INCF/OCNS Software WG session on NetPyNE (4th April: 1600 UTC)
Dear all, Apologies for the cross post. Please join us for the next INCF/OCNS Software working group "dev session" where Joe Graham will speak to us about NetPyNE: https://ocns.github.io/SoftwareWG/2022/04/04/dev-session-joe-graham-netpyne.... - Date: April 4, 2022, 1600 UTC (Click here[1] to see your local time). - Location (Zoom): (login to Zoom required): https://ucl.zoom.us/j/99620419452?pwd=SkZlQnJmWWZVczNURkp2azVOZkhzUT09 Abstract: NetPyNE is an open-source Python package to facilitate the development, parallel simulation, analysis, and optimization of biological neuronal networks using the NEURON simulator. The NetPyNE GUI is available from a variety of resources: Neuroscience Gateway Portal (NSG); Open Source Brain (OSB) ; Human Brain Project (HBP) EBRAINS; and the NIH SPARC initiative. The NetPyNE source code is available on GitHub. More information is available on the NetPyNE website. During this dev session, I will give an overview of NetPyNE, go through an interactive demo using the NetPyNE GUI, describe my personal development workflow using virtual environments, and then go through two big dev projects I worked on: (1) documenting code inline and online using docstrings, Sphinx, Napoleon, and autodocsumm, and (2) separating and standardizing analysis and plotting. --------- The aim of these sessions is to stimulate discussion of the development practices and tools used by different teams to improve the software we use while also improving our knowledge of these practices and tools. We also hope to encourage more users of these tools to contribute to their development to ensure their longevity. If you develop software for neuroscience, we would love to hear about your development pipeline. Please get in touch with the Software WG on our GitHub repository[3]. The WG is a community based group that is open to everyone at all levels of their careers (academic or otherwise). Please introduce yourself to the community on our channels to get involved. [1] https://www.timeanddate.com/worldclock/fixedtime.html?msg=Dev+session%3A+Joe+Graham%3A+NetPyNE&iso=20220404T16&p1=1440 [2] https://github.com/OCNS/SoftwareWG/issues -- Thanks, Regards, Ankur Sinha (He / Him / His) | https://ankursinha.in Research Fellow at the Silver Lab, University College London | http://silverlab.org/ Free/Open source community volunteer at the NeuroFedora project | https://neuro.fedoraproject.org Time zone: Europe/London
participants (1)
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Ankur Sinha