biological Sciences, Tata Institute of Fundamental Research, GKVK, Bellary Road, Bangalore - 560065, India. Ph: 91-80-23666507.

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Post-doc - Detailed Neuronal Modeling - Blue Brain Project, Lausanne, Switzerland
by emuller March 28, 2014

March 28, 2014

Dear comp-neuro community, I wish to draw your attention to an opening for a post-doctoral researcher in "Detailed Neuron Modeling and Dendritic Integration" (full advert below), at the Blue Brain Project, EPFL, Lausanne, Switzerland. For more details, and instructions how to apply, see: http://emploi.epfl.ch/page-106385-en.html Best regards, Eilif ------------- Dr. Eilif Muller Section Manager - In Silico Neuroscience - Experimentation EPFL - Blue Brain Project QIJ 3ème étage CH-1015 Lausanne Switzerland Tel: ++41 21 693 0698 Fax: ++41 21 693 5350 www: http://bluebrain.epfl.ch/page-77926-en.html www: http://neuralensemble.org/people/eilifmuller ------------------------------------------------------------------------------------- The Blue Brain Project, led by Prof. Henry Markram, seeks outstanding candidates for the position of: Post-doctoral Researcher in Detailed Neuron Modeling and Dendritic Integration The primary objectives for this position are to strengthen on-going large-scale detailed neuron modeling and validation efforts in the project, and to undertake original scientific research to characterize the role of single cell and dendritic integration mechanisms in computation and dynamics at the network level. Scientific leadership is expected to supervise computational neuroscience students, as is an intimate knowledge of the employed software in order to interface with engineering teams. The position is in close contact with an electrophysiology lab and modeling will go hand in hand with available and newly acquired experimental data. Detailed Requirements: * PhD in neuroscience, computational neuroscience, physics or related field * expert in NEURON and multi-compartment conductance-based modeling as demonstrated by strong publication record * expert in automated neuron model optimization techniques * expert knowledge of whole cell electrophysiology, ion channel experiments * expert of scientific computing (python, scipy, numpy, hdf5, matplotlib, Linux, etc.) * knowledge of other programming languages (C++) and parallel computing is of advantage * familiarity with model description languages (e.g. NeuroML) * experience in supervision of students and teaching * strong team player * fluent English in speech and writing What we offer: * An internationally visible project in simulation-based research in neuroscience having a leading role in the EU FET flagship “Human Brain Project” * A vibrant, dynamic, inter-disciplinary, and international working environment * Very competitive salary Start date: 1 June 2014. Deadline for application: open until position is filled. Activity rate: 100%. Duration of contract: 1 year, renewable. For more details, and instructions how to apply, see: http://emploi.epfl.ch/page-106385-en.html

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